prot_P-lacustris_contig1028.330.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1028.330.1
Unique Nameprot_P-lacustris_contig1028.330.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length248
Homology
BLAST of mRNA_P-lacustris_contig1028.330.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 6.140e-30
Identity = 89/181 (49.17%), Postives = 105/181 (58.01%), Query Frame = 0
Query:    6 PWHG--VRRSPRRPSSLASLPAALCLSSLSLSAASSPRTAVPPAKALPARRVVGCQHPGCSTAARYGPIDAPRIACQAHKRAGQYTTNRHGVMFKATRDGDAFRTPVVVAAGSPPS-SGTTGTMAASDQSRPPSKSGSSNSSFSPRSMAAAKSFARAQTLKRVNRPGLSGEDEVRSPPWQD 183
            P HG  V+++     S AS P    +  LS S +SS  T+VPPAK LP    V CQH GCS  ARYGP+D+P   CQ HKR GQ+TTNRHG +F+ATR+G+AFR      A SPP  S   G +AASDQSR PS   S   S S        S  R Q LKR NRPGLSG +   S   +D
Sbjct:   99 PTHGAVVKQALSVLKSSASHPGRAGMPVLSASPSSSAHTSVPPAKELPIP--VRCQHRGCSNLARYGPLDSPPCTCQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATAKSPPPCSINKGNLAASDQSRLPSTGSSGAPSSSSHPKPGKTSGTRGQVLKRANRPGLSGGNNRESQSSRD 277          
BLAST of mRNA_P-lacustris_contig1028.330.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 5.270e-26
Identity = 75/142 (52.82%), Postives = 86/142 (60.56%), Query Frame = 0
Query:   32 LSLSAASSPRTAVPPAKALPARRVVGCQHPGCSTAARYGPIDAPRIACQAHKRAGQYTTNRHGVMFKATRDGDAFRTPVVVAAGSPPS-SGTTGTMAASDQSRPPSKSGSSNSSFSPRSMAAAKSFARAQTLKRVNRPGLSG 172
            LS S +S   TAVPPAK  P    + CQH GCS  ARYGP+D+P  ACQ HKR GQ+TTNRHG +F+ATR+G+AFR        SPP  S   G + ASDQSR PS   S  SS S        S  R Q LKR NR G+SG
Sbjct:  137 LSTSPSSPAHTAVPPAKEPPIP--MHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATVKSPPPCSINKGDLVASDQSRLPSTGSSGASSSSSHPKPEETSGTRGQVLKRANRQGISG 276          
BLAST of mRNA_P-lacustris_contig1028.330.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 9.870e-21
Identity = 73/156 (46.79%), Postives = 86/156 (55.13%), Query Frame = 0
Query:   35 SAASSPRTAVPPAKALPARRVVGCQHPGCSTAARYGPIDAPRIACQAHKRAGQYTTNRHGVMFKATRDGDAFRTPVVVAA-------GSPPSSGTTGTMAASDQSRPPSKSGSSNSSFSPRSMAAAKSFARAQTLKRVNRPGLSGE--DEVRSPPW 181
            S+ S P T+    K L A     C++PGC  +A+YG  DAP   CQAHKRAGQYTTNRHG +  ATRDGDAFRTP V           SP SS   GT AAS Q R  S  GS+ SS        AK  +    LKR +RPG S    +E R+P +
Sbjct:   38 SSMSPPPTSTSSPKTLQAPTAPRCEYPGCPKSAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVPAVTVPPSPASSEIAGTEAASAQPRRRST-GSTGSSVPSHRKPKAKLSSSVHALKRKSRPGTSSSRHEESRAPQY 192          
BLAST of mRNA_P-lacustris_contig1028.330.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.850e-20
Identity = 74/157 (47.13%), Postives = 83/157 (52.87%), Query Frame = 0
Query:   35 SAASSPRTAVPPAKALPARRVVGCQHPGCSTAARYGPIDAPRIACQAHKRAGQYTTNRHGVMFKATRDGDAFRTPVVVAA-------GSPPSSGTTGTMAASDQSRPPSKSGSSNSSFSPRSMAAAKSFARAQTLKRVNRPGLSGEDEVRSPPWQDR 184
            S+ S P T+    K L A +   C++PGC   A+YG  DAP   CQAHKRAGQYTTNRHG +  ATRDGDAFRTP V           SP SS   G  AAS Q R  S  GSS S         AK  +   TLKR NRP  S      SP  Q+R
Sbjct:   38 SSLSPPPTSTSSPKTLLAPKAPRCEYPGCPKYAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVLAVTVPPSPASSEIAGMEAASAQPRRRST-GSSGSLVPSHRKPKAKLSSSVHTLKRKNRPEPSSSGHEESPALQNR 193          
BLAST of mRNA_P-lacustris_contig1028.330.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 2.200e-20
Identity = 68/144 (47.22%), Postives = 79/144 (54.86%), Query Frame = 0
Query:   48 KALPARRVVGCQHPGCSTAARYGPIDAPRIACQAHKRAGQYTTNRHGVMFKATRDGDAFRTPVVVAA-------GSPPSSGTTGTMAASDQSRPPSKSGSSNSSFSPRSMAAAKSFARAQTLKRVNRPGLSGEDEVRSPPWQDR 184
            K LP  +   C++PGC  +A+YG  +AP   CQAHKRAGQYTTNRHG +  ATRDGDAFRTP V           SP SS   GT AAS + R  S  GSS SS            +   TLKR NRPG S      SP  ++R
Sbjct:  105 KTLPVPKAPRCEYPGCPKSAKYGLREAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVPAVTVPPSPASSEIAGTEAASARPRRRST-GSSGSSVPSHRKPKENLSSSVHTLKRKNRPGTSSSRHEESPAPKNR 247          
BLAST of mRNA_P-lacustris_contig1028.330.1 vs. uniprot
Match: D7G0U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U7_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.740e-15
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0
Query:   58 CQHPGCSTAARYGPIDAPRIACQAHKRAGQYTTNRHGVMFKATRDGDAFRTPVVVAAGSPP 118
            CQH GCS  ARYGP+D+P  ACQ HKR GQ+TT+RHG +F+ATR+G+AFR        SPP
Sbjct:    3 CQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPP 63          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1028.330.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5LLY6_9PHAE6.140e-3049.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L360_9PHAE5.270e-2652.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYF0_9PHAE9.870e-2146.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGW8_ECTSI1.850e-2047.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLI4_9PHAE2.200e-2047.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0U7_ECTSI1.740e-1560.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..247
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..37
score: 0.484

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1028contigP-lacustris_contig1028:21143..24395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1028.330.1mRNA_P-lacustris_contig1028.330.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1028 18694..28211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1028.330.1 ID=prot_P-lacustris_contig1028.330.1|Name=mRNA_P-lacustris_contig1028.330.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=248bp
MVTACPWHGVRRSPRRPSSLASLPAALCLSSLSLSAASSPRTAVPPAKAL
PARRVVGCQHPGCSTAARYGPIDAPRIACQAHKRAGQYTTNRHGVMFKAT
RDGDAFRTPVVVAAGSPPSSGTTGTMAASDQSRPPSKSGSSNSSFSPRSM
AAAKSFARAQTLKRVNRPGLSGEDEVRSPPWQDRPASSQDVTLDPSMALR
VRRALCTASRTRRVQWCSSSREHRASEKPRMRRALQSLSQGLPHQGQ*
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