mRNA_P-lacustris_contig987.16164.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig987.16164.1 vs. uniprot
Match: D8LHQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ4_ECTSI) HSP 1 Score: 132 bits (331), Expect = 4.660e-31 Identity = 92/152 (60.53%), Postives = 105/152 (69.08%), Query Frame = 1
Query: 637 AFVANPSNYGSTIPGLRKALPPPAASITAVTSRSHQATDHCRR---AGQACEAPGGLRNAGGGGTRSIEGEDRTQPTQSQPQVSERKHASTVRGLATGAAVVALAALGGFPDLAAAEAPAWVGPAKLVLDPILLYFEVAFVARIILSWYPKV 1083
AFVA PS+ GS + LR A PPA T +TSRS A R A QA A GG+ + GG T S E+RT+ ++P++ ASTV GLATGAAVVALAALGGFP LAAAEAPAWVGP KLVLDP LLYFE AFVARI+LSWYPK+
Sbjct: 25 AFVAPPSSSGSALTALRTA--PPA---TTLTSRSRPAAGGYGREKGARQAWSALGGVPD--GGATASTGEEERTRSA-AEPKLQPAA-ASTVSGLATGAAVVALAALGGFPGLAAAEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKL 167
BLAST of mRNA_P-lacustris_contig987.16164.1 vs. uniprot
Match: A0A6H5L5E9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E9_9PHAE) HSP 1 Score: 127 bits (319), Expect = 1.520e-29 Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 2
Query: 1526 MDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEVLLGQQGILNLMSNK 1714
+DLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHE+LLGQQGILNLMSNK
Sbjct: 159 LDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 221
BLAST of mRNA_P-lacustris_contig987.16164.1 vs. uniprot
Match: A0A836CA21_9STRA (YGGT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA21_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.070e-22 Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 2
Query: 1529 DLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEVLLGQQGILNLMSNK 1714
DLN APQNLVAWPTEPIL+PTRA++PPAFGVDISPIVWVMI S V E+L GQQGI N++S +
Sbjct: 128 DLNKAPQNLVAWPTEPILKPTRAVVPPAFGVDISPIVWVMILSFVREILFGQQGIFNMLSQQ 189
BLAST of mRNA_P-lacustris_contig987.16164.1 vs. uniprot
Match: UPI0016891C49 (YggT family protein n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI0016891C49) HSP 1 Score: 92.0 bits (227), Expect = 1.030e-18 Identity = 42/63 (66.67%), Postives = 52/63 (82.54%), Query Frame = 2
Query: 1526 MDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEVLLGQQGILNLMSNK 1714
+DLN P NL+AWPTEP L PTR +IPP GVDISPIVWV ICSL+ E+LLGQQG+L +M+++
Sbjct: 34 VDLNRFPFNLIAWPTEPFLIPTRKLIPPLGGVDISPIVWVGICSLIREILLGQQGLLTMMASR 96
BLAST of mRNA_P-lacustris_contig987.16164.1 vs. uniprot
Match: A0A651EN12_9CYAN (YggT family protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A651EN12_9CYAN) HSP 1 Score: 91.3 bits (225), Expect = 2.030e-18 Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = 2
Query: 1529 DLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEVLLGQQGILNLMSN 1711
DLNS P N+VAWPTEP LRPTR +IPP GVD+SPI+WV I SL+ E+LLGQQG++ + SN
Sbjct: 35 DLNSLPLNIVAWPTEPFLRPTRKLIPPLGGVDVSPIIWVGIASLLREILLGQQGLITIWSN 95
BLAST of mRNA_P-lacustris_contig987.16164.1 vs. uniprot
Match: UPI0016866C19 (YggT family protein n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI0016866C19) HSP 1 Score: 89.0 bits (219), Expect = 1.240e-17 Identity = 41/61 (67.21%), Postives = 49/61 (80.33%), Query Frame = 2
Query: 1526 MDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEVLLGQQGILNLMS 1708
+DLN P NL+AWPTEP LRP R ++PP GVDISPIVW+ I SLV E+LLGQQG+L +MS
Sbjct: 33 IDLNKLPYNLIAWPTEPFLRPMRKLVPPLGGVDISPIVWIGIFSLVRELLLGQQGLLTMMS 93
BLAST of mRNA_P-lacustris_contig987.16164.1 vs. uniprot
Match: A0A7S3UWL9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL9_HETAK) HSP 1 Score: 90.9 bits (224), Expect = 2.720e-17 Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 2
Query: 1526 MDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEVLLGQQGILNLMS 1708
+DLN AP NLVAWPTEP+L TR ++PPAFGVDISPIVW+M+ S V+EV LG QGIL L++
Sbjct: 114 IDLNEAPFNLVAWPTEPLLAFTRGVVPPAFGVDISPIVWLMVASFVNEVALGPQGILTLLA 174
BLAST of mRNA_P-lacustris_contig987.16164.1 vs. uniprot
Match: A0A846F7I1_9CYAN (YggT family protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846F7I1_9CYAN) HSP 1 Score: 87.4 bits (215), Expect = 4.300e-17 Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 2
Query: 1526 MDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEVLLGQQGILNLMS 1708
+DLN P NLVAWPTEP+L PTR ++PP GVDI+PI+WV I SL+ E+LLGQQG+L ++S
Sbjct: 34 VDLNQLPYNLVAWPTEPLLIPTRKLVPPIGGVDIAPIIWVAILSLLREILLGQQGLLTMIS 94
BLAST of mRNA_P-lacustris_contig987.16164.1 vs. uniprot
Match: K9T480_9CYAN (Putative integral membrane protein n=2 Tax=Pleurocapsales TaxID=52604 RepID=K9T480_9CYAN) HSP 1 Score: 85.9 bits (211), Expect = 1.450e-16 Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 2
Query: 1526 MDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEVLLGQQGILNL 1702
+DLN P NLVAWPTEP L P R I+PP GVDISPI+WV IC+L+ E+LLGQQGIL +
Sbjct: 34 VDLNRFPFNLVAWPTEPFLIPVRKIVPPLGGVDISPIIWVGICTLLREILLGQQGILTM 92
BLAST of mRNA_P-lacustris_contig987.16164.1 vs. uniprot
Match: A0A1L9QT06_9CYAN (Uncharacterized protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A1L9QT06_9CYAN) HSP 1 Score: 85.5 bits (210), Expect = 1.920e-16 Identity = 37/60 (61.67%), Postives = 49/60 (81.67%), Query Frame = 2
Query: 1526 MDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEVLLGQQGILNLM 1705
++LNS P N+VAWPTEP L P R ++PP GVDI+PI+WV ICSL+ E+L+GQQG+L +M
Sbjct: 34 INLNSFPFNIVAWPTEPFLSPLRKVVPPLGGVDITPIIWVGICSLIRELLIGQQGLLKMM 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig987.16164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig987.16164.1 >prot_P-lacustris_contig987.16164.1 ID=prot_P-lacustris_contig987.16164.1|Name=mRNA_P-lacustris_contig987.16164.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=64bp MDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEVLback to top mRNA from alignment at P-lacustris_contig987:37305..41254+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig987.16164.1 ID=mRNA_P-lacustris_contig987.16164.1|Name=mRNA_P-lacustris_contig987.16164.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=3950bp|location=Sequence derived from alignment at P-lacustris_contig987:37305..41254+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig987:37305..41254+ >mRNA_P-lacustris_contig987.16164.1 ID=mRNA_P-lacustris_contig987.16164.1|Name=mRNA_P-lacustris_contig987.16164.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=384bp|location=Sequence derived from alignment at P-lacustris_contig987:37305..41254+ (Pleurocladia lacustris SAG_25_93)back to top |