mRNA_P-lacustris_contig980.16127.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig980.16127.1 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE) HSP 1 Score: 549 bits (1415), Expect = 1.670e-169 Identity = 417/610 (68.36%), Postives = 451/610 (73.93%), Query Frame = 3
Query: 420 KGLPVVAVDSEIARVDAEVREVLTTMQGNSHNSPNKYEGQSRGFLETTLDALMKEKTQYKEKRLALLQLQDDEEKGVQRDA-DRLSYPSSAGPSXXXXXXXXXXXXXXXXXXSPPGLEAGVEVVPSPSGSFSGEETRTVAEMTIVWTETVTMGTYDAPRKTAELYAPDSILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPDLKVVEYTPAPVRVYGDFAAQAGTYTFAWQGTDGSTVEMRSRFSFTFRKTEPGSPQPWTIVEHHSSSMPTSPLELELKRDGSHPNLAEYAASAAARAGKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-----------------ASRSPIWSGLFRAFSGSAASSTSSNQ---AGVARXXXXXXXXXXVSA-GARAAEEARAEIAKAAEXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKSGAGSINGLQAQAPSGAGSEVHEARGSFSSGASSSQVARTLSFEGSGSVGKDKKAKIHEITAVVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQRLGGVPLGSYKDGIEIFKKQRGAVVLTISRQN 2183
+GLPVVAVD EIARVD EVREVL +QG S SP Y G+S+ LE TLD LM+EKT+YKEKRLALL+LQDD+ K DA D+ P S G A V + SPSGSF+ EETR+V+E T+ WTETVT GTYDAP++TAELYAPD+ILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLP+LKVVEYTPAPVRVYGDFAAQAG+YTF+WQGTDGSTVEMR+RFSFTFR+ P SPQPWTIVEHHSSSMPTSPLELEL R G + NLA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ASRSPIWSGLFRAF+ SAAS+ SS+Q A VA A ARAAE+ARAEI X XXXXXXX XXXXXXXXXXXXXXXXXXXXX E K G S +GLQ P SE HE + SS SSS VAR LSF+G+G+ GKDK AKIH+ITA VGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQ+LGGVPLGSYKDGIEIFKKQRG VVLTISRQN
Sbjct: 98 RGLPVVAVDWEIARVDGEVREVLGALQGKSEGSP--YAGKSKDVLEKTLDDLMREKTEYKEKRLALLELQDDQLKAPGSDAADKPQQPQEKTGS---------------------GAVAEVAIA-SPSGSFAEEETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELELNRVGLNTNLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKASRSPIWSGLFRAFTSSAASAASSDQPAAASVASAPEAKTMTAEEEAEDARAAEQARAEI-------XXXXXXXXXARERSXXXXXXXXXXXXXXXXXXXXXAETKGGRASSSGLQT--PPAPESEHHEEVRASSSAVSSSAVARELSFDGTGA-GKDK-AKIHDITATVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQKLGGVPLGSYKDGIEIFKKQRGPVVLTISRQN 672
BLAST of mRNA_P-lacustris_contig980.16127.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE) HSP 1 Score: 310 bits (795), Expect = 1.050e-87 Identity = 248/626 (39.62%), Postives = 309/626 (49.36%), Query Frame = 3
Query: 438 AVDSEIARVDAEVREVLTTMQGNSHNSPNKYEGQSR------GFLETTLDALMKEKTQYKEKRLALLQLQDDEEKGVQRDADRLSYPSSAGPSXXXXXXXXXXXXXXXXXXSPPGL---EAGVEVVPSPSGSFSGEETRTVAEMTIVWTETVTMGTYDAPRKTAELYAPDSILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPDLKVVEYTPAPVRVYGDFAAQAGTYTFAWQGTDGSTVEMRSRFSFTFRKTEPGSPQPWTIVEHHSSSMPTSPLELELKRDGSHPNLAEYAASAAARAGKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASRSPIWSGLFRAFSGSAASSTSSNQAGVARXXXXXXXXXXVSAGARAAEE---------ARAEIAKAAEXXX--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKSGAGS------INGLQAQAPSGAGSEVHE----------ARGSFSSGASSSQVARTL-------SFEGSGSVGKDKKAKIHEITAVVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQRLGGVPLGSYKDGIEIFKKQRGAVVLTISRQND 2186
A D +I VD EVR L + G + Y G++ +L+ L+ LMKEK Q+KEK+LAL QLQ + K + A+R P+ XXXXXXXXX S + A E P+ + E+ + VA+ T+VW ETVT GTYDAP+KTA LYA D++LWGT VSE VRDTPEQIYAYFDYFARLP+L+VVEYTP VRVYGDFA QAGTYTFA+QG DG TVE R+RFSFTFR+ PGSP+PWTIVEHHSSSMPT+P L+ + P + +A VA + +W + A T++ A A VS R E AR + E V R+ GS + + P H A+ A+SS + TL + + +D ++TA VG GLGL+LG+E++GTRWVV GFR MPDGKPNPAEAAGIEVGDTLQR+GGVPLG+YK+GIE+FKK RG VVLT+ RQND
Sbjct: 33 ATDLDIELVDNEVRRALAAIHGTKKET---YAGRTNETAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELPKRAAKYAERREAPAXXXXXXXXXXXXXXPAATGGFLSSLKNMIISPAPAEPSPAATVPTPEEDRQAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGPDGVTVEKRARFSFTFRRGRPGSPRPWTIVEHHSSSMPTAPAGLKRVGQDAMPKKIVKEITPDQKA--------------------------------------VAETTIVWKDTVTLGTDDAPKKTAALYAPDA------VLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELKHVEPEDDGIDYVAQAVADLSATSSVSSSTLPPSPPPRKGQAMAAFTEDVNHHSVDVTANVGSCGLGLVLGKEEQGTRWVVNGFRSMPDGKPNPAEAAGIEVGDTLQRVGGVPLGTYKEGIELFKKLRGPVVLTVCRQND 599
BLAST of mRNA_P-lacustris_contig980.16127.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI) HSP 1 Score: 304 bits (779), Expect = 8.540e-86 Identity = 244/638 (38.24%), Postives = 302/638 (47.34%), Query Frame = 3
Query: 441 VDSEIARVDAEVREVLTTMQGNSHNS----PNKYEGQSRGFLETTLDALMKEKTQYKEKRLALLQLQDDEEKGVQRDADRLSYPSSAGPSXXXXXXXXXXXXXXXXXXSPPGLEAGVEVVPSPSGSFSGEETRTVAEMTIVWTETVTMGTYDAPRKTAELYAPDSILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPDLKVVEYTPAPVRVYGDFAAQAGTYTFAWQGTDGSTVEMRSRFSFTFRKTEPGSPQPWTIVEHHSSSMPTSPLELELKRDGSHPNLAEYAASAAARAGKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASRSPIWSGLFRAFSGSAASSTSSNQAGVARXXXXXXXXXXVSAGARAAEE---------ARAEIAKAAEXXX--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKSGAGS------INGLQAQAPSGAGS----EVHEARGSFSSGASSSQVA------------------------RTLSFEGSG-----SVGKDKKAKIH--EITAVVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQRLGGVPLGSYKDGIEIFKKQRGAVVLTISRQND 2186
+D +I VD +VR++L +QG S + N+ E Q R FL+ LD LMKEK QYKEKRLALLQLQD E G+ D + Y + AG S PG+ + E+ + VA+ T+VW ETVT GTYDAP+KTA LYA D +LWGT VSE VRDTPEQIYAYFDYFARLP+L+VVEYTP VRVYGDFA QAGTYTFA+QG DG+TVE R+RFSFTFR+ PGSPQPWTIVEHHSSSMPT+P L KR G + +L + VA+ + +W + A T++ A A VS R E AR + E V R+ GS + + P E + S VA E SG S G+ K H ++T +G GLGL+LG+E+ G+RW VKGFR MPDG+PNPA A GIEVGDTLQ+L GV LGSYKDG+E+FKKQ G+VV+T+ RQ++
Sbjct: 34 IDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETE-QGRAFLQKQLDGLMKEKAQYKEKRLALLQLQD-ELPGIPEDGE---YSAPAGKS--------------------PGV-----------ATTEAEDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGL--KRVGPNADLVKVTPKKVE---------------------------------ITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADA------VLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVEPEVDMDTIVQAVSEVSVADKPXXXXXXXXXXXXXXXXXXXXXXXXXXEASGDSAKPSEGQTFKPDTHAVDVTVSLGQHGLGLVLGKEEAGSRWAVKGFRDMPDGQPNPASAGGIEVGDTLQKLDGVTLGSYKDGMEMFKKQSGSVVITVLRQDE 582
BLAST of mRNA_P-lacustris_contig980.16127.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI) HSP 1 Score: 284 bits (727), Expect = 8.930e-79 Identity = 228/622 (36.66%), Postives = 292/622 (46.95%), Query Frame = 3
Query: 438 AVDSEIARVDAEVREVLTTMQGN----SHNSPNKYEGQSRGFLETTLDALMKEKTQYKEKRLALLQLQDDEEKGVQRDADRLSYPSSAGPSXXXXXXXXXXXXXXXXXXSPPGLEAGVEVVPSPSGSFSGEETRT-VAEMTIVWTETVTMGTYDAPRKTAELYAPDSILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPDLKVVEYTPAPVRVYGDFAAQAGTYTFAWQGTDGSTVEMRSRFSFTFRKTEPGSPQPWTIVEHHSSSMPTSPLELELKRDGSHPNLA-----EYAASAAARAGKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASR------------------------SPIWSGLFRAFSGSAASSTSSNQAGVARXXXXXXXXXXVSAGARAAEEARAEIAKAAEXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKSGAGSINGLQAQAPSGAGSEVHEARGSFSSGASSSQVARTLSFEGSGSVGKDKKAKIH-----EITAVVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQRLGGVPLGSYKDGIEIFKKQRGAVVLTISRQND 2186
A++ +I VD +VR++L+ +QG ++ + Q R FL+ LD LM EK QYKEKRLALLQLQ E ++ D + Y + A P EA P+P + + EE + VA T+VW +TVT GTYDAP+KTA LYA D +LWGT VSE VRDTPEQIYAYFDYFARLP+L++VEYTP VRVYGDFA QAGTYTFA+QG DG+TVE R+RFSFTFR+ P SP PWTIVEHHSSSMP +P L KR G + L E + +AG T R SP + ++ F+ QAG V AR + R + ++ + A + A +V + +S + F SV D++ + ++T VG GLG++LGEEKEGTRW VKGFR MPDG PAE AG+EVGDTLQ+L GV LGSYK+G+ +FKKQ G+ LTI RQ++
Sbjct: 33 ALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQ-ELPNLEEDEE---YAAGA-----------------------PEPEA-----PAPPAAPTEEEDKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGL--KRVGPNAELVKVTPKELEVTPEMKAGSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFA---------VQAGTYTFAWQGNDDETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPAGLKRVENDPAAVMDEVVVEDAPAVVAAEEPXXXXXXXXAEAEPDVVXXXXXAAEEPASEEAEEVPDF----SVVPDEEPFVPPTHPVDVTITVGSNGLGVILGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVILGSYKEGMAMFKKQTGSFSLTILRQDE 595
BLAST of mRNA_P-lacustris_contig980.16127.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE) HSP 1 Score: 251 bits (642), Expect = 3.590e-69 Identity = 149/281 (53.02%), Postives = 176/281 (62.63%), Query Frame = 3
Query: 441 VDSEIARVDAEVREVLTTMQGNSHNS----PNKYEGQSRGFLETTLDALMKEKTQYKEKRLALLQLQDDEEKGVQRDADRLSYPSSAGPSXXXXXXXXXXXXXXXXXXSPPGLEAGVEVVPSPSGSFSGEETRTVAEMTIVWTETVTMGTYDAPRKTAELYAPDSILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPDLKVVEYTPAPVRVYGDFAAQAGTYTFAWQGTDGSTVEMRSRFSFTFRKTEPGSPQPWTIVEHHSSSMPTSPLELE 1271
+D +I VD +VR++L +QG S + N+ E Q R FL+ LD LMKEK QYKEKRLALLQLQD E G+ DA ++S + + VA+ T+VW ETVT GTYDAP+KTA LYA D++LWGT VSE VRDTPEQIYAYFDYFARLP+L+VVEYTP VRVYGDFA QAGTYTFA+QG DG+TVE R+RFSFTFR+ PGSPQPWTIVEHHSSSMPT+P L+
Sbjct: 34 IDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETE-QGRAFLQKQLDGLMKEKAQYKEKRLALLQLQD-ELPGIPEDA-----------------------------------------------AYSDQ--KAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLK 251
BLAST of mRNA_P-lacustris_contig980.16127.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE) HSP 1 Score: 271 bits (692), Expect = 4.490e-69 Identity = 219/636 (34.43%), Postives = 285/636 (44.81%), Query Frame = 3
Query: 438 AVDSEIARVDAEVREVLTTMQGN----SHNSPNKYEGQSRGFLETTLDALMKEKTQYKEKRLALLQLQDDEEKGVQRDADRLSYPSSAGPSXXXXXXXXXXXXXXXXXXSPPGLEAGVEVVPSPSGSFSGEETRTVAEMTIVWTETVTMGTYDAPRKTAELYAPDSILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPDLKVVEYTPAPVRVYGDFAAQAGTYTFAWQGTDGSTVEMRSRFSFTFRKTEPGSPQPWTIVEHHSSSMPTSPLELELKRDGSHPNLAEYAA-----------------------------SAAARAGKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASRSPIWSGLFRAFSGSAASSTSSNQAGVARXXXXXXXXXXVSAGARAAEEARAEIAKAAEXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKSGAGSINGLQAQAPSGAGSEVHEARGSFSSGASSSQVARTLSFEGSG---------------SVGKDKKAKIH-----EITAVVGPLGLGLMLGEEKEGTRWVVKGFRVMPDGKPNPAEAAGIEVGDTLQRLGGVPLGSYKDGIEIFKKQRGAVVLTISRQND 2186
A++ +I VD +VR++L+ +QG ++ + Q R FL+ LD LM EK QYKEKRLALLQLQ + K +Q D + + ++ VA TI+W +TVT GTYDAP+KTA LYA D +LWGT VSE VRDTPEQIYAYFDYFARLP+L+VVEYTP VRVYGDFA QAGTYTFA+QG DG TVE R+RFSFTFR+ PGSP PWTIVEHHSSSMP +P L KR G + L + + A A + +P + ++ F+ QAG V AR + R + ++ + E A + + +AP+ +E E + ++ + SV D++ + ++T VG GLGL+LGEEKEGTRW VKGFR MPDG PAE AG+EVGDTLQ+L GV LGSYK+G+ +FKKQ G+ LT+ RQ++
Sbjct: 1176 ALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQELPK-LQEDEEYAADKAA------------------------------------------------VAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGL--KRVGPNAELVKVTPKKLEITPDMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFA---------VQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLKRV----------------ENDPAAVMDDVVVEEAPAVVAAEEPEEPAVVADEPAAEAEPDVVXXXXXXXXXXXXXXXXEVPDFSVVPDEEPFVPTTHPVDVTVTVGSHGLGLVLGEEKEGTRWTVKGFRNMPDGDKGPAEVAGVEVGDTLQKLEGVVLGSYKEGMAMFKKQTGSFSLTVLRQDE 1723
BLAST of mRNA_P-lacustris_contig980.16127.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI) HSP 1 Score: 239 bits (609), Expect = 9.050e-63 Identity = 142/309 (45.95%), Postives = 180/309 (58.25%), Query Frame = 3
Query: 411 AVAKGLPVVAVDSEIARVDAEVREVLTTMQ-----GNSHNSPNKYEGQSRGFLETTLDALMKEKTQYKEKRLALLQ-----------LQDDEEKGVQRDADRLSYPSSAGPSXXXXXXXXXXXXXXXXXXS-----PPGLEAGVEVVPSPSGSFS-GEETRTVAEMTIVWTETVTMGTYDAPRKTAELYAPDSILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPDLKVVEYTPAPVRVYGDFAAQAGTYTFAWQGTDGSTVEMRSRFSFTFRKTEPGSPQPWTIVEHHSSSMPTSPLELE 1271
A + + + A+D ++A VD +VR +L +Q G ++ + Q + FL+ +D LM+EK QYKEKR+ L+Q V + L P + PS S P G PSP+ S + E+ R VAE T++W +TVT GTYDAP+KTA LYAPD LWGT VSE VRDTP+QIYAYFDYFARLP+L+VVEYTP VRVYGDFA QAGTYTF+WQ DG+ VE R+RFSFTFR+ PG+ +PWTIVEHHSSSMPT+P L+
Sbjct: 16 AASTAVSLAAIDWDVALVDKDVRRLLEVLQDDGAEGKTYAGRSNSTPQGKAFLQNQVDGLMREKAQYKEKRMVLMQRXXXXXXXXXXXXXXXXXSVANSSSEL--PKATPPSLPQTPTNDNSTHSTSRRGSFPLGPRPSPAPGSLRAPSPAKSATEAEDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGT------------VSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLK 310
BLAST of mRNA_P-lacustris_contig980.16127.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE) HSP 1 Score: 213 bits (541), Expect = 2.770e-55 Identity = 103/149 (69.13%), Postives = 117/149 (78.52%), Query Frame = 3
Query: 825 RTVAEMTIVWTETVTMGTYDAPRKTAELYAPDSILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPDLKVVEYTPAPVRVYGDFAAQAGTYTFAWQGTDGSTVEMRSRFSFTFRKTEPGSPQPWTIVEHHSSSMPTSPLELE 1271
R VAE T++W +TVT GTYDAP+KTA LYAPD LWGT VSE VRDTP+QIYAYFDYFARLP+LKVVEYTP VRVYGDFA QAGTYTF+WQ DG+ VE R+RFSFTFR+ PG+ +PWTIVEHHSSSMPT+P L+
Sbjct: 29 RAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGT------------VSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLK 165
BLAST of mRNA_P-lacustris_contig980.16127.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE) HSP 1 Score: 190 bits (482), Expect = 1.570e-50 Identity = 101/170 (59.41%), Postives = 120/170 (70.59%), Query Frame = 3
Query: 762 GLEAGVEVVPSPSGSFSGEETRTVAEMTIVWTETVTMGTYDAPRKTAELYAPDSILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPDLKVVEYTPAPVRVYGDFAAQAGTYTFAWQGTDGSTVEMRSRFSFTFRKTEPGSPQPWTIVEHHSSSMPTSPLELE 1271
GL A V V S + + + + V + TI W E VT+GT DAPRKTA+LYA D +LWGT VSE VRDTPE+IY YFDYFARLP+L++ E+TP +RVYGDFA +AGTYTF WQG DG E R+RFSFTFR +P SP WTIVEHHSSSMPTSPL+L+
Sbjct: 85 GLTA-VPVTRSAGAAVTEGDRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGT------------VSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRS-DPESPTSWTIVEHHSSSMPTSPLQLK 240
BLAST of mRNA_P-lacustris_contig980.16127.1 vs. uniprot
Match: A0A6H5KT10_9PHAE (DUF4440 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT10_9PHAE) HSP 1 Score: 173 bits (438), Expect = 8.240e-42 Identity = 93/175 (53.14%), Postives = 115/175 (65.71%), Query Frame = 3
Query: 843 TIVWTETVTMGTYDAPRKTAELYAPDSILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPDLKVVEYTPAPVRVYGDFAAQAGTYTFAWQGTDGS---TVEMRSRFSFTFRKTEP--GSPQPWTIVEHHSSSMPTS------PLELELKRDGSHPNLAEYAASAAARA 1334
T +W ETVT+GT+DAPRK A+LYAPD +LWGTE SE VR+TPEQIYAY+DYFARLP+L++VE+T AP RV GDFA+Q+GT+TF+W+G G TVE+R+RFS TFRK G P W IVEH + SMPT+ P LK GS ++ A A A
Sbjct: 199 TKLWAETVTLGTFDAPRKAADLYAPDGVLWGTEAFAFDDPLWEYASELVRNTPEQIYAYYDYFARLPELRLVEFTAAPARVRGDFASQSGTHTFSWRGAGGQEEYTVEVRARFSLTFRKDRCSCGGPSEWAIVEHCTFSMPTAAAAANPPSARVLKHVGSATDVVVKTVKAVAEA 373 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig980.16127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig980.16127.1 >prot_P-lacustris_contig980.16127.1 ID=prot_P-lacustris_contig980.16127.1|Name=mRNA_P-lacustris_contig980.16127.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=1821bp MQGNSHNSPNKYEGQSRGFLETTLDALMKEKTQYKEKRLALLQLQDDEEKback to top mRNA from alignment at P-lacustris_contig980:51811..70773- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig980.16127.1 ID=mRNA_P-lacustris_contig980.16127.1|Name=mRNA_P-lacustris_contig980.16127.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=18963bp|location=Sequence derived from alignment at P-lacustris_contig980:51811..70773- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig980:51811..70773- >mRNA_P-lacustris_contig980.16127.1 ID=mRNA_P-lacustris_contig980.16127.1|Name=mRNA_P-lacustris_contig980.16127.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=10926bp|location=Sequence derived from alignment at P-lacustris_contig980:51811..70773- (Pleurocladia lacustris SAG_25_93)back to top |