mRNA_P-lacustris_contig990.16203.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig990.16203.1
Unique NamemRNA_P-lacustris_contig990.16203.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig990.16203.1 vs. uniprot
Match: D7FHL3_ECTSI (Phosphatidylinositol transfer protein PDR16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL3_ECTSI)

HSP 1 Score: 439 bits (1129), Expect = 6.350e-153
Identity = 210/268 (78.36%), Postives = 234/268 (87.31%), Query Frame = 1
Query:    1 VQPGAITAEEAGLISQLREAHFPRGTESYGMPLDDSVFVRYLRARDGNLDKAAAMLKATLEWRRDFGLPEVLPREMDVIRKENSTGKIYISGFDRVGRPILVMRPRCENTLDHDGNIRHLVYQLERARGILQRLSGGLGKACVIIDYVGFTLRNAPSMKTSMATLNILQNHYPETLGQAYLVTPPVVFKGFWKVIYPFIDKRTKEKFIFVTGSAKSPAAQSLLSINFDMDELEEAIGGKYTTKFDSPVYLAGPMDQDFRASLSGVSSG 804
            + PGAIT EEA LISQ+REAHFP GTESYG+PLDD+V VRYLRAR+G+++KAAAML ATLEWRR+FG PEV  +EMDVIRKENSTGK Y+SGFD  GRPILV+RPRCENT DHDGNI+H+VYQLER R ILQR S GLGKACVIIDYVGFTLRNAP MKTSMATLNILQNHYPETLGQA+ ++PPVVFKGFWKVIYPFIDK TKEKF FV GSA SPAAQ +L+ NFDMD LEE IGGKY TKFDS +YLA P+DQD+R +L   +SG
Sbjct:    1 MSPGAITDEEASLISQVREAHFPSGTESYGLPLDDAVLVRYLRAREGSIEKAAAMLTATLEWRREFGFPEVFSKEMDVIRKENSTGKNYVSGFDSHGRPILVLRPRCENTTDHDGNIKHIVYQLERTRAILQRTSDGLGKACVIIDYVGFTLRNAPKMKTSMATLNILQNHYPETLGQAFFISPPVVFKGFWKVIYPFIDKDTKEKFTFVPGSATSPAAQEVLAKNFDMDVLEEGIGGKYATKFDSSIYLAAPLDQDYREALLLTNSG 268          
BLAST of mRNA_P-lacustris_contig990.16203.1 vs. uniprot
Match: A0A835Z4E3_9STRA (Phosphatidylinositol transfer protein PDR16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4E3_9STRA)

HSP 1 Score: 283 bits (723), Expect = 3.570e-91
Identity = 135/259 (52.12%), Postives = 185/259 (71.43%), Query Frame = 1
Query:   13 AITAEEAGLISQLREAHFPRGTESYGMPLDDSVFVRYLRARDGNLDKAAAMLKATLEWRRDFGLPEVLPRE-MDVIRKENSTGKIYISGFDRVGRPILVMRPRCENTLDHDGNIRHLVYQLERARGILQRLSGGLGKACVIIDYVGFTLRNAPSMKTSMATLNILQNHYPETLGQAYLVTPPVVFKGFWKVIYPFIDKRTKEKFIFVTGSAKSPAAQSLLSINFDMDELEEAIGGKYTTKFDSPVYLAGPMDQDFRASL 786
            A+   +   ++++R     +  +  GM LDD   +RYLRAR  +L KA+AML+ TL+WRRDFG+ ++L  + M+ IR+EN+TGKIY+ G D  GR  L+MRP  ENT  HD  ++HLVYQ+ERAR  LQR + G+GK C++IDY G++LRNAP M+TS +TLNI+Q+HYPE LG +Y++ PP +F GFWK+IYPFID  T++KF+FV  S   PAAQ+ L+ NF+MD LEE +GG+    FDS VYL+G +D  F  SL
Sbjct:    6 ALDPRQEAALAEMRSQFAEQ--DGQGMDLDDQCLLRYLRARQYDLPKASAMLQHTLDWRRDFGVQKILSGDIMETIRRENATGKIYVRGEDTQGRVCLIMRPSQENTHMHDDQMKHLVYQMERARLTLQRKTSGMGKLCMVIDYAGYSLRNAPPMRTSRSTLNIVQDHYPELLGVSYMMNPPYIFTGFWKIIYPFIDHVTRQKFVFVNSSPHKPAAQANLAANFNMDALEEQLGGRNAVPFDSAVYLSGAIDTCFEESL 262          
BLAST of mRNA_P-lacustris_contig990.16203.1 vs. uniprot
Match: A0A7S1TTS4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTS4_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.060e-64
Identity = 109/231 (47.19%), Postives = 151/231 (65.37%), Query Frame = 1
Query:   94 PLDDSVFVRYLRARDGNLDKAAAMLKATLEWRRDFGLPEVLPREMDVIRKENSTGKIYISGFDRVGRPILVMRPRCENTLDHDGNIRHLVYQLERARGILQRLSGGLGKACVIIDYVGFTLRNAPSMKTSMATLNILQNHYPETLGQAYLVTPPVVFKGFWKVIYPFIDKRTKEKFIFVTGSAKSPAAQSLLSINFDMDELEEAIGGKYTTKFDSPVYLAGPMDQDFRASL 786
            PLD +  +RYLRARD ++D A  MLK TL +RR++ + ++  +    +R+EN+TGK Y  GFD+ GR +L M+PR ENT DHDGNI HL+Y +ERA  + +    G+ K  +++DY+ ++L NAP MKTS  TL+ILQ+HYPE LG AYL+ PP +F+  W  I PFID  T EK  FV G A+  A   LL  NFD+DELE  +GG+    F+S +Y+   + +D    L
Sbjct:  128 PLDTACLLRYLRARDYDIDAAEEMLKDTLNFRREYQVGDIPVKFQRQLRRENATGKTYARGFDKRGRVVLYMKPRYENTNDHDGNIVHLIYNMERACAMQRTAGTGVEKFALVVDYLDYSLSNAPPMKTSRLTLDILQSHYPERLGVAYLLNPPWIFRAAWAAISPFIDPVTYEKIQFVVGDAE--AQLGLLRENFDLDELEVDVGGRNRVPFNSKIYIESELGEDIEKIL 356          
BLAST of mRNA_P-lacustris_contig990.16203.1 vs. uniprot
Match: A0A7S2V1P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1P1_9STRA)

HSP 1 Score: 210 bits (534), Expect = 7.520e-64
Identity = 100/182 (54.95%), Postives = 127/182 (69.78%), Query Frame = 1
Query:  229 DVIRKENSTGKIYISGFDRVGRPILVMRPRCENTLDHDGNIRHLVYQLERARGILQRLSGGLGKACVIIDYVGFTLRNAPSMKTSMATLNILQNHYPETLGQAYLVTPPVVFKGFWKVIYPFIDKRTKEKFIFVTGSAKSPAAQSLLSINFDMDELEEAIGGKYTTKFDSPVYLAGPMDQDF 774
            DVIR EN+TGKIY  GFD  GR I+ MRPR ENT +H+GN+RHLVY +ERA  I++    G+ K C++IDY G+ L NAP MKTS ATL+IL ++YPE LG AY V PP +FK FWKV YPFID  TK KFIF+        +Q +L+ NFD+  LE+ +GG+  + FDS VYLA  M  ++
Sbjct:    7 DVIRSENATGKIYCRGFDEQGRVIMYMRPRNENTKNHEGNLRHLVYHMERAIAIMKAKGQGVEKICLVIDYEGYNLHNAPPMKTSKATLHILSDYYPERLGVAYFVHPPWIFKAFWKVFYPFIDPVTKSKFIFLDKPPSHKNSQGVLAKNFDLSVLEQVVGGQAPSDFDSTVYLAAEMHLEY 188          
BLAST of mRNA_P-lacustris_contig990.16203.1 vs. uniprot
Match: A0A7S3M0V5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M0V5_9STRA)

HSP 1 Score: 206 bits (525), Expect = 8.060e-61
Identity = 112/274 (40.88%), Postives = 160/274 (58.39%), Query Frame = 1
Query:   16 ITAEEAGLISQLREAHFPRGTESYGMPLDDSVFVRYLRARDGNLDKAAAMLKATLEWRRDFGLPEVLPREMDVIRKENSTGKIYISGFDRVGRPILVMRPRCENTLDHDGNIRHLVYQLERARGILQRLSGGLGKACVIIDYVGFTLRNAPSMKTSMATLNILQNHYPETLGQAYLVTPPVVFKGFWKVIYPFIDKRTKEKFIFVTGSAKSPAAQSLLSINFDMDELEEAIGGKYTTKFDSPVYLAGPMDQDFRASLSGVSSGAPPKTEVAATA 837
            + A+E   +  +R A    G + +GMP++D  + RYLRAR+ N+ KA  ML+ TL WR++F  P++   +  +I  ENSTGK+Y+ G+D+ G  ++ M+P  ENT DH GNI+HLVY +ERA   +     G  K  ++IDY G+   + P  KTS  TLNILQNHYPE L  AY +  P VF  F++++ PFID  TK+K   +  +     A  L +   D + LE  +GG     F S  Y+A P   D+ + L+GVS+ A P  EVA  A
Sbjct:    4 LNAKEQEALEAMRTAF--DGEDGFGMPMNDLTYGRYLRARNFNVVKATKMLRETLVWRKEFDFPKLYAEDKPIIANENSTGKMYVRGYDKEGSALIYMKPVHENTKDHVGNIKHLVYTMERAIACMDAKGQGCSKLSLVIDYDGYNTSHMPPFKTSTETLNILQNHYPERLKCAYTLRAPFVFYAFFRMVSPFIDPVTKKKICMIKNAEVGKDACQL-NQEVDREVLETCVGGLDERPFVSADYIAAPFHLDYLSILNGVST-AEPAAEVAVVA 273          
BLAST of mRNA_P-lacustris_contig990.16203.1 vs. uniprot
Match: A0A7S0HB85_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HB85_9EUKA)

HSP 1 Score: 197 bits (501), Expect = 8.690e-58
Identity = 114/246 (46.34%), Postives = 146/246 (59.35%), Query Frame = 1
Query:  100 DDSVFVRYLRARDGNLDKAAAMLKATLEWRRDFGLPEVLPREMDVIRKENSTGKIYIS-GFDRVGRPILVMRPRCENTLDHDGNIRHLVYQLERARGILQRLSGGL-GKACVIIDYVGFTLRNAPSMKTSMATLNILQNHYPETLGQAYLVTPPVVFKGFWKVIYPFIDKRTKEKFIFVTGSAKSPAAQSLLSINFDMDELEEAIGGKYTTKFDSPVYLAGPMDQDFRASLSGVSSGAPPKTEVAA 831
            D+ V  RYL AR+  LDKA  MLK TL WR  FG+ ++  R   VIR E+ TGK+ +S   DR GRP+LVM PR ENT DHDG I +LVY LERA G    + G   GK   +ID+ G++LRNA  MKTS ATL+ILQNHYPE L +  L+  P +F   W  + PFID  T+ K +FVTGSA+    Q+ L   FD+ +LEE +GG     +D   Y A    +D   + +G  +  P     AA
Sbjct:   37 DEDVCARYLVARNNRLDKATTMLKETLRWRHSFGVSKLGERHA-VIRTESETGKLRVSDSVDRAGRPVLVMTPRAENTSDHDGQILNLVYHLERATGGRGPVDGAADGKLVTVIDFKGWSLRNAAPMKTSRATLSILQNHYPERLHRFLLLNVPTLFTVLWNAMNPFIDPVTRAKIVFVTGSAEQQ--QAALRECFDLAQLEEGLGGLAPLHWDPAAYFA----RDAELASAGAGAAVPASARTAA 275          
BLAST of mRNA_P-lacustris_contig990.16203.1 vs. uniprot
Match: A0A8J5X440_DIALT (CRAL-TRIO domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X440_DIALT)

HSP 1 Score: 191 bits (484), Expect = 8.450e-55
Identity = 115/270 (42.59%), Postives = 160/270 (59.26%), Query Frame = 1
Query:   13 AITAEEAGLISQLREAHFPRGTESYGMPLDDSVFVRYLRARDGNLDKAAAMLKATLEWRRDFGLPEVLPREMDVIRKENSTGKIYISGF-DRVGRPILVMRPRCENTLDHDGNIRHLVYQLERARGILQRLSGGLGKACVIIDYVGFTLRNAPSMKTSMATLNILQNHYPETLGQAYLVTPPVVFKGFWKVIYPFIDKRTKEKFIFVTGSAKSPAAQSLLSINFDMDELEEAIGGKYTTK-FDSPVYLAGPMDQ-DFRASLSGVSSGAPP 813
            A + +EA  IS LR A          MPLDD+  +RYLRAR  ++DKAAAML+AT+ WR  FG   ++ R ++++R E  TGK +++ F DR GR +L++RPR ENT  ++GNI +LVY LERA  +    +GG  K  + +D+ G+++ NAP MKTS  TL+ILQNHYPE LG+A L+  P +F G ++ + PFID  T+EK  F++ +      Q  L    D   +E  +GG  T   FD   Y A   D    RA     +SGA P
Sbjct:   47 APSRDEASKISSLR-ALLSSEPPCAHMPLDDACLMRYLRARSMDVDKAAAMLRATIAWRHSFGADSIVDR-LELVRTEGRTGKCFVAPFVDREGRTVLILRPRMENTRSYEGNIVNLVYTLERA--VASMRAGGPTKLFLFLDFKGYSMFNAPPMKTSQETLHILQNHYPERLGKAVLLDAPWLFSGAFRALQPFIDPVTREKISFLSTTHAQHVEQ--LGAMVDRAVVETDLGGLLTKPHFDEAAYFAPARDPLQARARAPAPASGAQP 310          
BLAST of mRNA_P-lacustris_contig990.16203.1 vs. uniprot
Match: A0A482SXI4_9ARCH (CRAL-TRIO domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXI4_9ARCH)

HSP 1 Score: 184 bits (468), Expect = 1.130e-53
Identity = 99/209 (47.37%), Postives = 133/209 (63.64%), Query Frame = 1
Query:  163 MLKATLEWRRDFGLPEVLPREMDVIRKENSTGKIYISGFDRVGRPILVMRPRCENTLDHDGNIRHLVYQLERARGILQRLSGGLGKACVIIDYVGFTLRNAPSMKTSMATLNILQNHYPETLGQAYLVTPPVVFKGFWKVIYPFIDKRTKEKFIFVTGSA-KSPAAQSLLSINFDMDELEEAIGGKYTTKFDSPVYLAGPMDQDFRASL 786
            ML+ TL+WR++FGL ++     D I  ENSTGK Y  G+D+ GR IL MRP CENT +HDGN++HLVY +ERA    ++   G  K  ++IDY G++L +AP MKT+  TL ILQ+HYPE L +AY V PP VF  F+ +I PFID  TK+K    T S  K P  +    +  D   LE A+GG+ T  F+S VYL+ P  +D+  +L
Sbjct:    1 MLENTLKWRKEFGLDQMHTWN-DTIALENSTGKTYARGYDKEGRVILYMRPACENTNNHDGNMKHLVYSMERAVACAEK--NGQEKLSLVIDYNGYSLSSAPPMKTARETLTILQDHYPERLHRAYCVHPPFVFWAFFNMISPFIDPVTKQKIYMATNSELKKPDCRYFREL--DKAVLEVAVGGEDTRPFNSSVYLSAPFHEDYLTTL 204          
BLAST of mRNA_P-lacustris_contig990.16203.1 vs. uniprot
Match: A0A8J2SNS6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNS6_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.620e-53
Identity = 105/244 (43.03%), Postives = 157/244 (64.34%), Query Frame = 1
Query:   25 EEAGLISQLREAHFPRGTESYGMPLDDSVFVRYLRARDGNLDKAAAMLKATLEWRRDFGLPEVLPREMDVIRKENSTGKIYIS-GFDRVGRPILVMRPRCENTLDHDGNIRHLVYQLERARGILQRLSGGLGKACVIIDYVGFTLRNAPSMKTSMATLNILQNHYPETLGQAYLVTPPVVFKGFWKVIYPFIDKRTKEKFIFVTGSAKSPAAQSLLSINFDMDELEEAIGGKYTTKFDSPVYLA 753
            +EA LIS L++A      +S    +DD+   RYLRAR+ +L KA  ML+ATL WR  +G   ++  +  +I KE +TGK Y++ G D+ GR  ++MR + ENT DHDGN+ HLVYQ+ERA     +      K  ++ID+ G+  +N P +KTS A L+ +Q+HYPE L +A+LV  P +F G +K+I PFID  T++K +FV GSA+  AA  +L  ++++D+LE+A+GG     +D+  YLA
Sbjct:   12 DEATLISSLKDAVKDEPQDS-SFVVDDACCKRYLRARNHDLTKATNMLRATLRWRAAYGTANIVRDKFPIIEKEAATGKTYVAPGRDKDGRATIIMRSKHENTNDHDGNVLHLVYQMERA----VKACDAEEKWNIVIDFNGYA-KNTP-LKTSKAVLSTMQDHYPERLNKAFLVDAPWLFLGAFKLISPFIDPVTRKKIVFVKGSAEKRAA--VLLEHYELDQLEKAVGGASDYVYDAEAYLA 246          
BLAST of mRNA_P-lacustris_contig990.16203.1 vs. uniprot
Match: A0A7S2HGU9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGU9_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.810e-53
Identity = 104/231 (45.02%), Postives = 140/231 (60.61%), Query Frame = 1
Query:  100 DDSVFVRYLRARDGNLDKAAAMLKATLEWRRDFGLPEVLP-------REM-DVIRKENSTGKIYISGFDRVGRPILVMRPRCENTLDHDGNIRHLVYQLERARGILQRLSGGLGKACVIIDYVGFTLRNAPSMKTSMATLNILQNHYPETLGQAYLVTPPVVFKGFWKVIYPFIDKRTKEKFIFVTGSAKSPAAQSLLSINFDMDELEEAIGGKYTTK--FDSPVYLAGPM 762
            D+   +R+LR   G+   A   LKATL+WR++FG+ +++         EM +V+  EN TGK Y+ G+D+ GR +L MRP  ENT D  G +RHLVY +ERA    +R SG L K  +IIDY GF +R+AP M T+  TL ILQNHYPE+L +AYL  PP++F+ FW +I+PF+D  TK+K +F  G A      S     FDM  +EE  GG       FDS  YL  P+
Sbjct:   66 DEHTALRHLRGEKGDAAVATKKLKATLQWRKEFGVEKLVKCFEEGGDEEMRNVMSLENKTGKCYVRGYDKEGRAVLYMRPVLENTKDEIGQMRHLVYNIERAIACTKRKSG-LEKYNIIIDYKGFRIRDAPPMSTTKHTLAILQNHYPESLYRAYLFNPPMIFRTFWTMIHPFLDPVTKKKILFCHGKAGLKEMGS----KFDMKTVEEFTGGTAGALRGFDSQEYLTSPL 291          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig990.16203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHL3_ECTSI6.350e-15378.36Phosphatidylinositol transfer protein PDR16 n=1 Ta... [more]
A0A835Z4E3_9STRA3.570e-9152.12Phosphatidylinositol transfer protein PDR16 n=1 Ta... [more]
A0A7S1TTS4_9STRA1.060e-6447.19Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2V1P1_9STRA7.520e-6454.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3M0V5_9STRA8.060e-6140.88Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0HB85_9EUKA8.690e-5846.34Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A8J5X440_DIALT8.450e-5542.59CRAL-TRIO domain-containing protein n=1 Tax=Diacro... [more]
A0A482SXI4_9ARCH1.130e-5347.37CRAL-TRIO domain-containing protein n=1 Tax=archae... [more]
A0A8J2SNS6_9STRA1.620e-5343.03Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2HGU9_9STRA1.810e-5345.02Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig990contigP-lacustris_contig990:36246..44499 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.3
Seed ortholog evalue3.4e-106
Seed eggNOG ortholog2880.D7FHL3
Preferred namePDR16
KEGG rclassRC00151
KEGG koko:K01101,ko:K14399
KEGG ReactionR03024
KEGG Pathwayko00627,ko01120,ko03015,map00627,map01120,map03015
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005319,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005628,GO:0005737,GO:0005768,GO:0005811,GO:0005829,GO:0005886,GO:0006575,GO:0006629,GO:0006644,GO:0006650,GO:0006658,GO:0006694,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006892,GO:0006893,GO:0008104,GO:0008150,GO:0008152,GO:0008202,GO:0008526,GO:0008610,GO:0008654,GO:0009058,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010562,GO:0010563,GO:0010564,GO:0010876,GO:0010948,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015914,GO:0016020,GO:0016043,GO:0016125,GO:0016126,GO:0016192,GO:0019216,GO:0019220,GO:0019222,GO:0019637,GO:0022603,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031410,GO:0031982,GO:0033036,GO:0034306,GO:0034613,GO:0042173,GO:0042174,GO:0042221,GO:0042493,GO:0042763,GO:0042764,GO:0042886,GO:0043001,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043900,GO:0043901,GO:0043937,GO:0043939,GO:0043940,GO:0043942,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0045595,GO:0045596,GO:0045786,GO:0045833,GO:0045834,GO:0045936,GO:0045937,GO:0046486,GO:0046889,GO:0046890,GO:0048193,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051093,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051445,GO:0051447,GO:0051641,GO:0051726,GO:0061024,GO:0061951,GO:0065007,GO:0070727,GO:0071071,GO:0071072,GO:0071073,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0080090,GO:0090150,GO:0090407,GO:0097708,GO:0098876,GO:0120009,GO:0120010,GO:1901351,GO:1901352,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901615,GO:1901617,GO:1903725,GO:1903726,GO:1903727,GO:1990778,GO:2000241,GO:2000242,GO:2001245,GO:2001247
EggNOG free text desc.intermembrane phospholipid transfer
EggNOG OGsKOG1470@1,KOG1470@2759
Ec32 ortholog descriptionPhosphatidylinositol transfer protein PDR16
Ec32 orthologEc-24_004150.1
EC2.7.1.78,3.1.3.41
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019
Exons5
Model size1027
Cds size771
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817422.6343904-UTR-P-lacustris_contig990:36245..363351622817422.6343904-UTR-P-lacustris_contig990:36245..36335Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig990 36246..36335 +
1693495056.6192133-UTR-P-lacustris_contig990:36245..363351693495056.6192133-UTR-P-lacustris_contig990:36245..36335Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig990 36246..36335 +
1622817422.700579-UTR-P-lacustris_contig990:44333..444991622817422.700579-UTR-P-lacustris_contig990:44333..44499Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig990 44334..44499 +
1693495056.6952944-UTR-P-lacustris_contig990:44333..444991693495056.6952944-UTR-P-lacustris_contig990:44333..44499Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig990 44334..44499 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817422.6452968-CDS-P-lacustris_contig990:36335..364551622817422.6452968-CDS-P-lacustris_contig990:36335..36455Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig990 36336..36455 +
1693495056.6356368-CDS-P-lacustris_contig990:36335..364551693495056.6356368-CDS-P-lacustris_contig990:36335..36455Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig990 36336..36455 +
1622817422.6568105-CDS-P-lacustris_contig990:42199..423581622817422.6568105-CDS-P-lacustris_contig990:42199..42358Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig990 42200..42358 +
1693495056.6507273-CDS-P-lacustris_contig990:42199..423581693495056.6507273-CDS-P-lacustris_contig990:42199..42358Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig990 42200..42358 +
1622817422.6710768-CDS-P-lacustris_contig990:42987..431971622817422.6710768-CDS-P-lacustris_contig990:42987..43197Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig990 42988..43197 +
1693495056.6631427-CDS-P-lacustris_contig990:42987..431971693495056.6631427-CDS-P-lacustris_contig990:42987..43197Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig990 42988..43197 +
1622817422.6812296-CDS-P-lacustris_contig990:43723..438461622817422.6812296-CDS-P-lacustris_contig990:43723..43846Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig990 43724..43846 +
1693495056.6736028-CDS-P-lacustris_contig990:43723..438461693495056.6736028-CDS-P-lacustris_contig990:43723..43846Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig990 43724..43846 +
1622817422.6910095-CDS-P-lacustris_contig990:44174..443331622817422.6910095-CDS-P-lacustris_contig990:44174..44333Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig990 44175..44333 +
1693495056.6846242-CDS-P-lacustris_contig990:44174..443331693495056.6846242-CDS-P-lacustris_contig990:44174..44333Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig990 44175..44333 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig990.16203.1prot_P-lacustris_contig990.16203.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig990 36336..44333 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig990.16203.1

>prot_P-lacustris_contig990.16203.1 ID=prot_P-lacustris_contig990.16203.1|Name=mRNA_P-lacustris_contig990.16203.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=257bp
MPLDDSVFVRYLRARDGNLDKAAAMLKATLEWRRDFGLPEVLPREMDVIR
KENSTGKIYISGFDRVGRPILVMRPRCENTLDHDGNIRHLVYQLERARGI
LQRLSGGLGKACVIIDYVGFTLRNAPSMKTSMATLNILQNHYPETLGQAY
LVTPPVVFKGFWKVIYPFIDKRTKEKFIFVTGSAKSPAAQSLLSINFDMD
ELEEAIGGKYTTKFDSPVYLAGPMDQDFRASLSGVSSGAPPKTEVAATAT
TTTATS*
back to top

mRNA from alignment at P-lacustris_contig990:36246..44499+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig990.16203.1 ID=mRNA_P-lacustris_contig990.16203.1|Name=mRNA_P-lacustris_contig990.16203.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=8254bp|location=Sequence derived from alignment at P-lacustris_contig990:36246..44499+ (Pleurocladia lacustris SAG_25_93)
GTGCAGCCCGGGGCCATTACTGCCGAGGAGGCCGGCTTGATCAGTCAGCT CCGTGAGGCCCACTTTCCCAGAGGAACGGAGTCGTACGGAATGCCGCTTG ATGACTCCGTGTTCGTCAGGTACTTGCGAGCTAGGGATGGGAACCTTGAT AAAGCTGCAGCGATGCTGAAGGCTACACTTGAATGGAGACGTGACTTTGG TTTACCCGAGGTGAGTTTGGTAGTGGTAGCGTTGCACATGTATTGCACGA GCTGCGTGTTGGCCATAAACGGCAGTCTTTTCCTTTCATGTCGTGCTCGC CGTCCGAAGAATTATACTGCAAGTATCTACAATTTGTAAGGCTCCGATGG GGGCTTCACCCCCCGATCCTGCAGAACTATGGTTGGTTGGAATTATGGTG ATTGAAGATGGATGGTACATAGTACATGTGTGTGTTTTTCGTCCCCTTTA TTTTGGCTACAGTCCCTCCGATCAAGGTGAGACGTGTATGACACGTTCGG GTGTTTTGGGTGTATTTTTCTGTCCAACTAGACTATTGTAGAACCAACCG GGGTCATCACACAGCAGAGGGGGTAAGCACACGTTTTTTTTTTCTTCTTG CCCCACCTTCCTCCTGCGGTGCTGCCTTAATTTTTATCGCGAGAAGGGTT CAGCCGTCCCTTTCCCTCGTCAACGGTGCTAACGTCGAAGTTTGGTACTC ACGAGCTTTTCAGCTTTTTCGCTCTCACCCGCAAATTTGCAATTTTTTCA CCCCATGGGGACTCGAACTCAGTACCACTAGCCACCGGGGCGACCGGTTA GGGTTAGGGTTAGTACAAGTAGTGCTAAAACTGCATACCAAACCATAACA TTGACGTGATTTGTTTAAGGCCGCACACCAAGTGGAAGGTTTTGTTCGCT CAGGCTACCCTGATACCGCCAGACACATTGTCGCTTCCGGGGACGGAACA AAAGGTTGTTATTGTTGTCTTCACATTAAAATCGTATGTCAGTTGGTTTG GAAATCCCAACATCTATCTATCCAATAGCAAAGACTCTCGGTCCGTGGTC ACAAAAGCTATTTGTAGAGCCATCAGAGGATCTAAAGAACACGCACCCTG AGCAAGAAAAGGGTACACAAGTCCGACGAGGTACACCTGAAATCCCTGCA GCGTAATGCGTGCACAAGGCTGAACTACTACACGTCCGTACACCTCATTC GACTACAGCAGCATCCCCCCTGTCCCACTCTTTACCAAAGTGAATGTTTG CCGCCTACCTACAGCGTTGCTGACTACAGCGTGTTGCTGTCTGGAGTGCT GTCTGTACAAAAACACCGCCGTGGTAGGCATGAAACCAAGAAGCTGGGGC ACGCAGCTGCTGTCTGAAGTGCTGTGAGAATGCCTTCGCGGACACACAGT AGTAAAAAAGAACAGCAACAAAAGAGCCATCATTGAAATTGACAATCACC CGAATCTATCCCATCGTCTGCGTTAGGTACAGCGGTGCAAACATCGACAC TGATTAGGGATCGTTCCACATTCGCATTGAAGGGGTCTTCCACGATACAG GTGCACAATTAAGGCACCCGGGTTATCCGCGCCATCTCTGCCGCGTCTCT CTACAAAACCAGTGACGTCATCACACACCCAACACCTATATTCAGGGAAA ACGAAAATGATTGACAACACATAATGTTTGTCCGTGCGCCACGGTTCGAT GTCGAATACCGCTGCTTCGGTGCCGCTGCTCCGGTGCCTCTGTGGCCATT CCTAGCACGACCACACTCAACCCGCTCCGTCCGTACACGCTCTCGTTGCT GTACTTCCCAGTCGGTTCCTCGCTTTCTCCCTCGTTGCATTTAGGGTTCT TGGTCTGAAAAATAAGAAATCTCGCGCCGAAGGGGTCAACCAGCCCAATC AGCTCGTCGCCACCTGCTCCCTCCTCCTTGGATGGCGAAGCCAGGTTACT GAGACATTACAGCTCCCTCTAGCAAACCTAGGGCAGTGTACAGTGTCCGT CCACCTTTCTGGTGGTGTCTACCTCCGCGCGCAAAAATGAAAAGGCAGAC AATAAAAAGAAATGGAAAAGAAAAGCGGATTTTTTTTTTTCAGGGAAATC TCGAAACAAACCTTCGACCTCGGACGTTTGTTTGAGTTTGACACCTCTTC GTTGCGGTGGTAGTGCATCACATCACGACGTGTGCGTGTCAGCGTTTGTC ACTGCTCTGTGTGCACACAAAGCGCGCGCTTCACATCACGACGTGCGCGT GTCAGCGTCTGGCTGCTGGTGTGTACGCACACAAAGCGGTTCATTTAGCG GGTAATTTTTAGGCCCCCCATCCTGCGCGCAGAATTCTGGTTCGTCGGAG TGGTGGCGATTGAATGATGAATGGAGCCTTGAAATGTTAAAGCCGCATAC TACGCCAAGTGGCATACGTACGTATATAACATTGACGTGATATGTTTCAA ATCACATAACAAGTGGAAGGTTTTGTAAACGGAGGCTACTCCCCTCTGTC CTCCGTTAATAAGATGTGACCCACAACGTTGACGTGGTATATGTCACGGC ATACCAAGTGGAAGGGGTTGTATGCATAACAAGGTTAGTGTTGTGGTAAT ATCTTGTCTTCCAGGATTAGGTTATCGCATCCGGACGGTTGGATCTACAG ATCTATAGTGGTGGTATTTAGGAACAGTTTGAGTTTTGGTGGATTGGGCA CGAAGGGGCTTGAGCGAAGACTTCTGACCTCTTCGTCCCTGGTTGCCCTC CCCACGTGCCCACTAGTTGTCTGTCACCTGAGCGAGCAGAGCGAGCTACA GTAAACACCCAAGTGAGTCTTAAATAAGAGAATGGAGACGTTCGACACAT ACATGCTACGGTGGTCGGGTTCGCCCCACACTGCCTAGAGTTCCATCACA TTAGCATACAGAAGGAAAATGACTTTTTTTTTCAGGAAAATTGAAAAATG TATTTTTGGTGTTATGTAAAGGTTTCTACACACCAACCGCAGGGGGGTGT GAATCCCCAGCTCTCGGACAGACAGTAGGTAGGAGAGCCCTCTCGGGAGC AGTGGTAGGTTGTGAGCGTGAGTGCTGAGAGCAGTCACACGAGACAGACA AGATGCTCTAGGAAGAGGCAAGGAGCGCCGGATCTTGGGGAAGAGAAGGA AAAAGTAGAAGTGACAAAAGAGGGCCGAGTGGGGCTGTGCACAGCACAGC AGTTCCATCGCAGAATAAACCACGTACCACACGCACAACTTGGACAGCGC TGATGGGCTGGATCGTGGTGCACGATCTAGAAACGCATACACACAGCGGA GAGACATGTGTGTGCGAGTTCCACAGAATGGTGCGAGTTCCATAGAACTG AACGGGTTGATGGGTTTCCCAAGTATGGGCGTGGGTTCTCAGAGTCATCG GGTACTCACATCACCCCCCAGTTTTGGTAGTGTTAGAGCTCGTACACACC AAAACTCAAGCAGCGATGAGTATCGGTGCGTTGAGAGTACGCCCTTCTTA CACGACTTGAACCACTCAAATCATTACGTGGCAGGATCTTTTTCCGAAAA TTATAACCGAGCGCTGAAAGTGGTGGTACGGCCTCTAGCAACATTAACGG CTTCGTGGTTACGAGCACGTTCGACAACCTCACGGAGGGACTTGGGCGGC TTATCGGCGGACAGTAATTTGTTGACACATAAGATATCAAGCCATGCTGA TGCAAAGTGATAGAGAGTGCAGTGTATGGGCAACTTCCAGGGGTTTCAAG CTAGACGGCCCCTTCGAAACGAGTACACTCGTTGCGAAAGCGAAGGGTTG ACGAACTGACAGATTCGTTTTGAGGGGCGAGTGGGGCTGCGCACAGCATT TATATCGCAGAACACACCACGTGGGACACATACCACGTGGACAGCGCTGG TAGGCTGGATCGTGGTACACACATCTAGAAGCGCATACATACAGTGGAGT AACTTGTGTGCGCGAGTTCCATAGAACTGAGCGGGTTGACGGGTTTCTCA AGTAAGGGCGTGGGTTCTCAGAGACACCGAGTACTCACATATGTATCATG TTAATAATTAAAGATATAATCGTCGTCTGCCGTTGACTAGAAATTAGACA AGACAAAGTCGTCGTCCGCCGTTTACTAGAAATTAGACAAGGGTTCATTT TTTTTTTTTTTCACGGAGCACAAAGTCGCCGCAAGTGCACAACACCGAGT CAGAACTGAACACACCCCTCCTCTAGGCATACCTGCCTGAGCGAGAGACA GCACTCGCACAACTCTCAAGGTGCTGGACCTGTTTGCGGGTGTGCGGGCG AGGAGACACACTGCTGTTGTACAACGTGAGATCCAGAACTCCGCAGTGTA GACCGACGACAGCAAACATTTTCCACTGTTGTACTCGCCATCAGAGCCTA AACTCCTCAAATGCGGGTCCACAGCGGTAGGTAGTGGTACCAATAACTGC TGTGGGCCCGCACAGGGGGTGAGTTGTGGAGAGCCGCAGCATTCGGCAGC GGTACCTCCAGAACTCCGCTTGCATGTGAAGCACGTAGTCCGCGTCTGTC TACGCACAAAACTCCTTCTGTGCGCTGTTCGTTTTCCGCTACCGTGTGCA TAGTTGGACTCTACAGCAAAGCTACACGGACGTAGGGTCACAACCTCCAC GCACAGATGCTTGCGTACAACACGTGTTCGACAGAGAACGGACAGCAGTA TTCGTGCGAGCGTGGCAATGGTGGTGGTCAGTACGACATGTACAACCCTT GCCTTTCTCGCATCATCACACAGACATCATGCGGAGCAAACACAATCGAC GTACAGTATACCACACACACATTGCCTTGTCCTCCTGTCAACAACGGTAT AAACATTCTCTACACTCGTCTAACCACATTTTACGGGGGCAATCCCCATG CTTCATGCACAGAGGCCCGCATTAGCCACAACGACCATCCGCGACACGGA ATTTTCTCGTATCGTTCTGAAGCAAACACTAAACACGATTTGTTTTGCCC TACACGTTAACATCTTTCGTGTTTACTTGCGCACCACGCCTACGTTCTTC ACGTCATTCACCTTCTGGCCCCGCCGCCCACTCGGTGCGGGGGGCCTTCG GCTCTGCGGCCTCACAGACGTTCCGATTATGACGCTTGAGTTTTGACACC TTTTGGCAGTGGTAGGTAGGGATAAAGCTGAAAGACATGAGCGCTTCACA TTGCGACGTGTGCGTGTCAGCCTCTCTCTGCTGTGTGCGCACACAAAGCG GGCAATTTAGCGGGCATGGTGTCGCAGACACGAGCGCTTCACATCACGAC GGGTGCATGTCAGCGCCTGTCTGCTGTTTATGTGTGCACAACAGAAGCGG GCCATTCACGGGCCATTATTTTTGCGGCCAGGCGAATCTTTTGGCGCATC TTTTCGTAGACGCCGTTCAGGGCGCCGATTCCTTACAGTGCCGCGCCGAA GCGAAACCTTTCTTGCTTGCACTTGAGCGATCCAAAAACATGTGGATGTG AGAGTTGAGTGTTTGGGAGACTCTCTGAGAGACGAGAACCCTCAGGTTCT GAGCTCTCAGGGCTCGAGAGCGTTTGCGTTAATCCTATCTACCTCTATGC ATTGCCTACTAATGTAGAATGTTCTGGCGCAGCCACGGTGTCTTCTTACA TTGGTATCACACACGAAAGCGGCGCTCGAGACTCCGGGAGGTGTGTTTGA AGCTCCTTTGCTGCTGTCGTATAGGTTCCATAGCAATTCGACTTCATGAT TTTTCTTAGCTTCGTTTATCGGTTCCATCCTCGTTGCGGACCATCATGGT TTGGTGGAGCCCCAGCCCCACGTGATCGACGCGCGTTTGCTGGGGAAACG CTTGGCCGATCTGTACGGATGTTTGTGTCGAAAACTGAATGCAGCCACTC TTTCCCATACCACCTCGCCCATGGATCCTGTATAATCATCGATGGTATTT TTAGGTTTTGCCCAGGGAGATGGACGTTATCCGAAAAGAAAACTCCACGG GTAAAATCTACATTAGCGGATTCGATAGGGTGGGCCGACCAATCCTCGTC ATGCGACCGAGGTGCGAGAACACCCTGGATCATGACGGAAACATCAGGCA CCTCGTTTACCAGGTAACACAACGCGACGCAACGTACTTGCGACCTTTTT GTTATCAAGCTTGTGTGTGTGTTCGTTGAAAGGGAGAACAAGCAGACGAC TGACTCAAGTCAGGGAACTGACTGAGGTGATCAACGAAACATAGGGATTC GTTAGTTGGTCAATTTTCGAACTGAATAATTGATCTTCCCCAAGCAGGGC GGTGTTTGTGTCTCCTTGTCTCTCGCTTCAATCCGCTGCGAAGTTCATTT AAATAACACGACAGACGTTGTAAACCTCAGATGCGAAGCCATCGATCGGC CGCTCTATGCCATACACAACGCAGACCCACCCACGTTCGCTGATACCGCT GATGTACTCCTGCACTGCTGTGCTGCACCCAAACATGGAGGCTGCATAGT GCTATGGTGACTCGCAGAAGGTGTCACGCAGGCTTAGAAATAAGGCTGCA CGAGCTATGCCTCATTTTGTTTTTCACGCGACGGGCTTCTGCTTTTTCAC ATGTCACGCCCCACCAAACAAAACCATGCGGTTATTATCCCATGGTGTTT TCGCGCACAGCAGGCATTGCACTGCATTGCAGCCCCGTTATTAAATCTCT ATACACTCTACTATGCTGCCGTTGCTCTGTCTCTCGTGTCAGTTGGAGCG TGCGAGGGGGATCCTTCAGAGGTTATCCGGTGGTCTGGGCAAGGCCTGCG TTATCATCGATTACGTCGGGTTTACGTTGCGCAACGCCCCGTCGATGAAG ACAAGCATGGCCACCCTCAACATCCTTCAGAACCACTACCCGGAAACGCT TGGGCAGGCATACCTCGTGACGCCCCCCGTGGTCTTCAAGGGCTTCTGGA AGGTGAGGCAATACTTGGGCAAATACTTGCTTTTGTAGAACGACTTCCTT GTAAAGCCGCAGGTAAGTATGCAGCTGGCGCGGCTCAACTAGAATAATTA AACGAATGGCGAGGGCATAGGAGCCATCACATTCGCTGCAGTTGCCTGCT GCCCGAAACCCCTTGACTCGCATGGGGTAGGCCCCTCGGTGCCACAACAA ACCTGAGCTCACCGTGGTCTCCCCAGCGGAGAAAGTTGGCATGTTGCCTG TGTAGCTGCAGGGGCTGTGTTTGGTCTCTGTCTGTGTGCACGCACTACCG AGAGTGTTTTTGTTTTTTCTTTGCCACAGTGAGGCATATATTTTTTGTGG CACTTCGCAAGCTGAGGACTCAAAAAAGGCGCCCGCGAGCTCTCCCTCTC ACTGTCGCCAGTATATAGCTTCCTGCGATGCAAGCATCGCTCGCAGCACC GTTCCCCTTGCTTTTTGTGTGCGTCTCAATCTCTACGATGTCCGCATATG TGTCATGGCACGTTTCACACCGGTGCAGGTGATCTACCCCTTCATCGACA AACGCACGAAGGAGAAGTTTATCTTCGTTACGGGCAGCGCGAAATCTCCA GCTGCGCAATCCCTCCTCTCCATAAATTTCGACATGGATGAACTCGAGGA GGTGATTTCAACGAACTGCTACTACCTTGAGTGCGTCGTGTGCATCACTC ACACAGCAGTTTTTTGTTTTTGCGAGCATGCTTGCATGAGTTTTTTCTGT TTCGCTGCTGCAAACGTCGACCGGCTTGTACTTCTCGTTTCTGTGCGTCG ATGGCCTGCCCGGATATTCTCGGTGTGTGCATAGCAGCCCCTCACCCCAA TATTTTTCTAGCCGGTCTTGCTCATGACCACAAACAGCGCCATCCTCGTT GGTGCGCATACACCGCGCTACGAGACACGTCCAACCACTAACTATCCTTC GTCGCCCCCCCCACCCCCATCGCCTACAGGCGATCGGAGGCAAATACACA ACAAAGTTCGATTCCCCGGTTTACCTGGCGGGGCCTATGGATCAAGACTT CCGGGCATCCCTTTCAGGAGTATCATCCGGAGCGCCTCCAAAAACGGAGG TCGCTGCCACAGCCACTACCACGACTGCAACCAGCTAACAGCAGCCGGCG ATCGAGCGTTGCATCTACGAGCATACAGAAGTAGCGGAGAGGAACGCCAC ACGCTGGCGGCCGTTCGATGTTGGAATAAACGGTGCAAGACGTGGGAACC TAAATTGTGGATCGGAGCATCTGCTGTTCGATCAAACGGAACCAATCTGG GATG
back to top

Coding sequence (CDS) from alignment at P-lacustris_contig990:36246..44499+

>mRNA_P-lacustris_contig990.16203.1 ID=mRNA_P-lacustris_contig990.16203.1|Name=mRNA_P-lacustris_contig990.16203.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1542bp|location=Sequence derived from alignment at P-lacustris_contig990:36246..44499+ (Pleurocladia lacustris SAG_25_93)
ATGCCGCTTGATGACTCCGTGTTCGTCAGGTACTTGCGAGCTAGGGATGG
GAACCTTGATAAAGCTGCAGCGATGCTGAAGGCTACACTTGAATGGAGAC
GTGACTTTGGTTTACCCGAGATGCCGCTTGATGACTCCGTGTTCGTCAGG
TACTTGCGAGCTAGGGATGGGAACCTTGATAAAGCTGCAGCGATGCTGAA
GGCTACACTTGAATGGAGACGTGACTTTGGTTTACCCGAGGTTTTGCCCA
GGGAGATGGACGTTATCCGAAAAGAAAACTCCACGGGTAAAATCTACATT
AGCGGATTCGATAGGGTGGGCCGACCAATCCTCGTCATGCGACCGAGGTG
CGAGAACACCCTGGATCATGACGGAAACATCAGGCACCTCGTTTACCAGG
TTTTGCCCAGGGAGATGGACGTTATCCGAAAAGAAAACTCCACGGGTAAA
ATCTACATTAGCGGATTCGATAGGGTGGGCCGACCAATCCTCGTCATGCG
ACCGAGGTGCGAGAACACCCTGGATCATGACGGAAACATCAGGCACCTCG
TTTACCAGTTGGAGCGTGCGAGGGGGATCCTTCAGAGGTTATCCGGTGGT
CTGGGCAAGGCCTGCGTTATCATCGATTACGTCGGGTTTACGTTGCGCAA
CGCCCCGTCGATGAAGACAAGCATGGCCACCCTCAACATCCTTCAGAACC
ACTACCCGGAAACGCTTGGGCAGGCATACCTCGTGACGCCCCCCGTGGTC
TTCAAGGGCTTCTGGAAGTTGGAGCGTGCGAGGGGGATCCTTCAGAGGTT
ATCCGGTGGTCTGGGCAAGGCCTGCGTTATCATCGATTACGTCGGGTTTA
CGTTGCGCAACGCCCCGTCGATGAAGACAAGCATGGCCACCCTCAACATC
CTTCAGAACCACTACCCGGAAACGCTTGGGCAGGCATACCTCGTGACGCC
CCCCGTGGTCTTCAAGGGCTTCTGGAAGGTGATCTACCCCTTCATCGACA
AACGCACGAAGGAGAAGTTTATCTTCGTTACGGGCAGCGCGAAATCTCCA
GCTGCGCAATCCCTCCTCTCCATAAATTTCGACATGGATGAACTCGAGGA
GGTGATCTACCCCTTCATCGACAAACGCACGAAGGAGAAGTTTATCTTCG
TTACGGGCAGCGCGAAATCTCCAGCTGCGCAATCCCTCCTCTCCATAAAT
TTCGACATGGATGAACTCGAGGAGGCGATCGGAGGCAAATACACAACAAA
GTTCGATTCCCCGGTTTACCTGGCGGGGCCTATGGATCAAGACTTCCGGG
CATCCCTTTCAGGAGTATCATCCGGAGCGCCTCCAAAAACGGAGGTCGCT
GCCACAGCCACTACCACGACTGCAACCAGCTAAGCGATCGGAGGCAAATA
CACAACAAAGTTCGATTCCCCGGTTTACCTGGCGGGGCCTATGGATCAAG
ACTTCCGGGCATCCCTTTCAGGAGTATCATCCGGAGCGCCTCCAAAAACG
GAGGTCGCTGCCACAGCCACTACCACGACTGCAACCAGCTAA
back to top