mRNA_P-lacustris_contig999.16267.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig999.16267.1 vs. uniprot
Match: D8LMG4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG4_ECTSI) HSP 1 Score: 212 bits (540), Expect = 2.460e-68 Identity = 106/142 (74.65%), Postives = 121/142 (85.21%), Query Frame = 1
Query: 1 RNDEEDDIVTFIGSPRLAYNAESKSNGRGLYVNTNLAIQSEWRNAQDADAASELQRQVSPVTIVFDLPDGSQADQEFQLGQTVEVLKSFIESEFGIPMSSQELYLGSVLMMDPMSLLDYPEIDGTGDVLIVVEGEMNEETKK 426
+ DEEDD+V F+GSPR NAE KS+G+GLY++TNL S R QD A + QRQV+ VT+VFDLPDGSQADQEFQLGQTVEVLKSF+ESEFGIPMS QELYLGSVLMMDPM+LLDYPE+DG G+VLIVVEGEMNE+TKK
Sbjct: 18 KTDEEDDVVAFVGSPRFTRNAEMKSSGQGLYLDTNLVRGSVSREVQDVHADNGFQRQVAVVTVVFDLPDGSQADQEFQLGQTVEVLKSFVESEFGIPMSCQELYLGSVLMMDPMTLLDYPEVDGAGNVLIVVEGEMNEDTKK 159
BLAST of mRNA_P-lacustris_contig999.16267.1 vs. uniprot
Match: A0A6V1REP9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1REP9_HETAK) HSP 1 Score: 109 bits (273), Expect = 3.090e-27 Identity = 54/87 (62.07%), Postives = 67/87 (77.01%), Query Frame = 1
Query: 166 RQVSPVTIVFDLPDGSQADQEFQLGQTVEVLKSFIESEFGIPMSSQELYLGSVLMMDPMSLLDYPEIDGTGDVLIVVEGEMNEETKK 426
RQ + VT+VF+LPDGS AD+EF LGQTVE LKS++E EF IPM QEL L ++MDPMSLLDY EI+ +V I V+GE+ EE+KK
Sbjct: 123 RQQTTVTVVFELPDGSTADKEFMLGQTVEFLKSYVEGEFDIPMGQQELLLNGKVLMDPMSLLDYSEINPNEEVFISVQGELGEESKK 209
BLAST of mRNA_P-lacustris_contig999.16267.1 vs. uniprot
Match: A0A7S2RY85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY85_9STRA) HSP 1 Score: 103 bits (258), Expect = 7.880e-26 Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 85 GLYVNTNLAIQSEWR-NAQDADAASELQRQVSPVTIVFDLPDGSQADQEFQLGQTVEVLKSFIESEFGIPMSSQELYLGSVL--MMDPMSLLDYPEIDGTGDVLIVVEGEMNEETKK 426
GL ++ +LA S+ Q+ D LQR PV +VFDLPDGSQ + +FQ+GQT+EVLKSF+ SE GIPM Q+L+L + +MDP++LLDY +ID +VL+ VEG M+ KK
Sbjct: 21 GLGLDLSLASASKGSPRLQEEDLV--LQRATEPVIVVFDLPDGSQVEHKFQMGQTIEVLKSFVASECGIPMGGQDLFLEGLQQPLMDPLTLLDYSQIDPASEVLVRVEGTMHMSAKK 135
BLAST of mRNA_P-lacustris_contig999.16267.1 vs. uniprot
Match: F0YBA1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBA1_AURAN) HSP 1 Score: 103 bits (256), Expect = 3.050e-25 Identity = 62/141 (43.97%), Postives = 87/141 (61.70%), Query Frame = 1
Query: 13 EDDIVTFIGSPRLAYNAESKS--NGRGLYVNTNLAIQSEWRNAQDADAASELQRQV-SPVTIVFDLPDGSQADQEFQLGQTVEVLKSFIESEFGIPMSSQELYLGSVLMMDPMSLLDYPEIDGTGDVLIVVEGEMNEETKK 426
+DD VT +GS L AE K+ RGL ++ A+ RN + ++R + + V +VF+LPDGS+ ++ F++G TVEVLKSF+E EF IPM Q LYL LM+DP+SL DYP ID D + V GE+ E+ +K
Sbjct: 22 DDDYVTAVGSA-LPSAAEPKAALGLRGLDIS---AVVKSERNPRPCAEHERVERALDAQVLVVFELPDGSEGEKHFKMGHTVEVLKSFVEEEFEIPMGVQSLYLDETLMLDPLSLSDYPAIDPARDCFVRVGGEIPEQAQK 158
BLAST of mRNA_P-lacustris_contig999.16267.1 vs. uniprot
Match: A0A8J2SIH4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIH4_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.720e-24 Identity = 55/142 (38.73%), Postives = 84/142 (59.15%), Query Frame = 1
Query: 1 RNDEEDDIVTFIGSPRLAYNAESKSNGRGLYVNTNLAIQSEWRNAQDADAASELQRQVSPVTIVFDLPDGSQADQEFQLGQTVEVLKSFIESEFGIPMSSQELYLGSVLMMDPMSLLDYPEIDGTGDVLIVVEGEMNEETKK 426
R D DD++ I ++ AE K G+ + ++ RNA++ + ++R +PV +VF+LPDGS+ ++ F+LGQTVEVLK+F+E EF I MS+ LYLG M DP SL D+P + ++ V GE+ E +K
Sbjct: 7 RVDSRDDLLATISPKLISPGAEPKPRSIGIDM---ASLAKSERNAENTEEDDIIKRLDAPVLVVFELPDGSEGEKTFKLGQTVEVLKAFVEDEFEIDMSASRLYLGDEEMPDPFSLSDFPSVSPRKACVVRVAGEVPERAQK 145
BLAST of mRNA_P-lacustris_contig999.16267.1 vs. uniprot
Match: A0A7S2HLV2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLV2_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.520e-23 Identity = 60/139 (43.17%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 1 RNDEEDDIVTFIGSPRLAYNAESKSNGRGLYVNTNLAIQSEWRNAQDADAASELQ---RQVSPVTIVFDLPDGSQADQEFQLGQTVEVLKSFIESEFGIPMSSQELYL--GSVLMMDPMSLLDYPEIDGTGDVLIVVEG 402
++ ++DD+ I K N R + + +L Q++ N Q +D E Q R + TI+F+LPDGS EFQ+GQTV+VLKS+I SE GIPM+ Q LYL + +++DPM+LLDYPEID ++LI VEG
Sbjct: 24 KDGDDDDMAFAIIPDATPEGLPRKVNPRLIGLGLDLT-QAKQPNDQGSDQTREAQIERRNNTVATILFELPDGSMVQNEFQMGQTVQVLKSYIASEVGIPMAQQSLYLETSTDMLLDPMTLLDYPEIDPMDEILIRVEG 161
BLAST of mRNA_P-lacustris_contig999.16267.1 vs. uniprot
Match: A0A7S2D6F3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6F3_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 4.600e-23 Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 1
Query: 175 SPVTIVFDLPDGSQADQEFQLGQTVEVLKSFIESEFGIPMSSQELYL----GSVLMMDPMSLLDYPEIDGTGDVLIVVEGEM 408
+PV +VFDLPDGS + EF +GQ+VEVLKS+I SE GI M Q+L+L GSVL+MDPMSL DYP+I + +I VEGEM
Sbjct: 31 TPVLVVFDLPDGSSVESEFAIGQSVEVLKSYIASECGIQMGDQQLFLEAADGSVLLMDPMSLSDYPQISAGSENIIRVEGEM 112
BLAST of mRNA_P-lacustris_contig999.16267.1 vs. uniprot
Match: A0A482RPU6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPU6_9ARCH) HSP 1 Score: 88.2 bits (217), Expect = 1.470e-19 Identity = 51/126 (40.48%), Postives = 75/126 (59.52%), Query Frame = 1
Query: 1 RNDEEDDIVTFIGSPRLAYNAESKSNGRGLYVNTNLAIQSEWRNAQDADAASELQRQVSPVTIVFDLPDGSQADQEFQLGQTVEVLKSFIESEFGIPMSSQELYLGSV--LMMDPMSLLDYPEIDG 372
+NDE + I G + + RG+ +N LA +++ R E + +VFDLPDGSQ + F+LGQ+VEVLKSF+ESE+GIPM++Q ++L S M++P+SLLDY E+ G
Sbjct: 23 KNDELNVIAVCGGHDDITQPQVTSPLLRGMSLNLTLAAEAKARLNDPVAVQEEF------INVVFDLPDGSQGEGNFKLGQSVEVLKSFVESEYGIPMATQRMFLNSSEKQMLNPLSLLDYAEVKG 142
BLAST of mRNA_P-lacustris_contig999.16267.1 vs. uniprot
Match: A0A485K463_9STRA (Aste57867_941 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K463_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.990e-17 Identity = 41/95 (43.16%), Postives = 66/95 (69.47%), Query Frame = 1
Query: 127 RNAQDADAASELQR----QVSPVTIVFDLPDGSQADQEFQLGQTVEVLKSFIESEFGIPMSSQELYLGSVLMMDPMSLLDYPEIDGTGDVLIVVE 399
++ ++ D S+++ Q ++I F+LPD S+A Q+F+ GQTV VLKS++ +EF +PM+S +L LG V+++DP SL DYPE++ V IVV+
Sbjct: 8 QSVKEVDCESKVEEARRLQEEEISITFELPDESEAQQQFKKGQTVAVLKSYLSTEFDLPMTSIKLMLGDVVLVDPYSLTDYPEMERFDAVRIVVK 102
BLAST of mRNA_P-lacustris_contig999.16267.1 vs. uniprot
Match: A0A024TXM3_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXM3_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.260e-13 Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 145 DAASELQRQVSPVTIVFDLPDGSQADQEFQLGQTVEVLKSFIESEFGIPMSSQELYLGSVLMMDPMSLLDYPEIDGTGDVLIVV 396
D A LQ + + I F+LPD S+A Q+F+ GQTV VLKSF+E+EF + M S L V+++DP SL DYP+ + + +VV
Sbjct: 20 DDARRLQEE--DIEITFELPDQSEARQKFKKGQTVMVLKSFLETEFDLHMPSIRLVHNDVVLLDPYSLTDYPDFEHNDEARVVV 101 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig999.16267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig999.16267.1 >prot_P-lacustris_contig999.16267.1 ID=prot_P-lacustris_contig999.16267.1|Name=mRNA_P-lacustris_contig999.16267.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=143bp RNDEEDDIVTFIGSPRLAYNAESKSNGRGLYVNTNLAIQSEWRNAQDADAback to top mRNA from alignment at P-lacustris_contig999:63008..64251+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig999.16267.1 ID=mRNA_P-lacustris_contig999.16267.1|Name=mRNA_P-lacustris_contig999.16267.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=1244bp|location=Sequence derived from alignment at P-lacustris_contig999:63008..64251+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig999:63008..64251+ >mRNA_P-lacustris_contig999.16267.1 ID=mRNA_P-lacustris_contig999.16267.1|Name=mRNA_P-lacustris_contig999.16267.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=858bp|location=Sequence derived from alignment at P-lacustris_contig999:63008..64251+ (Pleurocladia lacustris SAG_25_93)back to top |