mRNA_P-lacustris_contig994.16231.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig994.16231.1 vs. uniprot
Match: D7G0H9_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H9_ECTSI) HSP 1 Score: 328 bits (840), Expect = 1.280e-107 Identity = 202/309 (65.37%), Postives = 219/309 (70.87%), Query Frame = 2
Query: 155 SCLVGAGAHTEVRDRNNDTPLLLAAWLGHAAAIEKLLASGARVDADGIPRSALHCACMQXXXXXXXXXXRGGADETVLDEDGNTPAQVIGTMSESMERAEDVALIHDMLRCAPADRAWRRRGWLVMLRARDCVQTGL-PASSPPPIAVTTRSAARRGAGVSRIDGG-SRPLIGTM-SPRFFEGKGDKAIH-HQRSKSEVAGKRRKGRAPQVAGGSGRGGDRKTSSER-------SSGAKACRECQAGKGKRSRTNKGGRRATRAGTVRVGRGGAESEEVLASRQVLASLVARLISLGEEGAFRCVLSFL 1048
+CLVGAGAHTEVRDRNNDTPLLLAAWLGHA AI KLLASGARVDADGIPRSALHCACMQ RGGADETV DEDGN+PAQVIGTMSES+ERAED+ LI +MLR APADRAWRRRGWLVMLR RDCV GL P++ PPP VTTRSAARRGA V IDGG SR + G SP FFEG+G H + +V GK++ AP V RGG K R SSG+ + C GKG S K R A + + GRGGAESEE LA RQ LASLVARLI LGEEGAFRCVLSFL
Sbjct: 53 ACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVDADGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAEDIVLIREMLRRAPADRAWRRRGWLVMLRNRDCVAAGLLPSARPPPTTVTTRSAARRGARVWAIDGGGSRSIAGAATSPGFFEGQGLTTGHIRNHHQLKVHGKKKSFGAPGVTVAGSRGGGGKAPRSRRSPSAGGSSGSGSF--CPPGKGHVSSNKKRPRGAAKRRVGKRGRGGAESEEELAGRQALASLVARLIGLGEEGAFRCVLSFL 359
BLAST of mRNA_P-lacustris_contig994.16231.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 1.230e-14 Identity = 66/176 (37.50%), Postives = 88/176 (50.00%), Query Frame = 2
Query: 161 LVGAGAHTEVRDRNND--TPLLLAA--WLGHAAAIEKLLASGARVDA----DGIPRSALHCACMQXXXXXXXXXXRGGADETVLDEDGNTPAQVIGTMSES----MERAEDVALIHDMLRCAPADRAWRRRGWLVMLRARDCVQTGLPASSPPPIAVTTRSAARRGAGVSRIDGGS 652
L+GAGA V+ N+ TPL LA W+ I LL GA ++A D P LH AC + R GADE + + DG+TPA V+G + ++ ER D IH ML APADR+WRRRGWLV+ +R C P V + + + +SRI+G S
Sbjct: 303 LLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTP---LHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVL--SRSC-----------PTRVHIANGSSSSSSISRINGNS 462
BLAST of mRNA_P-lacustris_contig994.16231.1 vs. uniprot
Match: D7FY50_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY50_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 8.930e-13 Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 2
Query: 161 LVGAGAHTEVRDRNNDTPLLLAAWLGHAAAIEKLLASGARVD-ADGIPRSALHCACMQXXXXXXXXXXRGGADETVLDEDGNTPAQVIGTMSESMERAEDVA-LIHDMLRCAPADRAWRRRGWLVMLRAR 544
++ A H + D + L +AA GHA A++ L+ +GA VD A+ + LH ACM R ADE +ED P V+G +R E+V I++ML APADR WRRRGWL MLRAR
Sbjct: 223 ILAARPHVDALDDRGVSALGIAARKGHAKALDVLIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEVFRNEDLAFPDDVVGHAVAGDKRDEEVVEWIYEMLARAPADRVWRRRGWLAMLRAR 352
BLAST of mRNA_P-lacustris_contig994.16231.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 2.570e-11 Identity = 55/143 (38.46%), Postives = 73/143 (51.05%), Query Frame = 2
Query: 161 LVGAGAHTEVRDRNNDTPLLLAAWLGHAA-AIEKLLASGARVDADGIPRSALHCACMQXXXXXXXXXX---RGGADETVLDEDGNTPAQVIGTMSESMER-AEDVALIHDMLRCAPADRAWRRRGWLVMLRARDCVQTGLPAS 574
L+ AGA + + TPL +A G + A+ LL G +V + ++ LH ACM R G E LD+ GNTPA ++ S R A +V H +L APADRAWRRR WLVMLRAR + G+ +S
Sbjct: 288 LLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSGP-MDKTMLHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSRKAREVERAHVLLANAPADRAWRRRSWLVMLRARTERERGVNSS 429
BLAST of mRNA_P-lacustris_contig994.16231.1 vs. uniprot
Match: Q8QNP0_ESV1K (EsV-1-21 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP0_ESV1K) HSP 1 Score: 71.2 bits (173), Expect = 6.430e-10 Identity = 51/137 (37.23%), Postives = 67/137 (48.91%), Query Frame = 2
Query: 149 MSSCLVGAGAHTEVRDRNNDTPLLLAAWLGHAAAIEKLLASGARVDADG--IPRSALHCACMQXXXXXXXXXX--RGGADETVLDEDGNTPAQVIGTMSESMERAEDVALIHDMLRCAPADRAWRRRGWLVMLRARD 547
+S+ L+ AGA+ D+ ++ L +W LL GA V+A G SALH A R GADETV+D+ G TP V + + AE + +L APADR WRRRGWLVML R+
Sbjct: 344 VSATLLEAGANASAEDQMGESSLSSDSWSCSVDMALLLLRYGADVNASGGLFGSSALHNAIKNRDNTEAMVDLLLRWGADETVVDDRGRTPLDVFTSGTRFQRTAETKERVRKLLVNAPADRTWRRRGWLVMLWERE 480
BLAST of mRNA_P-lacustris_contig994.16231.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 69.7 bits (169), Expect = 1.780e-9 Identity = 53/135 (39.26%), Postives = 66/135 (48.89%), Query Frame = 2
Query: 161 LVGAGAHTEVRDRNNDTPLLLAAWLGHAAAIEKLLASGARVDADGIPRS-----ALHCACMQXXXXXXXXXXRGGADETVLDEDGNTPAQVIGTMSESME---RAEDVALIHDMLRCAPADRAWRRRGWLVMLRA 541
LV AGAH EV D ++ TP L A A L G+ ++A I A A Q R GADET L+ DG T A+V+G E +DV + D+L AP DRAWRRRG+LV+ RA
Sbjct: 158 LVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292
BLAST of mRNA_P-lacustris_contig994.16231.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 2.540e-9 Identity = 53/135 (39.26%), Postives = 66/135 (48.89%), Query Frame = 2
Query: 161 LVGAGAHTEVRDRNNDTPLLLAAWLGHAAAIEKLLASGARVDADGIPRS-----ALHCACMQXXXXXXXXXXRGGADETVLDEDGNTPAQVIGTMSESME---RAEDVALIHDMLRCAPADRAWRRRGWLVMLRA 541
LV AGAH EV D ++ TP L A A L GA ++A + A A Q R GADET L+ DG T A+V+G E +D+ + D+L APADRAWRRRG LV+ RA
Sbjct: 207 LVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341
BLAST of mRNA_P-lacustris_contig994.16231.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 68.2 bits (165), Expect = 6.350e-9 Identity = 54/135 (40.00%), Postives = 65/135 (48.15%), Query Frame = 2
Query: 164 VGAGAHTEV-RDRNNDTPLLLAAWLGHAAAIEKLLA---SGARVDADGIPRSA-LHCACMQXXXXXXXXXXRGGADETVLDEDGNTPAQVIGTMSESMERAEDVALIHD----MLRCAPADRAWRRRGWLVMLRA 541
G G + E RD TPL A A+I+ LA GA +A G LH ACM R GADET +++G+ PA VIG EDV H ML APADR+WRRRGWLV+ R+
Sbjct: 302 AGGGVNAETGRDFLRWTPLHFAVER-RIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRS 435
BLAST of mRNA_P-lacustris_contig994.16231.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 1.120e-8 Identity = 51/139 (36.69%), Postives = 69/139 (49.64%), Query Frame = 2
Query: 161 LVGAGAHTEVRDRNND----TPLLLAAWLGHAA--AIEKLLASGARVDADGI-PRSALHCACMQXXXXXXXXXXRGGADETVLDEDGNTPAQVI-----GTMSESMERAEDVALIHDMLRCAPADRAWRRRGWLVMLRA 541
L+GAGA +V + NN+ TPL +A + + LL G+ + A + ++ LH AC R GADE + + G TPA VI + ER D I ML APADR+WRRRGWLV+ R+
Sbjct: 141 LLGAGA--DVNETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRPRRQNDFDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSRS 277
BLAST of mRNA_P-lacustris_contig994.16231.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 2.550e-8 Identity = 57/158 (36.08%), Postives = 78/158 (49.37%), Query Frame = 2
Query: 161 LVGAGAHTEVRDRNNDTPLLLAAWLGHAAAIEKLLASGARVDA-DGIPRSALHCACMQXXXXXXXXXX----RGGADETVLDEDGNTPAQVIGTMSESMER-AEDVALIHDMLRCAPADRAWRRRGWLVMLRAR---DCVQTGLPASSPPPIAVTTRS 607
L AGA+ E + N TPL +A+ G AA LL GA V + ++ LH + R GADET + E+G+T A ++ +E + AEDV + +L APADRAWRRRG+L++ RA VQ G S P V R+
Sbjct: 576 LTEAGANIEAQ-ANGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRT 732 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig994.16231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig994.16231.1 >prot_P-lacustris_contig994.16231.1 ID=prot_P-lacustris_contig994.16231.1|Name=mRNA_P-lacustris_contig994.16231.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=301bp MSSCLVGAGAHTEVRDRNNDTPLLLAAWLGHAAAIEKLLASGARVDADGIback to top mRNA from alignment at P-lacustris_contig994:35275..36325+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig994.16231.1 ID=mRNA_P-lacustris_contig994.16231.1|Name=mRNA_P-lacustris_contig994.16231.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=1051bp|location=Sequence derived from alignment at P-lacustris_contig994:35275..36325+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig994:35275..36325+ >mRNA_P-lacustris_contig994.16231.1 ID=mRNA_P-lacustris_contig994.16231.1|Name=mRNA_P-lacustris_contig994.16231.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1806bp|location=Sequence derived from alignment at P-lacustris_contig994:35275..36325+ (Pleurocladia lacustris SAG_25_93)back to top |