prot_P-lacustris_contig100.99.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig100.99.1
Unique Nameprot_P-lacustris_contig100.99.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length224
Homology
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BLAST of mRNA_P-lacustris_contig100.99.1 vs. uniprot
Match: D7FVI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI0_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 8.410e-59
Identity = 121/219 (55.25%), Postives = 141/219 (64.38%), Query Frame = 0 
Query:    6 ETLASLSLLDRTSCGRDSGVLASGADFSRNAKMGAGGTSFATSDANNLPA-ATSSRAGGTPGSDDDLTDTDEGVMARLAEFTEMTRRTAVHNEELCRELADEKRRVAHTTRKLEQSQITCNELRESLALAQDTVMKLRDHEIAWAESTASEMSLKAEMCALKDEYGSVSGEVSVLRKRCEMLQRENAELVERFAKIAEEKRQVESRARRLLSRDRYRGY 223
            E L + S +   S GRD     +GADF RNA +G G T+  T    ++PA AT+SRA G   SDDDLTDTDEGVMARLAEF EM RRTA HNE                                        V+KLR+HE+AWAESTASEMSL++EMCALKDEY  VSG+ S LRKRC++L+RENAELVERFA +AEEKRQ+ES+ARRLL  DRYRGY
Sbjct:   81 EALTNKSEIMGASYGRDGTTPENGADFRRNASLGTGKTACPTPSTKSVPAPATASRAAGAATSDDDLTDTDEGVMARLAEFIEMARRTAAHNE----------------------------------------VVKLREHEMAWAESTASEMSLRSEMCALKDEYAGVSGDASALRKRCDVLERENAELVERFATMAEEKRQMESKARRLLRSDRYRGY 259
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig100.99.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVI0_ECTSI8.410e-5955.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 176..210
NoneNo IPR availableCOILSCoilCoilcoord: 96..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig100contigP-lacustris_contig100:30939..34213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig100.99.1mRNA_P-lacustris_contig100.99.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig100 30050..34983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig100.99.1 ID=prot_P-lacustris_contig100.99.1|Name=mRNA_P-lacustris_contig100.99.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=224bp
MLHGGETLASLSLLDRTSCGRDSGVLASGADFSRNAKMGAGGTSFATSDA
NNLPAATSSRAGGTPGSDDDLTDTDEGVMARLAEFTEMTRRTAVHNEELC
RELADEKRRVAHTTRKLEQSQITCNELRESLALAQDTVMKLRDHEIAWAE
STASEMSLKAEMCALKDEYGSVSGEVSVLRKRCEMLQRENAELVERFAKI
AEEKRQVESRARRLLSRDRYRGY*
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