mRNA_P-lacustris_contig976.16076.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig976.16076.1
Unique NamemRNA_P-lacustris_contig976.16076.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
[Close]
BLAST of mRNA_P-lacustris_contig976.16076.1 vs. uniprot
Match: D8LK52_ECTSI (Lactoylglutathione lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK52_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 2.700e-133
Identity = 174/193 (90.16%), Postives = 186/193 (96.37%), Query Frame = 1 
Query:  106 ANLAKIPGRPEGIDDAICHTPDPSTKDFIMQQTMLRIKNPHASLDFYTRILGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQPGAVELTHNWGTENDANLKYHSGNEEPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEVLGAEQMSEDFTKYTHGAESES 684
            A +A++ GRP+GIDDAIC+TPDPSTKDFIMQQTMLRIKNPH+SLDFYTR+LGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQ GAVELTHNWGTENDA LKYHSGNE+PRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIE+LGA+QMS+DF+KYT G ES S
Sbjct:    2 AKIAQMAGRPDGIDDAICNTPDPSTKDFIMQQTMLRIKNPHSSLDFYTRVLGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQAGAVELTHNWGTENDAALKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEILGADQMSKDFSKYTPGGESTS 194
[Close]
BLAST of mRNA_P-lacustris_contig976.16076.1 vs. uniprot
Match: A0A6H5KMV4_9PHAE (Lactoylglutathione lyase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV4_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 7.910e-127
Identity = 178/212 (83.96%), Postives = 189/212 (89.15%), Query Frame = 1 
Query:    1 ALPAATLIFGTAAFRPMHSV-SRSSGLVSNTSPLAKANLAKIP---GRPEGIDDAICHTPDPSTKDFIMQQTMLRIKNPHASLDFYTRILGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQPGAVELTHNWGTENDANLKYHSGNEEPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEVL 624
            ALPAATLIFG  AFRPMH+   R SGL SNT+PL    +AK+    GRP+GIDDAIC+TPDPSTKDFIMQQTMLRIKNPH SLDFYTR+LGMRLMQELHFAEWEFSIYFVGYCDPSEIP+DPKERTRWCFQQ GAVELTHNWGTENDA+LKYHSGNE+PRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIF   G S  +L
Sbjct:   11 ALPAATLIFGATAFRPMHTAFPRCSGLGSNTTPLPTVKMAKMAQMAGRPDGIDDAICNTPDPSTKDFIMQQTMLRIKNPHLSLDFYTRVLGMRLMQELHFAEWEFSIYFVGYCDPSEIPADPKERTRWCFQQAGAVELTHNWGTENDADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIF---GESRRIL 219
[Close]
BLAST of mRNA_P-lacustris_contig976.16076.1 vs. uniprot
Match: UPI001E1D4D5D (lactoylglutathione lyase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4D5D)

HSP 1 Score: 246 bits (627), Expect = 1.280e-79
Identity = 110/166 (66.27%), Postives = 127/166 (76.51%), Query Frame = 1 
Query:  157 CHTPDPSTKDFIMQQTMLRIKNPHASLDFYTRILGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQPGAVELTHNWGTENDANLKYHSGNEEPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEVLGAEQMSEDFT 654
            CH PD STKDFIMQQTM RIK+P  SL+FYT +LGMRL+Q   F   +FS+YF+GY    +IP D KER RW F +P  +ELTHNWGTE +    YH+GN +PRGFGHIG+ VPDVYKACERFEK  VKF KTPDGG MKGLAFI DPDGY IE+L A QM++D T
Sbjct:   15 CHEPDESTKDFIMQQTMYRIKDPKRSLEFYTNVLGMRLLQRFDFPAMKFSLYFMGYEKAEDIPEDNKERVRWTFSRPATIELTHNWGTEKEEGEPYHNGNSDPRGFGHIGLNVPDVYKACERFEKMDVKFIKTPDGGKMKGLAFIQDPDGYWIEILSANQMAQDMT 180
[Close]
BLAST of mRNA_P-lacustris_contig976.16076.1 vs. uniprot
Match: A0A7R9S0H7_9CRUS (Lactoylglutathione lyase (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9S0H7_9CRUS)

HSP 1 Score: 244 bits (623), Expect = 4.680e-79
Identity = 108/163 (66.26%), Postives = 129/163 (79.14%), Query Frame = 1 
Query:  157 CHTPDPSTKDFIMQQTMLRIKNPHASLDFYTRILGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQPGAVELTHNWGTENDANLKYHSGNEEPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEVLGAEQMSE 645
            CH  DPSTKDFI QQTM RIK+P ASL+FYT++LGM+LM++L F + +FS+YF+GY D S IPSDPK RT WCF QP  +ELTHNWGTENDA  +YH+GN EPRGFGHIG+ VPDV +AC+RFE+  VKF K P  G MKGLAFI DPDGY IE+  A  +S+
Sbjct:   22 CHESDPSTKDFIFQQTMFRIKDPKASLEFYTKVLGMKLMKKLDFPDMKFSLYFMGYVDKSTIPSDPKLRTEWCFSQPATLELTHNWGTENDAGCQYHNGNSEPRGFGHIGVMVPDVEQACQRFEQMNVKFVKRPADGKMKGLAFIQDPDGYWIEIFNATSVSQ 184
[Close]
BLAST of mRNA_P-lacustris_contig976.16076.1 vs. uniprot
Match: A0A1Y1I722_KLENI (Lactoylglutathione lyase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I722_KLENI)

HSP 1 Score: 243 bits (619), Expect = 2.380e-77
Identity = 115/191 (60.21%), Postives = 144/191 (75.39%), Query Frame = 1 
Query:   76 LVSNTSPLAKANLAKIPGRPEGIDDAICHTPDPSTKDFIMQQTMLRIKNPHASLDFYTRILGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQPGAVELTHNWGTENDANLK-YHSGNEEPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEVLGAEQMSE 645
            + S+ +PL  +  AK PG        +  T DP T+++IMQQTM RIK+P  SLDFYTR+LGMRL++   F   +FS+YFVGY DP EIP DP +R  W F+Q G VELTHNWGTE+D N K YH+GN +P+G+GHIG++VPDVYKACERFEK GV+F KTPDGG+MKGLAFI DPDGY IE+L AE +++
Sbjct:   83 MASSEAPLESS--AKTPG--------VADTVDPETQEYIMQQTMYRIKDPKVSLDFYTRVLGMRLLKRFDFPSAKFSLYFVGYADPKEIPDDPVQRGIWTFRQRGTVELTHNWGTESDPNFKGYHNGNTDPKGYGHIGLSVPDVYKACERFEKLGVEFVKTPDGGSMKGLAFIKDPDGYWIEILNAENITK 263
[Close]
BLAST of mRNA_P-lacustris_contig976.16076.1 vs. uniprot
Match: A0A6S7INW1_PARCT (Lactoylglutathione lyase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7INW1_PARCT)

HSP 1 Score: 238 bits (607), Expect = 8.730e-77
Identity = 109/160 (68.12%), Postives = 125/160 (78.12%), Query Frame = 1 
Query:  160 HTPDPSTKDFIMQQTMLRIKNPHASLDFYTRILGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQPGAVELTHNWGTENDANLKYHSGNEEPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEVLGAEQM 639
            H PD STKDFIMQQTMLRIK+P  SLDFYTR+LGMRL+ +  F   EFS+YFVGY    +IP +   RT+WCF + G +ELTHNWGTENDAN  YH+GN EP+GFGHIGI VPDV KACERFEK GVKF K P+ G MKGLAFI DPDGY IEVL ++ +
Sbjct:   13 HEPDVSTKDFIMQQTMLRIKDPKISLDFYTRVLGMRLLGKYDFPGMEFSLYFVGYEKAEDIPDEKDARTKWCFSRRGTIELTHNWGTENDANFNYHNGNSEPKGFGHIGIEVPDVDKACERFEKLGVKFVKKPNDGKMKGLAFIQDPDGYWIEVLNSDNL 172
[Close]
BLAST of mRNA_P-lacustris_contig976.16076.1 vs. uniprot
Match: H2ZYK6_LATCH (Lactoylglutathione lyase n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H2ZYK6_LATCH)

HSP 1 Score: 236 bits (603), Expect = 4.780e-76
Identity = 105/181 (58.01%), Postives = 135/181 (74.59%), Query Frame = 1 
Query:   97 LAKANLAKIPGRPEGIDDAICHTPDPSTKDFIMQQTMLRIKNPHASLDFYTRILGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQPGAVELTHNWGTENDANLKYHSGNEEPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEVLGAEQM 639
            +++A   ++ G  + +   +C  PDPSTKDF+MQQTMLR+K+P  SL+FYT++LGM  +Q+  F   +FS+YF+GY D +EIP+D KERT W F +  A+ELTHNWGTEN+A   YH+GN +PRGFGHIGI VPDVY AC+RFE+ GV+F K PD G MKGLAFI DPDGY IE+L    M
Sbjct:    1 MSEAQPTELSGLTDEVAYGVCCDPDPSTKDFMMQQTMLRVKDPKKSLEFYTKVLGMTFLQKFDFPSMKFSLYFLGYEDKTEIPADMKERTAWTFSRMAAIELTHNWGTENEAGQAYHNGNSDPRGFGHIGIAVPDVYAACKRFEELGVQFVKKPDDGKMKGLAFIQDPDGYWIEILSPNNM 181
[Close]
BLAST of mRNA_P-lacustris_contig976.16076.1 vs. uniprot
Match: A0A7L0FFD8_CORCN (Lactoylglutathione lyase (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L0FFD8_CORCN)

HSP 1 Score: 236 bits (603), Expect = 5.110e-76
Identity = 108/176 (61.36%), Postives = 127/176 (72.16%), Query Frame = 1 
Query:  124 PGRPEGIDD----AICHTPDPSTKDFIMQQTMLRIKNPHASLDFYTRILGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQPGAVELTHNWGTENDANLKYHSGNEEPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEVLGAEQM 639
            P    G+ D      C  PD STKDF+ QQTMLR+K+P  SLDFYTR+LGM L+Q+  F   +FS+YF+GY D ++IP D KERT W F +   +ELTHNWGTEND N  YHSGN +PRGFGHIGI VPDVYKAC+RFE+ GVKF K PD G MKGLAF+ DPDGY IE+L    M
Sbjct:    9 PAEVRGLSDEAAYGACSEPDASTKDFLFQQTMLRVKDPKKSLDFYTRVLGMTLLQKFDFPTMKFSLYFLGYEDKNDIPKDDKERTAWTFSRKATLELTHNWGTENDENQSYHSGNSDPRGFGHIGIAVPDVYKACKRFEELGVKFVKKPDDGKMKGLAFVQDPDGYWIEILNPNHM 184
[Close]
BLAST of mRNA_P-lacustris_contig976.16076.1 vs. uniprot
Match: UPI001CF93549 (lactoylglutathione lyase n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF93549)

HSP 1 Score: 236 bits (601), Expect = 9.300e-76
Identity = 108/161 (67.08%), Postives = 122/161 (75.78%), Query Frame = 1 
Query:  157 CHTPDPSTKDFIMQQTMLRIKNPHASLDFYTRILGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQPGAVELTHNWGTENDANLKYHSGNEEPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEVLGAEQM 639
            C  PDPSTKDF+MQQTMLRIK+P  SLDFYTRILGM L+Q+  F   +FS+YF+ Y D  EIP+D KER  W F +   +ELTHNWGTEND N  YHSGN +PRGFGHIGI VPDVY AC+RFE+ GVKF K PD G MKGLAFI DPDGY IE+L    M
Sbjct:   20 CTDPDPSTKDFMMQQTMLRIKDPKKSLDFYTRILGMTLLQKFDFPAMKFSLYFLAYEDKKEIPADCKERAAWTFSRKATIELTHNWGTENDENQSYHSGNSDPRGFGHIGIAVPDVYAACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILSPNNM 180
[Close]
BLAST of mRNA_P-lacustris_contig976.16076.1 vs. uniprot
Match: A0A7S3XDD3_9CHLO (Lactoylglutathione lyase n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XDD3_9CHLO)

HSP 1 Score: 236 bits (603), Expect = 1.380e-75
Identity = 103/161 (63.98%), Postives = 128/161 (79.50%), Query Frame = 1 
Query:  154 ICHTPDPSTKDFIMQQTMLRIKNPHASLDFYTRILGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQPGAVELTHNWGTENDANLK-YHSGNEEPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEVLGAE 633
            +CH PD STKDF+ QQTM RIK+P  SLDFYTRILGM L+++L F + +FS+YF+GYC+  +IP +P +RT W F+QP  +ELTHNWGTE D+N   YHSGN +P+G+GHIG +VPDVY ACERFEK GV+F K PD G MKGLAF+ DPDGY IE+L A+
Sbjct:   52 VCHEPDASTKDFVFQQTMYRIKDPKVSLDFYTRILGMTLLKKLDFPDMKFSLYFLGYCNAKDIPENPADRTEWMFKQPACLELTHNWGTEEDSNFGGYHSGNADPKGYGHIGFSVPDVYSACERFEKLGVEFVKRPDDGKMKGLAFVKDPDGYWIEILNAK 212
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig976.16076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK52_ECTSI2.700e-13390.16Lactoylglutathione lyase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KMV4_9PHAE7.910e-12783.96Lactoylglutathione lyase n=1 Tax=Ectocarpus sp. CC... [more]
UPI001E1D4D5D1.280e-7966.27lactoylglutathione lyase-like n=1 Tax=Mercenaria m... [more]
A0A7R9S0H7_9CRUS4.680e-7966.26Lactoylglutathione lyase (Fragment) n=1 Tax=Argulu... [more]
A0A1Y1I722_KLENI2.380e-7760.21Lactoylglutathione lyase n=1 Tax=Klebsormidium nit... [more]
A0A6S7INW1_PARCT8.730e-7768.13Lactoylglutathione lyase n=1 Tax=Paramuricea clava... [more]
H2ZYK6_LATCH4.780e-7658.01Lactoylglutathione lyase n=1 Tax=Latimeria chalumn... [more]
A0A7L0FFD8_CORCN5.110e-7661.36Lactoylglutathione lyase (Fragment) n=3 Tax=Neogna... [more]
UPI001CF935499.300e-7667.08lactoylglutathione lyase n=1 Tax=Protopterus annec... [more]
A0A7S3XDD3_9CHLO1.380e-7563.98Lactoylglutathione lyase n=1 Tax=Picocystis salina... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig976contigP-lacustris_contig976:50094..53671 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score383.6
Seed ortholog evalue6.3e-104
Seed eggNOG ortholog2880.D8LK52
Preferred nameGLO1
KEGG rclassRC00004,RC00740
KEGG koko:K01759,ko:K16803,ko:K21768
KEGG ReactionR02530
KEGG Pathwayko00620,map00620
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006089,GO:0006090,GO:0006355,GO:0006357,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009414,GO:0009415,GO:0009438,GO:0009628,GO:0009636,GO:0009651,GO:0009889,GO:0009987,GO:0010035,GO:0010468,GO:0010556,GO:0010941,GO:0016020,GO:0016829,GO:0016846,GO:0019219,GO:0019222,GO:0019243,GO:0019752,GO:0019904,GO:0030097,GO:0030099,GO:0030154,GO:0030316,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0032787,GO:0033554,GO:0034641,GO:0042180,GO:0042182,GO:0042221,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051186,GO:0051252,GO:0051596,GO:0051716,GO:0060255,GO:0060548,GO:0061727,GO:0065007,GO:0070887,GO:0071214,GO:0071470,GO:0071704,GO:0071944,GO:0080090,GO:0097237,GO:0098754,GO:0104004,GO:1901564,GO:1901575,GO:1901615,GO:1901700,GO:1903506,GO:1990748,GO:2000112,GO:2001141
EggNOG free text desc.lactoylglutathione lyase activity
EggNOG OGsCOG0346@1,KOG2944@2759
EC4.4.1.5
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko04812
Exons6
Model size696
Cds size696
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig976.16076.1prot_P-lacustris_contig976.16076.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig976 50094..53671 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817406.8102617-CDS-P-lacustris_contig976:50093..501941622817406.8102617-CDS-P-lacustris_contig976:50093..50194Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 50094..50194 -
1693495043.8940394-CDS-P-lacustris_contig976:50093..501941693495043.8940394-CDS-P-lacustris_contig976:50093..50194Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 50094..50194 -
1622817406.8212163-CDS-P-lacustris_contig976:50467..506781622817406.8212163-CDS-P-lacustris_contig976:50467..50678Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 50468..50678 -
1693495043.9068-CDS-P-lacustris_contig976:50467..506781693495043.9068-CDS-P-lacustris_contig976:50467..50678Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 50468..50678 -
1622817406.8336408-CDS-P-lacustris_contig976:51534..516521622817406.8336408-CDS-P-lacustris_contig976:51534..51652Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 51535..51652 -
1693495043.9196613-CDS-P-lacustris_contig976:51534..516521693495043.9196613-CDS-P-lacustris_contig976:51534..51652Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 51535..51652 -
1622817406.8443496-CDS-P-lacustris_contig976:52011..520651622817406.8443496-CDS-P-lacustris_contig976:52011..52065Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 52012..52065 -
1693495043.9391136-CDS-P-lacustris_contig976:52011..520651693495043.9391136-CDS-P-lacustris_contig976:52011..52065Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 52012..52065 -
1622817406.8546026-CDS-P-lacustris_contig976:52450..525241622817406.8546026-CDS-P-lacustris_contig976:52450..52524Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 52451..52524 -
1693495043.9506178-CDS-P-lacustris_contig976:52450..525241693495043.9506178-CDS-P-lacustris_contig976:52450..52524Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 52451..52524 -
1622817406.8650324-CDS-P-lacustris_contig976:53533..536711622817406.8650324-CDS-P-lacustris_contig976:53533..53671Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 53534..53671 -
1693495043.961355-CDS-P-lacustris_contig976:53533..536711693495043.961355-CDS-P-lacustris_contig976:53533..53671Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig976 53534..53671 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig976.16076.1

>prot_P-lacustris_contig976.16076.1 ID=prot_P-lacustris_contig976.16076.1|Name=mRNA_P-lacustris_contig976.16076.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=232bp
ALPAATLIFGTAAFRPMHSVSRSSGLVSNTSPLAKANLAKIPGRPEGIDD
AICHTPDPSTKDFIMQQTMLRIKNPHASLDFYTRILGMRLMQELHFAEWE
FSIYFVGYCDPSEIPSDPKERTRWCFQQPGAVELTHNWGTENDANLKYHS
GNEEPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDP
DGYSIEVLGAEQMSEDFTKYTHGAESESPSA*
back to top

mRNA from alignment at P-lacustris_contig976:50094..53671-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig976.16076.1 ID=mRNA_P-lacustris_contig976.16076.1|Name=mRNA_P-lacustris_contig976.16076.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=3578bp|location=Sequence derived from alignment at P-lacustris_contig976:50094..53671- (Pleurocladia lacustris SAG_25_93)
GCCCTTCCAGCCGCAACACTGATATTCGGAACAGCCGCCTTTCGGCCAAT
GCATTCAGTTTCGCGCTCTTCTGGGCTTGTTTCCAACACTTCCCCGCTGG
CGAAGGCTAATCTGGCGAAGATACCAGGGCGACCCGAAGTAAGGGATGTT
GGGGTGAAAACCCGAGAACGAAAGTTGCGTCTTCATTGCTTGTTGACTTT
TTTGTAGGCCACTCTATACTACCTCTCTTGATATCTCACTGGGGACGTGA
ACGAAATTCAAGTGAGTAGCAGACAAGAAGCAACGCTGTTCGTAGGCCGC
CACTCGTCCGTAGTAGCTCATTCTGACCTGTGTACCCTGACCCGGCGAGT
AGTTTATCGGAGATGAGCCTCTTCCATTGCCCATTTTCCCTCCGGCAATA
GTCTAATGGTCTGCTCCAAACACACGACATCAATACACGACTTTCTTCTG
GTAGCATGTGGTGCGTTGCAGAGGATGTTCAGCAGTAGAATTATGAGCAT
TGGAGATCGGGGTACACGTACAAGTTTGGTGGTCGGGCTGTAAGTTTGTT
CGAGGGGGCCCCAAGGGATGACCATGGCTTGGAGTTCGGTGCGTCCTTGA
CAGCGAAGAAATCCTACGGGACGCCACGTACATTCGCAGCTACAAATTCA
AGTCATAGGCCTAGTATTTCATGCGCACCGGCTTTGATATCCTTTATGGA
TATGGCTGGCAGCAATTTCTCAGAACAAGCCTTGAACGTGTCGAGATATC
GAGCTGTCATAGGGCATGTGTGCACACCCGCCAATTGAGGAAAAATAGTG
CAGTTGGGGAAGCGAGAGAGGCGGTTCAGTTGAAGCTAGCTCCTCGCAAG
CGAACGTAGCCCACGAAAACTGGGCCACTCTACTTGTGCGCTGCGTGAGA
GTCGGATCGTGTTTTCGTAATTTTGCAACGGCAAGGGAACAGGCCAATCA
AGCGGCGTTCGGGGGTCTGGTTCGATTGCTTGACACTCTCGCACCCCTCG
GGTATAGCCTCAATGCATATGAAGAAGCAAACAAATTCCACACGAATGCT
CGTTGGATTCTTTTTGCTGGTATACCTGCATATCCGGAAAGCAGCACTAA
ACGGCGGCCTTACCCAGTAACTTGTTCCATCCTGAACTTTTCTCCAGGGC
ATTGATGATGCTATCTGCCACACGCCTGACCCTTCTACCAAGGATTTCAT
CATGCAACAGACCATGTTGAGGTAGGCGTTCGAGACCTTTTTTTTTTTTT
CACTTATTGGAAAGCAACTAGATAGACCTTGATGAATTCCATCTTGGTTC
TCGAAATGAGGTGCTTGTGTCGGTATTTTAAAGCGAGCTTGTTTGAAATC
GATTTTTAAGGTGGTAACGACTTGTTCGAAATTTGAAACTTCAAAGTGAG
ACAGGTTTCAACTCAGGACTTGGGATCGTTGTTGTCGCCTGCCTTTCACA
CATGTTGTAATATTTCGCTGCGCGGGGGCAAGGATGGAGCAGCGCCGTGT
GCTCAGCGCTTTGCAAACTGGCTGCCCCTGTACGCCGCCGCGTGTTTTTC
TTATCAGCGTCGTGACAAGACCATGCTCATTTGTGTACCCCCTCTTTCAA
TTTCAGGATCAAAAATCCCCACGCGAGTCTTGACTTCTACACGAGGATTC
TCGGAATGAGGTAACTCGATGCGTTGGCAGATAGCTCCTGTAGTACATCT
ACTGTTTCTGCGTACATCGTGCATGGCAAGCGTTCAAAGTGTCGCACACG
TCGTTTTTTTGCGTCGTATTAACTAATTCGTTAGTCAGCAACGAAGCAAC
AATACACACGTCGCCTCATGCTTAGCAGTATTGTAACAACCCCAGCAGTA
TTGCTCCGTGGAGCGGTATTGAATGTTCAAACGCTTGATACCTATTTCAG
TGCTGCGGGCCGCGAGCGCAAGAAATGTGCACTGCCAAATGTAGGTTGTG
GCTAGGAGGGATCGAAGTCGAGTTGGTAGATTTTCACGAAGATCCTGTCC
GCGCACGTCACCTTGTCAGGCTGATGCAAGAGTTGCATTTCGCAGAATGG
GAGTTCAGCATCTACTTCGTTGGGTACTGTGACCCGTCCGAAATTCCCTC
TGACCCAAAGGAACGTACAAGGTGGTGTTTCCAGCAGGTATTTTCGCTCT
CCTGCTTGGCACAGGAGATACCGTAAAAGTGCTGAAGTTGGCAGCGATCG
CATTTTGGAATAGTTTATTTCTTGTTTTCTTTGCGCACCCCCCGGTGCCA
TAACCCCGATGGGTGCTATAGCCCCGATACCGGTGCGCAAATCGAATCAA
ATAAATTATTTCTAGCCTTTTCAAGGCCCCCCAGTGCGATGACTCCGATG
GGTGCGGTACTGAATAACACCACACGGATTTGGTTTCCTGCCGGGAGTTA
TCTGTATCGGTTTGTCTTCCATGATATTGGCTGGTGTCCTTCCTTCCCTC
CATCGTTTTCGTCCTCCGCAGAGAGTACCAGTACGTACGGTGGTTGTGCC
ATATGCGTTGGGTTGCGGGTTTGAACGCATACAATATCCCTACCAATCTT
TTCGACGCGTGAACCGCGACGGTGAAATTACACATACAAGAAGCGCCCCG
ATGATACCTCACCTCTTTCAAAAAGTACAATTGCACCCTCGATACAGCTA
CAGAGAGGGGCCCGAGGCAACTACGATAGTATGCAATCTTGGATTTATAT
CGGGGTTACCGCACCGGTGCGGTAGCTCCGATACCGGTGCGGAAATCGAA
TTAAATAATGTTTTTCTTATTTTTTCTCGCGCAACCCGGTGCCATATCCG
CGATAGGTAGATACGAACTTGAGCACTTTTACGGTAAAACTTATTCCATG
TACCGCAGCTAAGCTCTTGTACTCATCTGTGCTAGAACAGGAGCCCAAGG
TGACCTGTACAAGTTGCTTCTGCGCGTGTCGCTGACTTACTCGGCGCACG
TTCTCTCCCTCCGCTCCTGCTCCAAACTTGCTCTCGCCGTCAGCCCGGTG
CGGTCGAGTTGACGCACAATTGGGGCACGGAGAACGACGCCAACCTCAAA
TACCACTCAGGCAACGAAGAACCTAGAGGATTTGGACACATCGGCATTAC
TGTGCCTGACGTTTACAAGGCGTGCGAAAGGTTCGAGAAGGAGGGAGTGA
AGTTCCGCAAGACACCTGATGGAGGCAATATGAAAGGCCTAGCATTTATT
TTCGGTGAGTTGGATTCGTAAACGCAGAAAAATAAATATTGCCCCTAGTT
GTACCCGAGAAGACCCACCAAAATTTTCTGCGATCGGCAAAAGCTGCAAG
CTTGGCGAAATCTATTCTTTTTTGGAAATTTTCGGGCGCATAGTGTTGAA
CTCCTCTCCCGTCCCTGACTTTCGTTCGGCAACGCTCTATGCGAACTTTC
GCGAAACTACATGTACCTGTAACTCGCTTTCTTTCTATTTTTGTTCATTT
TCTTCGCTGCCCATTCTTGAAACGCAGACCCCGACGGTTACTCCATTGAA
GTTCTTGGGGCGGAACAGATGAGCGAAGACTTCACGAAGTACACCCATGG
AGCAGAATCAGAATCTCCAAGCGCTTAG
back to top

Coding sequence (CDS) from alignment at P-lacustris_contig976:50094..53671-

>mRNA_P-lacustris_contig976.16076.1 ID=mRNA_P-lacustris_contig976.16076.1|Name=mRNA_P-lacustris_contig976.16076.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1392bp|location=Sequence derived from alignment at P-lacustris_contig976:50094..53671- (Pleurocladia lacustris SAG_25_93)
GCCCTTCCAGCCGCAACACTGATATTCGGAACAGCCGCCTTTCGGCCAAT
GCATTCAGTTTCGCGCTCTTCTGGGCTTGTTTCCAACACTTCCCCGCTGG
CGAAGGCTAATCTGGCGAAGATACCAGGGCGACCCGAAGCCCTTCCAGCC
GCAACACTGATATTCGGAACAGCCGCCTTTCGGCCAATGCATTCAGTTTC
GCGCTCTTCTGGGCTTGTTTCCAACACTTCCCCGCTGGCGAAGGCTAATC
TGGCGAAGATACCAGGGCGACCCGAAGGCATTGATGATGCTATCTGCCAC
ACGCCTGACCCTTCTACCAAGGATTTCATCATGCAACAGACCATGTTGAG
GGCATTGATGATGCTATCTGCCACACGCCTGACCCTTCTACCAAGGATTT
CATCATGCAACAGACCATGTTGAGGATCAAAAATCCCCACGCGAGTCTTG
ACTTCTACACGAGGATTCTCGGAATGAGGATCAAAAATCCCCACGCGAGT
CTTGACTTCTACACGAGGATTCTCGGAATGAGGCTGATGCAAGAGTTGCA
TTTCGCAGAATGGGAGTTCAGCATCTACTTCGTTGGGTACTGTGACCCGT
CCGAAATTCCCTCTGACCCAAAGGAACGTACAAGGTGGTGTTTCCAGCAG
GCTGATGCAAGAGTTGCATTTCGCAGAATGGGAGTTCAGCATCTACTTCG
TTGGGTACTGTGACCCGTCCGAAATTCCCTCTGACCCAAAGGAACGTACA
AGGTGGTGTTTCCAGCAGCCCGGTGCGGTCGAGTTGACGCACAATTGGGG
CACGGAGAACGACGCCAACCTCAAATACCACTCAGGCAACGAAGAACCTA
GAGGATTTGGACACATCGGCATTACTGTGCCTGACGTTTACAAGGCGTGC
GAAAGGTTCGAGAAGGAGGGAGTGAAGTTCCGCAAGACACCTGATGGAGG
CAATATGAAAGGCCTAGCATTTATTTTCGCCCGGTGCGGTCGAGTTGACG
CACAATTGGGGCACGGAGAACGACGCCAACCTCAAATACCACTCAGGCAA
CGAAGAACCTAGAGGATTTGGACACATCGGCATTACTGTGCCTGACGTTT
ACAAGGCGTGCGAAAGGTTCGAGAAGGAGGGAGTGAAGTTCCGCAAGACA
CCTGATGGAGGCAATATGAAAGGCCTAGCATTTATTTTCGACCCCGACGG
TTACTCCATTGAAGTTCTTGGGGCGGAACAGATGAGCGAAGACTTCACGA
AGTACACCCATGGAGCAGAATCAGAATCTCCAAGCGCTTAGACCCCGACG
GTTACTCCATTGAAGTTCTTGGGGCGGAACAGATGAGCGAAGACTTCACG
AAGTACACCCATGGAGCAGAATCAGAATCTCCAAGCGCTTAG
back to top