mRNA_P-lacustris_contig948.15859.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig948.15859.1 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE) HSP 1 Score: 400 bits (1029), Expect = 2.140e-131 Identity = 186/288 (64.58%), Postives = 226/288 (78.47%), Query Frame = 1
Query: 187 KNLPTLSPNATCADWAAWVPPRSDPAVVMQVVSKDYLDVQLNFIRFMELNSSFTRDHLYIMCMDEESLEYMSSSMGIRCLPLSGFDFPSHAQIWILRVKVVSCLVEAGQDVLMSDADALWLGDPAKDFANPRIVGSSIVASRGSFPSQLGSKWGSTICMGFALFRGRDTHAMQKFLTIMSELVHVLMDDQKSVNMAADDLGIVWDQGSDMRYERSTDIGWGTIDSLVDEDGRPFIVTLLPHVAYTRRCDKTPISNTTVVAHCYADKTSSAKTEWMQDAHLWFVGEENR 1050
+ LP ++P ATCADW W+PPRSDPA+VMQVVS+ YL+++ NFIR MELNS+ TRDHLY+MCMD S+ + SSM IRC+PL+ FDFPSHA+IW+LR +VVSCLVEAGQDV+MSDADALWL DP KDF PR++ SS+VASRG FP LG +WG+T+CMGF LFR + +FL +M LVH DDQ SVN+AA++LGIVWDQ SDMRY S G+GTID+LVDE+ +PF VTLLPH AYTR CD+TPISN TVVAHC+A KT+ +KT WM + LWF E R
Sbjct: 33 RRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAPKTADSKTGWMVQSKLWFSDNETR 320
BLAST of mRNA_P-lacustris_contig948.15859.1 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI) HSP 1 Score: 314 bits (805), Expect = 1.250e-97 Identity = 167/326 (51.23%), Postives = 210/326 (64.42%), Query Frame = 1
Query: 154 TAAVSVMVSPMKNLPTLSPNATCADWAAWVPPRSDPAVVMQVVSKDYLDVQLNFIRFMELNSSFTRDHLYIMCMDEESLEYMSSSMGIRCLPLSGFDFPSHAQIWILRVKVVSCLVEAGQ-DVLMSDADALWLGDPAKDFANPRIVG-SSIVASRGSFPSQLGSKWGSTICMGFALFRGRDTHAMQKFLTIMSELVHVLMDDQKSVNMAADDLGIVWDQGSDMRYERSTDIGWGTI---------------DSLVDEDGR-------------PFIVTLLPHVAYTRRCDKTPISN-TTVVAHCY-ADKTSSAKTEWMQDAHLWFV 1035
T + + ++ LP ++ +ATC DWAAW+PPRS PAVVMQVVS+ Y+D++ NFIR ME NS FTR ++Y+MCMD+ S + + MGIRC+P+S D P+H IW LRV+VVSCL+E G DV+MSDADALWL DPAKD + G IVASRGS+P+ +WGST+CMGF LFR R+ M++FL +M++LV DDQ SVN AA LGIVWD+ SDMRYE ST G G I D + + G PF VTLLPH AYTR C + +SN TTVVAHCY K + KT WM+ A+LW V
Sbjct: 14 TELIDPEIYDLETLPAITKDATCVDWAAWIPPRSRPAVVMQVVSEGYIDIERNFIRLMERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPMSALDLPTHEHIWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFSRGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFRARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKNSDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWSV 339
BLAST of mRNA_P-lacustris_contig948.15859.1 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE) HSP 1 Score: 285 bits (728), Expect = 3.490e-86 Identity = 142/286 (49.65%), Postives = 195/286 (68.18%), Query Frame = 1
Query: 193 LPTLSPNATCADWAAWVPPRSDPAVVMQVVSKDYLDVQLNFIRFMELNSSFTRDHLYIMCMDEESLEYMSSSMGIRCLPLSGFDFP-SHAQIWILRVKVVSCLVEAGQDVLMSDADALWLGDPAKDFANPRIVGSSIVASRGSFPSQLGSKWGSTICMGFALFRGRDTHAMQKFLTIMSELVHVLMDDQKSVNMAADDLGIVWDQGSDMRYERSTDIGWGTIDSLVDEDGRPFIVTLLPHVAYTRRCDKTPISNTTVVAHCYADKTSSAKTEWMQDAHLWFVGEEN 1047
LP ++ +++C+D AW+PPRS PAVV QVVS+ Y ++ NFI MEL+S+F+R++LY++C+DEES+ +GIRC+ P S +W+LRV+ CL+ AGQDVLMSDADA+WL DP DFA+ + S++VASR P L KWG+T+CMGFA FR + AMQ F+T++ E+V+ L DDQK+VN A D LG+VWD SDM + ST G G I+++ +G P VTLLPH YTR C +TPISN T+VAHC + WM++AHLW + ++N
Sbjct: 61 LPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEANFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPMSRLDVWVLRVEATLCLLNAGQDVLMSDADAIWLRDPTNDFASDLNMDSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGGS-AMQAFMTVVGEIVNELGDDQKAVNEALDKLGVVWDPTSDMDFTNSTRPGTGVIENIT-ANGDPLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPDDN 343
BLAST of mRNA_P-lacustris_contig948.15859.1 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI) HSP 1 Score: 270 bits (690), Expect = 1.270e-79 Identity = 137/286 (47.90%), Postives = 190/286 (66.43%), Query Frame = 1
Query: 193 LPTLSPNATCADWAAWVPPRSDPAVVMQVVSKDYLDVQLNFIRFMELNSSFTRDHLYIMCMDEESLEYMSSSMGIRCLPLSGFDFP-SHAQIWILRVKVVSCLVEAGQDVLMSDADALWLGDPAKDFANPRIVGSSIVASRGSFPSQLGSKWGSTICMGFALFRGRDTHAMQKFLTIMSELVHVLMDDQKSVNMAADDLGIVWDQGSDMRYERSTDIGWGTIDSLVDEDGRPFIVTLLPHVAYTRRCDKTPISNTTVVAHCYADKTSSAKTEWMQDAHLWFVGEEN 1047
LP ++ +++C+D AW+PPRS PAVV QVVS+ Y ++ NFI MEL+S+F+R++LY++C+DEES+ +GIRC+ P S IW+LR+ V CL+ AGQDVLMSDADA+WL DP D A+ + S++VASR P L KWG+TICMGFA FR + AMQ F+T++ E+ + L +DQ +VN A + L +VWD SDM + +T G G I+++ DG VTLLPH YTR C +TPISN T+VAHC + WM++AHLW + ++N
Sbjct: 136 LPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEENFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPVSRGDIWVLRIDVTICLLNAGQDVLMSDADAIWLRDPTDDLASDAFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGGS-AMQAFMTVVEEIANELGNDQIAVNEALNKLDVVWDPMSDMNFTDNTRPGTGVIENIT-VDGGSLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWNLPDDN 418
BLAST of mRNA_P-lacustris_contig948.15859.1 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI) HSP 1 Score: 261 bits (667), Expect = 1.610e-76 Identity = 136/283 (48.06%), Postives = 187/283 (66.08%), Query Frame = 1
Query: 202 LSPNATCADWAAWVPPRSDPAVVMQVVSKDYLDVQLNFIRFMELNSSFTRDHLYIMCMDEESLEYMSSSMGIRCLPLSGFDFP-SHAQIWILRVKVVSCLVEAGQDVLMSDADALWLGDPAKDFANPRIVGSSIVASRGSFPSQLGSKWGSTICMGFALFRGRDTHAMQKFLTIMSELVHVLMDDQKSVNMAADDLGIVWDQGSDMRYERSTDIGWGTIDSLVDEDGRPFIVTLLPHVAYTRRCDKTPISNTTVVAHCYADKTSSAKTEWMQDAHLWFVGEEN 1047
+S +A+CAD AW+PP+ PAVV QVVSK Y+ VQ NFI MEL+S+F+R+++Y++C+DEES+E + +GIRC+ P S +W LR++V CL++AG DVLMSDADA+WL DP DF + SSIVASRG+ P L WG+TICMGF LFR ++A+ +F+ ++ E L +DQ++VN+A L +VWD SDM + ST G G ++S+ G V+LLPH YTR C +TPIS TVVAHC + WM++AHLW V ++N
Sbjct: 122 ISRHASCADIVAWLPPQLQPAVVFQVVSKAYVSVQKNFISNMELHSTFSRENMYLICLDEESVESFGA-LGIRCVRFGCMGCPVSRHHVWALRIEVSVCLLKAGIDVLMSDADAVWLHDPMDDFDSDDYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRA-GSNAIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPTSDMSFSDSTRSGVGVVNSIYS--GESLTVSLLPHNKYTRSCRRTPISVETVVAHCISTDKGEGMATWMKEAHLWNVPDDN 400
BLAST of mRNA_P-lacustris_contig948.15859.1 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI) HSP 1 Score: 244 bits (622), Expect = 5.070e-72 Identity = 141/302 (46.69%), Postives = 168/302 (55.63%), Query Frame = 1
Query: 151 TTAAVSVMVSPMKNLPTLSPNATCADWAAWVPPRSDPAVVMQVVSKDYLDVQLNFIRFMELNSSFTRDHLYIMCMDEESLEYMSSSMGIRCLPLSGFDFPSHAQIWILRVKVVSCLVEAGQDVLMSDADALWLGDPAKDFANPRIVGSSIVASRGSFPSQLGSKWGSTICMGFALFRGRDTH-AMQKFLTIMSELVHVLMDDQKSVNMAADDLGIVWDQ-GSDMRYERSTDIGWGTIDSLVDEDGRPFIVTLLPHVAYTRRCDKTPISNTTVVAHCYADKTSSAKTEWMQDAHLWFVGEENR 1050
T VS+ + P++ LP +SP A CADWAAWVPP S P VVMQV EAG DV+MSDADALWL DP KDF+ P +VGSSIVASRGSFP ++G WG+TICMGF LFR + AM++F+T+M+ LV DDQ +VN+AA DLGIVW+Q SDMRY ST G G IDSL D+D +PF VTLLPH AYTR C TP+SNTTVVAHC + KT +K +WM LW V E+ R
Sbjct: 22 TAKNVSLDLLPLEPLPAISPEAVCADWAAWVPPMSGPTVVMQV--------------------------------------------------------------------------EAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWAVDEDTR 249
BLAST of mRNA_P-lacustris_contig948.15859.1 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE) HSP 1 Score: 201 bits (512), Expect = 6.790e-55 Identity = 112/255 (43.92%), Postives = 143/255 (56.08%), Query Frame = 1
Query: 265 VVMQVVSKDYLDVQLNFIRFMELNSSFTRDHLYIMCMDEESLEYMSSSMGIRCLPLSGFDFPSHAQIWILRVKVVSCLVEAGQ-DVLMSDADALWLGDPAKDFANPRIVG-SSIVASRGSFPSQLGSKWGSTICMGFALFRGRDTHAMQKFLTIMSELVHVLMDDQK-----------------------------------------------------SVNMAADDLGIVWDQGSDMRYERSTDIGWGTIDSL 864
+ + VVS+ Y+D++ NFIR ME NS FTR ++Y+MCMD S + + MGIRC+P+S D P+H IW LRVKVVSCL+E G DV+MSDADALWL DPAKD + G I+ASRGS+P++ +WGST+CMGF +FR R+ M++FL +M++LV DDQ SVN AA LGIVWD+ SDMRYE ST G G I L
Sbjct: 1 MTVPVVSEGYIDIERNFIRLMERNSGFTRSNIYLMCMDGASKNFFDAKMGIRCVPMSALDLPTHQDIWQLRVKVVSCLLEVGHVDVIMSDADALWLADPAKDLFSRGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFRARNVAGMKRFLDVMADLVVQNKDDQMLCECATGVENDFCGFPASSRPRSNPTLTESAFCVAAPSPNASLILSIVSVEKISVNRAAKQLGIVWDKNSDMRYEESTGYGRGVIAGL 255
BLAST of mRNA_P-lacustris_contig948.15859.1 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI) HSP 1 Score: 189 bits (481), Expect = 5.990e-53 Identity = 90/150 (60.00%), Postives = 113/150 (75.33%), Query Frame = 1
Query: 325 MELNSSFTRDHLYIMCMDEESLEYMSSSMGIRCLPLSGFDFPSHAQIWILRVKVVSCLVEAGQDVLMSDADALWLGDPAKDFANPRIVGSSIVASRGSFPSQLGSKWGSTICMGFALFRGRDTH-AMQKFLTIMSELVHVLMDDQKSVNM 771
MEL +SFTR+HLY+MC+D++SL + S MGI C+PLSG + SH QIW+LRV+VVSCL EAG DV+MSDADALWL DP KDF+ P ++ SSIVASRG P ++G WG+T+CMGF LFR AM KF+T+M+ LV DDQ +V M
Sbjct: 1 MELRTSFTRNHLYLMCLDDDSLHFFESFMGIHCIPLSGLNISSHEQIWVLRVRVVSCLAEAGHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAVCM 150
BLAST of mRNA_P-lacustris_contig948.15859.1 vs. uniprot
Match: A0A8J6CCA2_DIALT (Nucleotid_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCA2_DIALT) HSP 1 Score: 114 bits (285), Expect = 5.220e-24 Identity = 90/283 (31.80%), Postives = 139/283 (49.12%), Query Frame = 1
Query: 217 TCADWAAWVPPRSD---PAVVMQVVSKDYLDVQLNFIRFMELNSSFTRDHLYIMCMDEESLEYMSSSMGIRCLPLSGFDFPSHAQIWILRVKVVSCLVEAGQDVLMSDADALWLGDPAKDFANPRIVGSSIVASRGSFPSQLGSKWGSTICMGFALFRGRDTHAMQKFLTIMSELVHVLMDDQKSVNMAADDLGIVWDQGSDMRYERSTDIGWGTIDSLVDEDGRPFI-VTLLPHVAYTRRCDKTPISNTTVVAHCYA-DKTSSAKTEWMQDAHLWFVGEENR 1050
T A A+ VPP P VVM V++ Y V NFIR + + +I+C D + ++ +G RC S AQ++ R+ V+ LV G+DVL++D DA+WLGDP D + + I+ SRG P WG+++CMGF FRG D M L + +DQ N +VWD+G +R+ S D +GT+ G + V +LPH +Y R C+ +T ++AHC++ K + K + + +LW++ E+ R
Sbjct: 32 TGAPVASLVPPVPGVPRPVVVM-VLNSAYTRVFENFIRAPGAHHLAAWE-THIICTDRATAVSLAK-LGWRCQDTVKTG-RSAAQVYTRRIPYVAHLVHLGRDVLITDVDAIWLGDPLPDIMATQ---AGIIGSRGRSPHL---DWGASLCMGFIFFRGSDPLVR----AAMPVLTEPMREDQTDFNHNMQRERLVWDEGR-VRFVDSIDTSFGTLRPKNANAGHAGLRVAMLPHKSYVRICEDKVDYSTVIIAHCHSRGKRAHLKVQSLGAKNLWYIPEKGR 299
BLAST of mRNA_P-lacustris_contig948.15859.1 vs. uniprot
Match: A0A482S212_9ARCH (Nucleotid_trans domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S212_9ARCH) HSP 1 Score: 85.5 bits (210), Expect = 5.680e-14 Identity = 63/243 (25.93%), Postives = 102/243 (41.98%), Query Frame = 1
Query: 463 IWILRVKVVSCLVEAGQDVLMSDADALWLGDPAKDFANPRIVGSSIVASRGSFPSQLGSKWGSTICMGFALFRG---------------RDTHAM----QKFL--------------------TIMSELVHVLMDDQKSVNMAADDLGIVWDQGSDMRYERSTDIGWGTIDSLVDEDGRPFIVTLLPHVAYTRRC---DKTPIS--------------------NTTVVAHCYADKTSSAKTE 1005
IW+ R+++VS L++ G+DVL+SD DA+WL +P D ++ GSSI++SR ++P ++ WG ++CMGF + + T+AM +KFL + + + DDQ S N+ L I WD+ + + + ++ +G VT+LP + R C D P S + VAHC T + K E
Sbjct: 5 IWMKRLEIVSVLLQRGEDVLLSDLDAIWLQNPYADISSHLQAGSSIISSRATYPEEISRVWGRSLCMGFLYLKSDNFTNYLLPLVLADMQSTYAMFNLYEKFLRTGNLVYLDTKKNTTMVFDRAVFTSMSKKAPDDQHSFNIVLYKLNITWDR----QMRKHVNASQSYSGRIMGMNGSVNYVTMLPEQTFLRSCVDIDHLPASMRYFKLYPTVELRERIYHKVSAATVAHCLISTTEAKKKE 243 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig948.15859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig948.15859.1 >prot_P-lacustris_contig948.15859.1 ID=prot_P-lacustris_contig948.15859.1|Name=mRNA_P-lacustris_contig948.15859.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=312bp MVSPMKNLPTLSPNATCADWAAWVPPRSDPAVVMQVVSKDYLDVQLNFIRback to top mRNA from alignment at P-lacustris_contig948:34046..38284- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig948.15859.1 ID=mRNA_P-lacustris_contig948.15859.1|Name=mRNA_P-lacustris_contig948.15859.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4239bp|location=Sequence derived from alignment at P-lacustris_contig948:34046..38284- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig948:34046..38284- >mRNA_P-lacustris_contig948.15859.1 ID=mRNA_P-lacustris_contig948.15859.1|Name=mRNA_P-lacustris_contig948.15859.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1872bp|location=Sequence derived from alignment at P-lacustris_contig948:34046..38284- (Pleurocladia lacustris SAG_25_93)back to top |