mRNA_P-lacustris_contig945.15840.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig945.15840.1 vs. uniprot
Match: A0A6H5J907_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J907_9PHAE) HSP 1 Score: 568 bits (1463), Expect = 7.610e-188 Identity = 315/374 (84.22%), Postives = 335/374 (89.57%), Query Frame = 2
Query: 1079 SAERRGSGLALDQGERSLLVLNRHEMCAELERLARTLGMPDPARNGGRACVGMVGYPNVGKSSLINVLVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDNLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDAKDTGGKAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPPTLTPEATARFLKETHTTALKTTKLAAKLAVQXXXXXXXXXXXXXXXGTAEAAALLQPENVNLMAEVLEKRGAVAARDAELGPAGGAGVGGGGRKPTRREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGAKVAGGGKRGAGVRRR 2200
SA RRGSG + +G++SL VL+R EMC ELERLARTLG PDP+RNGGRACVGMVG+PNVGKSSLINV+VGATPLSHGGVRVSVGATPGKTKHFQTLVLSD+LMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGD +DT G AMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPP L EA RFLKET TALKTTKLAAK XXXXXXXXXXXXX +AEAA+L QPEN++LMAEVLEKR AVAAR+AELG GAG GG K T+REMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGA+VAGGGK+G ++R
Sbjct: 331 SAGRRGSGTDVGKGDKSLQVLSRLEMCVELERLARTLGTPDPSRNGGRACVGMVGFPNVGKSSLINVMVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDSLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDVRDTAGNAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPADLESEAITRFLKETDKTALKTTKLAAKXXXXXXXXXXXXXXXXXAVASAEAASLKQPENIDLMAEVLEKRAAVAAREAELGLTVGAGGRGG--KLTKREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGARVAGGGKKGRRGKKR 702
BLAST of mRNA_P-lacustris_contig945.15840.1 vs. uniprot
Match: A0A835YPB7_9STRA (Lsg1, cytoplasmic GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB7_9STRA) HSP 1 Score: 285 bits (728), Expect = 8.480e-80 Identity = 180/370 (48.65%), Postives = 221/370 (59.73%), Query Frame = 2
Query: 1136 VLNRHEMCAELERLARTLGMPDPARNG----GRACVGMVGYPNVGKSSLINVLVGATPLSHGGV-RVSVGATPGKTKHFQTLVLSDNLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDAKDTGGKAML----------------SPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPPTLTPEAT-ARFLKETHTTALKTTKLAAKLAVQXXXXXXXXXXXXXXXGTAEAAALLQPENVNLMAEVLEKRGAVAARDAELGPAGGAGVGGGGRKPTRREMGLLRWGKKDRKVGNKDPYGNPDVETAASLGPVGAKVAGGGKR 2179
VL+R E+ +E LAR+LG AR+ GRACVGMVGYPNVGKSS+IN L GATP SHG RVSVGATPGKTKHFQTL LS +L+LCDCPGLVFPSFVSS AEMICAGVLPIMQMR+ + P+AL+ARR+PRHILE+TYTI + ++L ++C++RGL+R LG+ D+PRAAR +LKD+T+G LLFCHPPP L+ A A FL+ET T L + +LAAKLA Q G + A E + E L R + AR E+ A + G PT+ E G RWGKK +K + PY N E A+ GA V GGK+
Sbjct: 362 VLSREELLHVIEHLARSLGAASAARSAERHHGRACVGMVGYPNVGKSSVINALAGATPFSHGATARVSVGATPGKTKHFQTLALSPSLLLCDCPGLVFPSFVSSAAEMICAGVLPIMQMRDALAPIALVARRVPRHILELTYTIXXXXXXXXXXXXXXXXXXXXXXXXXXXALATRPPTATEVLTAFCESRGLYRPGGLGDYDLPRAARMLLKDYTEGTLLFCHPPPDLSDAAAVAAFLRETERTHLSSGRLAAKLAEQQRKAY----------GASSAQQQGGGEGGVVDGEALTAR--LKARADEIRAREAAAMDG----PTKVEQGFKRWGKKSKKYRDPTPYAN--WEGGAAAAARGASVQRGGKK 713
BLAST of mRNA_P-lacustris_contig945.15840.1 vs. uniprot
Match: A0A7S2V0G3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G3_9STRA) HSP 1 Score: 211 bits (536), Expect = 2.070e-57 Identity = 122/238 (51.26%), Postives = 151/238 (63.45%), Query Frame = 2
Query: 1235 MVGYPNVGKSSLINVLVGATPLSHGGVRVSVGATPGKTKHFQTLVL--------------------------------SDNLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDAKDTGGKAM-LSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGR-LLFCHPPPTLTPEATARFLKETHTTALKTTKLAAKLAVQ 1846
MVGYPNVGKSS+INVL G TP SHG VRV VGATPGKTKHFQTL + S L LCDCPGLVFPSFV+ST EMICAGVLPI QMR P+ LIA RIPRHI E+TYT++ P + ++ G+ L+ +LLE +CQ R F A G+ D RA+R +L+D+T+G+ LLFCHPPP+L+P FL++T T + K+AAKLA++
Sbjct: 1 MVGYPNVGKSSVINVLAGVTPSSHGSVRVGVGATPGKTKHFQTLNVPLPGGPGVPPXXXXXXXXXXXXXXXXXXPTSDSGMLTLCDCPGLVFPSFVASTGEMICAGVLPINQMREHRGPVGLIASRIPRHIFELTYTLRFPREGEEEEEAAGEGRPLTATELLEVFCQTRHYFMG-ASGQVDEQRASRYLLQDYTEGKVLLFCHPPPSLSPPEVKDFLEDTTGTMARFGKVAAKLALE 237
BLAST of mRNA_P-lacustris_contig945.15840.1 vs. uniprot
Match: A0A7R9UCU9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCU9_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.880e-54 Identity = 121/243 (49.79%), Postives = 151/243 (62.14%), Query Frame = 2
Query: 1130 LLVLNRHEMCAELERLART----LGMPDPARNGGRACVGMVGYPNVGKSSLINVLVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDN--------------LMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDAKDT--GGKAML---------------SPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPP 1753
+ +L + E+ +L LAR P R A +GMVG+PNVGKSS+INVLVGA+ HG VRV+VGATPGKTKHFQTL+L D L LCDCPGLVFPSFVSSTAEMICAGVL + MR+ + P+ALIARRIPRH+LE TYTI++ G T G + L + Q+LL++YC+ARG A G +D+ R AR I+ +T G+LL+CHPPP
Sbjct: 67 IAILTKAELLGKLGHLAREHHRQFAGPSSTRP---ATIGMVGFPNVGKSSVINVLVGASKFVHGNVRVAVGATPGKTKHFQTLMLQDEAENPTDEVTAEQPALQLCDCPGLVFPSFVSSTAEMICAGVLQVNTMRDPIAPVALIARRIPRHVLESTYTIQIHSDEGAPVGTEAGNVSTLQTEEERRAEFEDRFPTAQELLKAYCEARGFLTAGG-GVADVNRGARDIILAYTSGKLLYCHPPP 305
BLAST of mRNA_P-lacustris_contig945.15840.1 vs. uniprot
Match: A0A7S2PA07_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PA07_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.170e-53 Identity = 133/326 (40.80%), Postives = 185/326 (56.75%), Query Frame = 2
Query: 1166 LERLARTLGMPDPARNGGRACVGMVGYPNVGKSSLINVLVGATPLSHGGVRVSVGATPGKTKHFQTLVLSD--NLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPV-LPGDAKDTG--GKAMLSP--QQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPPTLTPEATA----RFLKETHTTALKTTKLAAKLAVQXXXXXXXXXXXXXXXGTAEAAALLQPENVNLMAEVLEKRGAVAARDAELGPAGGAGVGGGGRKPTRREMGLLRWGKKDRKVGNKDPYG 2110
L+ A++ G + R GMVG+PNVGKSS+INVLVG++ HGGVRV+V A PGKTKHFQTL+L D ++MLCDCPGLVFPSFVSSTA+MI AGV PI QMR+ P ++LI +R+PR +L Y + +P + K+ G GK + P ++LL +YC R + A A G D RA+R ++KD+++G+LL+CH PP L + + + +ET TTA+K T K A A + EN+ + E + A+ + + G K + + +WGKK RK+ NKDPYG
Sbjct: 4 LDSFAKSHGCEPEEKFDNRIQYGMVGFPNVGKSSVINVLVGSSKAIHGGVRVAVAAQPGKTKHFQTLLLPDRSDMMLCDCPGLVFPSFVSSTADMIAAGVYPIAQMRDHWPVVSLICKRVPREVLNTHYGMHIPEPTKQELKEKGWTGKDLPPPTAEELLGTYCIVRSML-AAASGVPDYQRASRHVVKDYSEGKLLYCHSPPALKGDDSIMNNEEYQRETLTTAIKNTNNLKKKEKMEQ---------------AIEMAAAKKENMVDVEEDFDDFDAIFGDEIDRPTEGD--------KRGKSHKKIKQWGKKGRKLRNKDPYG 305
BLAST of mRNA_P-lacustris_contig945.15840.1 vs. uniprot
Match: A0A1V9ZAV8_9STRA (Large subunit GTPase 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAV8_9STRA) HSP 1 Score: 206 bits (525), Expect = 4.080e-53 Identity = 118/219 (53.88%), Postives = 146/219 (66.67%), Query Frame = 2
Query: 1133 LVLNRHEMCAEL----ERLARTLGMPDPARNGGRACVGMVGYPNVGKSSLINVLVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDNLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDAKDTGGKAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPPTLTPEATA 1777
+VL R E+ A L ER+ +G+ A + G GMVG+PNVGKSS IN L+GA+ SH RV+VGATPGKTKHFQT++LSD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP L+ARRIPR + E TY IK+P P K T + LLE Y +ARG F G D RAAR +L+D+ GRLL+CHPPP + P A
Sbjct: 295 VVLTREELLAYLNGRAERVTARVGLR--AEDKGLVKFGMVGFPNVGKSSAINALLGASNYSHHTQRVAVGATPGKTKHFQTMILSDKIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRLVFESTYGIKVP-FPNSGKYTDP---VDVYVLLEVYARARG-FATAGKGGPDQSRAARVLLRDYVMGRLLYCHPPPGVAPTTPA 506
BLAST of mRNA_P-lacustris_contig945.15840.1 vs. uniprot
Match: W7U9F1_9STRA (Lsg1p n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9F1_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.720e-52 Identity = 112/220 (50.91%), Postives = 147/220 (66.82%), Query Frame = 3
Query: 192 RGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVL--GPDGIEMSLDENGEINAAASGKDGGTDEFDFDHMNVPRRPAWGADMTAEDLDYLEKKSFLEWRRGIANAEENNVDM-KVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAKELMPPKPMIVVVNKADYLSRAQQQEWVQHFEGRGVAVLFFSARQQQEQLNKEAREGR 842
R +++SVLE ++LDDF+ +AMM++R F + KE +++ G S+ G++ G D G F F + VPRRP W M+A LD EK SFLEWRR IA EE + + KVTPFEKNLEVWRQLWRV+ERS ++ Q+VDAR+PLFYYS DL AYA E+ P + +V+VNKADYL+ AQ+ EW +F+ RG FFSAR QE L +AR+ R
Sbjct: 23 RKQLSSVLEMNSLDDFLDTAMMAQRDFSAIKERDLLVLDAKTGGLTSILPRGQV---TPGTDKGMTTFAFRQLKVPRRPKWHTGMSAAALDRAEKASFLEWRREIAQLEETSGERAKVTPFEKNLEVWRQLWRVLERSHVIVQIVDARDPLFYYSEDLHAYAAEMHPARECLVLVNKADYLTPAQRGEWAAYFQKRGWNHAFFSARSAQELLTVQARKER 239
BLAST of mRNA_P-lacustris_contig945.15840.1 vs. uniprot
Match: A0A485KVN8_9STRA (Aste57867_12475 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVN8_9STRA) HSP 1 Score: 204 bits (518), Expect = 3.320e-52 Identity = 108/182 (59.34%), Postives = 133/182 (73.08%), Query Frame = 2
Query: 1232 GMVGYPNVGKSSLINVLVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDNLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDAKDTGGKAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPPTLTPEATA 1777
GMVG+PNVGKSS IN L+GA+ +H RV+VGATPGKTKHFQTLVLSD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP L+ARRIPR + E TY IK+PV P K + S +LE Y +ARG F G D RAARQ+L+D+ +G+LL+CHPPP ++P A
Sbjct: 331 GMVGFPNVGKSSAINALLGASNYAHHAQRVAVGATPGKTKHFQTLVLSDAIMLCDCPGLVFPSFVNSKAEMLCCGVLPISQLRDHVPPCELVARRIPRVVFEKTYGIKVPV-PNTGKYNDDVDVYS---VLEVYARARG-FTTTGKGGPDTSRAARQLLRDYVNGKLLYCHPPPGVSPTTAA 507
BLAST of mRNA_P-lacustris_contig945.15840.1 vs. uniprot
Match: A0A024TX60_9STRA (CP-type G domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TX60_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.170e-51 Identity = 114/222 (51.35%), Postives = 149/222 (67.12%), Query Frame = 2
Query: 1106 ALDQGERSLLVLNRHEMCAELERLARTL----GMPDPARNGGRACVGMVGYPNVGKSSLINVLVGATPLSHGGVRVSVGATPGKTKHFQTLVLSDNLMLCDCPGLVFPSFVSSTAEMICAGVLPIMQMRNVMPPMALIARRIPRHILEITYTIKLPVLPGDAKDTGGKAMLSPQQLLESYCQARGLFRARALGESDMPRAARQILKDFTDGRLLFCHPPPTL 1759
A+D+ VL R ++ +ER A+ + G+ A + GR GMVG+PNVGKSS IN L+GA+ +H RV+VGATPGKTKHFQTL LSD +MLCDCPGLVFPSFV+S AEM+C GVLPI Q+R+ +PP L+ARRIPR + E TY IK+PV P K ++ +LE Y +ARG F D RAAR +L+D+ +G+LL+CHPPP++
Sbjct: 290 AVDEERADCKVLTRLDLLEYMERRAKAVVGKVGLR--AEDRGRVKFGMVGFPNVGKSSAINALLGASNFAHHAQRVAVGATPGKTKHFQTLALSDTIMLCDCPGLVFPSFVNSKAEMLCCGVLPIAQLRDHVPPCELVARRIPRVVFEETYGIKVPV-PNTGKYNDP---VNVYTVLEVYARARG-FTTTGKSGPDTSRAARVLLRDYVNGKLLYCHPPPSV 504
BLAST of mRNA_P-lacustris_contig945.15840.1 vs. uniprot
Match: A0A4D9D3A0_9STRA (G domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3A0_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.200e-51 Identity = 122/250 (48.80%), Postives = 163/250 (65.20%), Query Frame = 3
Query: 105 LGKALQRRRAQERAAADSASSYD-VDGSKARGKMTSVLEASNLDDFIASAMMSERAFESHKENTVVL--GPDGIEMSLDENGEINAAASGKDGGTDEFDFDHMNVPRRPAWGADMTAEDLDYLEKKSFLEWRRGIANAEENNVDM-KVTPFEKNLEVWRQLWRVIERSDLVCQLVDARNPLFYYSTDLEAYAKELMPPKPMIVVVNKADYLSRAQQQEWVQHFEGRGVAVLFFSARQQQEQLNKEAREGR 842
+G+AL R+ Q+ AA A +DG K +++SVLE ++LDDF+ +AMM++R F + KE +++ G S+ G++ G D G F F + VPRRP W M+A LD EK SFLEWRR IA EE + + +VTPFEKNLEVWRQLWRV+ERS ++ Q+VDAR+PLFYYS DL AYA E+ P + +V+VNKADYL+ AQ+ EW +F+ RG FFSAR+ QE L +ARE R
Sbjct: 15 VGRALMRKHQQQGPAAVGAHEQQRLDGCK---QLSSVLEMNSLDDFLDTAMMAQRDFSAIKERDLLVLDAKTGGLTSILPRGQV---TPGADKGMTTFAFRQLKVPRRPKWHTGMSAAALDRAEKASFLEWRREIAQLEETSGERARVTPFEKNLEVWRQLWRVLERSHVIVQIVDARDPLFYYSEDLHAYAAEMHPARERLVLVNKADYLTPAQRGEWATYFQKRGWNHAFFSARRAQELLTLQAREER 258 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig945.15840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig945.15840.1 >prot_P-lacustris_contig945.15840.1 ID=prot_P-lacustris_contig945.15840.1|Name=mRNA_P-lacustris_contig945.15840.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=375bp MCAELERLARTLGMPDPARNGGRACVGMVGYPNVGKSSLINVLVGATPLSback to top mRNA from alignment at P-lacustris_contig945:232..4458- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig945.15840.1 ID=mRNA_P-lacustris_contig945.15840.1|Name=mRNA_P-lacustris_contig945.15840.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4227bp|location=Sequence derived from alignment at P-lacustris_contig945:232..4458- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig945:232..4458- >mRNA_P-lacustris_contig945.15840.1 ID=mRNA_P-lacustris_contig945.15840.1|Name=mRNA_P-lacustris_contig945.15840.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2250bp|location=Sequence derived from alignment at P-lacustris_contig945:232..4458- (Pleurocladia lacustris SAG_25_93)back to top |