mRNA_P-lacustris_contig976.16077.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig976.16077.1
Unique NamemRNA_P-lacustris_contig976.16077.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig976.16077.1 vs. uniprot
Match: D8LK51_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK51_ECTSI)

HSP 1 Score: 421 bits (1083), Expect = 1.570e-140
Identity = 203/230 (88.26%), Postives = 212/230 (92.17%), Query Frame = 3 
Query:  534 PDKLQTLKDYRLTIEYKHLRQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPVIRFTSSVFNPMVSPTTGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPHPANPEAQALFQDDKRGFLERIEACVRESQETVYENEEGSSLRFTEPKPAHDKLREKILGTDQLARPSPLPAGEREVKFGTAATTGAKRGPSDDQEPEENQGR 1223
            PDKLQTLKDYRLTIEYKHL+QNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWP+IRFTSSVFNPMVSP TGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFP PANPEAQALFQDDKRGFLER+EACVRESQETVYENEEGSSLRFTEPKPAHDKLREKILGTDQ A+ S  P G RE+K  TAATTGA  G ++    +E+ GR
Sbjct:    6 PDKLQTLKDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLREKILGTDQAAKSSLPPTGTRELKVSTAATTGAGEGSTEADRTQEHSGR 235
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BLAST of mRNA_P-lacustris_contig976.16077.1 vs. uniprot
Match: A0A7S2V268_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V268_9STRA)

HSP 1 Score: 269 bits (687), Expect = 5.560e-81
Identity = 118/192 (61.46%), Postives = 154/192 (80.21%), Query Frame = 3 
Query:  537 DKLQTLKDYRLTIEYKHLRQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPVIRFTSSVFNPMVSPTTGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPHPANPEAQALFQDDKRGFLERIEACVRESQETVYENEEGSSLRFTEPKPAHDKLREKILGTDQLAR 1112
            +++Q L+DY+LTIEYKHL+Q+APGGVFVIPS   LR+W+GVIFVRRGHY+ G+FKFRV+LP +YN   TWP + FTS VFNP+V P TGELDL+S +PEW P +HYMVT LT+LKK+FYMK F  P+PANP AQ LF  +K  FLE +  CVRES+E +++N+ GSSL+F+EPKPAH+ LR+ I  +++  +
Sbjct:   35 EQMQALRDYKLTIEYKHLKQHAPGGVFVIPSFESLRVWWGVIFVRRGHYSKGIFKFRVDLPDEYNGPNTWPKVTFTSRVFNPLVFPQTGELDLKSAYPEWNPERHYMVTVLTFLKKIFYMKSFDGPNPANPVAQNLFHSNKVEFLEEVNNCVRESKENIFKNDPGSSLKFSEPKPAHESLRKSIFESEEFLK 226
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BLAST of mRNA_P-lacustris_contig976.16077.1 vs. uniprot
Match: A0A836CDQ7_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ7_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.890e-69
Identity = 113/201 (56.22%), Postives = 146/201 (72.64%), Query Frame = 3 
Query:  537 DKLQTLKDYRLTIEYKHLRQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPVIRFTSSVFNPMVSPTTGELDLRSVFPEWLP-GKHYMVTALTYLKKVFYMKDFSFPHPANPEAQALFQDDKRGFLERIEACVRESQETVYENEEGSSLRFTEPKPAHDKLREKILGTDQLARPSPLPAGE 1136
            D+ + LKDY++ +EYKHL Q+APGGV+V P ++ LRIW+GVIFVRRG YANG+FKF VELP +Y DAG WP + F S+VFNP+V P+ GELDLR + P W P G   M+  +TY+KK+FY KDF+   P NPEAQ +F+D+K GF ER  ACV ES    YE+  GSSL+FTEP+PAHD +  +ILG  Q+  P+    G+
Sbjct:   21 DRDRALKDYKIAVEYKHLWQHAPGGVYVTPDLDDLRIWHGVIFVRRGMYANGMFKFSVELPQNYGDAGAWPRLVFMSTVFNPLVKPSNGELDLRLMMPGWNPAGGDCMLKVITYMKKIFYTKDFALAAPPNPEAQRMFRDNKSGFAERAAACVEESLSRRYESPPGSSLKFTEPRPAHDSVAARILGA-QIGVPAAAGGGD 220
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BLAST of mRNA_P-lacustris_contig976.16077.1 vs. uniprot
Match: A0A7S2R8I5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8I5_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.410e-63
Identity = 103/192 (53.65%), Postives = 136/192 (70.83%), Query Frame = 3 
Query:  540 KLQTLKDYRLTIEYKHLRQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPVIRFTSSVFNPMVSPTTGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFS---FPHPANPEAQALFQDDKRGFLERIEACVRESQETVYENEEGSSLRFTEPKPAHDKLREKILGTDQL 1106
            + Q LKD +LTIEYKHL+QN+PGGV V+PS   LRIW GVIFVR+G Y +G+FKF + +P +YND   WP +RF S V NP V+P TG LDLRS FP+W P  H+MV+ LT+LKK+FY+KD     +  PANPEA  +F  D+  + +R+E  V  SQ TVYEN   S L F++P+ AHD++R+ +L T+ L
Sbjct:   46 RTQALKDLKLTIEYKHLKQNSPGGVLVVPSFEDLRIWNGVIFVRKGLYQDGIFKFVITIPAEYNDRNVWPEVRFVSEVVNPYVNPQTGILDLRSNFPQWDPNSHFMVSVLTFLKKIFYLKDSDVADYRKPANPEALRMFMRDRAQYRQRVEELVATSQSTVYENPHESPLAFSQPQAAHDQVRQTLLETEDL 237
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BLAST of mRNA_P-lacustris_contig976.16077.1 vs. uniprot
Match: A0A7S1ZU80_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZU80_TRICV)

HSP 1 Score: 220 bits (561), Expect = 5.920e-63
Identity = 110/223 (49.33%), Postives = 148/223 (66.37%), Query Frame = 3 
Query:  537 DKLQTLKDYRLTIEYKHLRQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPVIRFTSSVFNPMVSPTTGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPHP-ANPEAQALFQDDKRGFLERIEACVRESQETVYENEEGSSLRFTEPKPAHDKLREKILGTDQLARPSPLPAGEREVKFGTAATTGAKRGPSDDQE 1202
            ++ Q L+DY++TIEYKHL+Q+APGGV+++PS+  LR+++GV+FVRRG + NGVFKFRV LPP YND    P I F S V+NP V P TGELD++  +P W P +HY+VT LTYLKK+FYMK F    P ANPEA+ L + D + +  R+EACVRESQ +V+ NEEG +  F E +  H  LRE  L  ++L  P+ +   +     G A     + G  D  E
Sbjct:   31 EREQALRDYKVTIEYKHLKQHAPGGVYLVPSLTDLRLFHGVVFVRRGPFTNGVFKFRVSLPPRYNDFNAHPSIHFGSYVYNPHVDPETGELDVKGAYPTWDPHRHYLVTVLTYLKKIFYMKTFGTDEPVANPEARELVRRDPKEYRRRVEACVRESQRSVFVNEEGCTAEFHEDRVCHQILRE--LMKERLKDPATMTRAQILEMVGEAKAEDERDGGGDGTE 251
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BLAST of mRNA_P-lacustris_contig976.16077.1 vs. uniprot
Match: A0A7R9W3Q1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3Q1_9STRA)

HSP 1 Score: 217 bits (553), Expect = 5.050e-62
Identity = 97/181 (53.59%), Postives = 139/181 (76.80%), Query Frame = 3 
Query:  537 DKLQTLKDYRLTIEYKHLRQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPVIRFTSSVFNPMVSPTTGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPHPANPEAQALFQDDKRGFLERIEACVRESQETVYENEEGSSLRFTEPKPAHDKLR 1079
            ++ Q+L+DY++TIEYKHL+Q+APGGV++IPS++ LR+++GVIFVRRG + NG+FKFRV+LPP YND   WP I F+S V+NP V+P TGELD+++ +P W P +HY+VT LTYLKK+FYMK F     ANP+A+ L + +   + +++EACVRESQ +V+ NE   + +F+E +  H  LR
Sbjct:   50 EREQSLRDYKVTIEYKHLKQHAPGGVYLIPSLDDLRVFHGVIFVRRGPFTNGIFKFRVKLPPRYNDVNAWPQIVFSSYVYNPHVNPETGELDVQAAYPTWDPHRHYLVTVLTYLKKIFYMKGFGEEARANPDARDLARSNPPAYRKKVEACVRESQRSVFVNEPDCTAKFSEDEVCHQVLR 230
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BLAST of mRNA_P-lacustris_contig976.16077.1 vs. uniprot
Match: A0A7S1VY26_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VY26_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.060e-61
Identity = 98/182 (53.85%), Postives = 137/182 (75.27%), Query Frame = 3 
Query:  537 DKLQTLKDYRLTIEYKHLRQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPVIRFTSSVFNPMVSPTTGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPHPANPEAQALFQDDKRGFLERIEACVRESQETVYENEEGSSLRFTEPKPAHDKLRE 1082
            ++ Q L+DY++TIEYKHLRQ+APGGV++IPS+  LR +YGVIFVRRG + NG+FKF+++LPP YND  TWP I FTS+VFNP V P TGELD++S +P W P +HY+VT LT+LKK+FY+K F     AN EA+ L + +   +  +++ CVR+SQ+ V+ NE+G + +FTE   +H  LR+
Sbjct:   42 EREQALRDYKVTIEYKHLRQHAPGGVYLIPSLTDLRHFYGVIFVRRGPFTNGIFKFQLKLPPTYNDLNTWPTITFTSNVFNPHVHPKTGELDVKSAYPRWDPHRHYLVTILTFLKKIFYVKTFGPDAKANKEAKKLAEKEPAAYRLKVDECVRDSQKDVFVNEDGCTAKFTEETLSHRVLRD 223
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BLAST of mRNA_P-lacustris_contig976.16077.1 vs. uniprot
Match: A0A024G8I5_9STRA (UBC core domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G8I5_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.070e-60
Identity = 98/186 (52.69%), Postives = 134/186 (72.04%), Query Frame = 3 
Query:  546 QTLKDYRLTIEYKHLRQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPVIRFTSSVFNPMVSPTTGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFS--FPHPANPEAQALFQDDKRGFLERIEACVRESQETVYENEEGSSLRFTEPKPAHDKLREKILGT 1097
            QT+KDY L IEYKHLRQ+ P G++V+PS ++ RIWYG IF+ +G Y NG+FKF +E+P DYN  GT+P I F+SS+F+P VSP T +LDL++ FPEW P  HYMV ALT+LK +FYMK+F     + ANP A  LF D+   ++  +E CV  S E+V+++E  SS+RFT P PAH+ LR++   +
Sbjct:   38 QTMKDYGLMIEYKHLRQHVPAGIYVLPSFDNSRIWYGTIFIHQGLYRNGIFKFTIEIPSDYNGPGTYPSIVFSSSIFHPYVSPQTRKLDLKAKFPEWDPELHYMVAALTFLKSIFYMKEFPEILDNVANPNALKLFHDELETYVTNVERCVSGSLESVFDDEPNSSIRFTRPIPAHENLRKEFFAS 223
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BLAST of mRNA_P-lacustris_contig976.16077.1 vs. uniprot
Match: F0W1H7_9STRA (Uncharacterized protein AlNc14C7G945 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1H7_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.180e-60
Identity = 97/186 (52.15%), Postives = 134/186 (72.04%), Query Frame = 3 
Query:  546 QTLKDYRLTIEYKHLRQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPVIRFTSSVFNPMVSPTTGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDF--SFPHPANPEAQALFQDDKRGFLERIEACVRESQETVYENEEGSSLRFTEPKPAHDKLREKILGT 1097
            QT+KDY L IEYKHLRQ+ P G++V+PS ++ RIW+G IF+ +G Y NG+FKF +E+P DYN  GT+P I F+++VF+P VSP T +LDL++ FPEW P  HYMV ALT+LK +FYMK+F  +  + ANP A  LF D+   ++  +E CV  S E VYE++  SS+RFT P PAH+ LR++   +
Sbjct:   38 QTMKDYGLMIEYKHLRQHVPAGIYVLPSFDNSRIWFGTIFIHQGLYRNGIFKFTIEIPSDYNGPGTYPSITFSTAVFHPYVSPQTRKLDLKAKFPEWDPELHYMVAALTFLKSIFYMKEFPETINNVANPNALKLFHDELETYVTNVERCVSGSLENVYEDDSSSSIRFTRPTPAHENLRKEFFAS 223
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BLAST of mRNA_P-lacustris_contig976.16077.1 vs. uniprot
Match: A0A1V9YIR1_9STRA (UBC core domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIR1_9STRA)

HSP 1 Score: 213 bits (541), Expect = 7.700e-60
Identity = 100/219 (45.66%), Postives = 145/219 (66.21%), Query Frame = 3 
Query:  540 KLQTLKDYRLTIEYKHLRQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPVIRFTSSVFNPMVSPTTGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFS--FPHPANPEAQALFQDDKRGFLERIEACVRESQETVYENEEGSSLRFTEPKPAHDKLREKIL-------------GTDQLARPSPLPAGEREVKF 1151
            + QT+KDY L IEYKH++Q+ P G++V+PS +  R+W+GVIF+ +G Y NG+FKF + LP DYN  GT+P + F + VF+P V+P T ELDL   FP W P  HY+V+ L Y+K +FY K+F+    + ANP A  +F+     ++E+I+ACV +S ET+Y+NE GSSLRFT+P PAH+KLR++ L               D +   +P+PA E E ++
Sbjct:   38 RTQTMKDYGLMIEYKHMKQHVPSGIYVLPSFDKPRLWHGVIFIHQGLYRNGIFKFSIHLPDDYNGIGTYPRVVFYTKVFHPFVNPDTNELDLLPKFPTWDPDLHYIVSVLVYMKSIFYTKEFASDLRNVANPRALEMFRRHPETYVEQIDACVEKSLETMYQNEPGSSLRFTKPIPAHEKLRQEFLQQLGGQDTAGADDSPDDVHMTAPIPASEEEEEY 256
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig976.16077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK51_ECTSI1.570e-14088.26UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S2V268_9STRA5.560e-8161.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CDQ7_9STRA1.890e-6956.22Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S2R8I5_9STRA2.410e-6353.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1ZU80_TRICV5.920e-6349.33Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7R9W3Q1_9STRA5.050e-6253.59Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S1VY26_9STRA1.060e-6153.85Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A024G8I5_9STRA1.070e-6052.69UBC core domain-containing protein n=1 Tax=Albugo ... [more]
F0W1H7_9STRA1.180e-6052.15Uncharacterized protein AlNc14C7G945 n=1 Tax=Albug... [more]
A0A1V9YIR1_9STRA7.700e-6045.66UBC core domain-containing protein n=1 Tax=Achlya ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig976contigP-lacustris_contig976:57682..62184 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.4
Seed ortholog evalue2e-63
Seed eggNOG ortholog2880.D8LK51
Preferred nameAKTIP
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000209,GO:0000228,GO:0000785,GO:0000790,GO:0000792,GO:0001932,GO:0001934,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006810,GO:0006950,GO:0006974,GO:0006996,GO:0007032,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009893,GO:0009987,GO:0010256,GO:0010498,GO:0010562,GO:0010604,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016482,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016740,GO:0019220,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0019941,GO:0030163,GO:0031323,GO:0031325,GO:0031371,GO:0031399,GO:0031401,GO:0031625,GO:0031974,GO:0031981,GO:0032092,GO:0032268,GO:0032270,GO:0032446,GO:0032991,GO:0033503,GO:0033554,GO:0034641,GO:0036211,GO:0042325,GO:0042327,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043393,GO:0043412,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045022,GO:0045937,GO:0046483,GO:0046907,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051099,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051276,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0061630,GO:0061659,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0070695,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080171,GO:0090304,GO:0098927,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1990234
EggNOG free text desc.sperm individualization
EggNOG OGsKOG0429@1,KOG0429@2759
Ec32 ortholog descriptionUbiquitin-conjugating enzyme/RWD-like
Ec32 orthologEc-06_008200.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size2263
Cds size444
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817406.8995001-UTR-P-lacustris_contig976:57681..587181622817406.8995001-UTR-P-lacustris_contig976:57681..58718Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig976 57682..58718 -
1693495043.972668-UTR-P-lacustris_contig976:57681..587181693495043.972668-UTR-P-lacustris_contig976:57681..58718Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig976 57682..58718 -
1622817406.9482362-UTR-P-lacustris_contig976:60353..604291622817406.9482362-UTR-P-lacustris_contig976:60353..60429Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig976 60354..60429 -
1693495044.021512-UTR-P-lacustris_contig976:60353..604291693495044.021512-UTR-P-lacustris_contig976:60353..60429Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig976 60354..60429 -
1622817406.961118-UTR-P-lacustris_contig976:60724..608721622817406.961118-UTR-P-lacustris_contig976:60724..60872Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig976 60725..60872 -
1693495044.030799-UTR-P-lacustris_contig976:60724..608721693495044.030799-UTR-P-lacustris_contig976:60724..60872Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig976 60725..60872 -
1622817406.9721994-UTR-P-lacustris_contig976:61626..621841622817406.9721994-UTR-P-lacustris_contig976:61626..62184Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig976 61627..62184 -
1693495044.0405097-UTR-P-lacustris_contig976:61626..621841693495044.0405097-UTR-P-lacustris_contig976:61626..62184Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig976 61627..62184 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817406.9107978-CDS-P-lacustris_contig976:58718..588771622817406.9107978-CDS-P-lacustris_contig976:58718..58877Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 58719..58877 -
1693495043.9865499-CDS-P-lacustris_contig976:58718..588771693495043.9865499-CDS-P-lacustris_contig976:58718..58877Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 58719..58877 -
1622817406.9224026-CDS-P-lacustris_contig976:59797..599141622817406.9224026-CDS-P-lacustris_contig976:59797..59914Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 59798..59914 -
1693495043.9990876-CDS-P-lacustris_contig976:59797..599141693495043.9990876-CDS-P-lacustris_contig976:59797..59914Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 59798..59914 -
1622817406.936395-CDS-P-lacustris_contig976:60185..603531622817406.936395-CDS-P-lacustris_contig976:60185..60353Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 60186..60353 -
1693495044.0119722-CDS-P-lacustris_contig976:60185..603531693495044.0119722-CDS-P-lacustris_contig976:60185..60353Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 60186..60353 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig976.16077.1prot_P-lacustris_contig976.16077.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig976 58719..60353 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig976.16077.1

>prot_P-lacustris_contig976.16077.1 ID=prot_P-lacustris_contig976.16077.1|Name=mRNA_P-lacustris_contig976.16077.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=148bp
MVSPTTGELDLRSVFPEWLPGKHYMVTALTYLKKVFYMKDFSFPHPANPE
AQALFQDDKRGFLERIEACVRESQETVYENEEGSSLRFTEPKPAHDKLRE
KILGTDQLARPSPLPAGEREVKFGTAATTGAKRGPSDDQEPEENQGR*
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mRNA from alignment at P-lacustris_contig976:57682..62184-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig976.16077.1 ID=mRNA_P-lacustris_contig976.16077.1|Name=mRNA_P-lacustris_contig976.16077.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4503bp|location=Sequence derived from alignment at P-lacustris_contig976:57682..62184- (Pleurocladia lacustris SAG_25_93)
ACGGTGCAATTGTGCATACAAGGAGTGGCGCGCCGATGATACCTACTGTA
CTGCATCGATAGGAGTTGAACCGCGACGGTGCATTTGTACATACAAGGAG
TGGCGCGCCGATGATACCTACTGCTGTACTGCATCGATAGGAGTTGCCCG
GAGCCACTGCGTAATCTTGATTTTTCATTGGTGTTTTGGTGTTTTCCCAC
AATGGGGGAACACCGATACCGACGAGAAAATGAAATTAATAGCATGCCGT
TCTCCTATGATGTTTTGTGCGTTATCTTGAAATCAATGTCGTCCTGCTCT
TTCTCGCTATGTCGTAACCGCGGGGTGCGTTCTTACGCACATTTTTGGTT
GGTCGTGTTCTCTCTTTATCTCGTTCCCTCTCTTTTGAAATGCCATGAAT
GTTGTTGTGCTTCTGCCTACGAACCCTGCCCACTTGTTAGGATCAATGCT
TTACACACGCAGCCCACCCGAACGCACGTTTGTGTGCTGTACTCGTCTCT
TGTCCTACCTGCCGGCGCTGCTTTGAATTTTAGCCCGACAAACTCCAAAC
GTTAAAAGGTGAGCTCCGTACAACAGCCATAGCTCCGCCCACAAGCCCCG
TGCCTCAAAATGTAAAAATACAAAAATACAGAGTGCTGTCCGCTCATATA
TCACCACATGTTAATGCTCACCCTAGTTTGCTTCATGTGAGGCGAAGCTT
ATCAGGTTCATAAACGTCGGTGGGTAGAGGAGCGCGGACTGTTGGCGTTA
GACAGTCATTCATACGCTCGTGAGCCATCCTCAGTTGGAACCTTATCTAT
GGCAGTATTACTCACAAAGTCGGCCCAGCCATTTCTTCAGGCAGAAAATT
TGTCTCGCTTGAAGCTGAGGGCAGTCTAACACTCGAAATATTTGCAACAC
CCCTCCGTCAATGATGCTTTGCTTTGTGAACAAGGAAAATGGAGCTGGTT
GATTTGAATATAGCCAGAACAACAACCTCAAGGGGTTCAAGTACCGCGGC
AACCAATCAAACATTCAAGTGAAATGGCCTGTCAGAACAATATTCACGAG
AACGAAAGATGCAACCTTTCCAGGAGGCGATATTAAGGCACTTCGTTTAT
GAGTTTTGATTCAGGGCGATCAAAATCGGAGGAGGTAAATAGCAGAATTG
TTCAGGCCGTCAAGACTTGTATTGTGGTTCGTTAGGCGTGCGACAAAGGT
TGGGCGTAGGCCGTGTCTACAAAAATCTCGCGAAATGACATCGTCAACCC
ATGACCAAAATTCTATTTTCCTCGTTCCTCTTCCGCCCGGCATGGACCCG
CGATCTGCCAAGACTACCGTCTGACTATCGAGTACAAGCATTTGAGGCAG
AATGCGCCAGGGGGAGTGTTCGTCATCCCCAGCGTCAACCACTTACGTAT
CTGGTACGGAGTGATTTTTGTGCGTCGCGGTCACTACGCCAATGGGGTCT
TCAAGTTCAGGTGTGCGCGCTGCAGACCATCAGAAGTGGGTGCATGAAAA
AGCCTGTTCTGTTGGCGAACGAGGCACGGCTATAGTGCTCATACTAGGAA
GGATCAATTCGTATATTACATGTATTTTTTGCATTGTGCCCAAAGTAGCG
CCGCTGTTGCCAGGGCTTCAAGCCCAGCGAATGATCGCAGGCTCAAGAGT
CTTGATACGCGACCCGTCCAAGCTAGGCCATGCCATGCAGCCACGTTCGA
ATACCACTCACTTCGTCGGCGACTCTGTTTGGCTGCCCGGGTCGGACACC
ATCAGGGTGGAGCTACCTCCAGATTACAACGATGCCGGCACGTGGCCGGT
CATCCGCTTCACGAGCTCGGTATTCAACCCGATGGTGTCACCGACCACTG
GAGAGCTAGACCTCAGATCTGTGTTTCCAGAGTGGTTACCCGGGAAACAC
TACATGGTGACGGCCCTCACGTACCTCAAGAAGGTTTTCTACATGAAGGA
CTTCTCCTTCCCTCATCCAGCTAATCCGGAGGCACAAGCACTGTTCCAGG
TGGTCATCCACGTTTCCGCTTTATCGATGAAATGCGCTTTTTCGTACACA
AATCAGCGAGTCACACAAGCTCTACAAGCTAGATAGGCTTTCTTCGGTTG
TTTGTGTCTTTCTTTCGTGACCCATGTTTGGTCACGACTGGTGGGTGGAG
GGTACTGGATAGGGCGTACGGCGATGATGAAGCACATGGTACCTTTTTGT
TGTTTTCATTACGCCTGCCCTACCACATGTTTATGTCCCTACTCGATGCT
CTGATCAATCTGTCCAACAGGACGACAAGCGGGGCTTCCTTGAAAGAATC
GAAGCGTGCGTGCGCGAGAGTCAGGAGACTGTGTACGAGAACGAAGAAGG
GTCTAGCTTGCGCTTCACCGAGCCCAAGCCCGCACATGTATGAAGAGCGT
GCGACAAAGCGTTTGAGGAAAGGAGGGCAAGGGGGAAGTCCTATTTCAAT
CATGGCTTACCTCTCTATTGTTGAAACTTGCCACGCACCGAGTATGTTTG
GACTTTTATAACTGAGTTGGTATTCTCGTCTCATTCCCAGCGTTCCTGAC
TGTTTCTAGAAGGCTGTGTGTTTGGCTATGTATTGAATTAGCTTGATTTC
GTCAGTTGGAGCAAGCCCAGCAGGACTCGTGCGGATCCTCAAGTATGAAA
ATCGGGAAACCCTACTGGCTATCTTTGATAAACTTCTCTTGAAAGGACAT
GGCCCAAGAACCTTGCCCTGCATGGTCTGCGCCGTGATCCACACTGCTTT
CTGTTTGTGCACGCTTGACTGGAGGACAAGTGGACCAGTGTTGTTGACTG
AATACTGCCGTTTGAGAGGCCGAGATAGGTTTTTCCACGAGGCTTGAGCG
CCACCGTACAGCCACTGCTGTGCTTATAGGAAGTACAACCGATAGCATGT
GCGTGTATGTGTACACGCAAGTATCTCGATCAATTGATGGGTGTTCACGC
AAAGTCAAGACGCTTTCGAGTTGTTCTCTTTTGTCCCACCTCATACCATA
CCGCCCGTGCTACACCCCACGTCAAGACTCAAAACAATCGAAGTGTCAAT
CATGACTATAGCACTGAGACAGGCAGTAGGGACAAGTATCGTCAACGTGC
ACAATAGCGATTTTGTGCACGAGTGGAGGGAGAGAATAAATTCCGCCTGA
CGGTCCGTCCGCTCATGGCAAAAGCTTGCTGCTTCATTTCTTTTTCTTTG
CTGCTTCATTTCTTTTTCTTTGTTCAGGCTGCCATTTGAACTTGACGCCT
GGACGCCTGCTCACGTGTTAACAATATCTTTGTCGCATTCCGCTGTGTCT
TGAACAGGACAAGCTCAGGGAGAAGATTTTGGGTACGGATCAGCTAGCGA
GGCCGTCGCCGTTGCCTGCAGGGGAACGAGAAGTGAAATTCGGTACGGCA
GCAACAACGGGTGCTAAGAGAGGACCATCTGATGACCAAGAACCGGAAGA
AAACCAGGGTCGATGACGTGGGTCGGTTGCTGCAGCAGGGGTGTCGTTGT
CTTTGTTTCTGGGCGGGCGGGGGTTACAATAGCATGCGGTTCATCATCGC
TTCGGGTACTGATAGCAAAACCAACAACTTGTTTGGGCATTCTGACCGTG
AGTGTTATATGTGTGTGTGGCGAAAGCTTGCGAGCGTGGTGTTTGATCAT
GTGAAGACACCGACAGGGGGGCAAACGGATGAGTGACGAGGTGTGCGGAG
AGTGGCGATCAACTCTTGCGCCTGACCCACCATTCTTTGCCCGGTGTGTG
TGCGTGTTTTTTCTTATTAGAAGGGGATTTGAAGGGATCAGTCTCGTCAG
CAATCGACGCTTTCTTGCGTCCCAACATGCAGTAGGAAGCCTCCCAGAAA
AACGTCTACAGCCAACAACCAGTCCGATGGCGAATTACGGGGACCTCTCC
AACGTCTACAAGCGGGTCGGGGGCACATAGACTGCGTTATTTTTGGTTAG
CTGGTTGCCGCCGTCGATGCTGCAGAGAGAAGCGCACACATGTCTCGAAG
CCGTGACTTTTTTCAAGATCAAAGGAGCCATAGACCGTGCATTTGCAACG
TAGGAAGATACGTCGTCGTAGTCATTTATTCATATTGGTCAAGATTGATT
CCGTTTCGAGACGCTCGAAGACCCGGATAGAGGCCCCACCCTGGTCGCAA
CTCGATAGAGGACCCTAACCTGGTCCCAACGGTCGCCTGTGGGTGGTACA
ATGTAAGCGCGTACGTACAAAAGTGATCATAGGTTCGATGGAAGATGAAG
TCACACGATTTGAGGATTTTTCTCACAACGAGCGTGCCTAGGAGCGACAA
AAGTTGAGGCAAGCACCGCAGAAGGAAGATGGGGAAACAACTCGTCGGCC
TCGGCTGATGCACCTGCCTACAGAATCACCGAAAGGTGAAGGCTGGCGTC
CAGAATAGTAGATGGAACAACAAACATGTGTGTGTGTATTTTTGTGTTTG
GTTGGCAAGCAATGTGACACTCTCTCATTCCATCCGTTTTCACCGTAATC
GCC
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Coding sequence (CDS) from alignment at P-lacustris_contig976:57682..62184-

>mRNA_P-lacustris_contig976.16077.1 ID=mRNA_P-lacustris_contig976.16077.1|Name=mRNA_P-lacustris_contig976.16077.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=888bp|location=Sequence derived from alignment at P-lacustris_contig976:57682..62184- (Pleurocladia lacustris SAG_25_93)
ATGGTGTCACCGACCACTGGAGAGCTAGACCTCAGATCTGTGTTTCCAGA
GTGGTTACCCGGGAAACACTACATGGTGACGGCCCTCACGTACCTCAAGA
AGGTTTTCTACATGAAGGACTTCTCCTTCCCTCATCCAGCTAATCCGGAG
GCACAAGCACTGTTCCAGATGGTGTCACCGACCACTGGAGAGCTAGACCT
CAGATCTGTGTTTCCAGAGTGGTTACCCGGGAAACACTACATGGTGACGG
CCCTCACGTACCTCAAGAAGGTTTTCTACATGAAGGACTTCTCCTTCCCT
CATCCAGCTAATCCGGAGGCACAAGCACTGTTCCAGGACGACAAGCGGGG
CTTCCTTGAAAGAATCGAAGCGTGCGTGCGCGAGAGTCAGGAGACTGTGT
ACGAGAACGAAGAAGGGTCTAGCTTGCGCTTCACCGAGCCCAAGCCCGCA
CATGACGACAAGCGGGGCTTCCTTGAAAGAATCGAAGCGTGCGTGCGCGA
GAGTCAGGAGACTGTGTACGAGAACGAAGAAGGGTCTAGCTTGCGCTTCA
CCGAGCCCAAGCCCGCACATGACAAGCTCAGGGAGAAGATTTTGGGTACG
GATCAGCTAGCGAGGCCGTCGCCGTTGCCTGCAGGGGAACGAGAAGTGAA
ATTCGGTACGGCAGCAACAACGGGTGCTAAGAGAGGACCATCTGATGACC
AAGAACCGGAAGAAAACCAGGGTCGATGAGACAAGCTCAGGGAGAAGATT
TTGGGTACGGATCAGCTAGCGAGGCCGTCGCCGTTGCCTGCAGGGGAACG
AGAAGTGAAATTCGGTACGGCAGCAACAACGGGTGCTAAGAGAGGACCAT
CTGATGACCAAGAACCGGAAGAAAACCAGGGTCGATGA
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