prot_P-lacustris_contig1059.534.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1059.534.1
Unique Nameprot_P-lacustris_contig1059.534.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length142
Homology
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BLAST of mRNA_P-lacustris_contig1059.534.1 vs. uniprot
Match: D8LCD9_ECTSI (Bap31 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCD9_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 6.420e-85
Identity = 125/141 (88.65%), Postives = 135/141 (95.74%), Query Frame = 0 
Query:    1 MASNNLWPLLIKIIFPVPASFLLLVCLPLSTHGRIMRWMRKLFDKIFSFRVMGVPLIYLIMVSSCALFAAMCLETYGLRVREVNAVHFDEKMNLRGRRWRAERNFYISFMFLSCSVLANRVRLMLKEMDSLNEQIKEMRRR 141
            MASNNLWPLLIKIIFP+PASFLLL+CLPLST  RIMRW R+L+DKIFSF+VM +PLIYLIM +SCALFAAMCLETYGLRVREVNA HFDEKMNLRGRRWRAERNFYISFMFLSCSVLANRVRLMLKE+DSLNEQI+EMR+R
Sbjct:    1 MASNNLWPLLIKIIFPIPASFLLLICLPLSTQSRIMRWTRRLYDKIFSFQVMSIPLIYLIMAASCALFAAMCLETYGLRVREVNATHFDEKMNLRGRRWRAERNFYISFMFLSCSVLANRVRLMLKEVDSLNEQIREMRKR 141
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BLAST of mRNA_P-lacustris_contig1059.534.1 vs. uniprot
Match: W7TBU6_9STRA (Bap31 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBU6_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 5.050e-8
Identity = 41/141 (29.08%), Postives = 71/141 (50.35%), Query Frame = 0 
Query:    2 ASNNLWPLLIKIIFPVPASFLLLVCLPLSTHGR------IMRWMRKLFDKIFSFRVMGVPLIYLIMVSSCALFAAMCLETYGLRVREVNAVHFDEKMNLRGRRWRAERNFYISFMFLSCSVLANRVRLMLKEMDSLNEQIK 136
            + +N W L +  IFP+P  FL+L+ LP     R      I+  + ++    F +    + LI +I++ +         ++   R  E  A  F EK  LR +RWRAERNF++S +     V+  R++ +L ++  L E++K
Sbjct:   45 SGSNPWQLFLYFIFPIPLVFLVLISLPFPARYRAKIRVGILNALNRISFLRFDYGGASISLIAIIILIALLGLIFSANDSLNARRAENQAHFFAEKKELRCKRWRAERNFWLSVLGCVLWVVLLRIQTLLMDVGPLEERLK 185
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BLAST of mRNA_P-lacustris_contig1059.534.1 vs. uniprot
Match: I0Z7B1_COCSC (Bap31 domain-containing protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z7B1_COCSC)

HSP 1 Score: 51.2 bits (121), Expect = 3.130e-5
Identity = 39/140 (27.86%), Postives = 71/140 (50.71%), Query Frame = 0 
Query:    5 NLWPLLIKIIFPVPASFLLLVCLPLSTHGRIMRWMRKLFDKIFSFRVMG--VPLIYLIMVSSCALFAAMCLETYGLRVREVNAVHFDEKM---NLRGRRWRAERNFYISFMFLSCSVLANRVRLMLKEMDSLNEQIKEMR 139
            +LW ++++I  P+P   L L+C P        R + K+ D      ++G  + L++ ++V S A   A    TY L+ ++++       +   NL G+RWRAERNF+I+F+  +   L  R   +LK    + + +  +R
Sbjct:    2 SLWKMVVEICLPIPIVLLALLCFPAPRVFH--RGVLKVVDSTLGINLVGNVLSLLHFMLVVSGAALLATIRTTYQLKDQKLDPSSVTPNVLSANL-GKRWRAERNFWIAFITFTLWCLLARFYQILKHKAEVEDSLARLR 138
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1059.534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCD9_ECTSI6.420e-8588.65Bap31 domain-containing protein n=2 Tax=Ectocarpus... [more]
W7TBU6_9STRA5.050e-829.08Bap31 domain-containing protein n=2 Tax=Monodopsid... [more]
I0Z7B1_COCSC3.130e-527.86Bap31 domain-containing protein n=2 Tax=Coccomyxa ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 72..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..71
NoneNo IPR availableTMHMMTMhelixcoord: 105..124
NoneNo IPR availableTMHMMTMhelixcoord: 9..31
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
IPR040463BAP29/BAP31, transmembrane domainPFAMPF05529Bap31coord: 20..137
e-value: 1.3E-7
score: 31.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1059contigP-lacustris_contig1059:32356..36926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1059.534.1mRNA_P-lacustris_contig1059.534.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1059 32356..36926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1059.534.1 ID=prot_P-lacustris_contig1059.534.1|Name=mRNA_P-lacustris_contig1059.534.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=142bp
MASNNLWPLLIKIIFPVPASFLLLVCLPLSTHGRIMRWMRKLFDKIFSFR
VMGVPLIYLIMVSSCALFAAMCLETYGLRVREVNAVHFDEKMNLRGRRWR
AERNFYISFMFLSCSVLANRVRLMLKEMDSLNEQIKEMRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040463BAP29/BAP31_N