mRNA_P-lacustris_contig96.15954.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig96.15954.1 vs. uniprot
Match: D7FN31_ECTSI (Fumarate hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN31_ECTSI) HSP 1 Score: 530 bits (1365), Expect = 1.690e-175 Identity = 262/293 (89.42%), Postives = 276/293 (94.20%), Query Frame = 1
Query: 589 QGVYDTYTKTNLRYSQVAPTDMFSEKNTGTNLPAQIDIFATPGNEYTFQFMAKGGGSANKTFLFQKTKALLNEKALEKFFLDEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLASSKYLDGLPTTGDASGRAFRDLEWEARVLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDEAQISPEVVHVDLNQPMDKIREFLGGYSVRTRLSLSGTIVVARDIAHAKLQERIDAGKGVAGLRQGPHHLLRWTG 1467
+GVYDTYT TNLRYSQVAPTDMF+EKNTGTNLPAQID+FATPG EY FQFMAKGGGSANKTFLFQ+TKALLNEKALEKFF DEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLA +KYLDGLPTTGD SGRAFRDLEWE +VLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDE+QISPEVV VDLNQPMDKIREFLGG+SVRTRLSL+GTIVVARDIAHAKLQERIDAGKG+ + H++ + G
Sbjct: 201 KGVYDTYTNTNLRYSQVAPTDMFTEKNTGTNLPAQIDLFATPGKEYAFQFMAKGGGSANKTFLFQRTKALLNEKALEKFFWDEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLAWAKYLDGLPTTGDTSGRAFRDLEWEDKVLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDESQISPEVVQVDLNQPMDKIREFLGGFSVRTRLSLTGTIVVARDIAHAKLQERIDAGKGLPDYVKD--HIIYYAG 491
BLAST of mRNA_P-lacustris_contig96.15954.1 vs. uniprot
Match: A0A7S2WVC0_9STRA (Fumarate hydratase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVC0_9STRA) HSP 1 Score: 443 bits (1140), Expect = 2.250e-142 Identity = 211/278 (75.90%), Postives = 245/278 (88.13%), Query Frame = 1
Query: 589 QGVYDTYTKTNLRYSQVAPTDMFSEKNTGTNLPAQIDIFATPGNEYTFQFMAKGGGSANKTFLFQKTKALLNEKALEKFFLDEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLASSKYLDGLPTTGDASGRAFRDLEWEARVLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDEAQISPEVVHVDLNQPMDKIREFLGGYSVRTRLSLSGTIVVARDIAHAKLQERIDAGKGV 1422
QGVYDTYT TNLRYSQV P+DMFSE NT TNLPAQID+FAT GNEY F F+AKGGGSANKTFLFQ+TKALLN K+L +F ++IK+LGTAACPPYHL+IV+GGLSAE+TLKTVKLAS+KYLD LPT GD SG AFRDLEWEA +LK+ Q++GIGAQFGGKYFCHDVRV+RLPRHGASCPVGIGVSCSADRQ KIT EG+F+EKLE DV +Y+P+V+E +S EVV VDLN+PMD+IR L Y +RTRLSL+GT+VVARDIAHAKL ERI++G+G+
Sbjct: 167 QGVYDTYTGTNLRYSQVVPSDMFSEANTKTNLPAQIDLFATKGNEYNFMFIAKGGGSANKTFLFQQTKALLNPKSLLEFLEEKIKSLGTAACPPYHLSIVVGGLSAEMTLKTVKLASTKYLDNLPTAGDQSGTAFRDLEWEAEILKLTQDLGIGAQFGGKYFCHDVRVVRLPRHGASCPVGIGVSCSADRQCKAKITKEGIFIEKLETDVSKYMPDVNEGDLSSEVVQVDLNRPMDEIRNTLSQYPIRTRLSLTGTLVVARDIAHAKLLERIESGEGL 444
BLAST of mRNA_P-lacustris_contig96.15954.1 vs. uniprot
Match: A0A7R9UE20_9STRA (Fumarate hydratase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE20_9STRA) HSP 1 Score: 442 bits (1137), Expect = 9.490e-142 Identity = 215/293 (73.38%), Postives = 252/293 (86.01%), Query Frame = 1
Query: 589 QGVYDTYTKTNLRYSQVAPTDMFSEKNTGTNLPAQIDIFATPGNEYTFQFMAKGGGSANKTFLFQKTKALLNEKALEKFFLDEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLASSKYLDGLPTTGDASGRAFRDLEWEARVLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDEAQISPEVVHVDLNQPMDKIREFLGGYSVRTRLSLSGTIVVARDIAHAKLQERIDAGKGVAGLRQGPHHLLRWTG 1467
+GVYD Y + NLRYSQVAP DMF+E NT TNLPAQ+D++AT G+ Y F F+AKGGGSANKTFL+Q+TKALLNEK+LEKFFLDEIKTLGTAACPPYHLAIVIGGLSAE+TLKTVK+AS+KY DGLPT+G GRAFRD+E E +VL I + +GIGAQFGGKYFCHDVRV+RLPRHGASCPVGIGVSCSADRQ GKITSEG+FLE+LE DVG+YLP+V +++S EVV VDLNQPMD +RE L Y +RTRLSL+GTIVVARDIAHAKLQERI+ G+G+ + H++ + G
Sbjct: 180 RGVYDAYQEKNLRYSQVAPLDMFTEVNTKTNLPAQVDVYATSGDSYEFLFIAKGGGSANKTFLYQRTKALLNEKSLEKFFLDEIKTLGTAACPPYHLAIVIGGLSAEMTLKTVKMASTKYYDGLPTSGHELGRAFRDVEMEQKVLDITRNLGIGAQFGGKYFCHDVRVVRLPRHGASCPVGIGVSCSADRQVKGKITSEGIFLEQLETDVGKYLPDVSASELSAEVVQVDLNQPMDVLRETLSKYPIRTRLSLTGTIVVARDIAHAKLQERINNGEGLPDYVKD--HIIYYAG 470
BLAST of mRNA_P-lacustris_contig96.15954.1 vs. uniprot
Match: A0A150GZG4_GONPE (Fumarate hydratase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZG4_GONPE) HSP 1 Score: 437 bits (1124), Expect = 6.670e-141 Identity = 212/293 (72.35%), Postives = 252/293 (86.01%), Query Frame = 1
Query: 589 QGVYDTYTKTNLRYSQVAPTDMFSEKNTGTNLPAQIDIFATPGNEYTFQFMAKGGGSANKTFLFQKTKALLNEKALEKFFLDEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLASSKYLDGLPTTGDASGRAFRDLEWEARVLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDEAQISPEVVHVDLNQPMDKIREFLGGYSVRTRLSLSGTIVVARDIAHAKLQERIDAGKGVAGLRQGPHHLLRWTG 1467
+GV+ YT TNLRYSQVAP DMF+EKNTGTNLPAQID+FA PGN Y F F+AKGGGSANKT L+Q+TKA+LNE +L F LD++K+LGTAACPPYHLAIVIGGLSAE LKTVKLAS++YLDGLPT+G+A GRAFRDL+WE +VL++ +++GIGAQFGGKYFCHDVRVIRLPRHGASCPVG+GVSCSADRQALGKITSEGVFLE LER+ GQYLP+V E ++S EVV V+LNQPM + E L Y V+TRLSL+GT+VVARDIAHAKLQER+ AG+G+ + H++ + G
Sbjct: 102 KGVFRAYTSTNLRYSQVAPLDMFTEKNTGTNLPAQIDLFAAPGNTYDFLFVAKGGGSANKTSLYQQTKAVLNESSLSAFLLDKVKSLGTAACPPYHLAIVIGGLSAEQNLKTVKLASTRYLDGLPTSGNAQGRAFRDLDWEDKVLQMTRKLGIGAQFGGKYFCHDVRVIRLPRHGASCPVGVGVSCSADRQALGKITSEGVFLEALERNPGQYLPDVTEDKLSSEVVKVNLNQPMKSVLETLSKYPVKTRLSLTGTLVVARDIAHAKLQERLAAGQGLP--QYAKDHIIYYAG 392
BLAST of mRNA_P-lacustris_contig96.15954.1 vs. uniprot
Match: I2CRB8_NANGC (Fumarate hydratase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRB8_NANGC) HSP 1 Score: 430 bits (1106), Expect = 1.340e-139 Identity = 210/279 (75.27%), Postives = 243/279 (87.10%), Query Frame = 1
Query: 589 QGVYDTYTKTNLRYSQVAPTDMFSEKNTGTNLPAQIDIFATPGNEYTFQFMAKGGGSANKTFLFQKTKALLNEKALEKFFLDEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLASSKYLDGLPTTGDASGRAFRDLEWEARVLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDEAQIS-PEVVHVDLNQPMDKIREFLGGYSVRTRLSLSGTIVVARDIAHAKLQERIDAGKGV 1422
+GVYDTYT+TNLRYSQVAP DMF EKNT TNLPAQID++AT G+ Y F F+AKGGGSANKTFL+Q+TKALLN L KF ++IKTLGTAACPPYHLA+VIGGLSAEL LKTVKLAS+KYLD LPTTG+ GRAFRDLEWE ++ ++ Q MGIGAQ GGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQA GKIT EGVFLE+LERDVG+YLP+VDEA + EVV VDLN+PM +IR L Y ++TRL+L+GT+VVARDIAHAKL ER+++G+G+
Sbjct: 79 RGVYDTYTRTNLRYSQVAPLDMFQEKNTKTNLPAQIDLYATKGDAYNFLFLAKGGGSANKTFLYQQTKALLNPNGLMKFMDEKIKTLGTAACPPYHLAVVIGGLSAELNLKTVKLASTKYLDFLPTTGNEHGRAFRDLEWEEKIHQLTQRMGIGAQLGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQAKGKITKEGVFLEELERDVGKYLPDVDEATLEGAEVVKVDLNRPMAEIRATLSKYPIKTRLALTGTLVVARDIAHAKLLERVESGQGL 357
BLAST of mRNA_P-lacustris_contig96.15954.1 vs. uniprot
Match: D8UCM0_VOLCA (Fumarate hydratase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UCM0_VOLCA) HSP 1 Score: 433 bits (1114), Expect = 3.690e-139 Identity = 212/278 (76.26%), Postives = 244/278 (87.77%), Query Frame = 1
Query: 589 QGVYDTYTKTNLRYSQVAPTDMFSEKNTGTNLPAQIDIFATPGNEYTFQFMAKGGGSANKTFLFQKTKALLNEKALEKFFLDEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLASSKYLDGLPTTGDASGRAFRDLEWEARVLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDEAQISPEVVHVDLNQPMDKIREFLGGYSVRTRLSLSGTIVVARDIAHAKLQERIDAGKGV 1422
+GV+ YT TNLRYSQVAP DMF+EKNTGTNLPAQID+FA PGN Y F F+AKGGGSANKT L+Q+TKALLNE +L+ F +D+IK+LGTAACPPYHLAIVIGGLSAEL LK VKLAS++YLD LPT+G+A GRAFRDLEWE +VL I +E+GIGAQFGGKYFCHDVRVIRLPRHGASCPVG+GVSCSADRQALGKITSEGVFLE+LE + GQYLP+V E +S +VV VDLN+PM I E L + VRTRLSL+GT+VVARDIAHAKLQER+ AG+G+
Sbjct: 120 RGVFRAYTATNLRYSQVAPVDMFTEKNTGTNLPAQIDLFAAPGNTYDFLFIAKGGGSANKTSLYQQTKALLNEASLKSFLVDKIKSLGTAACPPYHLAIVIGGLSAELNLKVVKLASTRYLDTLPTSGNAYGRAFRDLEWEEKVLAITRELGIGAQFGGKYFCHDVRVIRLPRHGASCPVGVGVSCSADRQALGKITSEGVFLEQLETNPGQYLPDVTEDSLSADVVKVDLNRPMRAILEQLSSHPVRTRLSLTGTLVVARDIAHAKLQERLAAGQGL 397
BLAST of mRNA_P-lacustris_contig96.15954.1 vs. uniprot
Match: A8HYA9_CHLRE (Fumarate hydratase n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8HYA9_CHLRE) HSP 1 Score: 434 bits (1115), Expect = 1.880e-138 Identity = 209/293 (71.33%), Postives = 251/293 (85.67%), Query Frame = 1
Query: 589 QGVYDTYTKTNLRYSQVAPTDMFSEKNTGTNLPAQIDIFATPGNEYTFQFMAKGGGSANKTFLFQKTKALLNEKALEKFFLDEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLASSKYLDGLPTTGDASGRAFRDLEWEARVLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDEAQISPEVVHVDLNQPMDKIREFLGGYSVRTRLSLSGTIVVARDIAHAKLQERIDAGKGVAGLRQGPHHLLRWTG 1467
+GV+ YT TNLRYSQVAP DMFSEKNTGTNLPAQI++FA+PG+ Y FQF+AKGGGSANKT L+Q+TKALLNEK+L F D+IK+LGTAACPPYHLA+VIGGLSAE+ LKTVKLAS++YLD LPT+G+A GRA+RDLEWE R+L I +++GIGAQFGGKYFCHDVRVIRLPRHGASCPVG+GVSCSADRQALGKIT EGVFLE LER+ GQYLP+V Q+S +VV V+LN+PM ++ L + +RTRLSL+GT+VVARDIAHAKLQER+ AGKG+ + H++ + G
Sbjct: 182 RGVFRAYTSTNLRYSQVAPLDMFSEKNTGTNLPAQIELFASPGSSYDFQFIAKGGGSANKTSLYQQTKALLNEKSLTAFLTDKIKSLGTAACPPYHLAVVIGGLSAEMNLKTVKLASTRYLDTLPTSGNALGRAYRDLEWEGRLLDISRQLGIGAQFGGKYFCHDVRVIRLPRHGASCPVGVGVSCSADRQALGKITGEGVFLEALERNPGQYLPDVTHEQLSTDVVKVNLNRPMQEVLAQLSSFPIRTRLSLTGTLVVARDIAHAKLQERLAAGKGLP--QYAKDHIIYYAG 472
BLAST of mRNA_P-lacustris_contig96.15954.1 vs. uniprot
Match: A0A7R9WC09_9STRA (Fumarate hydratase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WC09_9STRA) HSP 1 Score: 431 bits (1108), Expect = 2.530e-138 Identity = 232/402 (57.71%), Postives = 278/402 (69.15%), Query Frame = 1
Query: 295 RRAGVSQGGAAGPGAALLHGDGRHCPSSQVQPPAAAGQDIRRP*GL*KRSIRRPGIVEKRKHRCGDGAPGLSGYRHRDHHGQEGAVRAYRWKRRGAPLQ----------GVYDTYTKTNLRYSQVAPTDMFSEKNTGTNLPAQIDIFATPGNEYTFQFMAKGGGSANKTFLFQKTKALLNEKALEKFFLDEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLASSKYLDGLPTTGDASGRAFRDLEWEARVLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDEAQISPEVVHVDLN-QPMDKIREFLGGYSVRTRLSLSGTIVVARDIAHAKLQERIDAGKGVAGLRQGPHHLLRWTG 1467
RR G+ G LLHG P + +A RRP GL +RSIR G ++R+H PG Q+ KR L G YD YT+ NLRYSQVAP DMF+EKNTG NLPAQ+D++ T GNEY F+AKGGGSANKTFL+Q+TKALLN +LE F + IKT+GT+ACPPYHLAIV+GGLSAELTLKTVKLAS+KYLD LPTTGD +GRAFRD WE +LK+ + +GIGAQFGGKYFCHDVRV+RLPRHGASCPVGIGVSCSADRQ GKIT EGVFLEKLE DVG+YLPEV + +S +VV +D+N MD++R L Y VRTRLSL+GTIVVARDIAHAKL E+I++G+G+ + H++ + G
Sbjct: 17 RRRGIPPGARGVSPYPLLHGLRGRGPPPPSEAFESASVHTRRPRGLLERSIRGHGTAQERQHASARVLPGC----------QDTGTAIVMGKRGHRVLTDGDDDSYLSGGAYDAYTELNLRYSQVAPLDMFAEKNTGCNLPAQVDVYGTKGNEYNLLFIAKGGGSANKTFLYQQTKALLNPGSLETFLEENIKTIGTSACPPYHLAIVVGGLSAELTLKTVKLASTKYLDDLPTTGDETGRAFRDTAWEDYILKMTRNLGIGAQFGGKYFCHDVRVVRLPRHGASCPVGIGVSCSADRQVKGKITKEGVFLEKLEEDVGKYLPEVSDEDLSDDVVKIDMNGMSMDELRAKLSEYPVRTRLSLTGTIVVARDIAHAKLLEKIESGEGLP--QYAKDHIIYYAG 406
BLAST of mRNA_P-lacustris_contig96.15954.1 vs. uniprot
Match: W7TSQ3_9STRA (Fumarate hydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSQ3_9STRA) HSP 1 Score: 432 bits (1112), Expect = 2.540e-138 Identity = 211/279 (75.63%), Postives = 244/279 (87.46%), Query Frame = 1
Query: 589 QGVYDTYTKTNLRYSQVAPTDMFSEKNTGTNLPAQIDIFATPGNEYTFQFMAKGGGSANKTFLFQKTKALLNEKALEKFFLDEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLASSKYLDGLPTTGDASGRAFRDLEWEARVLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDEAQIS-PEVVHVDLNQPMDKIREFLGGYSVRTRLSLSGTIVVARDIAHAKLQERIDAGKGV 1422
+GVYDTYT+TNLRYSQVAP DMF EKNT TNLPAQID++AT G+ Y F F+AKGGGSANKTFL+Q+TKALLN L KF ++IKTLGTAACPPYHLA+VIGGLSAEL LKTVKLAS+KYLD LPTTG+ GRAFRDLEWE ++ ++ Q MGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQA GKIT EGVFLE+LERDVG+YLP+VDEA + EVV VDLN+PM +IR L Y ++TRL+L+GT+VVARDIAHAKL ER+++G+G+
Sbjct: 158 RGVYDTYTRTNLRYSQVAPLDMFQEKNTKTNLPAQIDLYATKGDAYNFLFLAKGGGSANKTFLYQQTKALLNPNGLMKFMDEKIKTLGTAACPPYHLAVVIGGLSAELNLKTVKLASTKYLDFLPTTGNEHGRAFRDLEWEEKIHQLTQRMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQAKGKITKEGVFLEELERDVGKYLPDVDEATLEGAEVVKVDLNRPMAEIRATLSKYPIKTRLALTGTLVVARDIAHAKLLERVESGQGL 436
BLAST of mRNA_P-lacustris_contig96.15954.1 vs. uniprot
Match: A9UZD6_MONBE (Fumarate hydratase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UZD6_MONBE) HSP 1 Score: 432 bits (1111), Expect = 4.600e-138 Identity = 208/295 (70.51%), Postives = 252/295 (85.42%), Query Frame = 1
Query: 589 QGVYDTYTKTNLRYSQVAPTDMFSEKNTGTNLPAQIDIFATPGNEYTFQFMAKGGGSANKTFLFQKTKALLNEKALEKFFLDEIKTLGTAACPPYHLAIVIGGLSAELTLKTVKLASSKYLDGLPTTGDASGRAFRDLEWEARVLKICQEMGIGAQFGGKYFCHDVRVIRLPRHGASCPVGIGVSCSADRQALGKITSEGVFLEKLERDVGQYLPEVDEAQISP--EVVHVDLNQPMDKIREFLGGYSVRTRLSLSGTIVVARDIAHAKLQERIDAGKGVAGLRQGPHHLLRWTG 1467
+GV++ YT+ NLRYSQVAP DMF EKNTG+NLPAQI++++TPGNEY FQFMAKGGGSANKTFLFQ+TKA+LNEK LE+F ++IKTLGTAACPPYHLAIVIGGLSAE+ LKTVK+AS++Y D L T+G+ GRAFRDLEWE R+ K+ Q +GIGAQFGGKYFCHDVRVIRLPRHGASCP+GIGVSCSADRQALGKIT EGVF+E LE + GQYLPEV E+ + EVV ++LNQPM+ IR+ L Y +RTRLSL+G ++VARDIAHAKLQERID+G+G+ + +H++ + G
Sbjct: 165 RGVFNAYTRRNLRYSQVAPLDMFQEKNTGSNLPAQIELYSTPGNEYHFQFMAKGGGSANKTFLFQQTKAVLNEKKLEQFLEEKIKTLGTAACPPYHLAIVIGGLSAEMNLKTVKMASTRYYDNLHTSGNEMGRAFRDLEWEERIHKLTQNLGIGAQFGGKYFCHDVRVIRLPRHGASCPIGIGVSCSADRQALGKITKEGVFIEALETNPGQYLPEVTESDLGDKAEVVKINLNQPMEDIRKQLSSYPIRTRLSLTGKLIVARDIAHAKLQERIDSGEGLPDYIK--NHIIYYAG 457 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig96.15954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig96.15954.1 >prot_P-lacustris_contig96.15954.1 ID=prot_P-lacustris_contig96.15954.1|Name=mRNA_P-lacustris_contig96.15954.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=204bp MASLRLKRGLDFLARDAFIGHRRATARVASFSAAAPRSPATEAARMVKPQback to top mRNA from alignment at P-lacustris_contig96:110160..127206+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig96.15954.1 ID=mRNA_P-lacustris_contig96.15954.1|Name=mRNA_P-lacustris_contig96.15954.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=17047bp|location=Sequence derived from alignment at P-lacustris_contig96:110160..127206+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig96:110160..127206+ >mRNA_P-lacustris_contig96.15954.1 ID=mRNA_P-lacustris_contig96.15954.1|Name=mRNA_P-lacustris_contig96.15954.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1224bp|location=Sequence derived from alignment at P-lacustris_contig96:110160..127206+ (Pleurocladia lacustris SAG_25_93)back to top |