mRNA_P-lacustris_contig99.16191.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig99.16191.1
Unique NamemRNA_P-lacustris_contig99.16191.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
[Close]
BLAST of mRNA_P-lacustris_contig99.16191.1 vs. uniprot
Match: D8LNS7_ECTSI (Mitogen-activated protein kinase (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS7_ECTSI)

HSP 1 Score: 649 bits (1673), Expect = 2.740e-225
Identity = 335/377 (88.86%), Postives = 341/377 (90.45%), Query Frame = 2 
Query:  329 GVLG-EERRIGVDGEMVRSRGQAGDVLQPKG**ASKGDA*AQRGSRLKKIATKEHAFHVVSDKQALTVNALSSSDREQWMRAIADKVQQLKDALVVLPKRKGTRMISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSLAEFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAEYGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPRDESELAFVTNPKAQKFMEDLPEYPRG-LEEAFP 1453
            GV G  ER   ++G+ V    Q GD   P+      G      GSRLKKIATKEHAFHVVSDKQALTVNALS  DREQWMRAIADKVQQLKDALVVLPKRKGTRMISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSL +FNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAEYGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKP+DESELAFVTNPKAQKFMEDLPEYP   L   FP
Sbjct:    9 GVSGWTERWFVLEGKRVMYYNQKGD-RHPR------GTLELNAGSRLKKIATKEHAFHVVSDKQALTVNALSGDDREQWMRAIADKVQQLKDALVVLPKRKGTRMISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSLTDFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAEYGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPKDESELAFVTNPKAQKFMEDLPEYPPADLRRRFP 378
[Close]
BLAST of mRNA_P-lacustris_contig99.16191.1 vs. uniprot
Match: A0A835Z2Y5_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y5_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 1.690e-130
Identity = 206/378 (54.50%), Postives = 275/378 (72.75%), Query Frame = 2 
Query:  326 GGVLGEERRIGVDGEMVRSRGQAGDVLQPKG**ASKGDA*AQRGSRLKKIATKEHAFHVVSDKQALTVNALSSSDREQWMRAIADKVQQLKDALVVLPKRKGTRMISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSLAEFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAE-YGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPRDESELAFVTNPKAQKFMEDLPEY-PRGLEEAFP 1453
            GGV  ++R   ++  +V    + GD   PK     +G       SR+  + T+ HAF V+++ +AL V A +  +++ W   +  +++ L++       R+ TR+++A  T FE+D  Y   KP+GHGAYGVVISA++  +NSKVA+KKIP AF+D++DAKRIVRE+RLLR  +H N+IKIVDILPPPSL +F DVYI+SELM+TDLHRVIYS Q+L+D+H++YFLYQ+LC +KYIHSASVLHRDLKPSN+LL+ NCDLKLCDFGLSRGV+   E +T +LTEYVVTRWYR+PEIML+ + Y   ID+WSVGCIF EML R+PLF G  Y+  LKLI K +GKP  E++L FV+NP+A++FM  LP+  P  L   FP
Sbjct:   19 GGVSWKKRWFTLEDHVVTYYSRQGD---PK----PRGRMVLNAESRVTNLPTRPHAFQVITNSKALMVFADTPEEKDHWYGTLQTQIEALQERAAQRRTRRDTRVVNAAGTDFELDVKYEMIKPIGHGAYGVVISAINHENNSKVAVKKIPGAFEDLIDAKRIVREIRLLRHFNHENVIKIVDILPPPSLNDFEDVYIISELMETDLHRVIYSRQKLTDEHIQYFLYQLLCALKYIHSASVLHRDLKPSNVLLNANCDLKLCDFGLSRGVTG--EHDTVDLTEYVVTRWYRAPEIMLSVQNYNEAIDVWSVGCIFGEMLGRKPLFPGNDYIHQLKLITKLIGKPA-EADLWFVSNPRARRFMLGLPDTAPADLAARFP 386
[Close]
BLAST of mRNA_P-lacustris_contig99.16191.1 vs. uniprot
Match: D8LNL4_ECTSI (Mitogen-activated protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNL4_ECTSI)

HSP 1 Score: 409 bits (1051), Expect = 2.750e-130
Identity = 213/378 (56.35%), Postives = 274/378 (72.49%), Query Frame = 2 
Query:  326 GGVLGEERRIGVDGEMVRSRGQAGDVLQPKG**ASKGDA*AQRGSRLKKIATKEHAFHVVSDKQALTVNALSSSDREQWMRAIADKVQQLKDALVVLPKRKGTRMISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSLAEFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAE-YGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPRDESELAFVTNPKAQKFMEDLPEY-PRGLEEAFP 1453
            GGV  + R   ++  ++    + GD L+P+G      +      SR+  + T+ HAF V+++ +AL V A +  +RE W+ A+  +++ LK+  +    R+  R ++A  T FE+D  Y   KP+GHGAYGVVISALD   N+KVAIKKIP AFDD+VDAKRIVRE+RLLR  +H N++K+VDILPP SL +F+DVYI+SELM+TDLHRVIYS QRL+D+H +YFLYQILC +KYIHSASVLHRDLKPSN+LL+ NCDLKLCDFGLSRGV   DE ET +LTEYVVTRWYR+PEIML+ + Y   ID+WSVGCIF EML R+PLF G  Y+  LKLI   +GKP  ES++ FVTNP+A++FM  LP+  P  L   FP
Sbjct:   26 GGVQWKRRWFILEDHVITYFSKQGD-LRPRGRMVLIAE------SRVTNLPTRVHAFQVITNAKALMVYADTLEERESWVAALNQQIKGLKERALQRRSRRNVRAVNAAGTDFELDLKYEMIKPIGHGAYGVVISALDHESNNKVAIKKIPGAFDDLVDAKRIVREIRLLRHFNHENVMKVVDILPPSSLEDFDDVYIISELMETDLHRVIYSRQRLTDEHTQYFLYQILCALKYIHSASVLHRDLKPSNVLLNANCDLKLCDFGLSRGVH--DEHETGDLTEYVVTRWYRAPEIMLSVQNYNEAIDVWSVGCIFGEMLGRKPLFAGNDYIHQLKLITSLIGKPT-ESDIWFVTNPRARRFMLGLPDTSPVNLGVKFP 393
[Close]
BLAST of mRNA_P-lacustris_contig99.16191.1 vs. uniprot
Match: A0A6V1P443_HETAK (Mitogen-activated protein kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P443_HETAK)

HSP 1 Score: 401 bits (1030), Expect = 4.360e-129
Identity = 209/381 (54.86%), Postives = 276/381 (72.44%), Query Frame = 2 
Query:  326 GGVLGEERRIGVDGEMVRSRGQAGDVLQPKG**ASKGDA*AQRGSRLKKIATKEHAFHVVSDKQALTVNALSSSDREQWMRAIADKVQQLKDALVVLPKRKGTRMISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSLAEFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETA---ELTEYVVTRWYRSPEIMLAAE-YGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPRDESELAFVTNPKAQKFMEDLPEYPR-GLEEAFP 1453
            GGV  ++R   +    +    + GD  +P+G      D      SR+  + ++ +AF V+++ +AL V A +  +R+QW++A+   V +LK+        + T+++SA  T FE++D Y   KP+GHGAYGVVISA +T + +KVA+KK+P+AF+D+VDAKRIVRE+RLLR  +H NI+K+VD+ PPPSL +F DVYIVSELM+TDLHRVIYS QRL+D+H++YFLYQILCGVKYIHSA+VLHRDLKPSN+LL+ NCDLKLCDFGLSRG++  DEE  A   +LTEYVVTRWYR+PEIML+ + Y   ID+WS+GCIFAEML R+PLF G  Y+  LKLI K VG P  E EL +V NP+A++FM  LP  PR  L   FP
Sbjct:   20 GGVSWKKRYFMMKDHTITYFSKQGDA-KPRGRMVLNSD------SRVTNLPSRPNAFQVITNNKALMVFADTFEERDQWVQAVNKVVSELKEQKEQKKTDRNTKVVSAAGTDFELEDKYEIIKPIGHGAYGVVISAQNTENGTKVAVKKVPNAFEDLVDAKRIVREIRLLRHFNHENIMKVVDLPPPPSLTDFEDVYIVSELMETDLHRVIYSRQRLTDEHIQYFLYQILCGVKYIHSANVLHRDLKPSNVLLNANCDLKLCDFGLSRGLN--DEETPAANGDLTEYVVTRWYRAPEIMLSVQDYSRAIDVWSIGCIFAEMLGRKPLFPGNDYIHQLKLITKVVGTPT-EDELGYVENPRAKRFMLGLPPTPRVDLSTKFP 390
[Close]
BLAST of mRNA_P-lacustris_contig99.16191.1 vs. uniprot
Match: A0A7S2CTH5_9STRA (Mitogen-activated protein kinase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTH5_9STRA)

HSP 1 Score: 345 bits (886), Expect = 1.260e-109
Identity = 170/273 (62.27%), Postives = 215/273 (78.75%), Query Frame = 2 
Query:  641 ISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSLAEFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAE-YGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPRDESELAFVTNPKAQKFMEDLPEYPR-GLEEAFP 1453
            +SA    FE+D  Y   KP+GHGAYGVVISA+D   N+KVAIKKIP+ F+D+VDAKRIVRE+RLLR  +H N+IK++D+  P    +F+DVYIVS+LM+TDLHRVIYS Q+L+++H+++FLYQ++CG+KYIHSA+VLHRDLKPSNILL+ NCDLKLCDFGLSRG+   +    A LTEYVVTRWYR+PEIML+ + Y   ID+WSVGCIF EML R+P+F G  Y+  LKLI K VG P  ESEL FVTN KA +F+  LP+Y +  L ++FP
Sbjct:    1 VSAAGQDFEMDSKYEMIKPIGHGAYGVVISAVDHEFNAKVAIKKIPNTFEDLVDAKRIVREIRLLRHFNHDNVIKVLDLFTPQPHDDFSDVYIVSDLMETDLHRVIYSRQQLTNEHIQFFLYQMMCGLKYIHSAAVLHRDLKPSNILLNANCDLKLCDFGLSRGLLEGEGTSGANLTEYVVTRWYRAPEIMLSCQDYSCAIDVWSVGCIFGEMLARKPMFPGSDYIHQLKLIMKLVGTPT-ESELWFVTNQKANRFVLSLPKYDKEDLSKSFP 272
[Close]
BLAST of mRNA_P-lacustris_contig99.16191.1 vs. uniprot
Match: W7U818_9STRA (Mitogen-activated protein kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U818_9STRA)

HSP 1 Score: 355 bits (910), Expect = 1.290e-109
Identity = 187/362 (51.66%), Postives = 245/362 (67.68%), Query Frame = 2 
Query:  425 ASKGDA*AQRGSRL------KKIATKEHAFHVVSDKQALTVNALSSSDREQWMRAIADKVQQLKDALVV-------------------LPKRKGTRMISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSLAEFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAA-EYGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPRDESELAFVTNPKAQKFMEDLPEYPR 1432
            A KGDA  +    L         ++K++ F +V+  +   +NA +  D+  W  A+   ++ L+                        L  RK T++     T F +D  Y   KP+GHGAYGVVISA D +   KVAIKK P+AF+D+VDAKRIVRE+RLL    H NI++++D+  PP +A+F+DVYI+SELMDTDLHRVIYS Q+L+D HV++FLYQ+LC +KYIHSA+V+HRDLKPSNILL++NCDLK+CDFGLSRGV     +E ++LTEYVVTRWYR+PEIML+  EY   ID+W+VGCIF EML R+PLF G  Y+  LKLI K VG P  E ELAFVTN KA++FM +LP+ P+
Sbjct:   58 AKKGDAKCRNQMALTAQSVFSSSSSKKNGFSIVTAGKGFQLNAETPQDKHAWAVAVTSAIRSLQAQQAGSGGMTSSSSGRSLSRSSSGLRGRKNTKIFYVVGTEFVLDARYELIKPIGHGAYGVVISATDNQLGQKVAIKKCPNAFEDLVDAKRIVREIRLLMHFQHENIVRVLDLQAPP-VADFDDVYIISELMDTDLHRVIYSRQKLTDDHVQFFLYQMLCALKYIHSANVIHRDLKPSNILLNSNCDLKICDFGLSRGVMPVGTQEASDLTEYVVTRWYRAPEIMLSCPEYTTAIDVWAVGCIFGEMLGRKPLFPGNDYIHQLKLITKLVGTPSAE-ELAFVTNHKARRFMLNLPKEPQ 417
[Close]
BLAST of mRNA_P-lacustris_contig99.16191.1 vs. uniprot
Match: A0A067CUZ6_SAPPC (Mitogen-activated protein kinase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CUZ6_SAPPC)

HSP 1 Score: 344 bits (882), Expect = 1.840e-108
Identity = 173/279 (62.01%), Postives = 218/279 (78.14%), Query Frame = 2 
Query:  623 RKGTRMISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSLAEFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAA-EYGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPRDESELAFVTNPKAQKFMEDLPEYPR-GLEEAFP 1453
            R GT       T F+VD  Y + KPVGHGAYGVVISA +T  + KVAIKK+  AF+D++DAKRI+RE++LL+  DH NII IVD+LPPPSLA F DVYI+S+LM+TDLHR+IYS Q LSD HV+YFLYQIL  +KYIHS++VLHRDLKPSN+LL++NCDLK+CDFGL+RGV  PDE+   ELTEYVVTRWYR+PEIML+  EY   IDIWS GCIFAE+L R+P+F G+ Y+  L++I   +G P +E EL FVT+ KA++FM+  P  P+  L++ FP
Sbjct:   23 RPGTHSFVVSGTTFQVDTKYKFIKPVGHGAYGVVISAQNTETDEKVAIKKVSKAFEDLIDAKRILREIKLLQHFDHENIITIVDLLPPPSLAHFEDVYIISDLMETDLHRIIYSRQPLSDDHVQYFLYQILRALKYIHSSNVLHRDLKPSNLLLNSNCDLKVCDFGLARGVE-PDEDNM-ELTEYVVTRWYRAPEIMLSTKEYTKAIDIWSTGCIFAELLGRKPMFPGDDYIHQLQIICDKLGTPSEE-ELHFVTSEKARRFMKGQPNKPKIPLDKLFP 298
[Close]
BLAST of mRNA_P-lacustris_contig99.16191.1 vs. uniprot
Match: A0A485LIZ0_9STRA (Mitogen-activated protein kinase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LIZ0_9STRA)

HSP 1 Score: 343 bits (880), Expect = 3.420e-108
Identity = 171/279 (61.29%), Postives = 217/279 (77.78%), Query Frame = 2 
Query:  623 RKGTRMISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSLAEFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAA-EYGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPRDESELAFVTNPKAQKFMEDLPEYPR-GLEEAFP 1453
            R GT       T F+VD  Y + KP+GHGAYGVVISA +T    KVAIKK+  AF+D++DAKRI+RE++LL+  DH NII IVD+LPPPS++ F DVYI+S+LM+TDLHR+IYS Q LSD H++YFLYQIL  +KYIHS+SVLHRDLKPSN+LL++NCDLK+CDFGL+RGV  PDE+   ELTEYVVTRWYR+PEIML+  EY   IDIWS GCIFAE+L R+P+F G+ Y+  L++I   +G P +E EL FVT+ KA++FM+  P  P+  LE+ FP
Sbjct:   25 RPGTHSFVVSGTTFQVDTKYKFIKPIGHGAYGVVISAQNTETGDKVAIKKVSKAFEDLIDAKRILREIKLLQHFDHENIITIVDLLPPPSVSHFEDVYIISDLMETDLHRIIYSRQPLSDDHIQYFLYQILRALKYIHSSSVLHRDLKPSNLLLNSNCDLKVCDFGLARGVE-PDEDNM-ELTEYVVTRWYRAPEIMLSTKEYTKAIDIWSTGCIFAELLGRKPMFPGDDYIHQLQIICDKLGTPSEE-ELHFVTSEKARRFMKSQPNKPKIPLEKLFP 300
[Close]
BLAST of mRNA_P-lacustris_contig99.16191.1 vs. uniprot
Match: W4H4T3_9STRA (Mitogen-activated protein kinase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4T3_9STRA)

HSP 1 Score: 341 bits (874), Expect = 9.770e-108
Identity = 171/279 (61.29%), Postives = 215/279 (77.06%), Query Frame = 2 
Query:  623 RKGTRMISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSLAEFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAA-EYGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPRDESELAFVTNPKAQKFMEDLPEYPR-GLEEAFP 1453
            R GT       T F+VD  Y + KP+GHGAYGVVISA +T    KVAIKK+  AF+D++DAKRI+RE++LL+  DH NII IVD+LPPPSLA F DVYI+S+LM+TDLHR+IYS Q LSD H++YFLYQIL  +KYIHS++VLHRDLKPSN+LL++NCDLK+CDFGL+RGV  PDE+   ELTEYVVTRWYR+PEIML+  EY   IDIWS GCIFAE+L R+P+F G+ Y+  L++I   +G P  E EL FVT+ KA++FM+  P  P+  L+  FP
Sbjct:   26 RLGTHSFVVSGTTFQVDSKYKFIKPIGHGAYGVVISAQNTETGDKVAIKKVSKAFEDLIDAKRILREIKLLQHFDHENIITIVDLLPPPSLALFEDVYIISDLMETDLHRIIYSRQPLSDDHIQYFLYQILRALKYIHSSNVLHRDLKPSNLLLNSNCDLKVCDFGLARGVE-PDEDNM-ELTEYVVTRWYRAPEIMLSTKEYTKAIDIWSTGCIFAELLGRKPMFPGDDYIHQLQIICDKLGTPT-EDELHFVTSEKARRFMKSQPNKPKIPLDRLFP 301
[Close]
BLAST of mRNA_P-lacustris_contig99.16191.1 vs. uniprot
Match: W4H5S3_9STRA (Mitogen-activated protein kinase n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5S3_9STRA)

HSP 1 Score: 341 bits (874), Expect = 3.570e-107
Identity = 171/279 (61.29%), Postives = 215/279 (77.06%), Query Frame = 2 
Query:  623 RKGTRMISAWDTFFEVDDYYTYKKPVGHGAYGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNIIKIVDILPPPSLAEFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAA-EYGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPRDESELAFVTNPKAQKFMEDLPEYPR-GLEEAFP 1453
            R GT       T F+VD  Y + KP+GHGAYGVVISA +T    KVAIKK+  AF+D++DAKRI+RE++LL+  DH NII IVD+LPPPSLA F DVYI+S+LM+TDLHR+IYS Q LSD H++YFLYQIL  +KYIHS++VLHRDLKPSN+LL++NCDLK+CDFGL+RGV  PDE+   ELTEYVVTRWYR+PEIML+  EY   IDIWS GCIFAE+L R+P+F G+ Y+  L++I   +G P  E EL FVT+ KA++FM+  P  P+  L+  FP
Sbjct:   26 RLGTHSFVVSGTTFQVDSKYKFIKPIGHGAYGVVISAQNTETGDKVAIKKVSKAFEDLIDAKRILREIKLLQHFDHENIITIVDLLPPPSLALFEDVYIISDLMETDLHRIIYSRQPLSDDHIQYFLYQILRALKYIHSSNVLHRDLKPSNLLLNSNCDLKVCDFGLARGVE-PDEDNM-ELTEYVVTRWYRAPEIMLSTKEYTKAIDIWSTGCIFAELLGRKPMFPGDDYIHQLQIICDKLGTPT-EDELHFVTSEKARRFMKSQPNKPKIPLDRLFP 301
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig99.16191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNS7_ECTSI2.740e-22588.86Mitogen-activated protein kinase (Fragment) n=2 Ta... [more]
A0A835Z2Y5_9STRA1.690e-13054.50Mitogen-activated protein kinase n=1 Tax=Tribonema... [more]
D8LNL4_ECTSI2.750e-13056.35Mitogen-activated protein kinase n=2 Tax=Ectocarpu... [more]
A0A6V1P443_HETAK4.360e-12954.86Mitogen-activated protein kinase n=1 Tax=Heterosig... [more]
A0A7S2CTH5_9STRA1.260e-10962.27Mitogen-activated protein kinase n=1 Tax=Florencie... [more]
W7U818_9STRA1.290e-10951.66Mitogen-activated protein kinase n=1 Tax=Nannochlo... [more]
A0A067CUZ6_SAPPC1.840e-10862.01Mitogen-activated protein kinase n=3 Tax=Saprolegn... [more]
A0A485LIZ0_9STRA3.420e-10861.29Mitogen-activated protein kinase n=2 Tax=Aphanomyc... [more]
W4H4T3_9STRA9.770e-10861.29Mitogen-activated protein kinase n=1 Tax=Aphanomyc... [more]
W4H5S3_9STRA3.570e-10761.29Mitogen-activated protein kinase n=9 Tax=Aphanomyc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig99contigP-lacustris_contig99:190364..201130 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score347.4
Seed ortholog evalue6.6e-93
Seed eggNOG ortholog112098.XP_008606125.1
KEGG koko:K04371
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00687
Hectar predicted targeting categoryother localisation
EggNOG free text desc.MAP kinase activity
EggNOG OGsKOG0660@1,KOG0660@2759
Ec32 ortholog descriptionmitogen-activated protein kinase putative serine/threonine protein kinase
Ec32 orthologEc-08_005990.1
EC2.7.11.24
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Exons9
Model size2119
Cds size915
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817421.5632784-UTR-P-lacustris_contig99:190363..1907111622817421.5632784-UTR-P-lacustris_contig99:190363..190711Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig99 190364..190711 +
1693495055.8062744-UTR-P-lacustris_contig99:190363..1907111693495055.8062744-UTR-P-lacustris_contig99:190363..190711Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig99 190364..190711 +
1622817421.574261-UTR-P-lacustris_contig99:194546..1947151622817421.574261-UTR-P-lacustris_contig99:194546..194715Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig99 194547..194715 +
1693495055.8180103-UTR-P-lacustris_contig99:194546..1947151693495055.8180103-UTR-P-lacustris_contig99:194546..194715Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig99 194547..194715 +
1622817421.5847673-UTR-P-lacustris_contig99:195648..1956931622817421.5847673-UTR-P-lacustris_contig99:195648..195693Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig99 195649..195693 +
1693495055.8375225-UTR-P-lacustris_contig99:195648..1956931693495055.8375225-UTR-P-lacustris_contig99:195648..195693Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig99 195649..195693 +
1622817421.6677878-UTR-P-lacustris_contig99:199998..2000951622817421.6677878-UTR-P-lacustris_contig99:199998..200095Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig99 199999..200095 +
1693495055.915107-UTR-P-lacustris_contig99:199998..2000951693495055.915107-UTR-P-lacustris_contig99:199998..200095Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig99 199999..200095 +
1622817421.6787174-UTR-P-lacustris_contig99:200585..2011301622817421.6787174-UTR-P-lacustris_contig99:200585..201130Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig99 200586..201130 +
1693495055.9266367-UTR-P-lacustris_contig99:200585..2011301693495055.9266367-UTR-P-lacustris_contig99:200585..201130Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig99 200586..201130 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817421.5959957-CDS-P-lacustris_contig99:195693..1957671622817421.5959957-CDS-P-lacustris_contig99:195693..195767Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 195694..195767 +
1693495055.8490653-CDS-P-lacustris_contig99:195693..1957671693495055.8490653-CDS-P-lacustris_contig99:195693..195767Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 195694..195767 +
1622817421.6092107-CDS-P-lacustris_contig99:196629..1967501622817421.6092107-CDS-P-lacustris_contig99:196629..196750Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 196630..196750 +
1693495055.860225-CDS-P-lacustris_contig99:196629..1967501693495055.860225-CDS-P-lacustris_contig99:196629..196750Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 196630..196750 +
1622817421.6198628-CDS-P-lacustris_contig99:197558..1977711622817421.6198628-CDS-P-lacustris_contig99:197558..197771Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 197559..197771 +
1693495055.8712704-CDS-P-lacustris_contig99:197558..1977711693495055.8712704-CDS-P-lacustris_contig99:197558..197771Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 197559..197771 +
1622817421.631507-CDS-P-lacustris_contig99:198458..1985781622817421.631507-CDS-P-lacustris_contig99:198458..198578Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 198459..198578 +
1693495055.882806-CDS-P-lacustris_contig99:198458..1985781693495055.882806-CDS-P-lacustris_contig99:198458..198578Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 198459..198578 +
1622817421.6438677-CDS-P-lacustris_contig99:199128..1993561622817421.6438677-CDS-P-lacustris_contig99:199128..199356Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 199129..199356 +
1693495055.8969028-CDS-P-lacustris_contig99:199128..1993561693495055.8969028-CDS-P-lacustris_contig99:199128..199356Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 199129..199356 +
1622817421.655055-CDS-P-lacustris_contig99:199839..1999981622817421.655055-CDS-P-lacustris_contig99:199839..199998Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 199840..199998 +
1693495055.906019-CDS-P-lacustris_contig99:199839..1999981693495055.906019-CDS-P-lacustris_contig99:199839..199998Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig99 199840..199998 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig99.16191.1prot_P-lacustris_contig99.16191.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig99 195694..199998 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig99.16191.1

>prot_P-lacustris_contig99.16191.1 ID=prot_P-lacustris_contig99.16191.1|Name=mRNA_P-lacustris_contig99.16191.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=305bp
MRAIADKVQQLKDALVVLPKRKGTRMISAWDTFFEVDDYYTYKKPVGHGA
YGVVISALDTRDNSKVAIKKIPSAFDDVVDAKRIVREVRLLRRLDHMNII
KIVDILPPPSLAEFNDVYIVSELMDTDLHRVIYSSQRLSDQHVKYFLYQI
LCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETA
ELTEYVVTRWYRSPEIMLAAEYGYPIDIWSVGCIFAEMLRREPLFRGETY
LQMLKLIAKFVGKPRDESELAFVTNPKAQKFMEDLPEYPRGLEEAFPVCR
GRRG*
back to top

mRNA from alignment at P-lacustris_contig99:190364..201130+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig99.16191.1 ID=mRNA_P-lacustris_contig99.16191.1|Name=mRNA_P-lacustris_contig99.16191.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10767bp|location=Sequence derived from alignment at P-lacustris_contig99:190364..201130+ (Pleurocladia lacustris SAG_25_93)
AGCGCTTGTGGCCTCTCGCCTCTAAAAGGCATCCTGGTACATCGCCTAAG
CGTTTGCGCTCTCGCGAGCGGCTTCCAACGCAAAAAAACACAGCGTTCGC
CCTCTCTCTTGTGTGTAGCAGAGAGCAGAGGCCAGAGTTGGTGCTGAGAA
GAGCTGGTGACTTGCGTGTGCGCTGTTTGTGCTGCTGTGTGCGTGTTCAG
CCTGTAAAAGTCGTTGCTGGCAGCAGACCTGAGAGTCTTTGGTTCCCCTG
CCGGACGCGCACGCTGGGTTTGGAAGGAGCTGCGCCACGGCGAGGGAGCA
AAAGGGGCGAGTAGCGTTCAGCTATGGAGGGGTTCTTGGAGAAGAAAGGT
GAGATGGCGCCCCCCTTTGTTTGGACAAAGAGAGTCGGGTGAGACAAAGA
CACGCACGCGGCCGGGAGTTTCGGTTCTTTCCTTATTCGCAACGTGTGTG
TGTGTGTGTGTGTGTGTGATAAGGATGCTGGCTCGCGTAGGAGATGTTAA
GCCGGCCTTGGTCGAAAAAACTATCGATATGGGGTATTTTTCAGCTCTTT
GCTCTCGGTCTCTCTCTGCTTGCTGCTTCACGCGGCACAAAAGGAGAGAA
GAGGTGATTCTGGACACCCAAGAGCAATGTGTGTCTCTCTCTACTCTCTC
ACAGCCTGTGTTGGGCCTTGGTGTTTCTTGACTTGCACACAGGCCGATTT
TCGGTCGATCTCTCCACTTATAAAAGGAACCGAGTTTCAACGCATGTCCC
CAAACCCTCGCCCGATTGTGTGTGTGTTGTGGTGTGTTGTAGAGAGAAGA
GGGAGCGAGAGAGGGTGGAATGAATCGCTGTTTTGCTGCCAGGTCAGGGT
GCGCCCTGACGTGGCTCGGCTCTATGGAATTCATGTATAGTCGAACCTCA
CATGGAGACCGGTCGGTTGGTCTCTTCTCTTTTTCCTCTCTCGTGTGCTG
CACCGAAATCCACATTGGATTATTTACTCGATCAACAAACACACACACAC
ACACACACACACACAGCGGCCCCAGCGGCTGGTAGGCTTATCTTTTTTTT
TTGCCACTTTGGTCCCGTTTGTACCCCCATCCTCGTCACCAGAGAGGTCT
CTCGTGTGTTTGCCAGTCTCTGTTTGTGTCCCTCTCTTCGCGTTGCCCGC
CGGGCCTGTTGTTGCCCCCTGCCTGCCGCGCGCTGCTTTCATATACGAGA
TTAGATTTATCATCGTTAGTGGAACTAGTCGATCGCTTGCGTGGTCCAGT
CTGTTCCGTTTGTTGTTTGAGTGGCAGGTGGTGTGGACATACTTTTTTTT
GTTCCAATCTCTTCTTTCTCTTTTCTGGCATTGATGTGTGTACCAAGGTG
CCGTCCTGCCATGTTGGTTGCCTCGGTTGCAGCGGTATATATGTAGAGGG
GGTGCTATCTATGTTTAGCCCTCTCTCTTGATTTTCCTGAGGTAATTGCG
GCAATCATGCGCGTAGCGCGTAGAACTGTAAGACCACTTTCTGCTATGCG
TGTCATGCTCATATGCCGCCAGGTTATTTTCTATCATAGCTCTGAGGGAG
AATACAAAGGAGCCTCTTGCTGTCATGTTCATCATGCTTCTCGTGAACAA
CTGGGAGCATGTGAAGCAAGTGCAGGACTCTTACGGCTATGCTTGCGTGT
GTGTCTTTTACGCCACTCCACACCCCACACACATGTAGAGAAAACAAATG
TGCTACAAAAATGTACGGACAAGTAAATACAAAGCACATAACGCAAGTAA
AATAATTTTCTGAAATTAAGAACACAAGCGCCAGTGCCGCACCCTCGGTT
AATTTTTTTAATTTGTGTCCAACTTTCTTGTACTTGTAAGAGCAACCAGT
ATCATTCTGCCTCTCTGCAGAGTATTTACAACGCGTCACATGCAACGATT
GTTTCCATTGATACCGGGAGCGTTTCCTGGGGTGTCGACAATCGTTCTCG
AACTCTTCCAGGTCATAGAGACGACTCGGCGGGGCTTCGGCGCGCTTAAG
TCAGTGGCATCGATTTTTTATTCTTGCGCACGTATCAAAGAGGATCCTTC
ATTGATTCAGCCAATGTGATATTTATACTCCGAGTATCATACTTATCTTT
ATTTCTTTTTCTCGACCGTTGTCCCCCCCTCCGCGGCGGCCAGGGCGGCT
ACGTGTAGCTGAGCTCCGTACCGTTTCTAGCTTAGGGTAACGGAAGAAGC
TAGATTACTAAAGTGCGGAGTACTGAGTATTCATTAATGCAACCGACGTT
AGCCCAAGCGCAAAAAAGATCAGTAACTCTCATGCCGACGAACACAGCAA
AAGGTCCGTGCATGATGCCCGTTGGTTGTCAGGAAGGGTTTATCTCAATC
GCTGTTTTCTGGCACCCGACCTGTAGATAGCAACGCATATGATCTCACGT
AGGGAGCCCCTTTTCCCTTGCCCACATCCTTCTGTGGTACAGTAGCCCCT
CACTTGCTTTGCCCGTGATTGTCAGCCCTACAACTAGTTCCGACTCGTCT
ATTTACTACTCAGTATTTACTACTACTTGGAGTATAACAACACTGCAGAA
CAGGTTCAGGTTCGGACTGACTCGTTTTTCTGTGGAGGGCGTCCCATCCC
ATCATCCCATTTCCCTCCACCTATCAAAGGAAAAGGTGTCGCTTTTTGTC
TGTCGCTAAATTAAAACTCTTGGACTATATCACTCAGCCGGATTTTTTAT
CGAAGCGCCGCCAGGTCTCGGACCTTTCAGAGTGTTAGCTACGTCGAACG
TTGGACGTTGCGCTCTGGAACTCGAAAAAAGTGCAGTTGCAGAAATAGTA
GAAACGACGGCAGTTAATGTCTATCTCGCCGTTTGCTTGCGTAGTCAGCC
ACCGTTTCTACCCGCCATCGGTAGAAAGCAAGGATGATAAGGGTGTCATT
CAAGTACACTAACTGTATTTGTTGAGGTTCATGGTCGAGGTAGCGTGCCC
CCTCTCTTCTTGTTCTTGTCTTAATCCCTGGACTATCTCGAGTCTGTTTT
TGCCCTGACGCCGGCATCACTGCGTCAATGTCACTTCTCAATGTCTCTGT
CTGGGTCTACTCACCCGTCGAATCATCGACTTGCAGCTGGAATCTCCCGC
ATTTTGTTTGCTGAGTTGTCGTTATTCTCTGGACTATCTATCGCAAGCGT
GCCGGCCGTGAGACAAAATTGTGCCCATCCGCACGAGGTACTCCACAAGC
ATGGTGTGTCCACATATTGCGTGGCCGACGATTTTTGCAGTACGAGTACG
TTGGCTTTGGCTTGGCTTGGCTTAGCGTCTATCTCTCACAAGCAACAAGC
AAGGTTGACCACTTTCACCCCACTGCCACTCTACAATGCGAACGGATAAT
ATGTCTGCATGAGGCGTATATTCACGCTGCTCTCCTGAGATTTTCGTACT
TGATCATGGCAGGCTTTCTTTGACTTGGCTATTGGTAAGCGGACAGGTTC
GTTCGAAGCAAAACCTAGCCTTTCCTGGAATTGTATGATTGATAATGTTT
GGTACATAAATATGCACACATACACCTCAATTCGGAACTACATCAAATGC
TCACGATGGGGGCGTCGTGTTGTTTTCTATCTACGCCAACTGCTGGCCTG
GGGAACGTGATCGTGGTTGAAAAGGGTCCTCGTGTGTCCGGGGCGCGCGG
GGGGCTGTATGCTACGCGCATTCTGAAACCGCCTTTCCTTTCGCAGCACG
CTTCTTTTGTCCTCGTCACCTCTGGTCCCGGGATTCCAAGCGTGTTCGCT
TGTTTGCGTGTCATTTACTCCGTATCATTCATGCGCTCGGCGTTTGAGAG
GGCACCCCGTATGCGCGTTTACTCACGTCCACACCAAGGTGTGAATATCT
GATCCTTTGTACTCGGATTTGTTTGCCGTGCGGATCGTGCCTCATGGCGT
TAGGGCCACCCCTTCGTGAGTGTTGCGTGTACCACCAACATTGCGCTCCA
AACAGGATATTGCGTTTAAGCCACGTTTGAGTTTGACCGGAGAGGGTAAA
ACCACCTGCAGGGGACTTCGCAGATGGCGGTCTTCCTTTTATGTTTTGTG
TTTCCTCTTCAAAGTTGAAGTTATCGAAGAACCACCGCTCGAGCCAACAC
TCATGTCACGTTGACTAATACGAATCTTCATGCACACGTACTTGCTGTGC
GCCTGATTAGCCCCTCCCCGTCACCTGTGACAGGCGTATCGGGGTGGACG
GAGAGATGGTTCGTTCTAGAGGGCAAGCGGGTGATGTACTACAACCAAAA
GGGTGATAGGCATCCAAGGGGGACGCTTGAGCTCAACGCGGGAGCAGGCT
CAAAAAGATCGCAACCAAGGAACACGCCTTCCACGTCGTTTCTGACAAAC
AGGTTTGTTCGTGGTTTAGTGTTTCCTGGTTGGCGTTAGCGTTGTCGGCT
GTGACATGGCTTAGAGTGGGGCTTGCTGTCTCGTTGAAGTCAAGCTGACG
AGGCCTACCTTCCTCACGCCGAAAGTTGCTACTACCTCAGTCAGCGTGTA
GCAGGGCAGATTGGTAGAATGTCCCATCAATGTGTTAGCTTTGTTTTGCG
AGTTGCACAAGGTGAGTCGAAAGATCTATCTCCACATAGGCTACAATGTA
AGGCCAGACCCTTGGCACCGTGGGTTGGCTTTCCAGTGGAAGTGGTAGGA
ATGAATGAGTGAATGTGCTATTCTCGGTCGACAAGACTGGACAAGGTAAA
TTCAAGTCAAACACCGCTTGTGAGCGAAATGAAATAGTGAAGGCTGGTCT
TAGCATAACAAAGTAGGGCGTTGCCGGTATGAGTTGCTGCTGTTGCTCTG
AATAGAGAGCTGCGAAGTTTTCGAGGCGATTGTTCCCTCAGGAATCGAGA
ATCGCCCTCACAAATATCGAAGACTCATGATCGCATTTTCGATTTACGTG
CGTCGAGGCAAGCATGCCGTCCGTGGTCCGTTCAAAAAAGGTGTACATTG
TTGTAAGGACGAACTATGCATAGCTTGGAAGACCGCATCCACGACCATGT
TTCCGGCCCGCATCTCCCTGGCTGCCTTGCTAATTTCCCCATTGCGCAAT
CACTGTGACACGAATCGATGAAAACTCCTTCTGCTTCCCTGATCATCGAT
TTCTGTCGACGTGTTGCTATATGTCACTGCTGCCGCCACCCGTCCCCTCC
CCTGTCATTAGGCCCGTATTATGTAGCTTGTCGTGGTAGATGACGCATCT
ATCGTGCGGACACTATTATTTTTGTGAAAAGGACTGACCTCTTCGTTGTT
TGCCTTGCACACCGCATTAATTGTTTTTTCAACAGGCGTTGACAGTAAAC
GCACTGAGCAGCAGTGACCGCGAGCAGTGGATGAGGGCCATCGCTGACAA
GGTTCAGCAGCTGAAAGACGCCTTGGTGGTTCTGCCAAAGCGAAAGGGAA
CGAGGTGAACGTGATTTCATGTCAACAGACATCAACAGCAACAACTCAAG
AGCTAAAAGAACGTTCTAGAGAACGTTACGTTGTTCTCGTGCCTTTTGTT
GTGTTGAGATGACACGTCTTCCTTGCTCCCGTCAGCGATGGAGGGTAGGG
TAGGGTAGGGTAGCAATTGGATAGACGGATGTCTTGCCATTTTTTTCGCG
TGGATTGCACCACAGGCGCTCTGCTAGCTCTCCGGTGAACTGTCAAAAAA
AAAAAAGTTCAAATGTTCTTGAAAGCTGTACGTAGGTGTTTGGGCAGGCG
CGCTCTACTTCCTGAAAGACGCCACAAGTTATCTTCGAGAGAAATTTCGA
AATTTCAGAGATTTTTCCTTGCTCTTTCTTTTGTCTCTGTCGATCGTTCA
GATCGGAACGTGGAAGCACCGCACCGACAGAGGTCAAACCTACTATTTTC
CAGGATCAGTATATTTTGTAGAAACAAAGGACAGTACGTAGAGGATGATA
TCATACGAAGTGAAGAGACCTTCATATGGGTGGACACGAATTTTTTCTTG
CTCTGGTGCAAGATTCCTATCGAGCCATCACCATCACCATCACCACACCA
CCGACTTGTCCCTCACGGTAGATTGACATCCTGTCCACTGTCCACACAAT
TTGACATCCTGTCCACTGTCCACACAATACATAAGAAGCTCGTCATTGTT
ATGGCATGCATAGTGGAATGATTAATGATTTGATTTGACATGTGACTCTC
TTTCTTTGCGTTCGTTAGCCTCATCTCATCTCATCCGTTCTAGCTCAGTT
TTGGTGTTGATTTTCTTGCAGCCTTTTGTTGACTGTGACTGTAACTGTGG
GCATGTGGTCGTCTAGGATGATCTCTGCATGGGACACATTCTTTGAAGTG
GATGACTACTACACGTACAAGAAGCCGGTGGGGCACGGGGCATACGGTGT
GGTGATTTCCGCCCTGGACACGAGGGACAACAGCAAGGTAGGGGCGACGT
GCGACGTGACGGGTGCGGGAGTTGCAGCAGGCGCAGGAGGAGGAGCGTTG
TTTGTTTGTCGTTCCCGCGAGGGGTGCATGAGAAACGAAGTTAGGGTTTT
ACGAGTTCGTAAGACGGAAGGATTGGTGTTGGTGTAATGGTGTCGGCGTT
TTTCTTGTACTCTTTTTTCCTAGGCCCGTCAGCACATGTATGTCGCAAGC
TCTTTGTGGAAGGTAAATGACGTCGCAATTTGCTTTGTTTTTCCCATGGC
CGAAACAAGCGTCCTGTTGTTTTGGCGCTATTGGTATTGGTATTGGTACT
AGCCTCGTTTGTCACGGTTGTCACGGTTGTGGGGTCAGGTGATACCACCG
ATACCACCCTGGCAGATAGGCTTTCGTTGTGCGGCTGCAACCGCAGCCCG
TCCTATACGGCGCATGCCATGTTCGGTTTGTTCATGCCATGTTTTCTGAC
GTTGTCGCCATGTCCTGTTTAATGTACATGTCCTGTTCAACGTACATGAT
ATGATGCCCGTGGCATTTTTGGGGCGCCACTAAACGTGGGTGCTCGAGTC
GCGGGTCGCATCCTAGGCCCCAACATTGTCCCGACTTTCGCAGAAGCTGT
CTGCTCAACTCTAGAATTCTTGTCGAACGGATGGGGATGAGGCTGGCTCC
GAGTGTGCGGGCCCGTTGCGCGGGTCTGCTTTAGTGCCCACGATGATTGG
TAGGACGGCATGTGACACGCACACAACAACAATAAACGTGCTTCCTGGAA
AACGGAATGGAAGGCCAACCGACTCTGTGTCTCTTGTCTCTACAGGTGGC
AATCAAGAAAATTCCATCAGCGTTCGACGACGTGGTAGACGCTAAGCGCA
TCGTGAGGGAGGTGCGCCTCCTGCGGCGCTTGGACCACATGAACATCATC
AAGATCGTCGACATCCTGCCCCCGCCCTCCTTGGCCGAATTCAACGATGT
CTACATCGTGTCCGAGCTCATGGACACCGATTTGCACCGCGTCATTTACT
CCAGCCAGGTGAGTCGCGAGTCGCGAAGAATGCAAAGCAGATTTGTAGGG
ACATAATTTCTCGTGCGTGGCACGGATCAGTGCCAATACTTGTAGAGTTG
TAGAGAGGCAGGCATCAAGAGAAGTCGAAACGGCGCCATGGTTACAACCA
CTGGGAGGACGATTACCGTTACGACCAACATTAGAAAGGCGGGGGGAATC
CTGCCGCTGCTGCTGTTTCAACGCCTCTTCGGTCTGAGCCTTGAACCTTA
CCTTACGCGTTGCTCGTAGCCCTTCTTTTCTCCCGGAATATTTTTTGGAG
CACAGCTCGGGGACGCCGGTGCGGATGGCCTCGCTTGAGCATACGCAGCC
GACAAAAGTGTGCTGCCTGCTGCGATGTATGCGCCTTCCGAGCCGACCGG
TTGACGTGGAGCGTTCGGAAAGTTATCTCGATGAGAGCAGGCGTTGACGT
TGACGTTGACGTTGACGTTCTCTCCCTGACACGAGAACGAGATCGCCGGG
GGCAGGATTGTTGATTCGAGACGGCAATGTTTCGTGGTGGGCCTGCGCTC
ACCCGCCCCCGTGCGTGTCCCTTTGGCACGCTCTCATGTCATGTCATGCG
TGTCATGCGTGTGTTGTCCCTGTGCGCTTGCCCCCCCGCCCTCGTTTCAA
TTGAATTTTTGTCGTCTGACGTCGTCTGACCTCTTTGCTTCGCAGAGGCT
AAGCGACCAGCACGTGAAGTATTTCCTGTACCAGATCTTGTGCGGGGTAA
AATATATCCACTCGGCATCGGTATTGCACCGGGACTTGAAGCCCTCCAAC
ATCTTGCTCAGCACGGTAAGTCGCTCGGGGGTTGCTCCTTTGGTCCACTT
CCCTCCCCCCCCGCTGTTATCGAGGCCCCGTTGGTTTTGTTTTCTGCTAA
CGGGATTTTATGGTTTCATAGCACAGGCGTGTATGCGTGTAGGGCTAAAA
GGCGCGATCGTCGTGCTTCCCTCTTTTGTTCCTCGCAGACGATGCCTCTT
TCAAACCCAGAAGTTTGACTTGGCGAGTCAGCCACTCAACTTTCAACCTT
GTTTTTCCATCCCCAGTGCGACAACGCTTACCCGGTCCTCTTTGGGCGGC
TAGATATTGCACACTACACCGCACACGCATCTTGCCATCGCGCAGCAGCG
CAAGACCATACGACAACACAGGGAGCCCTCCGTCGCCTTTCATCGTTGTT
TCCCTCACGCAAGGAGTTCCAGCACAACTGCAGCTGTGGGCTAGGCCGTC
AACGCGTGCTTTGCTACATCCTTTCCCGCCAAACCTTGCACCTATTCCGC
CAAAAGCGGTTCGTTCACAATACCGTAAATCCACTTACCCCTCGCCCGTC
CACCCGCATCCACAGAACTGCGATCTGAAGCTGTGCGACTTTGGGCTTTC
AAGGGGGGTCAGTTCGCCGGACGAGGAGGAGACCGCGGAACTCACGGAGT
ACGTCGTGACTCGGTGGTACCGATCTCCGGAGATCATGCTGGCGGCGGAG
TACGGGTATCCCATTGACATCTGGAGCGTCGGCTGTATCTTCGCCGAGAT
GCTTCGCCGGGAGCCTTTGTTCCGGGGAGAGACGTACCTGCAGGTGAGAG
AGGGTAGGGTCGCGGCAGATGTGAGCGTGGACGGTGGCGGCAGAAGTGAG
CGTGGGATGATGCGGATGGATCATCGAAGGCGTGCTGCTTTTTTTTTTTT
TGGCTTTGACATGTTCCGCTCGGGGGTAGGGGCCCGATTTTATCTGGAAA
CGAATGATCCGACATCCACGAGGTTTTGGCTTCCCGCCTGCCGATGTACC
TTTTGAAAGACGAGGGACATATCGTCATGGTGCGATTTTGACCGGTGTTT
GCCTCAAGCTGTGAGGAAGCGGCAACCTTTTTCTCGCACCGTCTTTCCCC
TCTTCAAGACGGGGTACGGCGGCAGTGCGAGGGTTCAGCTGGTCGGTCGT
GCCTTGGGCACGGTGGGGCGACCGAGCATGTTCGAAGACACTCCGATGAC
CGCCGAAAGCTTGTCCTGAAATTTGCGTGCCCCTCTCGGCCTTCCTTCCT
GCATGCATCAACTATCCGCGAAACAGATGCTCAAGCTCATCGCCAAGTTC
GTGGGCAAGCCAAGGGATGAGTCGGAGCTGGCATTCGTCACCAACCCCAA
GGCGCAAAAGTTCATGGAGGACCTCCCAGAGTACCCCCGCGGACTTGAGG
AGGCGTTTCCCGTCTGCAGGGGCAGACGCGGTTGATCTGCTGGCGCGTAT
GTTGGTAATGCGGCCCGATCGACGGCTCTCCGTGGACGAGGCGCTAAGGC
ACCCTTACCTGCGCAGTCTTCGTGACAAAAAGGTGACTATTTAGTTTTCT
TCCAGAGGCGTCGAGAGTGTGGAGTGCTGTAATGTTGTCTTCGTGAAGGG
GTCGACTTGCATGACGCTGTCGTAGACTAGCTTGCTGATTGTGTAGATGG
ATTTTGGCTTATTCGGTTCGAGGGTTCTCGAGGGTTGTTTCGGTGGGGCG
AGGGGCTACCTTCCCTCATGAGCAAACTTACCCGCGTTCTTGTCCTCCCG
AGCACCATTCACGACCCTCTGTGTTGTGCTTGTTTCCCGAACCACAGCTC
CTCAACGCTCTTTTCTTATTTGTGGCCCCACCAGGGAGCGAGCGCGCCCC
GCGTCAACTACCGAAGGGTATGCGAGGGTAGAAGCCGGCGCACCTGCTGT
GGTTTATTGGCACCAAGTGAACATTATCCGGCCTTCTATCCACTAACGTA
ACGCCTCCCTCCGCCCTCCGCGCCCCGCCCGCGGGTGACCCACTGTGCAT
CATACATGAATTCCACGCGCAGGCGGAGACAACGGCGCTCGAGCCGGTAG
ATTTCGCGGACGTCGAGCTCGCGCCCCTGAACAAAAGCAACCTGCGCCGT
CTCATGCACGAAGACGTGCTGGCCTACCGCCCGGAGCTGCGCAGCCCCGC
CGCGGGCTCGAGCCTCCCCGAGCCGGCCTCGCGCACCGGCGGCCGCGAGG
CCGCTCGCGACGGCAGCAGCAGGGGGTCGTCGTCCTTGGCGGCGGCGGCG
GCGGCGGCGCAGCCGCCGCCACCCCCCAACGCGAGCGGGGGATCTAACGG
CGCAGTCGTCGGGGAGTCGTCGCATGTGCCGAACCGGGTGGCTAACGGTG
GAGGTGGGGGTCCGCGAATACGCACGCGGTGCCTGGAGGACAGCGGGAGC
GGTCTGCCAGGTCGGACCGAGAGGGAAGGAGCAGCGGCGTGTTGGGATCC
TCAGGGAGATCATCTGCGGCGGCGGGTTCGTCGTCGTCGTCGTCCGGGAG
AACCGACGCGAGAACAGCGCACGCGGCAAGAGCGCGCCCGGGGGTGCGGT
AGGGCGGCATCCGTTCC
back to top

Coding sequence (CDS) from alignment at P-lacustris_contig99:190364..201130+

>mRNA_P-lacustris_contig99.16191.1 ID=mRNA_P-lacustris_contig99.16191.1|Name=mRNA_P-lacustris_contig99.16191.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1830bp|location=Sequence derived from alignment at P-lacustris_contig99:190364..201130+ (Pleurocladia lacustris SAG_25_93)
ATGAGGGCCATCGCTGACAAGGTTCAGCAGCTGAAAGACGCCTTGGTGGT
TCTGCCAAAGCGAAAGGGAACGAGATGAGGGCCATCGCTGACAAGGTTCA
GCAGCTGAAAGACGCCTTGGTGGTTCTGCCAAAGCGAAAGGGAACGAGGA
TGATCTCTGCATGGGACACATTCTTTGAAGTGGATGACTACTACACGTAC
AAGAAGCCGGTGGGGCACGGGGCATACGGTGTGGTGATTTCCGCCCTGGA
CACGAGGGACAACAGCAAGGATGATCTCTGCATGGGACACATTCTTTGAA
GTGGATGACTACTACACGTACAAGAAGCCGGTGGGGCACGGGGCATACGG
TGTGGTGATTTCCGCCCTGGACACGAGGGACAACAGCAAGGTGGCAATCA
AGAAAATTCCATCAGCGTTCGACGACGTGGTAGACGCTAAGCGCATCGTG
AGGGAGGTGCGCCTCCTGCGGCGCTTGGACCACATGAACATCATCAAGAT
CGTCGACATCCTGCCCCCGCCCTCCTTGGCCGAATTCAACGATGTCTACA
TCGTGTCCGAGCTCATGGACACCGATTTGCACCGCGTCATTTACTCCAGC
CAGGTGGCAATCAAGAAAATTCCATCAGCGTTCGACGACGTGGTAGACGC
TAAGCGCATCGTGAGGGAGGTGCGCCTCCTGCGGCGCTTGGACCACATGA
ACATCATCAAGATCGTCGACATCCTGCCCCCGCCCTCCTTGGCCGAATTC
AACGATGTCTACATCGTGTCCGAGCTCATGGACACCGATTTGCACCGCGT
CATTTACTCCAGCCAGAGGCTAAGCGACCAGCACGTGAAGTATTTCCTGT
ACCAGATCTTGTGCGGGGTAAAATATATCCACTCGGCATCGGTATTGCAC
CGGGACTTGAAGCCCTCCAACATCTTGCTCAGCACGAGGCTAAGCGACCA
GCACGTGAAGTATTTCCTGTACCAGATCTTGTGCGGGGTAAAATATATCC
ACTCGGCATCGGTATTGCACCGGGACTTGAAGCCCTCCAACATCTTGCTC
AGCACGAACTGCGATCTGAAGCTGTGCGACTTTGGGCTTTCAAGGGGGGT
CAGTTCGCCGGACGAGGAGGAGACCGCGGAACTCACGGAGTACGTCGTGA
CTCGGTGGTACCGATCTCCGGAGATCATGCTGGCGGCGGAGTACGGGTAT
CCCATTGACATCTGGAGCGTCGGCTGTATCTTCGCCGAGATGCTTCGCCG
GGAGCCTTTGTTCCGGGGAGAGACGTACCTGCAGAACTGCGATCTGAAGC
TGTGCGACTTTGGGCTTTCAAGGGGGGTCAGTTCGCCGGACGAGGAGGAG
ACCGCGGAACTCACGGAGTACGTCGTGACTCGGTGGTACCGATCTCCGGA
GATCATGCTGGCGGCGGAGTACGGGTATCCCATTGACATCTGGAGCGTCG
GCTGTATCTTCGCCGAGATGCTTCGCCGGGAGCCTTTGTTCCGGGGAGAG
ACGTACCTGCAGATGCTCAAGCTCATCGCCAAGTTCGTGGGCAAGCCAAG
GGATGAGTCGGAGCTGGCATTCGTCACCAACCCCAAGGCGCAAAAGTTCA
TGGAGGACCTCCCAGAGTACCCCCGCGGACTTGAGGAGGCGTTTCCCGTC
TGCAGGGGCAGACGCGGTTGAATGCTCAAGCTCATCGCCAAGTTCGTGGG
CAAGCCAAGGGATGAGTCGGAGCTGGCATTCGTCACCAACCCCAAGGCGC
AAAAGTTCATGGAGGACCTCCCAGAGTACCCCCGCGGACTTGAGGAGGCG
TTTCCCGTCTGCAGGGGCAGACGCGGTTGA
back to top