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Homology
BLAST of mRNA_P-lacustris_contig961.15970.1 vs. uniprot
Match: D8LBR3_ECTSI (Sas10 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR3_ECTSI) HSP 1 Score: 611 bits (1576), Expect = 9.670e-202 Identity = 490/666 (73.57%), Postives = 511/666 (76.73%), Query Frame = 1
Query: 73 MAPPRGRGGR------------RGTGRGXXXXXXXXXTRRSRTAPESNPENEELYTDVDRFHMQKDNIKFGGGAGDSS-DSDDLDGSEEEEGVMDLEGAXXXXXXXXXXXXXEDD-SDGSDLPELPEHVRRAAMGASSDXXXXXXXXXXQGGGKFSAG-WGKSRSSYYNADTADLEIGQEFEDAEAEEEAARELQRASYKRLDPADYGEE---GEGRGEEAIHMGKQEGEGARLKGKGKTSAKRRRGEEANTTTSGQGAALLAMRSDLEQIALGEGGEVETSVFKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVTSEIGASKDGLVYLRTRQQLLLAYCMNVCFYMILKAKGEPAKGHPVVRRLLSLRALLEDMSILDDKMSSQVDLLLRALRSGIDLAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGLEEEEARFMXXXXXXXXXXXXXXXXXXXXXXXXSKSAXXXXXXAAREKALVEARAKLAAGG-GNDDGSLGDFGDEDVDESTAMNGSGGGNLLQGMVNRISQRGQSTTARKGRGLQGDLDVPVRERDQTIRVRRPAPGDKSDSEEGGAGGDGSGTDCEDXXXXXXXXXXFMDGLPPGLLEGLGR 2013
MAPPRGRGGR RG+ G R+ + PE NPENEELYTDVDRFHMQ+D IKFGG AGDSS DSDDLDGSEEEEGVM L+G XXXXXXXXXXXXX SD S+LPELPEHVRRAAM ASSD XXXXXXXXX KF AG WGK+RSSYYNADTADLEIGQEFEDAEAEEEAA ELQRASYKRLDPADYGEE KQE G KGKG T+AKRR + ++ QG AL AM+SDLEQIALG GGEVETSV KRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVT+EIGASKDGLVYLRTRQQLLLAYCMNVCFYM+LKAKGEPAKGHPVVRRLLSLR LLEDMS LDDKMSSQVDLLLRALRSG+DLAG XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX REKA+ EARAKLAAG G D LGDFGDED+DE +AM GSGGGN+LQGMVNRISQR Q+ TARKGRGLQGDLDVPVRERDQTIRVRRPAPG+ SD EEGG G XXXXXXXXX FMDGLPPGLLEGL R
Sbjct: 1 MAPPRGRGGRGXXXXXXXXXXXRGSEGG-----------RASSRPEGNPENEELYTDVDRFHMQQDKIKFGGRAGDSSSDSDDLDGSEEEEGVMTLDGXXXXXXXXXXXXXXXXXXSDASELPELPEHVRRAAMQASSDDXXXXXXXXXXXXXKFGAGGWGKNRSSYYNADTADLEIGQEFEDAEAEEEAALELQRASYKRLDPADYGEEEXXXXXXXXXXXXXXKQERGG---KGKGNTAAKRRERDGTSSAAGAQGEALRAMKSDLEQIALGAGGEVETSVVKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVTAEIGASKDGLVYLRTRQQLLLAYCMNVCFYMVLKAKGEPAKGHPVVRRLLSLRGLLEDMSSLDDKMSSQVDLLLRALRSGVDLAGGSDNEEGXXXXXXXXXXXXXXXVSAANGRGKTRVAANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------REKAVEEARAKLAAGADGAGDALLGDFGDEDMDERSAMRGSGGGNMLQGMVNRISQRDQAATARKGRGLQGDLDVPVRERDQTIRVRRPAPGEDSDVEEGG------GVXXXXXXXXXXXXXGFMDGLPPGLLEGLSR 636
BLAST of mRNA_P-lacustris_contig961.15970.1 vs. uniprot
Match: A0A6H5KFL1_9PHAE (Sas10 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL1_9PHAE) HSP 1 Score: 476 bits (1226), Expect = 2.480e-151 Identity = 372/504 (73.81%), Postives = 387/504 (76.79%), Query Frame = 1
Query: 514 SRSSYYNADTADLEIGQEFEDAEAEEEAARELQRASYKRLDPADYGEE--GEGRGEEAIHMGKQEGEGARLKGKGK-TSAKRRRGEEANTTTSGQGAALLAMRSDLEQIALGEGGEVETSVFKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVTSEIGASKDGLVYLRTRQQLLLAYCMNVCFYMILKAKGEPAKGHPVVRRLLSLRALLEDMSILDDKMSSQVDLLLRALRSGIDLAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGLEEEEARFMXXXXXXXXXXXXXXXXXXXXXXXXSKSAXXXXXXAAREKALVEARAKLAAGG-GNDDGSLGDFGDEDVDESTAMNGSGGGNLLQGMVNRISQRGQSTTARKGRGLQGDLDVPVRERDQTIRVRRPAPGDKSDSEEGGAGGDGSGTDCEDXXXXXXXXXXFMDGLPPGLLEGLGR 2013
+RSSYYNADTADLEIGQEFEDAEAEEEAA ELQRASYKRLDPADYGEE KQE T+AKR ++ QG AL AM+SDLEQIALG GGEVETSV KRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVT+EIGASKDGLVYLRTRQQLLLAYCMNVCFYM+LKAKGEPAKGHPVVRRLLSLR LLEDMS LDDKMSSQVDLLLRALRSG+DLAG XXXXXXXXXXXXXXX XXXXXXXXXXXXXX EEGLE XXXXXXXXXXXXXXXXXXXXXXXX XXXXX ARE A+ EARAKLAAG G D LGDFGDED+DE +AM GSGGGN+LQGMVNRISQR Q+ TARKGRGLQGDLDVPVRERDQTIRVRRPAPG+ S+ EEG XXXXXXXXXXFMDGLPPGLLEGL R
Sbjct: 45 TRSSYYNADTADLEIGQEFEDAEAEEEAALELQRASYKRLDPADYGEEEXXXXXXXXXXXTAKQEXXXXXXXXXXXXTTAKRXXXXGTSSAAGAQGEALRAMKSDLEQIALGAGGEVETSVVKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVTAEIGASKDGLVYLRTRQQLLLAYCMNVCFYMVLKAKGEPAKGHPVVRRLLSLRGLLEDMSSLDDKMSSQVDLLLRALRSGVDLAGGSDNXXXXXXXXXXXXXXXGVSAANGRGKTRVAANXXXXXXXXXXXXXXVD-----------EEGLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ARENAVEEARAKLAAGADGTSDALLGDFGDEDMDERSAMRGSGGGNMLQGMVNRISQRAQAATARKGRGLQGDLDVPVRERDQTIRVRRPAPGEDSNVEEGXX------XXXXXXXXXXXXXXXFMDGLPPGLLEGLSR 529
BLAST of mRNA_P-lacustris_contig961.15970.1 vs. uniprot
Match: A0A1Y1INM2_KLENI (Sas10/Utp3/C1D family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INM2_KLENI) HSP 1 Score: 130 bits (327), Expect = 3.090e-27 Identity = 84/252 (33.33%), Postives = 124/252 (49.21%), Query Frame = 1
Query: 505 WGKSRSSYYNADTADLEIGQEFEDAEAEEEAARELQRASYKRLDPADYGEEGEGRGEEAIHMGKQEGEGARLKGKGKTSAKRRRGEEANTTTSGQGAALLAMRSDLEQIALGEGGE---VETSVFKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVTSEIGASKDGLVYLRTRQQLLLAYCMNVCFYMILKAKGEPAKGHPVVRRLLSLRALLEDMSILDDKMSSQVDLLLRALR 1251
WGKS+ YY D DLE+ + E E QR + L P DY +E E +E++ T G L ++ + + +G + V K+D L+R +KL V+SEAPEL +LLGE+R L +TE VQP++ V A++DG+ YL + LLL YC N+ FY++LKA+G P + HPV+ R++ LR LE + +D K+ Q+D LL A +
Sbjct: 165 WGKSKKVYYGGDNVDLELTDDEEAPAEXXXMVLEQQRKLAQSLRPEDYDQESE--------------------------------DESDKETPDAGEETLEAAANRAENGVKKGVKENGVTVEEVKKDLDSLTREEKLAAVMSEAPELVSLLGELREGLREITEKVQPVLRAVKDGKYATQDGISYLEAKHLLLLTYCQNIVFYLLLKAEGRPVQDHPVITRMVELRLFLEKIRPIDKKLQYQIDKLLAAAK 384
BLAST of mRNA_P-lacustris_contig961.15970.1 vs. uniprot
Match: A0A0D2VUV2_CAPO3 (Sas10 domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VUV2_CAPO3) HSP 1 Score: 128 bits (322), Expect = 1.250e-26 Identity = 84/256 (32.81%), Postives = 131/256 (51.17%), Query Frame = 1
Query: 502 GWGKSRSSYYNADTADLEIGQEFEDAEAEE----EAARELQRASYKRLDPADYGEEGEGRGEEAIHMGKQEGEGARLKGKGKTSAKRRRGEEANTTTSGQGAALLAMRSDLEQIALGEGGEVETSVFKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVTSEIGASKDGLVYLRTRQQLLLAYCMNVCFYMILKAKGEPAKGHPVVRRLLSLRALLEDMSILDDKMSSQVDLLLRALRSG 1257
GWG R YYNAD A+ + EA R LQR LD E+A+ + G AR + G T+A ++ +A+ A + + L G +V RD SKLS+ +KLEL++ ++PEL LL + + ++GT+ +QPL+ A+ G+ YL + +LL+YC+++CFY++LKA+G+P K HPV+ L+ LR LE + LD K+ Q+D L++A +G
Sbjct: 174 GWGSKRRDYYNADDAEEQXXXXXXXXXXXXXXXXEALR-LQRQQAALLD------------EDAMDVDDSLGARARQQASGATTASSKKPLKASA----------ASKKAADSALLASGEDVAIEAVARDISKLSQTEKLELIVKDSPELLELLSDFKLKIGTVVSQIQPLIEKTRRGEFATSSGVSYLEVKLHILLSYCIDICFYLLLKAEGKPVKDHPVIEHLVHLRTTLERLRPLDSKLKYQIDKLVKAAATG 406
BLAST of mRNA_P-lacustris_contig961.15970.1 vs. uniprot
Match: A0A7S3UFC2_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UFC2_9CHLO) HSP 1 Score: 126 bits (317), Expect = 3.970e-26 Identity = 123/375 (32.80%), Postives = 184/375 (49.07%), Query Frame = 1
Query: 190 EELYTDVDRFHMQKDNIKFGGGAGDSSDSDDLDGSEEEEGVMDL----EGAXXXXXXXXXXXXXEDDSDGSDLP---------ELPEHVRRAAMGASSDXXXXXXXXXXQGGGKFSAGWGKSRSSYYNADTADLEIGQEFEDAEAEEEAARELQRASYKRLDPADYGEEGEGRGEEAIHMGKQEGEGARLKGKGKTSAKRRRGEEANTTTSGQGAALLAMRSDLEQIALGEGGEVETSVFKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVTSEIGASKDGLVYLRTRQQLLLAYCMNVCFYMILKAKGEPAKGHPVVRRLLSLRALLEDMSILDDKMSSQVDLLLRALRSGIDLAGA 1275
EE+ DVD+FH Q+D + SD D+ + S++ E VM L E XXXXXXXXX EDDS + + + V R G S + XXXXXX + WGK + YY AD D+E+ + E + A +QR L P D+ E +G +S EE T GQ A + R +Q G +E +D S ++ +KL +V+S+APEL LLG++R L + E +QP++ V A+++G+ YL + L+L+YC N+ FY++LK++G+ + HPV++RL+ +RA LE + +D KM Q+D LL+ S DL+ A
Sbjct: 19 EEMQDDVDKFHQQRDYVPL------ESDGDE-ESSDDGEEVMGLSSGEEEVDSEXXXXXXXXXEEDDSPDTSKSMQKLLRAERAMRDKVLREQAGLSDEESXXXXXXPE------ARDWGKGKGLYYGADNQDIELTDDEEAPQXXXXEALRIQRERAALLRPEDFEAE-----------------------EGSSS------EEDEPLTLGQKVAANSRRKQGKQT----NGHIEQETIVKDKSGMTEDEKLSIVMSDAPELVGLLGDLRKGLEQVRERIQPVIEKVKVGALATREGMSYLEAKNLLMLSYCTNIVFYLLLKSEGKSVRDHPVMQRLVQIRAYLEKIRPIDKKMQYQIDKLLKL--SSTDLSKA 345
BLAST of mRNA_P-lacustris_contig961.15970.1 vs. uniprot
Match: A0A7R9U4P2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4P2_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.260e-25 Identity = 65/117 (55.56%), Postives = 84/117 (71.79%), Query Frame = 2
Query: 2138 DFYDAVAKEKERKKRAKKEKYHPQARIAGALEAELEAERAAKGETKRGASYTIIKNRGLTPHKNKLNRNPRSKKREAFRKATIRRKGQVRDIRTGEADAYGGESTGIKSNVTRSRKL 2488
DF + +EKER+++AK +KY + R E +GE KRGA+Y IIKNRGLTPHK+K+NRNPR KKRE +R+A +RRKGQVR +R GEAD YGGE +GI + V+RSR+L
Sbjct: 29 DFMQLIMQEKERQRKAKADKYRVKKRKRD--------EGLEEGE-KRGATYQIIKNRGLTPHKSKMNRNPRVKKREQYRRALLRRKGQVRAVREGEADDYGGEKSGINARVSRSRRL 136
BLAST of mRNA_P-lacustris_contig961.15970.1 vs. uniprot
Match: D8U8A8_VOLCA (Sas10 domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8A8_VOLCA) HSP 1 Score: 122 bits (307), Expect = 9.730e-25 Identity = 83/248 (33.47%), Postives = 135/248 (54.44%), Query Frame = 1
Query: 505 WGKSRSSYYNADTADLEIGQEFEDAEAEEEAARELQRASYKRLDPADYGEEGEGRGEEAIHMGKQEGEGARLKGKGKTSAKRRRGEEANTTTSGQGAALLAMRSDLEQIALGEG-GEVETSVFKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVTSEIGASKDGLVYLRTRQQLLLAYCMNVCFYMILKAKGEPAKGHPVVRRLLSLRALLEDMSILDDKMSSQVDLLLRA 1245
WG S+ +YY+ADTA E G + E + EE+ A LQRA +L AD+G E + + HM + + GEE T G AA A + ++ G+ G+VE RD S L ++ ++++APEL +LL +++ L + V P+++ + + +GL YL + LLL+YC+++ FY+++KA+G P + HPV+ RL+ LRA LE + +D ++S Q+D LL+A
Sbjct: 149 WGASKRAYYDADTA--EAGSDEEALKEEEQEALALQRARAAKLAAADFGLEDQ----DEDHMEETD-----------------EGEEDEGPTMGGLAAARAAAVEGGKMGSGKRQGQVEVEAVARDLSALGHDARMSALMADAPELLSLLQDLQESLAEVRHRVMPVLTELREGGLGTTEGLSYLEAKYLLLLSYCIHIVFYLLMKAEGRPVRDHPVIARLVELRAYLEKIRPIDKQLSYQIDKLLKA 373
BLAST of mRNA_P-lacustris_contig961.15970.1 vs. uniprot
Match: A0A835Z4Q7_9STRA (Sas10 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q7_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.160e-24 Identity = 55/72 (76.39%), Postives = 60/72 (83.33%), Query Frame = 2
Query: 2273 KRGASYTIIKNRGLTPHKNKLNRNPRSKKREAFRKATIRRKGQVRDIRTGEADAYGGESTGIKSNVTRSRKL 2488
KR ASY IIKNRGLTPHK+KLNRNPR KKREA+RKA IRRKGQVR++RT EA Y GE TGI+S VTR RK
Sbjct: 3 KRAASYEIIKNRGLTPHKSKLNRNPRVKKREAYRKAVIRRKGQVREVRTNEAGRYAGEGTGIRSTVTRGRKF 74
BLAST of mRNA_P-lacustris_contig961.15970.1 vs. uniprot
Match: A0A8K1FNF9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNF9_PYTOL) HSP 1 Score: 119 bits (299), Expect = 1.830e-24 Identity = 70/118 (59.32%), Postives = 86/118 (72.88%), Query Frame = 2
Query: 2141 FYDAVAKEKERKKRAKKEKY-HPQARIAGALEAELEAERAAKGETKRGASYTIIKNRGLTPHKNKLNRNPRSKKREAFRKATIRRKGQVRDIRTGEADAYGGESTGIKSNVTRSRKLK 2491
FY+A +EKE +AKK+ Y H + +A + E + + + K RGAS+ IIKN+GL HKNKLNRNPR KKR +RKA IRRKGQVRD+R GEA YGGESTGIKSN+TRSRKL+
Sbjct: 393 FYEAALREKEALDQAKKQFYSHEKPGLASSDEEDSDEDDGGK----RGASFEIIKNKGLKAHKNKLNRNPRVKKRMQYRKAVIRRKGQVRDVRVGEAGRYGGESTGIKSNLTRSRKLR 506
BLAST of mRNA_P-lacustris_contig961.15970.1 vs. uniprot
Match: A0A4D9DG17_9STRA (Sas10 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DG17_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.650e-24 Identity = 80/249 (32.13%), Postives = 133/249 (53.41%), Query Frame = 1
Query: 505 WGKSRSSYYNADTADLEIGQEFEDAEAEEEAARELQRASYKRLDPADYGEEGEGRGEEAIHMGKQEGEGARLKGKGKTSAKRRRGEEANTTTSGQGAALLAMRSDLEQIALGEGGEVETSVFKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNV---TSEIGASKDGLVYLRTRQQLLLAYCMNVCFYMILKAKGEPAKGHPVVRRLLSLRALLEDMSILDDKMSSQVDLLLR 1242
WGK ++ YYNAD DLEIGQ+FE+AE EE AARE+++A Y ++ DY + +++I + K+ K R E + + + Q ++ + E+E + ++ S KL ++ + +PEL LL + + +L L + V+PL T + +++G+ YL +QQLLL YC+N+ +Y++LKA+G K HPV+ +L+ LR +E M LD K+ +D L +
Sbjct: 110 WGKHKNQYYNADAVDLEIGQDFEEAEEEEIAAREVEQARYDEVEENDYLDGWNS--DKSILVQKK---------------KLMRPEIGMHSITKPNTQSITSGLSSWQESIMDQTEMEMARLEQGLLTTSTAGKLRILSTSSPELLTLLEDFKDKLSELQDRVEPLAEMARDGTCAVSLNEEGVAYLEVKQQLLLNYCLNLTYYLLLKAEGRAVKDHPVIAQLVELRVAMEKMRPLDAKLKYHLDRLTK 341
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 621.7 |
| Seed ortholog evalue | 4.9e-175 |
| Seed eggNOG ortholog | 2880.D8LBR3 |
| Preferred name | UTP3 |
| KEGG ko | ko:K14765,ko:K14767 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0031974,GO:0031981,GO:0032040,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048513,GO:0048731,GO:0048856,GO:0060322,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1990904 |
| EggNOG free text desc. | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| EggNOG OGs | KOG3118@1,KOG3118@2759 |
| Ec32 ortholog description | Sas10 C-terminal domain |
| Ec32 ortholog | Ec-27_003010.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03009 |
| Exons | 8 |
| Model size | 3332 |
| Cds size | 2475 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817392.6485786-UTR-P-lacustris_contig961:69816..69888 | 1622817392.6485786-UTR-P-lacustris_contig961:69816..69888 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig961 69817..69888 + |
| 1693495032.2190804-UTR-P-lacustris_contig961:69816..69888 | 1693495032.2190804-UTR-P-lacustris_contig961:69816..69888 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig961 69817..69888 + |
| 1622817392.7489903-UTR-P-lacustris_contig961:78525..79310 | 1622817392.7489903-UTR-P-lacustris_contig961:78525..79310 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig961 78526..79310 + |
| 1693495032.3239522-UTR-P-lacustris_contig961:78525..79310 | 1693495032.3239522-UTR-P-lacustris_contig961:78525..79310 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig961 78526..79310 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817392.6609728-CDS-P-lacustris_contig961:69888..69991 | 1622817392.6609728-CDS-P-lacustris_contig961:69888..69991 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 69889..69991 + |
| 1693495032.2333622-CDS-P-lacustris_contig961:69888..69991 | 1693495032.2333622-CDS-P-lacustris_contig961:69888..69991 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 69889..69991 + |
| 1622817392.6718605-CDS-P-lacustris_contig961:70994..71104 | 1622817392.6718605-CDS-P-lacustris_contig961:70994..71104 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 70995..71104 + |
| 1693495032.2451053-CDS-P-lacustris_contig961:70994..71104 | 1693495032.2451053-CDS-P-lacustris_contig961:70994..71104 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 70995..71104 + |
| 1622817392.682284-CDS-P-lacustris_contig961:73795..73912 | 1622817392.682284-CDS-P-lacustris_contig961:73795..73912 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 73796..73912 + |
| 1693495032.255758-CDS-P-lacustris_contig961:73795..73912 | 1693495032.255758-CDS-P-lacustris_contig961:73795..73912 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 73796..73912 + |
| 1622817392.6927168-CDS-P-lacustris_contig961:74826..74942 | 1622817392.6927168-CDS-P-lacustris_contig961:74826..74942 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 74827..74942 + |
| 1693495032.2730784-CDS-P-lacustris_contig961:74826..74942 | 1693495032.2730784-CDS-P-lacustris_contig961:74826..74942 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 74827..74942 + |
| 1622817392.7033675-CDS-P-lacustris_contig961:75307..75641 | 1622817392.7033675-CDS-P-lacustris_contig961:75307..75641 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 75308..75641 + |
| 1693495032.2823548-CDS-P-lacustris_contig961:75307..75641 | 1693495032.2823548-CDS-P-lacustris_contig961:75307..75641 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 75308..75641 + |
| 1622817392.7173574-CDS-P-lacustris_contig961:75828..76095 | 1622817392.7173574-CDS-P-lacustris_contig961:75828..76095 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 75829..76095 + |
| 1693495032.2917001-CDS-P-lacustris_contig961:75828..76095 | 1693495032.2917001-CDS-P-lacustris_contig961:75828..76095 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 75829..76095 + |
| 1622817392.7284427-CDS-P-lacustris_contig961:76773..78055 | 1622817392.7284427-CDS-P-lacustris_contig961:76773..78055 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 76774..78055 + |
| 1693495032.3009717-CDS-P-lacustris_contig961:76773..78055 | 1693495032.3009717-CDS-P-lacustris_contig961:76773..78055 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 76774..78055 + |
| 1622817392.7390018-CDS-P-lacustris_contig961:78379..78525 | 1622817392.7390018-CDS-P-lacustris_contig961:78379..78525 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 78380..78525 + |
| 1693495032.3106415-CDS-P-lacustris_contig961:78379..78525 | 1693495032.3106415-CDS-P-lacustris_contig961:78379..78525 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig961 78380..78525 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig961.15970.1 >prot_P-lacustris_contig961.15970.1 ID=prot_P-lacustris_contig961.15970.1|Name=mRNA_P-lacustris_contig961.15970.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=825bp
MAPPRGRGGRRGTGRGGGKRSTGRGTRRSRTAPESNPENEELYTDVDRFH
MQKDNIKFGGGAGDSSDSDDLDGSEEEEGVMDLEGAGDGSSEDDDEGSEE
DDSDGSDLPELPEHVRRAAMGASSDEDDDSSDGDGQGGGKFSAGWGKSRS
SYYNADTADLEIGQEFEDAEAEEEAARELQRASYKRLDPADYGEEGEGRG
EEAIHMGKQEGEGARLKGKGKTSAKRRRGEEANTTTSGQGAALLAMRSDL
EQIALGEGGEVETSVFKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQL
GTLTESVQPLVSNVTSEIGASKDGLVYLRTRQQLLLAYCMNVCFYMILKA
KGEPAKGHPVVRRLLSLRALLEDMSILDDKMSSQVDLLLRALRSGIDLAG
AGATDSDDAEEEEEGGGGESEGRGRSVSVSTERGKIRVGTHGGGGDGGCR
AEAEEGEGEDVDEEGLEEEEARFMGGGGRGNSSEAEDGAGEGAAQQELSK
SAKKKRKRAAREKALVEARAKLAAGGGNDDGSLGDFGDEDVDESTAMNGS
GGGNLLQGMVNRISQRGQSTTARKGRGLQGDLDVPVRERDQTIRVRRPAP
GDKSDSEEGGAGGDGSGTDCEDDDLMGGGGGGFMDGLPPGLLEGLGRGGG
DDDREAGGQKKKKAASKEGKRGRDDGEEGSGGEGGWRRRFLRRCGEGEGA
QEARQERKVPPAGAHRRGPGGRAGGGEGGQGRDQARRQLHHHKKPGSDAA
QEQAQPKPAIQEEGGLPQGDHPPEGAGSGHPHRRGRCLRWRVHWNQVQRY
AQPQAQGLVRLKPCSCSSSFLPMG* back to topmRNA from alignment at P-lacustris_contig961:69817..79310+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig961.15970.1 ID=mRNA_P-lacustris_contig961.15970.1|Name=mRNA_P-lacustris_contig961.15970.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=9494bp|location=Sequence derived from alignment at P-lacustris_contig961:69817..79310+ (Pleurocladia lacustris SAG_25_93)
TGCGTGCTCATTTTTTTCTGTCATCTTCCAAGGCACGACAGCAGACGAGA
CTCACTCTTTTCGCAGCAGATTATGGCGCCGCCCAGAGGACGAGGGGGTC
GAAGGGGCACGGGAAGAGGTGGCGGGAAGCGTTCGACTGGGAGGGGTACG
CGAAGAAGTCGAACAGCGCCAGAGAGTAAGTGCCAGGTTTCTTTTTTACC
ACCATTGAGTTGCGCAACAGCAGCGCTCGTTGCTCATGGCTCATGGACAC
AACGGCACCGTCACGACTGTATCGTTTTATCTACTACCTGCCCGGTCTTT
GTAGTTTGCTTCTCTCCGCCCCTTCAGTTATGCAGAGGCTGCGCTATCCT
GCTATTTCAAGCTTTATACCCAGCTAAACTCCCGTAATTCCTTCCATCCA
GCGTGGGCTTGCTGAGCGCTGCGCTGTCCTCAGCCATTACCTCTCCGAAT
TTCAGAAATGGTGATGCGGTGGCGCTTTACGACCCACCTGGGATGGATTG
TCGAGATTTAAAGGGCCTATCCCCTCGCATCACCGGTAGGCGCTTGGTTA
GAGGCAGAGAGAGAAGGAGAGACGGCGAGAGGAAGGGCCGCCTGGACTGT
GCAGTGTGATGACGGTGTATAACACCCCCCTCTTCGACTCTCTACACCCT
CTGTGTGCAACATCTGAGTGGGATATTTACTCTGTAACTGGTATCCACGC
ACCCAGATGGCCCCGGCACCCGAGGTTTGGGTGCGGCACAAGCGGGGGAA
AGAGAGAGATGACCGCACGAGAGCGTGTCGAGCGCTGAAACACACCAGAA
TTGAAACTATCCAGCTAAGACCTTTCAACAGTGATCTTCGTCGGTGTGTG
TCCTCAAGAAACTCTTGTCGGTGTTTGTCCACTGAGCAGTTGGAATACGC
CCACCCTTCTCCGCGTCTTGGCTCGAGATACATGTATCGAAAAAAAAACT
CACATCCACACGTAACTTCAACCACCGAAAAATTTACTCTACATGTACTC
TGTTTACTGGTGCATCGAGCATTCTGAAGGTCGCTTGGCTGCTGTGCAAT
GTATGGCTTCGTCTTGGTTTGCTCGTCTCTCCCCTGCTCCACACCCTCCC
TCCCTCTCTCTCCCCCTCTCTCTCTCGCGCGCCGGCTCTGTGTGTTCAAA
CATGGTTCGTCAAATGACGATGGTAAAGGCAACCCGGAGAACGAGGAGCT
CTATACGGACGTCGACCGTTTCCACATGCAGAAGGATAATATCAAATTCG
GCGGCGGGGCGGGGGACAGCAGCGATTCGGACGACCTGGTAAGCTATTTT
CTGGCTAGGCTTTGTGTGTCAGGCCCTCGCCACAAGGAGTTAGAGTTATG
ACAAGTTATGGTGGCATGCCATTGGGGCTCGATTCTCTCGTCCAATCAGC
ACTATGAAGTACGTTTACCCCCAGAGGTGCGGCTAGGTAGGTACGGTACG
TCGGAGGGTTAGGTTCCCTTTCGCCATTCCGACCAGGGGTCCCGTGTACA
GTAGTAGTACGAGTCAATAATCATGAACGGCTCTCTCTTGCTTATGGTGG
GGTTTATCCCTCCAAAAAACACTTGTAACGTGGGCCTTGGAACTTGGAAT
TCCGTGTTCCAAGCGTGCCAAGTGGGAGCGATGGGCTTTGCCCTCCCCCC
GCTCGTTTGACATGTCACCTGTGACACCGAATTTCCTGGGGGCTCACCTC
TGTCTCTGTTTTTGTTTTGTCTCTTATCGCGTTTGTGTTGACTGTTGACT
CTCTGGGTCCTTTGTACCGTGGGCTGGTCAGCTTGTGACCACGGAAGTCG
ACTGCATCAGTTGGACCAGTACGGACAATAGAAGGTACTGAGGAGAGGTC
AGAACAGTTTTTATGTAAAGACGAAAACAACAAGTTCCAATCGTTGTGGC
TTGTATTGGGCGGGTCTTGATAAAAATTTGGAACTTGACACTCGGAACTC
GGAACTCGGAACCCTCCTCTGGTTCGCCTATCACACACGATATTTTCCGG
GAAAGAGTTGCCGCCGCCGAGGTTCCAAGTTTGTTGATCCCACCACCTGG
ATAATTTTAATGAACTCGTTCCTAAAAAGTGGCGAAGAGTCCACTTGGAA
CGGGCTAAGTGGAACGGGCTCATCGGTGGCACAGTGCCTGAAACTGTTCT
GGTTCAAGATATGTTTAACGGATGTGCGTAATCGCGTGGAGGGGCATGCC
CAATGCCCATGCTAGACCGGTTGACTGCTACTCATTCAGGTGTCATCTGT
ATTGCCATCATGAGATCCTTCGACAGCACAAAAAACGGCGTCACCGATGC
CTGTGTAGCGTTTGTTCCGGAATGGAAGATGTGCGAAAAAAGTACGGGGC
CTGTCGCGAGCTGCAACAGTTGAATCGACACGTCCCGAGCACCCTCGAGG
TGCGGAATTGCACATCGAGCACCGCCTGTTCCGCGTGACGCCTAGCACTT
GCAGATAGTCTTCGCCCGTCAACGGGATCCACCGAAATCGGACACGACCC
ATACTGCCCAACGCAGCGGACGCGTTGCGCAACTCACTGGTGGTAAAAAG
AAACCTGGCACTTACTCTCTGGTCCTGTTCGACTTCTTTGCTTGCCCCTT
CCAGTCGAACGCTTCCCGCCACCTCTTCCCGTGCCCCTTCGACCCTCTCG
TCCTCTGGGCGGCGCCATAATCTGCTGCAGAGTGTGCGTGTCGTGCCAAG
ACTTTTCACAGAAAAGACGCTGGCGCGTCGTAGATGGCAACAACTTCCAA
CAAAATAATCCACATCAGATCTACGAATGCATCTCACCTGCCCGCCGACC
CCGTCATCGCAGTCCATCCTGTTCCTTTTTGCGCGGGGCAATCGCCCACC
AGACAACACCGTCCTTTGGGCAATCGATCCCCGGCGCTTCCCGATGCGGA
CGTTGGTTATTTTTTTTCTCGCAGATTCAGCGCGCGCACGTTGAAACGAG
CTGTGTTCCCGATTACGTGCTCAATTGTTTTCAATTTTCTGGGTAGGGCA
GGGTTAAGGCACAAAGATGGGAGCTTGGAACTCCAAGTTCCAAGTTCCAA
ATTTTTCTGACGGGGTTTAAGACCCGCCCTTACCCCTACCCAGGAAATGT
ACGGTGTTCCAGAAGCGGGAACACAGAACGTTGCAACGCGCACGCTCATA
TTCTGTGATGAAAAAAATAACGATCGTGCGCCGGGGTTGGGAAGTATGGG
TCTTGACCGCTTTCGGCGGATGCCGTCGGCGAGTGAAGACTCTCTGCATT
GTGGTATGCTAGGCATGAGGCAGAATAGACGGTGCTCGTGGTGCAACCCG
CACCCTCGAGAGTGCTTTTGACTTGTTGATTCATCTTTTGCAGTCAGGGA
CAGGCGCCAAACCGTTTTTTACGCACCTACCATTCTTGAGCAATCGCTAC
ACCGGCATCCGGCATCCGGCATCTGTGACGCTGTTTGTTGTGCTCTCGAA
GCACCTGATGATGGCAGTACAGATTACACCTGAGTCGGCAGCAGACAACA
CGTCTAGCATGAACATGGCGCACGTGATTTCGCACATCCGTCAACGCATC
TTGAACCAGAACAGTGTCAGTGTCAGACACTTTCTTTCCCTTCCCTTTGC
CAACGATGGCCGAGCCCGTCCCAAGTGGACAATTGGACTGCTGTTTTTAG
GAACGAGCTCATAAAAATTTTACACGCGGCTGGATCAACAATACACGGAA
CCTTGGTGGCTGCAACTCTTTCCAGGAATCACATCGCGTGCGGTTGGCCA
ACCAGAGGAGAGTTCTGAGATCCACGTTCCAAGGTCTTTTTGGAGGGTTG
AACCCCTCCCTCACCACCGCACGTTTTTTTTGCGCAAGCCCAACCGATGC
CCCCTGTCTGTCCTTGCCTTGGAAATGGGTATCGCGCTCTTTTGTGTTTC
GTGTTTTTGCCCCTGGCTTGACTTTCGGCTCCCCCGTGGACGGACGTGCA
CATGCGTGTATACGTGCGTACGTGCACAGGATGGGTCTGAGGAAGAAGAG
GGTGTCATGGACCTCGAAGGAGCTGGCGATGGCTCAAGCGAAGACGACGA
CGAAGGCTCGGAAGAAGACGATTCGGACGGGTCTGACTTGCCGGAGGTCC
GTTTTTTTCTCCTCGTTTCGTTTCTTTGCTTTACTCGGCTCCCCTCTCCC
CCCTCCTCCTCGAAAATTTCAATGGTGGCCAAACTGGGCGGGTCAGTTGA
GAGGATAACGCAGCTACACACGAGCGGACACAAAAAAAAGTCACTATTCG
GGTGAAAAAACGCACGAAGAGCTAAGGGAGAGCCTATTGAGTTGGAGATG
TCTCTGCCTGCAGGGGTAGGAACGACTCTCAGCCTCGAAAGCAATGAGTG
GTCAACAAAAAAATACCAAAGTAGGCAGCAGGGTACCCCCGCCCGCCCCC
GCCCTTCCTGTAGACTTGATTTGAAAGTGACCGCATTGAAGTGTGATGGC
AATGATGAGATTTGCGTATGCGGCACCGTCTAAAGCAGAATGATAGTATG
TTGGGAGCAGAGCTTGCCCTCCTTCCGCTACGTGTTCTTTGCGTGTGTGA
GAGAGAGAGAGAGGGGGAGAGAGCGAGCTCGAACCCCGTTGGTCGACGAT
CCACGTTCACTATGCGTGTGTCTATGTCTGCGAGGCACGTGCGTCCGTCT
GCACTGTCCCTTGTGGATTAGTCGCACGTACAATCTACAATCAGTGCAAT
AGGAGGAGCGTTTATGAACCCTTGTCTTATGTTCAGCAAATGCGTCTCTT
TGTGGAAGGAAGTCTGTCGAGTCACCTCGCCTCACCTCACCCCCCAAGCC
AAGTAGACAAGACAATCAAAATCGTGCATTCATTGCATTCATTCGAGACA
AGACAATCAAAATCGTGCATTCATTGCATTCATTCGATGTTTTACCCAGA
TGTGTCTGTGCGAGGCAGTACAGCGAGCAATCCAAGCGGGGTTCACAGTT
CCACGCCCACTTACATGTCCGGGGGTTGTTGCTATTGCTATTTATGTTGT
CCTTCCTCAGCTACCAGAACACGTCCGAAGAGCTGCAATGGGAGCTTCCT
CGGACGAAGACGACGACAGCAGCGACGGGGATGGTCAAGGCGGGGGGAAG
TTCAGTGCGGGTTGGGGCAAAAGCAGGTACGCCAGCTCGGCATAAGGTGC
ACCACGGAGGTTGTGGGTTTGTTGTCCGGGAACACCCTGCTATCGGCCGC
CACCCATCTGACGCAATGCGTGCGTCGGGAGTGTCCGTACGGCAGTGGCG
AGGTCGGAAAATAATATCGTGTGTGTGTAGAGGAAGCTTGCCGTTGCCCA
GCGTCTGGCGAGTTTTTTTGTTTATCGTGTAAGTTGGGTTCCTCTTCTGT
AAATGAGATAGCTGACAGGAGGGTTCCTTTTTTTTGCCATGGCTTGAACT
CATTTATTCCGCACAGCAACCACCACCGCCGCTGCCGCCATCGCCGTCGT
CGCCGCCCAAATACCGGCACCACGACCACGCACCTTATCAGGTCCTCCTA
CTACAACGCGGACACCGCCGACCTGGAGATCGGGCAGGAGTTCGAAGACG
CCGAGGCGGAAGAAGAGGCCGCGCGCGAGCTGCAGAGAGCGAGCTACAAG
CGGCTCGACCCTGCAGACTACGGCGAGGAGGGGGAGGGGAGGGGGGAAGA
GGCAATCCACATGGGAAAGCAGGAAGGGGAGGGGGCACGACTGAAGGGGA
AAGGGAAGACGTCCGCCAAACGACGGCGGGGTGAAGAGGCTAACACCACC
ACTTCCGGCCAAGGAGCGGCCTTGCTGGCGATGAGGAGCGACCTCGAGCA
GATCGCCCTCGGGGAGGGGGGAGAGGTGTGTGTTTTGCGCTCCATGTGTT
TTTTGTGTGAGCGTGTGGGTGTCTCGAGTCCGCGCCTTTCGCATTTGCTC
CGCCAGGGCCTTTATTGATCATCAGTACCGTATGCACGCCCCCCGTGCCA
AAGGAAACCCACTTGCCTGAAACCGCACAAGAATTTGCTAACCTCCGTTG
TAAAAAATCCAGGTGGAAACGTCGGTGTTCAAGAGAGACACCTCCAAGCT
GAGCCGACGCGACAAGCTGGAGCTCGTGCTCTCGGAGGCACCAGAACTGC
CGGCACTCCTGGGGGAGGTCCGCGCACAGCTTGGAACCCTCACGGAGTCG
GTGCAGCCGCTCGTATCGAACGTGACTTCCGAGATCGGCGCCAGCAAGGA
CGGACTGGTGTATCTACGCACCCGCCAGCAGCTGCTGCTGGCCTACTGCA
TGAACGTCTGCTTCTACATGATCCTCAAGGTGCCGTGGTGCGATGGGACG
GCCGGCTGATGCGCTCATGTTAGCTCTTGCTGTTGTTATTGGTGCTTGTT
GGATTTTTTTGCTTGTTTGGTTGGCACGATTTGGGTGCTTTGTCTTGTAT
TCGGACTGAAGAGAGGAGCATGCTCGTTCGTTGGTCGGTGTTTATTGTTT
CCTTTCAAACGCTAGGTGACTGGTATCCTCGTTCTATGTTATCGGCGGTT
TCAGTCCTACACGGCCGTACTGCTGTAGTGGGTCGGTTCGGAGTTGGTGC
TTGACTGAGTTTCCGGCTGACAGCGATGTCGAGACTGGCAACGGTTGGAC
GTAGGCCGTGGAGCTGGGGGGAGGAAATCGATCCCAACAATCAGTCTGAT
CGTAGTCACAGAATAGCATACAATCCTCTATATTTCACCTGCAGAAAAAT
TTGCAGCATACAAGCTTAACCCTCAAGCCTCAAGCTCGATTCGCAGCGCT
TCGCTAATGTGAAGGAAGGCAACCTGCTGCGCCCTGCCCCTCTTCCCCGC
GTCCCCAATGCCTGCATGGCCTTGTCTAGGACCAAGTGCTGCCCGCAATG
GTCTTTGCCTCAATTTTCGAGTGGACGTGCTTCACGCTTCACGAGGTCAT
CCTCGCTCACGGTCCGCTGAACACGTTTTTTGGCCCCGGCCTTGTTATGC
TTCGCAGGCAAAGGGCGAGCCCGCCAAGGGCCACCCCGTGGTGCGGCGCC
TCCTGTCGCTGCGCGCCCTCCTCGAGGACATGTCCATCCTTGACGACAAG
ATGTCGTCGCAGGTGGACCTCCTATTGCGCGCGCTCCGATCCGGGATCGA
CCTTGCCGGCGCAGGTGCTACGGACAGCGACGACGCGGAGGAAGAAGAAG
AAGGCGGCGGCGGAGAATCCGAAGGAAGAGGAAGAAGTGTATCAGTGTCG
ACAGAGCGAGGGAAGATCCGCGTTGGAACGCACGGCGGCGGCGGCGATGG
TGGATGTAGGGCTGAGGCGGAGGAAGGGGAAGGTGAAGACGTGGACGAAG
AGGGCCTTGAGGAGGAAGAGGCGAGGTTTATGGGAGGCGGAGGTCGTGGC
AACAGCTCGGAGGCGGAGGATGGCGCCGGAGAAGGAGCAGCGCAGCAGGA
GCTATCCAAGAGCGCCAAAAAGAAGCGCAAGAGGGCCGCCAGGGAGAAGG
CGCTGGTGGAGGCCAGGGCGAAGCTGGCCGCGGGCGGCGGGAACGACGAC
GGGTCGCTGGGCGACTTCGGAGACGAAGACGTGGACGAGTCGACGGCGAT
GAACGGCAGCGGCGGCGGAAACCTCCTGCAGGGTATGGTGAACCGAATAT
CTCAGAGAGGTCAGTCCACCACTGCAAGGAAAGGGCGCGGCCTTCAGGGT
GATCTGGATGTCCCCGTTCGGGAGCGAGACCAGACGATCCGCGTCCGGCG
CCCGGCGCCCGGCGACAAGAGCGACAGCGAGGAgGGGGGAGCGGGTGGGG
ATGGTAGCGGAACGGATTGCGAGGACGACGACTTGATGGGAGGCGGCGGC
GGTGGCTTTATGGACGGATTGCCGCCTGGGCTTCTGGAAGGGCTCGGCCG
CGGCGGAGGCGACGACGACCGGGAAGCCGGAGGCCAGAAGAAGAAGAAGG
CCGCGAGCAAGGAGGGGAAGCGAGGACGCGACGACGGGGAGGAAGGATCC
GGGGGAGAAGGGGGATGGCGAAGACGATTTCTACGACGCTGTGGCGAAGG
AGAAGGAGCGCAAGAAGCGCGCCAAGAAAGAAAAGTACCACCCGCAGGCG
CGCATCGCCGGGGCCCTGGAGGCCGAGCTGGAGGCGGAGAGGGCGGCCAA
GGGAGAGACCAAGCGCGGCGCCAGCTACACCATCATAAAAAACCGGGGTC
TGACGCCGCACAAGAACAAGCTCAACCGAAACCCGCGATCCAAGAAGAGG
GAGGCCTTCCGCAAGGCGACCATCCGCCGGAAGGGGCAGGTGAGAACAGG
AGACTCGAGAGGGAACCCACAGGCCTTCTTTCGACGGGACCCGGCCAGCC
TGTTCTGTCTAACTCTTGCGAGAGGAAAACACATAAGTTGGCTGTCGTTG
TGTTTTATCGAAATCCTCCTTCCTGCTGATTTCTGCCCGACGTTATCTTG
GCCCCACTCCCGTTCACCTGAGCGGTTTTAAGTGAACGATTGCACATGTT
TCTGGGGCGGAGCTAGCTTTGTGCCATCAAATACACTGGTGATACAAACT
TGCTGCTGTTCACCGATCGTCCCGTCCCGGTCGCCGTTTGCCCCTTTTAA
CCACGCGTGATAGGTTCGGGACATCCGCACCGGAGAGGCCGATGCCTACG
GTGGCGAGTCCACTGGAATCAAGTCCAACGTTACGCGCAGCCGCAAGCTC
AAGGGTTAGTGAGGCTAAAGCCATGCAGTTGTTCAAGTTCCTTCCTTCCG
ATGGGGTAGAAAGTGGGCGGGGAGGAAGATGCGGGTGCGTTGTTTTCTGC
CGAGGAGAGCACCATCTCGTGCAAGAGTGCCCCGTTCATGACGTTGCTTG
CGGGTTGTTGGCGGTGGTGATAGTGGCGATTGAGGTGATGGTGGTGAGTG
GTTAACCAATCAAGCTGGTTTTGGCGAATGTTCCCGAGCCACAAGCGTTG
TCGACGCCCCACGAGGATACTCCCCAAAGCAACAGCAATCAGTCCATGTA
AGCGCTCGATTGAGATAGAGAGAGAGCAAAGATCAAGATCGGTTTGGTTC
TTTCGGTATTTTTCTTTCAATCAATCGTGAGAACGTCCCTTGTTCTTTAC
AGTCCTTCTGCGTGTTTTTTAGTTGCGCAGCTAGCCCGACCCGGCTAGTC
TACCCTGTGAAGAGGCGACAGGATGGTCTTGGCGAGACACAAAACGCAGC
GAAAAACGTCGTCCTAAAAACGCGTGTGCGTGGTTGGTGTTTGGTCTCAC
ACAGAGACTCGAGACATTCTTTCCTCACTGTAGTAAAAAACGGGCAGCAG
CAATGTTTTGCGCCTCTCCCTTGTGTGGTACAAGTAGATCTGGAGTTGGA
CCCCCTTTAGCTTGGTGGGTTTGGCCGTGCTTGTCATGGGTGCGGTCTAC
CCATGCATAAGTGTCCCCCCCGGCTCGAAGAAGAAAAGAGGGGCAGCGAC
CACGCTAGCAGCGATGAGCGTGCGGCACGGTGTGTTCTTCCCTGCCTTGC
CTTGTTCTTACAAAACCGCTACTACTGCTCCTGCCTCTGCGGTG back to topCoding sequence (CDS) from alignment at P-lacustris_contig961:69817..79310+ >mRNA_P-lacustris_contig961.15970.1 ID=mRNA_P-lacustris_contig961.15970.1|Name=mRNA_P-lacustris_contig961.15970.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=4950bp|location=Sequence derived from alignment at P-lacustris_contig961:69817..79310+ (Pleurocladia lacustris SAG_25_93)
ATGGCGCCGCCCAGAGGACGAGGGGGTCGAAGGGGCACGGGAAGAGGTGG
CGGGAAGCGTTCGACTGGGAGGGGTACGCGAAGAAGTCGAACAGCGCCAG
AGAATGGCGCCGCCCAGAGGACGAGGGGGTCGAAGGGGCACGGGAAGAGG
TGGCGGGAAGCGTTCGACTGGGAGGGGTACGCGAAGAAGTCGAACAGCGC
CAGAGAGCAACCCGGAGAACGAGGAGCTCTATACGGACGTCGACCGTTTC
CACATGCAGAAGGATAATATCAAATTCGGCGGCGGGGCGGGGGACAGCAG
CGATTCGGACGACCTGGCAACCCGGAGAACGAGGAGCTCTATACGGACGT
CGACCGTTTCCACATGCAGAAGGATAATATCAAATTCGGCGGCGGGGCGG
GGGACAGCAGCGATTCGGACGACCTGGATGGGTCTGAGGAAGAAGAGGGT
GTCATGGACCTCGAAGGAGCTGGCGATGGCTCAAGCGAAGACGACGACGA
AGGCTCGGAAGAAGACGATTCGGACGGGTCTGACTTGCCGGAGGATGGGT
CTGAGGAAGAAGAGGGTGTCATGGACCTCGAAGGAGCTGGCGATGGCTCA
AGCGAAGACGACGACGAAGGCTCGGAAGAAGACGATTCGGACGGGTCTGA
CTTGCCGGAGCTACCAGAACACGTCCGAAGAGCTGCAATGGGAGCTTCCT
CGGACGAAGACGACGACAGCAGCGACGGGGATGGTCAAGGCGGGGGGAAG
TTCAGTGCGGGTTGGGGCAAAAGCAGCTACCAGAACACGTCCGAAGAGCT
GCAATGGGAGCTTCCTCGGACGAAGACGACGACAGCAGCGACGGGGATGG
TCAAGGCGGGGGGAAGTTCAGTGCGGGTTGGGGCAAAAGCAGGTCCTCCT
ACTACAACGCGGACACCGCCGACCTGGAGATCGGGCAGGAGTTCGAAGAC
GCCGAGGCGGAAGAAGAGGCCGCGCGCGAGCTGCAGAGAGCGAGCTACAA
GCGGCTCGACCCTGCAGACTACGGCGAGGAGGGGGAGGGGAGGGGGGAAG
AGGCAATCCACATGGGAAAGCAGGAAGGGGAGGGGGCACGACTGAAGGGG
AAAGGGAAGACGTCCGCCAAACGACGGCGGGGTGAAGAGGCTAACACCAC
CACTTCCGGCCAAGGAGCGGCCTTGCTGGCGATGAGGAGCGACCTCGAGC
AGATCGCCCTCGGGGAGGGGGGAGAGGTCCTCCTACTACAACGCGGACAC
CGCCGACCTGGAGATCGGGCAGGAGTTCGAAGACGCCGAGGCGGAAGAAG
AGGCCGCGCGCGAGCTGCAGAGAGCGAGCTACAAGCGGCTCGACCCTGCA
GACTACGGCGAGGAGGGGGAGGGGAGGGGGGAAGAGGCAATCCACATGGG
AAAGCAGGAAGGGGAGGGGGCACGACTGAAGGGGAAAGGGAAGACGTCCG
CCAAACGACGGCGGGGTGAAGAGGCTAACACCACCACTTCCGGCCAAGGA
GCGGCCTTGCTGGCGATGAGGAGCGACCTCGAGCAGATCGCCCTCGGGGA
GGGGGGAGAGGTGGAAACGTCGGTGTTCAAGAGAGACACCTCCAAGCTGA
GCCGACGCGACAAGCTGGAGCTCGTGCTCTCGGAGGCACCAGAACTGCCG
GCACTCCTGGGGGAGGTCCGCGCACAGCTTGGAACCCTCACGGAGTCGGT
GCAGCCGCTCGTATCGAACGTGACTTCCGAGATCGGCGCCAGCAAGGACG
GACTGGTGTATCTACGCACCCGCCAGCAGCTGCTGCTGGCCTACTGCATG
AACGTCTGCTTCTACATGATCCTCAAGGTGGAAACGTCGGTGTTCAAGAG
AGACACCTCCAAGCTGAGCCGACGCGACAAGCTGGAGCTCGTGCTCTCGG
AGGCACCAGAACTGCCGGCACTCCTGGGGGAGGTCCGCGCACAGCTTGGA
ACCCTCACGGAGTCGGTGCAGCCGCTCGTATCGAACGTGACTTCCGAGAT
CGGCGCCAGCAAGGACGGACTGGTGTATCTACGCACCCGCCAGCAGCTGC
TGCTGGCCTACTGCATGAACGTCTGCTTCTACATGATCCTCAAGGCAAAG
GGCGAGCCCGCCAAGGGCCACCCCGTGGTGCGGCGCCTCCTGTCGCTGCG
CGCCCTCCTCGAGGACATGTCCATCCTTGACGACAAGATGTCGTCGCAGG
TGGACCTCCTATTGCGCGCGCTCCGATCCGGGATCGACCTTGCCGGCGCA
GGTGCTACGGACAGCGACGACGCGGAGGAAGAAGAAGAAGGCGGCGGCGG
AGAATCCGAAGGAAGAGGAAGAAGTGTATCAGTGTCGACAGAGCGAGGGA
AGATCCGCGTTGGAACGCACGGCGGCGGCGGCGATGGTGGATGTAGGGCT
GAGGCGGAGGAAGGGGAAGGTGAAGACGTGGACGAAGAGGGCCTTGAGGA
GGAAGAGGCGAGGTTTATGGGAGGCGGAGGTCGTGGCAACAGCTCGGAGG
CGGAGGATGGCGCCGGAGAAGGAGCAGCGCAGCAGGAGCTATCCAAGAGC
GCCAAAAAGAAGCGCAAGAGGGCCGCCAGGGAGAAGGCGCTGGTGGAGGC
CAGGGCGAAGCTGGCCGCGGGCGGCGGGAACGACGACGGGTCGCTGGGCG
ACTTCGGAGACGAAGACGTGGACGAGTCGACGGCGATGAACGGCAGCGGC
GGCGGAAACCTCCTGCAGGGTATGGTGAACCGAATATCTCAGAGAGGTCA
GTCCACCACTGCAAGGAAAGGGCGCGGCCTTCAGGGTGATCTGGATGTCC
CCGTTCGGGAGCGAGACCAGACGATCCGCGTCCGGCGCCCGGCGCCCGGC
GACAAGAGCGACAGCGAGGAgGGGGGAGCGGGTGGGGATGGTAGCGGAAC
GGATTGCGAGGACGACGACTTGATGGGAGGCGGCGGCGGTGGCTTTATGG
ACGGATTGCCGCCTGGGCTTCTGGAAGGGCTCGGCCGCGGCGGAGGCGAC
GACGACCGGGAAGCCGGAGGCCAGAAGAAGAAGAAGGCCGCGAGCAAGGA
GGGGAAGCGAGGACGCGACGACGGGGAGGAAGGATCCGGGGGAGAAGGGG
GATGGCGAAGACGATTTCTACGACGCTGTGGCGAAGGAGAAGGAGCGCAA
GAAGCGCGCCAAGAAAGAAAAGTACCACCCGCAGGCGCGCATCGCCGGGG
CCCTGGAGGCCGAGCTGGAGGCGGAGAGGGCGGCCAAGGGAGAGACCAAG
CGCGGCGCCAGCTACACCATCATAAAAAACCGGGGTCTGACGCCGCACAA
GAACAAGCTCAACCGAAACCCGCGATCCAAGAAGAGGGAGGCCTTCCGCA
AGGCGACCATCCGCCGGAAGGGGCAGGCAAAGGGCGAGCCCGCCAAGGGC
CACCCCGTGGTGCGGCGCCTCCTGTCGCTGCGCGCCCTCCTCGAGGACAT
GTCCATCCTTGACGACAAGATGTCGTCGCAGGTGGACCTCCTATTGCGCG
CGCTCCGATCCGGGATCGACCTTGCCGGCGCAGGTGCTACGGACAGCGAC
GACGCGGAGGAAGAAGAAGAAGGCGGCGGCGGAGAATCCGAAGGAAGAGG
AAGAAGTGTATCAGTGTCGACAGAGCGAGGGAAGATCCGCGTTGGAACGC
ACGGCGGCGGCGGCGATGGTGGATGTAGGGCTGAGGCGGAGGAAGGGGAA
GGTGAAGACGTGGACGAAGAGGGCCTTGAGGAGGAAGAGGCGAGGTTTAT
GGGAGGCGGAGGTCGTGGCAACAGCTCGGAGGCGGAGGATGGCGCCGGAG
AAGGAGCAGCGCAGCAGGAGCTATCCAAGAGCGCCAAAAAGAAGCGCAAG
AGGGCCGCCAGGGAGAAGGCGCTGGTGGAGGCCAGGGCGAAGCTGGCCGC
GGGCGGCGGGAACGACGACGGGTCGCTGGGCGACTTCGGAGACGAAGACG
TGGACGAGTCGACGGCGATGAACGGCAGCGGCGGCGGAAACCTCCTGCAG
GGTATGGTGAACCGAATATCTCAGAGAGGTCAGTCCACCACTGCAAGGAA
AGGGCGCGGCCTTCAGGGTGATCTGGATGTCCCCGTTCGGGAGCGAGACC
AGACGATCCGCGTCCGGCGCCCGGCGCCCGGCGACAAGAGCGACAGCGAG
GAgGGGGGAGCGGGTGGGGATGGTAGCGGAACGGATTGCGAGGACGACGA
CTTGATGGGAGGCGGCGGCGGTGGCTTTATGGACGGATTGCCGCCTGGGC
TTCTGGAAGGGCTCGGCCGCGGCGGAGGCGACGACGACCGGGAAGCCGGA
GGCCAGAAGAAGAAGAAGGCCGCGAGCAAGGAGGGGAAGCGAGGACGCGA
CGACGGGGAGGAAGGATCCGGGGGAGAAGGGGGATGGCGAAGACGATTTC
TACGACGCTGTGGCGAAGGAGAAGGAGCGCAAGAAGCGCGCCAAGAAAGA
AAAGTACCACCCGCAGGCGCGCATCGCCGGGGCCCTGGAGGCCGAGCTGG
AGGCGGAGAGGGCGGCCAAGGGAGAGACCAAGCGCGGCGCCAGCTACACC
ATCATAAAAAACCGGGGTCTGACGCCGCACAAGAACAAGCTCAACCGAAA
CCCGCGATCCAAGAAGAGGGAGGCCTTCCGCAAGGCGACCATCCGCCGGA
AGGGGCAGGTTCGGGACATCCGCACCGGAGAGGCCGATGCCTACGGTGGC
GAGTCCACTGGAATCAAGTCCAACGTTACGCGCAGCCGCAAGCTCAAGGG
TTAGTGAGGCTAAAGCCATGCAGTTGTTCAAGTTCCTTCCTTCCGATGGG
GTAGGTTCGGGACATCCGCACCGGAGAGGCCGATGCCTACGGTGGCGAGT
CCACTGGAATCAAGTCCAACGTTACGCGCAGCCGCAAGCTCAAGGGTTAG
TGAGGCTAAAGCCATGCAGTTGTTCAAGTTCCTTCCTTCCGATGGGGTAG back to top
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