prot_P-lacustris_contig1064.587.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig1064.587.1
Unique Name	prot_P-lacustris_contig1064.587.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	102

Homology

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BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot
Match: D7FYT5_ECTSI (40S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT5_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.510e-60
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0

Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEKESIDIDPDTKDLLDALDFKDLAGIAVSAVPQRV 101
            MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIE+ESIDIDPDTKDLLDALDFKDLAGIAVSAVP RV
Sbjct:   25 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPRV 125

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BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot
Match: A0A836CIS9_9STRA (40S ribosomal protein S17 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS9_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.010e-51
Identity = 86/100 (86.00%), Postives = 95/100 (95.00%), Query Frame = 0

Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEKESIDIDPDTKDLLDALDFKDLAGIAVSAVPQR 100
            +DFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERR+DFVPEVSAIE+E I+IDPDTK+LLDALDFKD+  +++ A PQR
Sbjct:   25 LDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQERIEIDPDTKELLDALDFKDIPNLSIVA-PQR 123

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BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot
Match: F0Y4Q4_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y4Q4_AURAN)

HSP 1 Score: 165 bits (417), Expect = 7.810e-51
Identity = 82/95 (86.32%), Postives = 92/95 (96.84%), Query Frame = 0

Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEKESIDIDPDTKDLLDALDFKDLAGIAVS 95
            +DFHTNKRVCDEVA++PSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAI+++ ++IDPDTK++LDALDFKDL GI VS
Sbjct:   25 VDFHTNKRVCDEVAVVPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIDQDFVEIDPDTKEMLDALDFKDLPGIQVS 119

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BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot
Match: A0A7S4SMK2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SMK2_9DINO)

HSP 1 Score: 163 bits (413), Expect = 4.090e-50
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 0

Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEKESIDIDPDTKDLLDALDFKDLAGIAVSA 96
            +DFHTNKRVCDEVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSA+++E I++DP TK +LDALDFKDL G+ VSA
Sbjct:   35 LDFHTNKRVCDEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSALDQEVIEVDPQTKAMLDALDFKDLPGVQVSA 130

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BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot
Match: A0A1E7EU86_9STRA (Ribosomal protein S17 component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU86_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.330e-44
Identity = 72/100 (72.00%), Postives = 90/100 (90.00%), Query Frame = 0

Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEKESIDIDPDTKDLLDALDFKDLAGIAVSAVPQR 100
            +DFHTNKR+ DEVAI+PSKRMRNKIAG+ THLM+RI +GPVRGISLKLQEEERERR+DFVPEVSA+E+++I IDPDT+D+L++L F  L G+AV++ P R
Sbjct:   25 LDFHTNKRIVDEVAILPSKRMRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQDTITIDPDTRDMLESLGFGSLNGVAVNSGPHR 124

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BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot
Match: A0A7I8VIK1_9ANNE (40S ribosomal protein S17 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VIK1_9ANNE)

HSP 1 Score: 145 bits (367), Expect = 5.130e-43
Identity = 74/101 (73.27%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEKESIDIDPDTKDLLDALDFKDLAGIAVSAVPQRV 101
            +DFHTNKR+C+E+AIIPSKR+RNKIAGFVTHLMKRIQRGPVRGIS+KLQEEERERR ++VPEVSAIE++ IDIDPDTK++L  LD  +L  I V    Q V
Sbjct:   26 LDFHTNKRICEEIAIIPSKRLRNKIAGFVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSAIEQDVIDIDPDTKEMLKMLDMANLPRIQVQTQNQNV 126

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BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot
Match: A0A482RVV4_9ARCH (40S ribosomal protein S17 (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVV4_9ARCH)

HSP 1 Score: 145 bits (365), Expect = 6.320e-43
Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 0

Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEKESIDIDPDTKDLLDALDFKDLAGIAVS 95
            +DFHTNKR+  EVAIIPSKRMRNKIAGF+THLMKRIQ+GPVRGISLKLQEEERE RMDFVPE SAI+K+ I +D DTK +LDAL+FKDL G+ V+
Sbjct:   21 LDFHTNKRITGEVAIIPSKRMRNKIAGFITHLMKRIQKGPVRGISLKLQEEEREARMDFVPERSAIDKDEILVDSDTKAMLDALNFKDLVGVRVA 115

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BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot
Match: A0A7J7IQE7_9RHOD (40S ribosomal protein S17 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IQE7_9RHOD)

HSP 1 Score: 145 bits (366), Expect = 6.440e-43
Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 0

Query:    2 DFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEKESIDIDPDTKDLLDALDFKDLAGIAVSAVPQR 100
            DFHTNKRVCDEVAI+PSKRMRNK+AGF+THLMKRIQRGPVRGISLKLQEEERERRMDFVP+VSA+  E+I++DPDTK +L ++    L G+ V    +R
Sbjct:   28 DFHTNKRVCDEVAILPSKRMRNKVAGFITHLMKRIQRGPVRGISLKLQEEERERRMDFVPDVSAVNTENIEVDPDTKAMLRSIGLGSLPGVIVVQPGER 126

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BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot
Match: A0A7I8VSZ6_9ANNE (40S ribosomal protein S17 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VSZ6_9ANNE)

HSP 1 Score: 145 bits (365), Expect = 9.150e-43
Identity = 72/101 (71.29%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEKESIDIDPDTKDLLDALDFKDLAGIAVSAVPQRV 101
            MDFHTNKR+C+E+AIIPSKR+RNKI+GFVTHLMKRIQRGPVRGIS+KLQEEERERR ++VP+VSA+E++ IDIDPDTKD+L  LD  +L  + V    Q V
Sbjct:   26 MDFHTNKRICEEIAIIPSKRLRNKISGFVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPDVSALEQDVIDIDPDTKDMLKMLDMANLPKVQVQTSSQTV 126

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BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot
Match: Q8ISP1_BRABE (40S ribosomal protein S17 n=4 Tax=Branchiostoma TaxID=7737 RepID=Q8ISP1_BRABE)

HSP 1 Score: 145 bits (365), Expect = 9.430e-43
Identity = 68/95 (71.58%), Postives = 90/95 (94.74%), Query Frame = 0

Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEKESIDIDPDTKDLLDALDFKDLAGIAVS 95
            +DFHTNKR+C+E+AIIPSK++RNK+AGFVTHLMKRIQRGPVRGIS+KLQEEERERR ++VPEVSAI+++ I++DPDTK++L ALDF +++G+ V+
Sbjct:   26 LDFHTNKRICEEIAIIPSKKLRNKVAGFVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSAIDQDIIEVDPDTKEMLKALDFGNISGLQVT 120

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig1064.587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FYT5_ECTSI	1.510e-60	98.02	40S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID...	[more]
A0A836CIS9_9STRA	1.010e-51	86.00	40S ribosomal protein S17 n=2 Tax=Tribonema minus ...	[more]
F0Y4Q4_AURAN	7.810e-51	86.32	Uncharacterized protein n=2 Tax=Pelagomonadales Ta...	[more]
A0A7S4SMK2_9DINO	4.090e-50	85.42	Hypothetical protein (Fragment) n=1 Tax=Alexandriu...	[more]
A0A1E7EU86_9STRA	4.330e-44	72.00	Ribosomal protein S17 component of cytosolic 80S r...	[more]
A0A7I8VIK1_9ANNE	5.130e-43	73.27	40S ribosomal protein S17 n=1 Tax=Dimorphilus gyro...	[more]
A0A482RVV4_9ARCH	6.320e-43	77.89	40S ribosomal protein S17 (Fragment) n=1 Tax=archa...	[more]
A0A7J7IQE7_9RHOD	6.440e-43	72.73	40S ribosomal protein S17 n=2 Tax=Cyanidiaceae Tax...	[more]
A0A7I8VSZ6_9ANNE	9.150e-43	71.29	40S ribosomal protein S17 n=1 Tax=Dimorphilus gyro...	[more]
Q8ISP1_BRABE	9.430e-43	71.58	40S ribosomal protein S17 n=4 Tax=Branchiostoma Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001210	Ribosomal protein S17e	PFAM	PF00833	Ribosomal_S17e	coord: 2..94 e-value: 2.4E-47 score: 159.8
IPR001210	Ribosomal protein S17e	PANTHER	PTHR10732	40S RIBOSOMAL PROTEIN S17	coord: 2..94
IPR036401	Ribosomal protein S17e-like superfamily	GENE3D	1.10.60.20		coord: 1..37 e-value: 2.5E-20 score: 73.9
IPR036401	Ribosomal protein S17e-like superfamily	SUPERFAMILY	116820	Rps17e-like	coord: 2..37
IPR018273	Ribosomal protein S17e, conserved site	PROSITE	PS00712	RIBOSOMAL_S17E	coord: 16..31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig1064	contig	P-lacustris_contig1064:60926..63766 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig1064.587.1	mRNA_P-lacustris_contig1064.587.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig1064 60926..63766 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig1064.587.1 ID=prot_P-lacustris_contig1064.587.1|Name=mRNA_P-lacustris_contig1064.587.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=102bp
MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQE
EERERRMDFVPEVSAIEKESIDIDPDTKDLLDALDFKDLAGIAVSAVPQR
V*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001210	Ribosomal_S17e
IPR036401	RPS17e-like_sf
IPR018273	Ribosomal_S17e_CS