mRNA_P-lacustris_contig99.16186.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig99.16186.1 vs. uniprot
Match: D8LNS0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS0_ECTSI) HSP 1 Score: 509 bits (1310), Expect = 4.810e-170 Identity = 305/478 (63.81%), Postives = 356/478 (74.48%), Query Frame = 3
Query: 147 MSDTDNESNSAAVMPKLGPRSKI-IIPNAFKNASTNGNGRSVGPASKEEAIHANGAGDAGQVPAEAPAKAPQAQVVAPTATEPTKLSLNPISPGLSSVKLPLGPSTKKEAESAEAXXXXAEKM-VEAKVGDLVEGVVGMGLGVIGRGQVRGIREEDGILEVWAMGWEMANEQRPRFFVRKDAVKVVPTTYYKMPVLERLQIAAWLKEEGARLFKAGDYEKAAEKYMKTIGVLKTCDFKTNSYNARALELMIPCHNNAATCYIKRKQYGDARVLSENVDSLCGALERIKSGKVMKALSERGVGETTILGQWWCKGLFLGGKACLYQGEHEEAVRCLKKGSKASKSACRILSYCGDLLAKPASLAKLRTEINTELEKATKRLANQTKKAQRMWTKAFDKNSTDVASEQEEKVPSAA--RALPSASIPIQSVAMAGTRNGGAAKSVLERLEELSKAVTSVSAIPESGKPVAKKDELRQGEG 1568
MSD + S+SAA P+LGP+SKI I+P+A ++ NGNG SV K + ANG ++ APA + VVA T+ +KL+ NPISPGLSSVKLPLGPS K+EA++A E+ VEAKVGDLVE +G RGQVRGIR+EDG+LEVWA+GWEMA EQR RFFV ++ VKVVPT YYKM LERLQ+AAWLKEEGA+LFKAGD+EKAA KYMK+IGVLKT +F TN+ NARA++LMIPCHNNAATCYIKRK YGDAR+L+ENVD+LC ALER + GKVMK L ERGVGETTILGQWWCKGLFLGGKACLYQ E+EEAV LKKGS+ LAKPA+LAKLR EIN ELEKATKRLA+QTKKAQ+MW+KAF KNSTDVA EQE VP+AA RALPS + + AM G RNGG KSV+ERLE L+K + V AIPE K K+DE + EG
Sbjct: 1 MSDNVSSSSSAAGAPELGPQSKIAIVPDASAGSNPNGNGHSV--VEKAHSSPANGV----EISPPAPAPPAEVAVVAANKTDSSKLAFNPISPGLSSVKLPLGPSPKEEAKTASPEKKEEEEPPVEAKVGDLVELFMG-------RGQVRGIRQEDGMLEVWAVGWEMAGEQRARFFVPRETVKVVPTVYYKMNALERLQMAAWLKEEGAKLFKAGDFEKAATKYMKSIGVLKTGEFTTNAQNARAVQLMIPCHNNAATCYIKRKNYGDARLLTENVDTLCSALERNRDGKVMKELKERGVGETTILGQWWCKGLFLGGKACLYQSENEEAVNYLKKGSR---------------LAKPAALAKLRAEINNELEKATKRLASQTKKAQKMWSKAFSKNSTDVAPEQE-GVPAAAEKRALPS----MPTRAMDG-RNGGPEKSVVERLEALAK-MGVVPAIPEPSKTTPKQDEEQGEEG 443
BLAST of mRNA_P-lacustris_contig99.16186.1 vs. uniprot
Match: A0A7S2KRW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KRW4_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 5.630e-11 Identity = 54/211 (25.59%), Postives = 98/211 (46.45%), Query Frame = 3
Query: 570 IGRGQVRGIREE----DGILEVWAMGWEMANEQRPRFFVRKDAVKV---VPTTY--------YKMPVLERLQIAAWLKEEGARLFKAGDYEKAAEKYMKTIGVLKTCDFKTNSYN---ARALELMIPCHNNAATCYIKRKQYGDARVLSENVDSLCGALERIKSGKVMKALSERGVGETTILGQWWCKGLFLGGKACLYQGEHEEAVRCLK 1148
+GRG V +R D I V W +A R R + + TY ++M + E+++ A K+E F G Y++A + + + ++ +S N A +E+MI C NNAA+CY+K+K++ DA+ + N + ALE + K+ L + G+ + + G+W K + + +A + ++ A+ LK
Sbjct: 80 VGRGVVEDVRRNSNSGDDIAVVLLNTWRLAGRSRVRIYTPLSSFSKGNHADVTYHVVRKKRLFEMDIFEKIEYAKAKKQEAIPHFVQGRYDEALSLFSEAVHAVRMQQHSPDSSNEMRADLVEIMITCSNNAASCYVKKKEWKDAQQQARNALLIIDALEGKRGMKIHTILRQGGLTDLKMFGEWRIKSMLIIARAEAEEQDYVMAIPRLK 290
BLAST of mRNA_P-lacustris_contig99.16186.1 vs. uniprot
Match: A0A6I9T284_SESIN (Peptidylprolyl isomerase n=6 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9T284_SESIN) HSP 1 Score: 57.4 bits (137), Expect = 9.690e-5 Identity = 37/109 (33.94%), Postives = 55/109 (50.46%), Query Frame = 3
Query: 711 YKMPVLERLQIAAWLKEEGARLFKAGDYEKAAEKYMKTIGVLKTCDFKTNSYNARALELMIPCHNNAATCYIKRKQYGDARVLSENVDSLCGALERIKSGKVMKALSER 1037
++M ER++ AAW KEEG +LFK G Y++AA+KY K + + T L + C N A C +K +G+A +LC + ++S V KAL R
Sbjct: 392 WEMSNAERIEAAAWKKEEGNQLFKNGKYQRAAKKYDKAADYVGEDGYLTGDDEKVVKSLRVSCWLNGAACSLKLNNFGEAI-------NLCSKILDVESCNV-KALYRR 492 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig99.16186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig99.16186.1 >prot_P-lacustris_contig99.16186.1 ID=prot_P-lacustris_contig99.16186.1|Name=mRNA_P-lacustris_contig99.16186.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=534bp MSDTDNESNSAAVMPKLGPRSKIIIPNAFKNASTNGNGRSVGPASKEEAIback to top mRNA from alignment at P-lacustris_contig99:134541..147429+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig99.16186.1 ID=mRNA_P-lacustris_contig99.16186.1|Name=mRNA_P-lacustris_contig99.16186.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=12889bp|location=Sequence derived from alignment at P-lacustris_contig99:134541..147429+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig99:134541..147429+ >mRNA_P-lacustris_contig99.16186.1 ID=mRNA_P-lacustris_contig99.16186.1|Name=mRNA_P-lacustris_contig99.16186.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3204bp|location=Sequence derived from alignment at P-lacustris_contig99:134541..147429+ (Pleurocladia lacustris SAG_25_93)back to top |