mRNA_P-lacustris_contig93.15725.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig93.15725.1 vs. uniprot
Match: D8LEK6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEK6_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 1.240e-131 Identity = 196/222 (88.29%), Postives = 207/222 (93.24%), Query Frame = 1
Query: 256 GVGPALIQGPMSRFGDTAANTGVLALMESYDSTKDLPVGAKTFCASMCAALWRIFLMPVDTTKTIMQVEGKAGFPALVKKVKVGGPSVLYHGALAASGATLVGHYPWFFTYNYLQERIPKQDSGVKKLARNGLIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYPQAVRDVVAKDGLAGLFGRGLKTKIMANGMQGLMFSVLWKAIEEKINK*SWRAGETL 921
GVGPALIQGPMSRFGDTAANTGVLALMESY+STK+LPVGAKT CAS+ AALWRIFLMPVDTTKTIMQVEGK GFPALVKKVKVGGP+VLYHGALAAS ATLVGHYPWFFTYNYLQERIPKQDSG+KKLARNG+IGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTY QAVRDV+AKDGL GLFGRGLKTKIMANGMQGLMFSVLWK ++ + K WR G +
Sbjct: 77 GVGPALIQGPMSRFGDTAANTGVLALMESYESTKNLPVGAKTLCASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKVGGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGIKKLARNGIIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVRDVIAKDGLVGLFGRGLKTKIMANGMQGLMFSVLWKLSKDFV-KSGWREGSRI 297
BLAST of mRNA_P-lacustris_contig93.15725.1 vs. uniprot
Match: A0A835ZPC0_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPC0_9STRA) HSP 1 Score: 336 bits (861), Expect = 5.770e-109 Identity = 167/229 (72.93%), Postives = 189/229 (82.53%), Query Frame = 1
Query: 205 DGGLPHSIQPGGRKVLPGVGPALIQGPMSRFGDTAANTGVLALMESYDSTKDLPVGAKTFCASMCAALWRIFLMPVDTTKTIMQVEGKAGFPALVKKVKVGGPSVLYHGALAASGATLVGHYPWFFTYNYLQERIPKQDSGVKKLARNGLIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYPQAVRDVVAKDGLAGLFGRGLKTKIMANGMQGLMFSVLWKAIEEKIN 891
+GG+P + GV PAL+QGP+SRFGDTAANTGVLAL+ES DSTK LPVG KT CAS AALWRI LMP+DTTKTIMQVEGK GFPAL KK K GPSVLYHGA+AAS AT VGHYPWFFTYNYLQERIPK+ + ++KLARN +IGF SS+VSDTCSNSIRV+KVYKQS TE VTY QA ++V+A DG+ GLFGRGLKTK++ANGMQGLMFSV WK EE+ N
Sbjct: 68 EGGIPRFYR--------GVVPALVQGPLSRFGDTAANTGVLALLESMDSTKGLPVGVKTLCASGAAALWRIVLMPIDTTKTIMQVEGKNGFPALKKKFKANGPSVLYHGAIAASAATFVGHYPWFFTYNYLQERIPKETATLRKLARNAVIGFASSLVSDTCSNSIRVIKVYKQSSTEPVTYLQAAKNVIASDGVLGLFGRGLKTKLIANGMQGLMFSVFWKFFEEQFN 288
BLAST of mRNA_P-lacustris_contig93.15725.1 vs. uniprot
Match: A0A7S2V2G3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G3_9STRA) HSP 1 Score: 308 bits (788), Expect = 5.060e-98 Identity = 150/210 (71.43%), Postives = 171/210 (81.43%), Query Frame = 1
Query: 265 PALIQGPMSRFGDTAANTGVLALMESYDSTKDLPVGAKTFCASMCAALWRIFLMPVDTTKTIMQVEGKAGFPALVKKVKVGGPSVLYHGALAASGATLVGHYPWFFTYNYLQERIPKQDSGVKKLARNGLIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYPQAVRDVVAKDGLAGLFGRGLKTKIMANGMQGLMFSVLWKAIEEKINK 894
PAL+QGPMSRFGDTAANTG LALM+SYDST++LP KT AS AA+WRIFLMPVDT KT MQVEG G L K K GGP+VLYHGALAAS AT VGHYPWF T+N L RIPK D KKL RN IGFC+S++SDTCSNSIRVVKVY+Q+H E V+Y AV+ V+A+DGLAGLFGRGLKTKI+ANGMQG+MFSV+W+ IE+ INK
Sbjct: 80 PALVQGPMSRFGDTAANTGTLALMDSYDSTRNLPAAVKTVSASATAAIWRIFLMPVDTLKTTMQVEGSKGVGQLAAKFKAGGPTVLYHGALAASTATFVGHYPWFTTFNILNARIPKYDDLPKKLMRNAFIGFCASLISDTCSNSIRVVKVYRQTHPEKVSYVNAVKGVIAEDGLAGLFGRGLKTKILANGMQGIMFSVMWRMIEDMINK 289
BLAST of mRNA_P-lacustris_contig93.15725.1 vs. uniprot
Match: A0A7S3V5E4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5E4_9STRA) HSP 1 Score: 298 bits (764), Expect = 1.890e-94 Identity = 143/228 (62.72%), Postives = 177/228 (77.63%), Query Frame = 1
Query: 205 DGGLPHSIQPGGRKVLPGVGPALIQGPMSRFGDTAANTGVLALMESYDSTKDLPVGAKTFCASMCAALWRIFLMPVDTTKTIMQVEGKAGFPALVKKVKVGGPSVLYHGALAASGATLVGHYPWFFTYNYLQERIPKQDSGVKKLARNGLIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYPQAVRDVVAKDGLAGLFGRGLKTKIMANGMQGLMFSVLWKAIEEKI 888
DGG+P + GV PAL QGP+SRFGDTAANTGVL L+ S+DSTKD+ VG KT CAS AA WRI LMP+DT KT MQV G F +V K+K GP+VLYHG+LA++ AT VGHYPWFFTYNYL E+IPKQD +++L R ++GFCSS +SDTCSNSIR+VKVYKQS TE ++YPQ V++V+A+ G+ GLF RGL+TKI+ANGMQG++FS+LWK EE +
Sbjct: 68 DGGIPRFYR--------GVLPALAQGPLSRFGDTAANTGVLTLLNSFDSTKDMGVGVKTVCASAAAAAWRICLMPIDTVKTTMQVTGS--FSNVVNKIKASGPTVLYHGSLASASATFVGHYPWFFTYNYLSEKIPKQDDQLRELGRRAILGFCSSAISDTCSNSIRIVKVYKQSSTEAISYPQVVKNVIAESGVKGLFFRGLETKILANGMQGILFSILWKQFEETL 285
BLAST of mRNA_P-lacustris_contig93.15725.1 vs. uniprot
Match: A0A0L0FNE2_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FNE2_9EUKA) HSP 1 Score: 296 bits (757), Expect = 2.940e-93 Identity = 148/228 (64.91%), Postives = 177/228 (77.63%), Query Frame = 1
Query: 220 HSIQPGG-RKVLPGVGPALIQGPMSRFGDTAANTGVLALMESYDSTKDLPVGAKTFCASMCAALWRIFLMPVDTTKTIMQVEGKAGFPALVKKVKVGGPSVLYHGALAASGATLVGHYPWFFTYNYLQERIPK--QDSGVKKLARNGLIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYPQAVRDVVAKDGLAGLFGRGLKTKIMANGMQGLMFSVLWKAIEEKINK 894
H + GG R+ G GPAL QGP+SRFGDTAAN GVLAL++SYD+T +LPVG KT AS AA WR+FLMPVDT KT MQVEG G L K+ GGP VLY GA+AASGAT VGHYPWFF YN LQE++PK +D +KKL RN +IGFC+SVVSDTCSNSIRVVK KQ+ ++YP+ V+ V+ +DGL GLFGRGLKT+I+AN MQG++FSVLWKA+EE+ NK
Sbjct: 70 HLYKEGGIRRFYRGYGPALFQGPLSRFGDTAANAGVLALLDSYDTTSNLPVGVKTIFASAAAATWRVFLMPVDTLKTTMQVEGAKGVSQLRGKLSSGGPKVLYSGAIAASGATFVGHYPWFFVYNLLQEKLPKAEKDETLKKLGRNAVIGFCASVVSDTCSNSIRVVKTTKQTAAVQMSYPETVKMVIKQDGLIGLFGRGLKTRILANAMQGMLFSVLWKALEEQWNK 297
BLAST of mRNA_P-lacustris_contig93.15725.1 vs. uniprot
Match: A0A7S1BP81_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BP81_9STRA) HSP 1 Score: 293 bits (751), Expect = 1.570e-92 Identity = 148/230 (64.35%), Postives = 180/230 (78.26%), Query Frame = 1
Query: 205 DGGLPHSIQPGGRKVLPGVGPALIQGPMSRFGDTAANTGVLALMESYDSTKDLPVGAKTFCASMCAALWRIFLMPVDTTKTIMQVEGKAGFPALVKKVKVGGPSVLYHGALAASGATLVGHYPWFFTYNYLQERIPKQDSGVKKLARNGLIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYPQAVRDVVAKDGLAGLFGRGLKTKIMANGMQGLMFSVLWKAIEEKINK 894
DGG+P + GV PALIQGPMSRFGDTAANTG++ LM SYDSTK+L VG KT AS AAL+RIFLMPVDT KT MQVEG G A+VKKVK+GG LY G+LAA+ AT VGHYPWFFTYNYL +++ ++++ + KL R LIGFCSS +SDTCSNSIRVVKVYKQ+H + +TYPQ VR+V+++ GL GLF RGL+TKI+ANGMQG++FS+LWK EE + K
Sbjct: 65 DGGIPRFYR--------GVLPALIQGPMSRFGDTAANTGMMTLMNSYDSTKNLAVGVKTISASASAALFRIFLMPVDTCKTTMQVEGNFG--AVVKKVKIGGVPALYQGSLAAASATFVGHYPWFFTYNYLSDKLEERETTLGKLGRRALIGFCSSAISDTCSNSIRVVKVYKQAHKDVLTYPQVVRNVISESGLQGLFLRGLETKILANGMQGILFSILWKQFEELLFK 284
BLAST of mRNA_P-lacustris_contig93.15725.1 vs. uniprot
Match: A0A4D9D3X0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3X0_9STRA) HSP 1 Score: 293 bits (749), Expect = 5.130e-92 Identity = 146/228 (64.04%), Postives = 171/228 (75.00%), Query Frame = 1
Query: 205 DGGLPHSIQPGGRKVLPGVGPALIQGPMSRFGDTAANTGVLALMESYDSTKDLPVGAKTFCASMCAALWRIFLMPVDTTKTIMQVEGKAGFPALVKKVKVGGPSVLYHGALAASGATLVGHYPWFFTYNYLQERIPKQDSGVKKLARNGLIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYPQAVRDVVAKDGLAGLFGRGLKTKIMANGMQGLMFSVLWKAIEEKI 888
DGG+P Q G+ PAL+QGP SRFGDTAAN GV+ L++S+D TKDLPV KT AS AA WRIFLMPVDT KTI QVEGK GF L+ K+K GP V+YHGALAA A L+GHYPWF TYNYLQE +PK D KL RN LIGF SS +SDT SNS+RVVKVYKQ+++E + YP AVR ++A DGL GLFGRGL TKI ANG+QGL+FSVLWK I++ +
Sbjct: 77 DGGIPRFYQ--------GLLPALVQGPASRFGDTAANAGVITLLDSFDETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKTHGPGVMYHGALAAFAANLLGHYPWFATYNYLQENLPKTDDFKMKLCRNALIGFSSSAISDTVSNSVRVVKVYKQANSEHIAYPDAVRRIIAADGLVGLFGRGLSTKIFANGLQGLVFSVLWKLIDDHL 296
BLAST of mRNA_P-lacustris_contig93.15725.1 vs. uniprot
Match: A0A7S2A6F7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6F7_TRICV) HSP 1 Score: 291 bits (745), Expect = 1.420e-91 Identity = 147/228 (64.47%), Postives = 174/228 (76.32%), Query Frame = 1
Query: 205 DGGLPHSIQPGGRKVLPGVGPALIQGPMSRFGDTAANTGVLALMESYDSTKDLPVGAKTFCASMCAALWRIFLMPVDTTKTIMQVEGKAGFPALVKKVKVGGPSVLYHGALAASGATLVGHYPWFFTYNYLQERIPKQDSGVKKLARNGLIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYPQAVRDVVAKDGLAGLFGRGLKTKIMANGMQGLMFSVLWKAIEEKI 888
DGG+P + GV PALIQGP+SRFGDTAANTGVL LM S D+TKDL VG KT AS AA +RIFLMPVDT KT MQV GK G A+V KVK+GG LY G+LAA+ AT VGHYPWFFTYNYL E+IPKQD+ + +L R L+GFCSS +SDTCSNSIRVVKVYKQSH E ++YPQ V+ V+ + G+ GL RGL+TKI+ANGMQG++FS+LWK EE +
Sbjct: 69 DGGIPRFYR--------GVAPALIQGPLSRFGDTAANTGVLTLMNSMDATKDLSVGFKTVAASGAAAAFRIFLMPVDTVKTTMQVTGKFG--AVVDKVKIGGVPALYQGSLAAASATFVGHYPWFFTYNYLSEKIPKQDTQLAELGRRALLGFCSSAISDTCSNSIRVVKVYKQSHPENLSYPQVVQRVIQESGIKGLMFRGLETKILANGMQGILFSILWKQFEETL 286
BLAST of mRNA_P-lacustris_contig93.15725.1 vs. uniprot
Match: A0A7S3HQJ3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQJ3_9STRA) HSP 1 Score: 291 bits (744), Expect = 2.600e-91 Identity = 143/230 (62.17%), Postives = 177/230 (76.96%), Query Frame = 1
Query: 205 DGGLPHSIQPGGRKVLPGVGPALIQGPMSRFGDTAANTGVLALMESYDSTKDLPVGAKTFCASMCAALWRIFLMPVDTTKTIMQVEGKAGFPALVKKVKVGGPSVLYHGALAASGATLVGHYPWFFTYNYLQERIPKQDSGVKKLARNGLIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYPQAVRDVVAKDGLAGLFGRGLKTKIMANGMQGLMFSVLWKAIEEKINK 894
DGG+P + G+ PAL+QGP+SRFGDTAANTG LA ++++++T +LPV AKT AS+ AAL+RI LMP+DT KT MQVEGK G L+ K + GPS + GA+AAS AT VGHYPWFF YNYL E +P+ D KKLAR+ +IGFC+S VSDTCSNSIRV+KVYKQS+TE ++Y +A+ V+ +DGL GLFGRGLKTKI+ANGMQGLMFSVLWK I+EK K
Sbjct: 70 DGGIPRFYR--------GLVPALLQGPLSRFGDTAANTGTLAALDAFETTAELPVAAKTVAASVAAALFRILLMPIDTVKTTMQVEGKDGMKKLMTKFRAVGPSTFFQGAIAASAATFVGHYPWFFVYNYLNEVLPRYDETPKKLARSAVIGFCASAVSDTCSNSIRVIKVYKQSNTEKISYSEALGRVIKEDGLGGLFGRGLKTKILANGMQGLMFSVLWKLIDEKFFK 291
BLAST of mRNA_P-lacustris_contig93.15725.1 vs. uniprot
Match: A0A7R9YEQ5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEQ5_9STRA) HSP 1 Score: 291 bits (745), Expect = 4.170e-91 Identity = 150/232 (64.66%), Postives = 178/232 (76.72%), Query Frame = 1
Query: 205 DGGLPHSIQPGGRKVLPGVGPALIQGPMSRFGDTAANTGVLALMESYDSTKDLPVGAKTFCASMCAALWRIFLMPVDTTKTIMQVEGKAGFPALVKKVKVGGPSVLYHGALAASGATLVGHYPWFFTYNYLQERIPK-QD-SGVKKLARNGLIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYPQAVRDVVAKDGLAGLFGRGLKTKIMANGMQGLMFSVLWKAIEEKINK 894
+GG+P + GV PAL+QGP+SRFGDTAANTGV+ LM+SYDSTKDLP KT AS+ AA WRIFLMP+DT KT +QVEG+ L KKV GP VLY GALAA+ AT VGHYPWF TYN LQE IPK QD +KK RN +IGFCSSVVSDTCSNSIRVVKVYKQS+ E ++YP+ VR V+ +DG+ GLFGRGL+TKI++NG+QG+MFSVLWK I++K K
Sbjct: 98 EGGIPRFYR--------GVLPALVQGPLSRFGDTAANTGVMVLMDSYDSTKDLPAVVKTGGASLAAACWRIFLMPIDTVKTTLQVEGRQALSQLFKKVGNHGPHVLYAGALAAASATFVGHYPWFATYNTLQETIPKPQDHETLKKFGRNAMIGFCSSVVSDTCSNSIRVVKVYKQSNAEALSYPEVVRRVIKEDGVMGLFGRGLQTKILSNGLQGIMFSVLWKYIDDKFFK 321 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig93.15725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig93.15725.1 >prot_P-lacustris_contig93.15725.1 ID=prot_P-lacustris_contig93.15725.1|Name=mRNA_P-lacustris_contig93.15725.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=204bp MSRFGDTAANTGVLALMESYDSTKDLPVGAKTFCASMCAALWRIFLMPVDback to top mRNA from alignment at P-lacustris_contig93:218477..223223+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig93.15725.1 ID=mRNA_P-lacustris_contig93.15725.1|Name=mRNA_P-lacustris_contig93.15725.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4747bp|location=Sequence derived from alignment at P-lacustris_contig93:218477..223223+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig93:218477..223223+ >mRNA_P-lacustris_contig93.15725.1 ID=mRNA_P-lacustris_contig93.15725.1|Name=mRNA_P-lacustris_contig93.15725.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1224bp|location=Sequence derived from alignment at P-lacustris_contig93:218477..223223+ (Pleurocladia lacustris SAG_25_93)back to top |