prot_P-lacustris_contig1063.578.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1063.578.1
Unique Nameprot_P-lacustris_contig1063.578.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length262
Homology
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BLAST of mRNA_P-lacustris_contig1063.578.1 vs. uniprot
Match: D7FUG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUG5_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 3.810e-37
Identity = 65/101 (64.36%), Postives = 79/101 (78.22%), Query Frame = 0 
Query:  161 ISTQLSQKTQEACDVLIEKFMVTANKDNEGISVHRTKLIDLCSTDGDIVRYLLGPNTQDSKKRVANKFKVLANLTSSPGSKSQLYSHNEGFEYSLYFVLRE 261
            +ST+L++ T+E CD  +EK M  A+KD+EG+ VHRTKLIDLC TDGD+  YLLGPN Q S +RVA KFKVLA+ TS PGS+ QLYSH E  EYS YF+LRE
Sbjct:    1 MSTKLNKTTKETCDASVEKLMAVAHKDDEGVWVHRTKLIDLCCTDGDLTNYLLGPNAQCSPRRVAKKFKVLADFTSWPGSRCQLYSHTEDLEYSRYFILRE 101
[Close]
BLAST of mRNA_P-lacustris_contig1063.578.1 vs. uniprot
Match: D7FUG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUG4_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 6.540e-15
Identity = 66/134 (49.25%), Postives = 73/134 (54.48%), Query Frame = 0 
Query:   16 HRGRASSSADPAVRSYDTEEAAAVAVTTAAASFVPAQCVSSSXXXQSLASSATASRVLPS--------------RISMPTSPSPPPIKTEVEDQXXXDSDKDESILWRRYPKRAKVTAPDQPQPLGFRHEFDWQ 135
            H   A S    A  SYD EEAAAV V  AAASF PAQC+ S    Q+L  SA A+  +PS              R    T P+P  IKTE   Q   DS   E    RRYPKRA+VTAPD  QP+GFRHEFDWQ
Sbjct:  162 HLETALSWTSSATWSYDAEEAAAV-VAAAAASFRPAQCLGSFPKAQAL--SAPAATTVPSSSPLEVRGVSPAPARTPSSTPPAPTAIKTEDGVQDSHDSGMQEPKP-RRYPKRARVTAPDDAQPVGFRHEFDWQ 291
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1063.578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUG5_ECTSI3.810e-3764.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUG4_ECTSI6.540e-1549.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1063contigP-lacustris_contig1063:52850..54780 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1063.578.1mRNA_P-lacustris_contig1063.578.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1063 51990..56942 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1063.578.1 ID=prot_P-lacustris_contig1063.578.1|Name=mRNA_P-lacustris_contig1063.578.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=262bp
MLGPPIAHPAAGLQNHRGRASSSADPAVRSYDTEEAAAVAVTTAAASFVP
AQCVSSSSSSQSLASSATASRVLPSRISMPTSPSPPPIKTEVEDQDAEDS
DKDESILWRRYPKRAKVTAPDQPQPLGFRHEFDWQTAENMVLVPIMLHGT
SEQQNGARDFISTQLSQKTQEACDVLIEKFMVTANKDNEGISVHRTKLID
LCSTDGDIVRYLLGPNTQDSKKRVANKFKVLANLTSSPGSKSQLYSHNEG
FEYSLYFVLRE*
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