prot_P-lacustris_contig1045.452.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1045.452.1
Unique Nameprot_P-lacustris_contig1045.452.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length450
Homology
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BLAST of mRNA_P-lacustris_contig1045.452.1 vs. uniprot
Match: D7FQ90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ90_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 7.280e-61
Identity = 179/406 (44.09%), Postives = 203/406 (50.00%), Query Frame = 0 
Query:   59 KEWKRATEIFDQARYVDRIRPSLQIYGALLGALADGERWGDILIYLDRMVADGVVPDAVATNTAVLAAAELGEGRRALSLLEG-EGMRRRKPEVVVDAGVSRDA---KGGGSDNP-----LSLNRQXXXXXXXXXXE--VLRSGD---------DENVRCDVAGGQ---GEDAGAVALPEWRTCATVRETREQTEEEAGGVGVGGVAVGHGCSSGVGAAVRGSTRTMRDSGSVD-GFAGGWETVTPGLLKSVLRALDETGEDAAVLEAVKRGREKRVLLTPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLWSGDSWSDRNGWGGQEEKSSS------SGAQQRDTSREKQE 434
            KEWKRATEIFDQARYV RIRPSLQIYGALLGALA+GERW D+L+YLDRMVADGV  DA ATNTAVLAAAELG+GRRALSLLEG EG ++R        GV+RD    +GGGSDN      L   R+             VL  G+         +   R   AGG+   GE++   A            TR ++  EA G   G VA  +G       A  G+ RT RDS SVD G  GGWE VTPGLL SVLRALDE  ED+AVLEAVKRGREK +LL  SI                                                                               AGLWSGDSW D  GWG +E+ SSS      S   Q D+S +KQE
Sbjct:  132 KEWKRATEIFDQARYVHRIRPSLQIYGALLGALAEGERWADVLVYLDRMVADGVARDAAATNTAVLAAAELGDGRRALSLLEGGEGSQQRGGR---QRGVARDVVGEEGGGSDNRQLCDGLQRRRRPAGVDEGDGIRGVVLGQGELEGEPEALLERRQRAATAGGEKRHGEESEVRAR-----------TRIRSSSEAAGERQGVVADENGVDE---EAQDGTRRTERDSDSVDDGVGGGWEGVTPGLLNSVLRALDEQDEDSAVLEAVKRGREKGILLNQSIYRCALKACGNLGDYQQANDILVRMAEESLTPDIVHWNHALRASAACARWQETRLRLQEMETFGSTPDEFSYSMALKACSAGLWSGDSWCDSRGWGAEEDTSSSRRRNALSSEGQLDSSGDKQE 520
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BLAST of mRNA_P-lacustris_contig1045.452.1 vs. uniprot
Match: A0A6H5L2A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A2_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 6.770e-59
Identity = 166/384 (43.23%), Postives = 188/384 (48.96%), Query Frame = 0 
Query:   59 KEWKRATEIFDQARYVDRIRPSLQIYGALLGALADGERWGDILIYLDRMVADGVVPDAVATNTAVLAAAELGEGRRALSLLEG-EGMRRR---KPEVVVDAGVSRDAKGGGSDNPLSLNRQXXXXXXXXXXE-------VLRSGDDENV---------RCDVAGGQ---GEDAGAVALPEWRTCATVRETREQTEEEAGGVGVGGVAVGHGCSSGVGAAVRGSTRTMRDSGSVDGFAGGWETVTPGLLKSVLRALDETGEDAAVLEAVKRGREKRVLLTPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLWSGDSWSDRNGWGGQEEKSS 419
            KEWKRATEIFD+ARYV RIRPSLQIYGALLGALA+GERW D+L+Y+DRMVADGV  DA ATNTAVLAAAELG+GRRALSLLEG EG ++R   + E+V DAG     +GGGSDN L  +            E       VL  G+ E           R   A G+   GE++   A    R C      R+    E   V                 +  G+ RT  DS SVD   GGWE VTPGLL SVLRALDE  ED+AVLEAVKRGREK VLL PSI                                                                               AGLWSGDSW D  GWG +E+KSS
Sbjct:  549 KEWKRATEIFDEARYVHRIRPSLQIYGALLGALAEGERWADVLVYMDRMVADGVARDAAATNTAVLAAAELGDGRRALSLLEGGEGSQQRGGRQREMVRDAGGE---EGGGSDNRLLWDGLQRRRRPAAVDEGDGGRGVVLGQGELEGETEALLGRRQRAATAAGEKRHGEESEVRARTRIRPCPEAARERQGVLGEQNCVDE--------------ESEDGTRRTGGDSDSVDDGVGGWEGVTPGLLISVLRALDEQDEDSAVLEAVKRGREKGVLLNPSIYRCALKACGNLGDYDQANDILVRMAEESLTPDIVHWNHALRASAACARWQETRLRLKEMETSGSTPDEFSYSMALKACSAGLWSGDSWCDSRGWGAEEDKSS 915
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1045.452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ90_ECTSI7.280e-6144.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2A2_9PHAE6.770e-5943.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 353..385
e-value: 0.0017
score: 16.4
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 321..358
e-value: 0.0014
score: 18.7
coord: 1..56
e-value: 2.6E-6
score: 27.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 44..79
score: 8.407
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 80..114
score: 8.155
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 115..151
score: 5.163
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 9.12
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 349..383
score: 9.142
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 314..348
score: 7.837
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 54..155
e-value: 3.1E-15
score: 58.0
coord: 1..53
e-value: 4.1E-12
score: 47.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 275..438
e-value: 2.6E-19
score: 71.7
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 5..138
coord: 285..394
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 6.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1045contigP-lacustris_contig1045:68430..72224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1045.452.1mRNA_P-lacustris_contig1045.452.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1045 67131..73720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1045.452.1 ID=prot_P-lacustris_contig1045.452.1|Name=mRNA_P-lacustris_contig1045.452.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=450bp
MRDLGIKPDAQTFNIAVAACARSGERLAAETLVANMRRARVTPDEFTYAS
LVAACGRAKEWKRATEIFDQARYVDRIRPSLQIYGALLGALADGERWGDI
LIYLDRMVADGVVPDAVATNTAVLAAAELGEGRRALSLLEGEGMRRRKPE
VVVDAGVSRDAKGGGSDNPLSLNRQQQRRRRRQRREVLRSGDDENVRCDV
AGGQGEDAGAVALPEWRTCATVRETREQTEEEAGGVGVGGVAVGHGCSSG
VGAAVRGSTRTMRDSGSVDGFAGGWETVTPGLLKSVLRALDETGEDAAVL
EAVKRGREKRVLLTPSIYRCALKAAGNLGDYKQANHLLARMAEEHLTPDI
VHWNHALRALAAGGRWEEARLRLHEMEISDSSPDEFSYSMALKACSAGLW
SGDSWSDRNGWGGQEEKSSSSGAQQRDTSREKQEQPRALPPAEGKTLSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf