mRNA_P-lacustris_contig996.16254.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig996.16254.1 vs. uniprot
Match: D7G0U0_ECTSI (Beta-hydroxylase, aspartyl/asparaginyl family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0U0_ECTSI) HSP 1 Score: 285 bits (728), Expect = 1.770e-88 Identity = 195/258 (75.58%), Postives = 213/258 (82.56%), Query Frame = 3
Query: 549 RNYRGGSGAMSTVYDATRGWGTMRIRYMGRFQQPGINYALLPRTLSALRRLPLAPETAAFQRQLPGTGLPLHVDPSNFVLGCHVGVVIPPPICLGATKDSENGAAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGEVERGGR-GERAWIEVAGEKRYWQTGQAFVFDPSFLHRTHNPTRGERVILNVDIWHPGLKEIEKTAIRLVCDLVEQWNTRSGLFKD 1319
R+Y+GG+G MSTVYDATRGWGTMRIRYMGRF QPG+NY+LLPRTL+ALRRLPLAPETAAFQRQL GTGLPLHVDPSNFVLGCHVGVV+P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX R G ER R GERAWIEV+GEKR+W+ G+AFVFDPSFLHRT+NPT GERVILN+D+WHPGLKE+EKTAIR VC+LVEQWN+RSGLF+D
Sbjct: 173 RSYKGGTGEMSTVYDATRGWGTMRIRYMGRFGQPGVNYSLLPRTLAALRRLPLAPETAAFQRQLAGTGLPLHVDPSNFVLGCHVGVVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSTAEXXXAERRSGTGRDGGTERRERSGERAWIEVSGEKRHWEPGRAFVFDPSFLHRTYNPTDGERVILNIDVWHPGLKEVEKTAIRRVCELVEQWNSRSGLFED 430
BLAST of mRNA_P-lacustris_contig996.16254.1 vs. uniprot
Match: A0A7S3AKA7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AKA7_9EUKA) HSP 1 Score: 102 bits (253), Expect = 4.420e-22 Identity = 74/226 (32.74%), Postives = 90/226 (39.82%), Query Frame = 3
Query: 612 TMRIRYMGRFQQPGINYALLPRTLSALRRLPLAPETAAFQRQLPGTGLPLHVDPSNFVLGCHVGVVIPPPICLGATKDSENGAAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGEVERGGRGERAWIEVAGEKRYWQTGQAFVFDPSFLHRTHNPTRGERVILNVDIWHPGLKEIEKTAIRLVCDLVEQ 1289
TM I Y G P P T++AL L LA ET AFQRQ PGTGLP HVDP ++VLGCH+GV P GGEV +I VAG K +W G +FDPS+ H T NPT +RVILN+D++HP L +E AI+L DL +Q
Sbjct: 2 TMPIYYKGVLH-PEFPADECPATMAALSTLRLAGETVAFQRQSPGTGLPRHVDPCSWVLGCHLGVTCP-------------------------------------------------------------------------------NEGGEVGS------PYISVAGTKYHWDDGSVMLFDPSYRHETFNPTSQDRVILNIDVFHPELSALECEAIQLTIDLKKQ 141
BLAST of mRNA_P-lacustris_contig996.16254.1 vs. uniprot
Match: A0A7S3WKR7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WKR7_9SPIT) HSP 1 Score: 73.6 bits (179), Expect = 1.110e-11 Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 3
Query: 1086 GERAWIEVAGEKRYWQTGQAFVFDPSFLHRTHNPTRGERVILNVDIWHPGLKEIEKTAIR 1265
GE +I VAG+K +W+ G+ VFDPSF H T NPT +R+ILN+DI+HP L ++E IR
Sbjct: 97 GETPYIWVAGDKYHWRDGEVMVFDPSFKHETFNPTSQDRIILNIDIFHPELTDLECDVIR 156
BLAST of mRNA_P-lacustris_contig996.16254.1 vs. uniprot
Match: R1CWD3_EMIHU (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CWD3_EMIHU) HSP 1 Score: 74.7 bits (182), Expect = 1.580e-11 Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 3
Query: 1086 GERAWIEVAGEKRYWQTGQAFVFDPSFLHRTHNPTRGERVILNVDIWHPGLKEIE-KTAIRLVCDL 1280
GE +I VAGEK +W+ G+ VFDPSF H T NPT +R+ILN+D++HP L ++E + IRL +L
Sbjct: 155 GETPYISVAGEKYHWREGEVMVFDPSFKHETFNPTSQDRIILNIDLFHPELTDLECRETIRLKKEL 220
BLAST of mRNA_P-lacustris_contig996.16254.1 vs. uniprot
Match: A0A7S0JKX7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JKX7_9EUKA) HSP 1 Score: 72.8 bits (177), Expect = 1.500e-10 Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 3
Query: 1071 ERGGRGERAWIEVAGEKRYWQTGQAFVFDPSFLHRTHNPTRGERVILNVDIWHPGLKEIEKTAIRLVCDLVEQ 1289
+ GG +I VAG K +W+ G +FDPSF H T NPT ER+ILN+D++HP L ++E AI+L L ++
Sbjct: 222 DEGGAVGSPYIAVAGSKYHWRDGNVMLFDPSFRHETFNPTSQERIILNIDVFHPELTDLECEAIQLTIALKKE 294
BLAST of mRNA_P-lacustris_contig996.16254.1 vs. uniprot
Match: A0A2V3J2T9_9FLOR (Aspartate beta-hydroxylase domain-containing protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2T9_9FLOR) HSP 1 Score: 70.1 bits (170), Expect = 1.690e-9 Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 3
Query: 1089 ERAWIEVAGEKRYWQTGQAFVFDPSFLHRTHNPTRG-ERVILNVDIWHPGLKEIEKTAIRLVCDLVEQWNTRSGLFK 1316
+ +WIEV GE+RYW+ G+ VF+ SF H+T N + ER +L + WHP L E+E+ A+ + ++E T K
Sbjct: 250 DMSWIEVGGERRYWENGKGLVFNTSFFHQTMNESEDQERHVLLIRFWHPELSEVERKALSFLFTIIENPATHPATLK 326
BLAST of mRNA_P-lacustris_contig996.16254.1 vs. uniprot
Match: R7QQ79_CHOCR (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ79_CHOCR) HSP 1 Score: 68.9 bits (167), Expect = 2.420e-9 Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 3
Query: 1089 ERAWIEVAGEKRYWQTGQAFVFDPSFLHRTHNPTRGE-RVILNVDIWHPGLKEIEKTAIRLVCDLVEQWNTRSGLFK 1316
+++WIEVAGE+RYW+ G+ VF+ SF H+T N + + RV+L + WHP L+ IE+ A+ + ++ + + K
Sbjct: 191 KQSWIEVAGERRYWENGKGLVFNTSFFHQTMNESNEQDRVVLLIRFWHPQLRPIEREALSFLFQAIDNPDGHPSVVK 267
BLAST of mRNA_P-lacustris_contig996.16254.1 vs. uniprot
Match: A0A838L046_9SPHN (Aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=2 Tax=Sphingomonas chungangi TaxID=2683589 RepID=A0A838L046_9SPHN) HSP 1 Score: 67.0 bits (162), Expect = 2.030e-8 Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 3
Query: 1098 WIEVAGEKRYWQTGQAFVFDPSFLHRTHNPTRGERVILNVDIWHPGLKEIEKTAIRLVCD 1277
W V E R W GQAFVFD + H NPT RV+L VD+WHPGL+ E+ A++ V +
Sbjct: 317 WFRVGAETREWHVGQAFVFDDTIEHEACNPTDQLRVVLIVDVWHPGLRSGERHAVQSVME 376
BLAST of mRNA_P-lacustris_contig996.16254.1 vs. uniprot
Match: A0A7S0GHF6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHF6_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.860e-8 Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 3
Query: 1089 ERAWIEVAGEKRYWQTGQAFVFDPSFLHRTHNPTRGERVILNVDIWHPGLKEIEKTAIRLVCDL 1280
E W +VA EK+ W G+ D SF H T NP+ +R +L VD WHP L + E++A+ LV DL
Sbjct: 236 EGCWFDVANEKKTWIEGKLTTVDTSFEHSTGNPSNEDRYVLIVDFWHPELNDAERSALELVYDL 299
BLAST of mRNA_P-lacustris_contig996.16254.1 vs. uniprot
Match: UPI001FE6F42E (aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=1 Tax=Sphingomonas sediminicola TaxID=386874 RepID=UPI001FE6F42E) HSP 1 Score: 64.3 bits (155), Expect = 6.180e-8 Identity = 26/58 (44.83%), Postives = 33/58 (56.90%), Query Frame = 3
Query: 1089 ERAWIEVAGEKRYWQTGQAFVFDPSFLHRTHNPTRGERVILNVDIWHPGLKEIEKTAI 1262
E W V E RYW G+AFVFD + H NP+ RV+ D+WHP L E E+ A+
Sbjct: 190 EGCWFRVGAETRYWNRGEAFVFDDTIEHEALNPSNELRVVFIFDVWHPDLSEAERNAV 247 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig996.16254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig996.16254.1 >prot_P-lacustris_contig996.16254.1 ID=prot_P-lacustris_contig996.16254.1|Name=mRNA_P-lacustris_contig996.16254.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=249bp MSTVYDATRGWGTMRIRYMGRFQQPGINYALLPRTLSALRRLPLAPETAAback to top mRNA from alignment at P-lacustris_contig996:66575..69115- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig996.16254.1 ID=mRNA_P-lacustris_contig996.16254.1|Name=mRNA_P-lacustris_contig996.16254.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2541bp|location=Sequence derived from alignment at P-lacustris_contig996:66575..69115- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig996:66575..69115- >mRNA_P-lacustris_contig996.16254.1 ID=mRNA_P-lacustris_contig996.16254.1|Name=mRNA_P-lacustris_contig996.16254.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1494bp|location=Sequence derived from alignment at P-lacustris_contig996:66575..69115- (Pleurocladia lacustris SAG_25_93)back to top |