prot_P-lacustris_contig1057.528.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1057.528.1
Unique Nameprot_P-lacustris_contig1057.528.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length400
Homology
[Close]
BLAST of mRNA_P-lacustris_contig1057.528.1 vs. uniprot
Match: D8LJZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ6_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 1.490e-53
Identity = 150/236 (63.56%), Postives = 164/236 (69.49%), Query Frame = 0 
Query:   82 MDVIEDVMPRLAAKARARAVGGGGRGGGTAAENGHATAIEKIQSFFDSVKAKRELKAPEGRVLWRGRRTGLLIDSAKVAKDDDGLDNIASFFDSARVGRSSA---TTPSSITGFSSVSPGSASSSAWTGGRPSSSPEIDD-SXXXXXXXXXXXXXXXXXXXXXXXXDATETEDDGMGVGNGGD-----GGEEDFGDEVLRGRQLDYPPAKRTNAGAVASA---RSDVSTDEELAAV 305
            M+ IED MPRLAAKARARA           AENGHA A EKI+SFFDS+KAKREL A EG+VLWRGRRTGLLID  +VAKD DG DNIASFFDSAR+G +SA   TTPSS+ GFS+VSPGSA+SSAWT GRP S    DD S         XXXXXXXXXXXXX  D  +TE                G EEDFG+E LRGRQLDYPPAK    GA A+A   RS+VSTDEELAAV
Sbjct:    1 MEAIEDAMPRLAAKARARAXXXXXX---XXAENGHAAAKEKIESFFDSMKAKRELDASEGKVLWRGRRTGLLIDGTQVAKDADGFDNIASFFDSARIGDASAGASTTPSSV-GFSTVSPGSAASSAWTAGRPPSPLGADDESHDEGNDMSNXXXXXXXXXXXXXIDDGDDTEXXXXXXXXXXXXXXXXGEEEDFGEEALRGRQLDYPPAKTPKKGAAAAAAVARSEVSTDEELAAV 232
[Close]
BLAST of mRNA_P-lacustris_contig1057.528.1 vs. uniprot
Match: A0A6H5KZX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZX0_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 4.270e-48
Identity = 160/261 (61.30%), Postives = 175/261 (67.05%), Query Frame = 0 
Query:   82 MDVIEDVMPRLAAKARARAVGGGGRGGGTAAENGHATAIEKIQSFFDSVKAKRELKAPEGRVLWRGRRTGLLIDSAKVAKDDDGLDNIASFFDSARVGRSSA---TTPSSITGFSSVSPGSASSSAWTGGRPSSSPEIDDSXXXXXXXXXXXXXXXXXXXXXXXX-----DATETEDDGMGVGNGGD---GGEEDFGDEVLRGRQLDYPPAKRTNAGAVAS----ARSDVSTDEELAAVAVAATAPAEGGVRQGGSAAVEG 327
            M+ IED MPRLAAKARARA           AENGHA A EKI+SFF+S+KAKREL A EG+VLWRGRRTGLLID  +VAKD DG DNIASFFDSAR+  +SA   TTPSS+ GFS+VSPGSA+SSAWT GRP S       XXXXXXXXXXXXXXXXXXXXXXXX     D TET    M          G EEDFG+E LRGRQLDYPPAK     A       ARS+VSTDEELAAV         G V + G    +G
Sbjct:    1 MEAIEDAMPRLAAKARARAX----XXXXXXAENGHAAAKEKIESFFNSMKAKRELDASEGKVLWRGRRTGLLIDGTQVAKDADGFDNIASFFDSARIDDASAGASTTPSSV-GFSTVSPGSAASSAWTAGRPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDGDDTETXXXXMXXXXXXXXXXGEEEDFGEEALRGRQLDYPPAKTPKKVAXXXXXXXARSEVSTDEELAAVPAGRRGGGRGRVDEDGDTEPDG 256
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1057.528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJZ6_ECTSI1.490e-5363.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZX0_9PHAE4.270e-4861.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1057contigP-lacustris_contig1057:67192..71891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1057.528.1mRNA_P-lacustris_contig1057.528.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1057 61679..71891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1057.528.1 ID=prot_P-lacustris_contig1057.528.1|Name=mRNA_P-lacustris_contig1057.528.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=400bp
CGPARLFPVATPYHWGSEYQACLIRNYTTVERPLSRGEATAPTRQCIDRD
LAEELSPKRTGALGAKRPNGGLRCCRRAVWTMDVIEDVMPRLAAKARARA
VGGGGRGGGTAAENGHATAIEKIQSFFDSVKAKRELKAPEGRVLWRGRRT
GLLIDSAKVAKDDDGLDNIASFFDSARVGRSSATTPSSITGFSSVSPGSA
SSSAWTGGRPSSSPEIDDSDDEGNSKNAEGGVDGVDGIDGVDGDATETED
DGMGVGNGGDGGEEDFGDEVLRGRQLDYPPAKRTNAGAVASARSDVSTDE
ELAAVAVAATAPAEGGVRQGGSAAVEGSDDDGDTESEGRPPRKPQQQQQQ
QQQQEENGTGPSKSGSKPNSSSSSVFAIASEEGGNHRVGRHADAEEGFE*
back to top