prot_P-lacustris_contig1003.137.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1003.137.1
Unique Nameprot_P-lacustris_contig1003.137.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length357
Homology
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BLAST of mRNA_P-lacustris_contig1003.137.1 vs. uniprot
Match: D8LL04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL04_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 1.790e-94
Identity = 198/352 (56.25%), Postives = 216/352 (61.36%), Query Frame = 0 
Query:    3 EGERAAAADRHAKLLRNLASKLSRRNFQETFPFKDVFSAHQGLLRINEKLTQQMLQQDKDIIILRHKLTEGLSQGESSEALRSMQGELQRLQGQVSDKYRSSAESVSEQLRLMKEVQLLQDQLKRSNERLGKVQVEHGLSTSRCTTLEDENALSESALTLLRAETESLRRLLGSREAEAGVMREQARKEREELVSRLLKDKESMLEEMNKMNDENATLRNEKNNFAAKLQQLQQQLQDTSTAAQARRRATSGAMGCDNERSEARTAPAWLSQDQQXXXXXXXXXXXXXXXXXXXXXXXTYFGSFGESG--RKQSGSISAGLPSRCFQAIEAHSSGINDVVFEKGGVLLATAG 352
            +G+  AA  RH  LLR+LASKL+RRN +E+ PFKDVF AHQGLL INEKLTQQMLQQDKDIIILRHKLTEGLSQGESSEALR MQ ELQRLQ QVSDKYRSSAES SEQLRLMKE QLLQDQLK SNER                                                                          MLEEMNKMN+EN+TLR +K + AAKLQQ ++ +QDT+TAAQARRRATSG MG DNER EA TAPAWLSQ+QQ                           S   SG  +K +G  S GLPSRCFQAIEAHSSG+N VVFEKGGVLLATAG
Sbjct:    7 KGDSTAADSRHKGLLRSLASKLARRNLEESVPFKDVFLAHQGLLHINEKLTQQMLQQDKDIIILRHKLTEGLSQGESSEALRRMQDELQRLQVQVSDKYRSSAESASEQLRLMKEAQLLQDQLKHSNER--------------------------------------------------------------------------MLEEMNKMNEENSTLRQDKKDLAAKLQQQEKGIQDTTTAAQARRRATSGVMGGDNERPEAGTAPAWLSQEQQVGDDPSQQPQGEGDMPA----------SSWASGLRKKNAGPASTGLPSRCFQAIEAHSSGVNGVVFEKGGVLLATAG 274
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BLAST of mRNA_P-lacustris_contig1003.137.1 vs. uniprot
Match: A0A836CNH8_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH8_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 7.200e-16
Identity = 100/310 (32.26%), Postives = 133/310 (42.90%), Query Frame = 0 
Query:   45 LLRINEKLTQQMLQQDKDIIILRHKLTEGLSQG-ESSEALRSMQGELQRLQGQVSDKYRSSAESVSEQLRLMKEVQLLQDQLKRSNERLGKVQVEHGLSTSRCTTLEDENALSESALTLLRAETESLRRLLGSREAEAGVMREQARKEREELVSRLLKDKESMLEEMNKMNDENATLRNEKNNFAAKLQQLQQQLQDTSTAAQARRRATSGAMGCDNERSEARTAPAWLSQDQQXXXXXXXXXXXXXXXXXXXXXXXTYFGSFGESGRKQSGSIS-AGLPSRCFQAIEAHSSGINDVVFEKGGVLLATAG 352
            L R N  L Q  +  D+++IILRHK++EGL  G + SEA+R+MQGEL RL  QVSDKYR  AE VSEQLRL+  VQ L+  L++S   L ++QVEHG + +R      E                                   +  E E L+SR+L+DK+             ATLR  +                    A A RR T  A+G     ++ R                                          SG    GS+S A +PSRC   + AH+SGINDVVF + G L+A+ G
Sbjct:    2 LRRENADLRQHSIAADRELIILRHKVSEGLGGGGQDSEAMRAMQGELSRLHEQVSDKYRGQAEYVSEQLRLVMRVQELEAALRQSASALERLQVEHGETMARGA----EAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATRASTAESESLLSRVLEDKQXXXXXXXXXXXXLATLRESR--------------------AAALRRHTDPALGAIAAAADGRRGSG--------------------------------------SGSSARGSVSGATVPSRCRHRLPAHASGINDVVFSESGALIASGG 249
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BLAST of mRNA_P-lacustris_contig1003.137.1 vs. uniprot
Match: A0A6H5L485_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L485_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.190e-8
Identity = 34/47 (72.34%), Postives = 42/47 (89.36%), Query Frame = 0 
Query:  206 MLEEMNKMNDENATLRNEKNNFAAKLQQLQQQLQDTSTAAQARRRAT 252
            MLEEMNKMN+EN+TLR +K + AAKLQQ ++ +QDT+TAAQARRRAT
Sbjct:    1 MLEEMNKMNEENSTLRQDKKDLAAKLQQQEKGVQDTTTAAQARRRAT 47
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1003.137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LL04_ECTSI1.790e-9456.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CNH8_9STRA7.200e-1632.26WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6H5L485_9PHAE1.190e-872.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..138
NoneNo IPR availableCOILSCoilCoilcoord: 196..251
NoneNo IPR availablePANTHERPTHR19878AUTOPHAGY PROTEIN 16-LIKEcoord: 12..356
NoneNo IPR availablePANTHERPTHR19878:SF8AUTOPHAGY-RELATED 16, ISOFORM Fcoord: 12..356
IPR013923Autophagy-related protein 16PFAMPF08614ATG16coord: 21..211
e-value: 7.9E-11
score: 42.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1003contigP-lacustris_contig1003:8546..16093 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1003.137.1mRNA_P-lacustris_contig1003.137.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1003 8437..22263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1003.137.1 ID=prot_P-lacustris_contig1003.137.1|Name=mRNA_P-lacustris_contig1003.137.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=357bp
MSEGERAAAADRHAKLLRNLASKLSRRNFQETFPFKDVFSAHQGLLRINE
KLTQQMLQQDKDIIILRHKLTEGLSQGESSEALRSMQGELQRLQGQVSDK
YRSSAESVSEQLRLMKEVQLLQDQLKRSNERLGKVQVEHGLSTSRCTTLE
DENALSESALTLLRAETESLRRLLGSREAEAGVMREQARKEREELVSRLL
KDKESMLEEMNKMNDENATLRNEKNNFAAKLQQLQQQLQDTSTAAQARRR
ATSGAMGCDNERSEARTAPAWLSQDQQHNHQHDKLKQPQGEGKGESTSTS
TYFGSFGESGRKQSGSISAGLPSRCFQAIEAHSSGINDVVFEKGGVLLAT
AGTTRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013923Autophagy-rel_prot_16