prot_P-lacustris_contig1057.523.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1057.523.1
Unique Nameprot_P-lacustris_contig1057.523.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length192
Homology
BLAST of mRNA_P-lacustris_contig1057.523.1 vs. uniprot
Match: D8LJZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ9_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 1.430e-71
Identity = 133/194 (68.56%), Postives = 144/194 (74.23%), Query Frame = 0
Query:   10 MARSSWIALLVSVSFAVSDAFVSPRVRWVPA----RQEGMRSPTVPATARFLSTTARAATTSDDDATVTTP-----EPA-SAVPEDLDYYSGLIGQQP-SDNAVTSG-EESASVSDYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPSFLFLFYAAIKKGQAEVEEDDAKFRQGRW 191
            M R S IALLV V+F VSDAFVSP+ RW  A     +   RS T P  AR  STT R A T               EPA SAVPEDLDYYSGLIG+QP +D A  SG EE+ + SDYPIPLPSYLLL LATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLP+F+FLFYAAIKKG+AEVEEDDAKF +GRW
Sbjct:    1 MTRLSIIALLVLVTFVVSDAFVSPKARWASAAINTNRHQARSLTTPVAARVRSTTVRTAATXXXXXXXXXXXXXPAEPAKSAVPEDLDYYSGLIGEQPGADKAPASGKEEAVTTSDYPIPLPSYLLLVLATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPTFIFLFYAAIKKGKAEVEEDDAKFGKGRW 194          
BLAST of mRNA_P-lacustris_contig1057.523.1 vs. uniprot
Match: A0A835YHG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHG1_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.360e-26
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0
Query:  114 YPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPSFLFLFYAAIKKGQAEVEEDDAKF 186
            YPI  P+Y LL+L+TVV+IAF GSIFEV G  P LGY  TYIIG LSLP F+FLFYAAIKKGQAE EEDD  F
Sbjct:   61 YPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDDDDF 133          
BLAST of mRNA_P-lacustris_contig1057.523.1 vs. uniprot
Match: A0A2V3IZS2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZS2_9FLOR)

HSP 1 Score: 82.0 bits (201), Expect = 9.850e-17
Identity = 45/92 (48.91%), Postives = 58/92 (63.04%), Query Frame = 0
Query:   99 DNAVTSGEESASVSDY--------PIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPSFLFLFYAAIKKGQAEVEED 182
            D+  T  ++ A +  Y        PI  PS +LL  ++V++IA  G +FE+TGGHP  G+  T  I T+SLPSFLFLFYAAIKKGQ E  ED
Sbjct:   34 DHVTTHSKKRARIRSYSMTTEPKAPINAPSGVLLLSSSVLAIAAIGCVFELTGGHPTYGFNVTAGILTVSLPSFLFLFYAAIKKGQIEALED 125          
BLAST of mRNA_P-lacustris_contig1057.523.1 vs. uniprot
Match: A0A7S2P364_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P364_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.830e-15
Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 0
Query:  107 ESASVSDYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPSFLFLFYAAIKKGQAEVEEDDAKF 186
            E   +  YPI LPS +LLA + V++I+  GS+FE+ GG P+LG+  T  I  L LP  +FL YAAI KG AE EE D +F
Sbjct:   34 EEEELQAYPIDLPSPILLATSMVLAISSIGSLFELAGGTPKLGFAVTAAITALGLPISVFLIYAAILKGSAETEEADREF 113          
BLAST of mRNA_P-lacustris_contig1057.523.1 vs. uniprot
Match: A0A7S2XVJ4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.070e-15
Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 0
Query:  116 IPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPSFLFLFYAAIKKGQAEVEEDDAKFR 187
            +PLP+YL L ++ VV+IAF G+IFEV+GG P LG+  T+ I   S P FL+LFY ++K+GQ E +ED+  +R
Sbjct:  125 LPLPAYLYLVVSCVVAIAFIGTIFEVSGGKPLLGFPLTWAIMVASGPGFLYLFYCSLKRGQIEEKEDNDTWR 196          
BLAST of mRNA_P-lacustris_contig1057.523.1 vs. uniprot
Match: A0A6T6GAQ8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6GAQ8_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.950e-15
Identity = 36/79 (45.57%), Postives = 56/79 (70.89%), Query Frame = 0
Query:  112 SDYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPSFLFLFYAAIKKGQAEVEEDDAKFRQGR 190
            ++YP+ +PS LLLA + ++ I  TG +FE+TG   +LG+ AT  +  +S+P+ LFLFYA+I K  AE EEDD ++ +G+
Sbjct:  114 TEYPLDVPSPLLLASSMILGIIGTGCVFELTGDAEQLGFAATAALTVVSIPTCLFLFYASILKATAETEEDDRRYMEGK 192          
BLAST of mRNA_P-lacustris_contig1057.523.1 vs. uniprot
Match: A0A7S4JDB9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JDB9_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.070e-14
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 0
Query:  113 DYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPSFLFLFYAAIKKGQAEVEEDDAKF 186
            +YP+ +PS LLL  + +++IA  GSIFE++GG+P  G   T  I  + LP+ LFLFYAAI KG AE EEDD  F
Sbjct:   89 NYPLNVPSPLLLGSSMILAIASIGSIFELSGGNPSNGVGPTAAIAAIGLPTCLFLFYAAIMKGIAETEEDDKAF 162          
BLAST of mRNA_P-lacustris_contig1057.523.1 vs. uniprot
Match: M2XU10_GALSU (Uncharacterized protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XU10_GALSU)

HSP 1 Score: 75.5 bits (184), Expect = 5.920e-14
Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 0
Query:  107 ESASVSDYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPSFLFLFYAAIKKGQAE 178
            + A  S  P+ +PS +LL ++ V++IAF GSIFE++ GHP+ G   T +I   SLPSFLFLFYAAI+KG+ E
Sbjct:   73 KKAPSSKPPLNVPSGILLGVSCVLAIAFVGSIFELSSGHPQYGRELTSVILVSSLPSFLFLFYAAIQKGKDE 144          
BLAST of mRNA_P-lacustris_contig1057.523.1 vs. uniprot
Match: A0A7S0BY63_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY63_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.090e-12
Identity = 41/107 (38.32%), Postives = 60/107 (56.07%), Query Frame = 0
Query:   86 LDYYSGLIGQQPSDNAVTSGEESASVSDYPIPL--PSYLLLALATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPSFLFLFYAAIKKGQAEVEEDDAKFRQGR 190
            L   +G+     S  +  + E+S S     +PL  PS LLL  + +++IA  GS+F++ GG P+LG+  T  I T+     L+ FY AI KG +E EEDD KF + R
Sbjct:   21 LPVRTGIAEGHTSLKSSNNDEDSDSKPQLNVPLNIPSPLLLGSSMILAIAGVGSMFDIAGGSPQLGFPLTESIATVGTTISLYFFYCAILKGISETEEDDEKFNKDR 127          
BLAST of mRNA_P-lacustris_contig1057.523.1 vs. uniprot
Match: A0A7S2Y7X1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y7X1_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.890e-9
Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 0
Query:   79 ASAVPEDLDYYSGLIGQ--QPSDNAVTSGEESASVSDYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPSFLFLFYAAIKKGQAEVEEDDAKFRQG 189
            A   P+D+   +  I Q  Q S  AV + +E     +YP+ +PS +LLA + V++I+ TGS+F    G+         +IG    P FLFL YAAI KG AE +EDD ++  G
Sbjct:   59 APTTPDDVTSLNDTIEQLQQSSPTAVLAEQEDV---EYPLDVPSPVLLASSIVLAISSTGSLFNCIEGNITPVSLGLAVIG---FPLFLFLLYAAILKGAAETKEDDERYLNG 165          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1057.523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LJZ9_ECTSI1.430e-7168.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHG1_9STRA2.360e-2672.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2V3IZS2_9FLOR9.850e-1748.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2P364_9STRA1.830e-1550.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2XVJ4_9STRA4.070e-1551.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6T6GAQ8_9STRA4.950e-1545.57Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S4JDB9_9STRA1.070e-1452.70Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
M2XU10_GALSU5.920e-1452.78Uncharacterized protein n=2 Tax=Galdieria sulphura... [more]
A0A7S0BY63_9STRA1.090e-1238.32Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2Y7X1_9STRA1.890e-938.05Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 140..150
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 173..191
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..120
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.717
NoneNo IPR availableTMHMMTMhelixcoord: 150..172
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1057contigP-lacustris_contig1057:38784..40796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1057.523.1mRNA_P-lacustris_contig1057.523.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1057 38781..42131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1057.523.1 ID=prot_P-lacustris_contig1057.523.1|Name=mRNA_P-lacustris_contig1057.523.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=192bp
MSCFITSATMARSSWIALLVSVSFAVSDAFVSPRVRWVPARQEGMRSPTV
PATARFLSTTARAATTSDDDATVTTPEPASAVPEDLDYYSGLIGQQPSDN
AVTSGEESASVSDYPIPLPSYLLLALATVVSIAFTGSIFEVTGGHPELGY
TATYIIGTLSLPSFLFLFYAAIKKGQAEVEEDDAKFRQGRW*
back to top