mRNA_P-lacustris_contig920.15651.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig920.15651.1 vs. uniprot
Match: D7G392_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G392_ECTSI) HSP 1 Score: 669 bits (1726), Expect = 1.620e-216 Identity = 418/511 (81.80%), Postives = 436/511 (85.32%), Query Frame = 2
Query: 41 EGEAPGSEAADAARE-TTVVAADKPKRGRMCGNAVKSDEFLGFAKDNDPGAPSPNELGWMQLGRMHTPEGRAEIKRKALEKKRRGLEDVAQRXXXXXXXXXXXXXXXXXXXXXXXXXXL------------------RIXXXXAEARRKRHLNVLFLGMTRVAEYDSRGGLAKGMKRFDKVERMVRADVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNTGASRGFLRKIEEKWENVTFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMTTTKLLSEDFEIMLPINQAFFELLLPHFADLERHFTVEFLVGERLEHLKRSHLALEADDLIPEEVMQHVYGKEPERQVSRMLGVKQPTAEVAAVLLKYGVAAEHFCYARFLKLSRNPPPHPALAAVALAASSESAKIAEDMXXXXXXXXXXXXXXXXAFAAAGLSDGL-PSSHTKQNDGSTAGRACGNAREPDASAAEMIEGSS 1513
E EAPGSE E + VVAA + K+ R C + K FLG AKDN G PSPNELGWM LGRMHTPEGRA IKR+ALEKKRR LE++AQRXXXXXXXXXXXXXXXXXXXXXXXXXX RIXXXX EARRKR LNVLFLGMTRVAEYDSRGGL KGMKRFD VERMVR DVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNTGASRGFLRKIEEKWE +TFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMT T+LL +DFEIMLPINQAFFELLLPHF+DLERHFTVEFLVGERLEHLKRSHLALEADDLIPE+VMQHVYGKEPERQVSRMLGVKQPTA+VAAVLLKYGVAAEHFCYARFLKLSRNPPPHPALAAVALAASSESAKIAEDMXXXXXXXXXXXXXXX AF AAGLS L P+S Q + +A G+ E A+A E EGSS
Sbjct: 945 EEEAPGSEERGGIEEGSVVVAAGRGKKVRKCVESGKLHSFLGLAKDNPLGVPSPNELGWMSLGRMHTPEGRAAIKRQALEKKRRALEEIAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIXXXXXEARRKRRLNVLFLGMTRVAEYDSRGGLTKGMKRFDLVERMVRDDVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNTGASRGFLRKIEEKWEKITFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMTKTQLLGDDFEIMLPINQAFFELLLPHFSDLERHFTVEFLVGERLEHLKRSHLALEADDLIPEDVMQHVYGKEPERQVSRMLGVKQPTADVAAVLLKYGVAAEHFCYARFLKLSRNPPPHPALAAVALAASSESAKIAEDMXXXXXXXXXXXXXXXMAFEAAGLSGALSPTSVLPQQEARSA--TSGDGDEFHAAAVENEEGSS 1453
BLAST of mRNA_P-lacustris_contig920.15651.1 vs. uniprot
Match: A0A6H5LE14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE14_9PHAE) HSP 1 Score: 405 bits (1040), Expect = 2.360e-118 Identity = 264/396 (66.67%), Postives = 277/396 (69.95%), Query Frame = 2
Query: 41 EGEAPGSEAADAARETTVVAA-DKPKRGRMCGNAVKSDEFLGFAKDNDPGAPSPNELGWMQLGRMHTPEGRAEIKRKALEKKRRGLEDVAQRXXXXXXXXXXXXXXXXXXXXXXXXXXL------------------RIXXXXAEARRKRHLNVLFLGMTRVAEYDSRGGLAKGMKRFDKVERMVRADVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNTGASRGFLRKIE-----------------------------------------------------------------------EKWENVTFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMTTTKLLSEDFEIMLPINQ 958
E E PG++A E +VVAA D+ K+GR C + K FLGFAKDN PG PSPNELGWM LG MHTPEGRA IKR+ALE+KRR LE++AQRXXXXXXXXXXXXXXXXXXXXXXXXXX RIXXXX EARRKR LNVLFLGMTRVAEYDSRGGL KGMKRFD VERMVR DVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNTGASRGFLRKIE EKWENVTFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMT T+LLS+DFEI+LPINQ
Sbjct: 944 EEETPGADAGGGIEEGSVVAAADRRKKGRKCVESGKLHSFLGFAKDNPPGVPSPNELGWMSLGPMHTPEGRAAIKRQALEEKRRALEEIAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIXXXXXEARRKRRLNVLFLGMTRVAEYDSRGGLTKGMKRFDLVERMVRDDVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNTGASRGFLRKIEASYSLLLVVGRIAVIIRPGPCCQPIPGSVSPIFQDEHDPGADDKREVFARRHCVDGMYTACLVWALCTDVQEKWENVTFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMTKTQLLSDDFEIILPINQ 1339
BLAST of mRNA_P-lacustris_contig920.15651.1 vs. uniprot
Match: A0A6H5K5F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F0_9PHAE) HSP 1 Score: 282 bits (721), Expect = 4.630e-78 Identity = 155/279 (55.56%), Postives = 198/279 (70.97%), Query Frame = 2
Query: 446 LFLGMTRVAEYDSR--GGLAKGMKRFDKVERMVRADVNEANMNPLRDTARVLAMEALGHEVRCISKVST---PGESDCENSRSTRAHGGPTGLGRFLATDITNTGASRGFLRKIEEKWENVTFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMTT--TKLLSEDFEIMLPINQAFFELLLPHFADLERHFTVEFLVGERLEHLKRSHLALEADDLIPEEVMQHVYGKEPERQVSRMLGVKQPTAEVAAVLLKYGVAAEHFCYARFLKLSRNPPP 1261
LFLG+T V E+D+ G LAK ++RF +E+ +R V E NMNPLRDT RVLA E G+ V C+SKVS PG S A G P L TD++NT ASRG LR KW +V F+ VLLDH+WLPDS WLNK YMANDGGLI+NL+ MT T+LLS+DFE++LPIN+ F ELLLPHF++L++HFTV FLVG+ L LK+SHLAL+A DLIP+++M VYGK ERQ+S +LGVK+PT E+ VL +GV +FC+ARFL+L+++ P
Sbjct: 435 LFLGVTFVEEHDAEFLGELAKRVRRFKTLEKKLRNKVTEGNMNPLRDTIRVLATETQGYRVSCVSKVSVSRGPGSS---------AKGRPVSRRHLLETDMSNTTASRGLLRS--GKWGDVKFEKVLLDHFWLPDSETWLNKNYMANDGGLIRNLISMTKPETRLLSDDFEVILPINRGFLELLLPHFSELDKHFTVAFLVGQGLNDLKKSHLALQAGDLIPDDIMMGVYGKNKERQLS-ILGVKEPTQEMVKVLRNHGVEPWNFCHARFLRLTKSAGP 701
BLAST of mRNA_P-lacustris_contig920.15651.1 vs. uniprot
Match: D8LN97_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN97_ECTSI) HSP 1 Score: 251 bits (640), Expect = 1.260e-67 Identity = 133/237 (56.12%), Postives = 169/237 (71.31%), Query Frame = 2
Query: 446 LFLGMTRVAEYDSR--GGLAKGMKRFDKVERMVRADVNEANMNPLRDTARVLAMEALGHEVRCISKVST---PGESDCENSRSTRAHGGPTGLGRFLATDITNTGASRGFLRKIEEKWENVTFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMTT--TKLLSEDFEIMLPINQAFFELLLPHFADLERHFTVEFLVGERLEHLKRSHLALEADDLIPEEVMQHVYGKEPERQ 1135
LFLG+T V E+D+ G AK ++RF +E+ +R V E NMNPLRDT RVLA E G+ V C+SKVS PG S + ++R H L TD++NT ASRG LR ++ KW +V F+ VLLDH+WLPDS WLNK YMANDGGLI+NL+ MT T+LLS+DFE++LPIN+ F ELLLPHF+ L++HFTV FLVG+ L LK+SHLAL+A DLIP+++M VYGK ERQ
Sbjct: 435 LFLGVTFVEEHDAEFLGERAKRVRRFKTLEKKLRNKVTEGNMNPLRDTVRVLATETQGYRVSCVSKVSVSRGPGSSAAKGRPASRRH--------LLETDMSNTTASRGLLRSVKGKWGDVKFEKVLLDHFWLPDSETWLNKNYMANDGGLIRNLISMTKPETRLLSDDFEVILPINRGFLELLLPHFSKLDKHFTVAFLVGQGLNDLKKSHLALQAGDLIPDDIMMGVYGKNKERQ 663
BLAST of mRNA_P-lacustris_contig920.15651.1 vs. uniprot
Match: A0A6H5KX64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX64_9PHAE) HSP 1 Score: 214 bits (545), Expect = 2.520e-60 Identity = 135/156 (86.54%), Postives = 140/156 (89.74%), Query Frame = 2
Query: 1001 RHFTVEFLVGERLEHLKRSHLALEADDLIPEEVMQHVYGKEPERQVSRMLGVKQPTAEVAAVLLKYGVAAEHFCYARFLKLSRNPPPHPALAAVALAASSESAKIAEDMXXXXXXXXXXXXXXXXAFAAAGLSDGL-PSSHTKQNDGSTAGRACGN 1465
RHFTVEFLVGERLEHLKRSHLALEADDLIPE+VMQHVYGKEPERQVSRMLGVKQPTA+VAAVLLKYGVAAEHFCYARFLKLSRNPPPHPALAAVALAASSESAKIAEDMXXXXXXXXXXXXXX AF AAGLS L P+S Q + +A GN
Sbjct: 8 RHFTVEFLVGERLEHLKRSHLALEADDLIPEDVMQHVYGKEPERQVSRMLGVKQPTADVAAVLLKYGVAAEHFCYARFLKLSRNPPPHPALAAVALAASSESAKIAEDMXXXXXXXXXXXXXXAMAFEAAGLSGVLSPTSVPPQQEVGSATSGNGN 163
BLAST of mRNA_P-lacustris_contig920.15651.1 vs. uniprot
Match: A0A835YWD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD2_9STRA) HSP 1 Score: 167 bits (423), Expect = 9.480e-43 Identity = 103/254 (40.55%), Postives = 144/254 (56.69%), Query Frame = 2
Query: 515 FDKVERMVRADVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNTGA-SRGFLRKIEEKWENVTFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMTTTKLLSEDFEIMLPINQAFFELLLPHFADLERHFTVEFLVGERLEHLKRSHLALEADDLIPEEVMQHVYGKEPERQVSRMLGVKQPTAEVAAVLLKYGVAAEHFCYA------RFLKLSRNP 1255
F+ E +R V++ N N +RDTAR+LA+E+LG +V +S V + R G TG RFL T G+ SRGF+ + KW NV F +V LD+YWLPDSV WL KGYMAN+ G+I NL++M +L+ F+++LP+N A + L P L +F V F+ G+ E ++ HLA++AD LIP VM VY K +RQ+ MLG+K A A +LK V+ RFL+L+ P
Sbjct: 13 FEAAEAEIRHAVSDCNCNLMRDTARILALESLGCDVFAVSLVD-----ELAWERIVPDGGADTGP-RFLNTSFATVGSRSRGFVECVLLKWPNVIFQSVYLDYYWLPDSVAWLQKGYMANNAGVIDNLIKMKEIGILARGFDVVLPVNTALVQCLEPLVKKLRANFAVHFISGDT-EAIRPHHLAVQADSLIPPHVMSGVYCKNQQRQIDDMLGIKGSAAARALTILKRLVSGRTLARTPDLQDVRFLRLTPLP 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig920.15651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig920.15651.1 >prot_P-lacustris_contig920.15651.1 ID=prot_P-lacustris_contig920.15651.1|Name=mRNA_P-lacustris_contig920.15651.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=481bp MCGNAVKSDEFLGFAKDNDPGAPSPNELGWMQLGRMHTPEGRAEIKRKALback to top mRNA from alignment at P-lacustris_contig920:7066..23516+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig920.15651.1 ID=mRNA_P-lacustris_contig920.15651.1|Name=mRNA_P-lacustris_contig920.15651.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=16451bp|location=Sequence derived from alignment at P-lacustris_contig920:7066..23516+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig920:7066..23516+ >mRNA_P-lacustris_contig920.15651.1 ID=mRNA_P-lacustris_contig920.15651.1|Name=mRNA_P-lacustris_contig920.15651.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2886bp|location=Sequence derived from alignment at P-lacustris_contig920:7066..23516+ (Pleurocladia lacustris SAG_25_93)back to top |