mRNA_P-lacustris_contig92.15635.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig92.15635.1
Unique NamemRNA_P-lacustris_contig92.15635.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig92.15635.1 vs. uniprot
Match: D7G2E5_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E5_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 3.350e-96
Identity = 180/369 (48.78%), Postives = 224/369 (60.70%), Query Frame = 3
Query:  132 MWFWAHIGFIYTLGRLVLDDTPTHLPTRDIFEFFSAQDCVNFLRFTRSQIILMMGILCVPDMIRTDCGYVVSGRTALCILLYRMAFPCRFK--RHAGDISSSGFTAMRSL*LHV------AFHGRDVG---PAAD---TRYREVGAPATG----VHGSPPSLGVSPAQLLGF---HRRHRSRYL*AKTQP----ASLFQRPQALSCHEIPRHRHSRRYRGGSVWARTRDKA*RSFAERVR*AELTLAEHMNSPTGEPYLMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNVNMSACRVTVEWVLKEMTSKWAFVAMKNQQKYLLSPVGVQYKVATLLSNITLMCERGQPDLSVLRMPSSLFGGVPGC 1163
            MWFWAHIGFIYT+GRL +DDT T LP RDIF F SAQDC+NFLRF+R QII+ +  LCVPDMIRTDCGYV++GRTALC+LLYR+AFPCR+K  R     S S      +  LH       +    D+G   P  D    R +  G P       + G+  ++  +  +   F   H+R+ +  L +   P      LF  P+  + H++    H     G  V  +                     EHMNS +G+PY++YGDPAYGMSTHLNCPYSAE YGPL+AGM+EFN  MSACRV VEWV KEMTSKWAFVA+KNQQK+LLSP+GV+     LL       ERGQ DL V R+P+++  GVPGC
Sbjct:    1 MWFWAHIGFIYTVGRLPIDDTATPLPARDIFTFLSAQDCINFLRFSREQIIITVQHLCVPDMIRTDCGYVIAGRTALCVLLYRLAFPCRYKDMRLIFHRSDSCLCETFNYMLHFMNETWGSMLTLDLGRLVPRLDFFAERLQTWGCPLPNCWAFIDGTVRAICRTIREQRAFFNGHKRYHAIKLQSVVTPDGIMVDLFG-PELGTRHDV----HLLHESGVLVMCQ---------------------EHMNSASGDPYVVYGDPAYGMSTHLNCPYSAEAYGPLSAGMIEFNKQMSACRVAVEWVFKEMTSKWAFVALKNQQKHLLSPIGVRTVHPQLL-------ERGQRDLPVFRVPTAVVRGVPGC 336          
BLAST of mRNA_P-lacustris_contig92.15635.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 2.080e-75
Identity = 161/370 (43.51%), Postives = 203/370 (54.86%), Query Frame = 3
Query:   48 LRAKERIARKTRALAFLQLRTACALHSHMWFWAHIGFIYTLGRLVLDDTPTHLPTRDIFEFFSAQDCVNFLRFTRSQIILMMGILCVPDMIRTDCGYVVSGRTALCILLYRMAFPCRFKRHAGD--ISSSGFTAMRSL*LH---------VAFHGRDVGPAADTRYREV---GAPATG--------VHGSPPSLGVSPAQLLGFHRRHRSRYL*AKTQPASLFQRPQALSCHEIPRHRHSRRYRGGSVWARTRDKA*RSFAERVR*AELTLAE----HMNSPTGEPYLMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNVNMSACRVTVEWVLKEMTSKWAFVAMKNQQKYLLSPVGVQYKVATLLSN 1079
            LR ++RIARK RAL  +Q + + +L++ MWF +H   IYTLGRL +DD PT    R +  FFS QDCV F+RFTR QI+LM+ +L VP +IRT+CG+VV GR ALC+LLYR+AFPC  K    D  +S S      +  LH         ++   + + P   T    V   G P T         V G    +        G+ R+H  ++    T P  LF     L   E+                        +  +    AE TL E    HMNSP+G PY +YGDPAYG + H+ CP+SA   GPLT  M +FN +MS CRVTVEW  KEMTSKWAFV MK QQK+LLSPV  QYKVATLLSN
Sbjct:   50 LRIRDRIARKKRALLPMQWQQSYSLYTSMWFASHFAVIYTLGRLAIDDIPTGAARRHVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPCCLKDMRLDFGLSESCICETFNWMLHFMDFKWGFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNKRFFYNGYKRKHAIKFQGVVT-PDGLF---VDLYDAEVG-----------------------TTHDGYLLAESTLLEKLQTHMNSPSGHPYCVYGDPAYGQTDHIQCPFSASVNGPLTPAMRKFNKSMSQCRVTVEWGFKEMTSKWAFVDMKCQQKFLLSPVATQYKVATLLSN 392          
BLAST of mRNA_P-lacustris_contig92.15635.1 vs. uniprot
Match: A0A6H5JM46_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM46_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 8.820e-75
Identity = 145/322 (45.03%), Postives = 182/322 (56.52%), Query Frame = 3
Query:  132 MWFWAHIGFIY-TLGRLVLDDTPTHLPTRDIFEFFSAQDCVNFLRFTRSQIILMMGILCVPDMIRTDCGYVVSGRTALCILLYRMAFPCRFKRHAGDISSSGFTAMRSL*LHVAFHGRDVGPAADTRYREVGAPATGVHGSPPSLGVSPAQLLGFHRRHRSRYL*AKTQPASLFQRPQALSCHEI--PRHRHSRRYRGGSVWARTRDK---A*RSFAERVR*AELTLAEHMNSPTGEPYLMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNVNMSACRVTVEWVLKEMTSKWAFVAMKNQQKYLLSPVGVQYKVATLLSN 1079
            MWF +H+  IY TLG L +DD PT    RD+  FFS QDCV F+RFTR QI+LM+ +L VP +IRT+CG+VV GR ALC+LLYR+AFP R K             +R   L    HG  VG          G  A+   G      +SP  LLG HRR+ +R +  +    + ++R  A+    +  P       Y  G+V     D    A  +  E+       L  HMNSP+G  Y +YG+PAYG + H+ CP+S    GPLT  M  FN +MS CRVTVEW  KEMTSKWAF+ MK Q K+LLSPV  QYKVATLLSN
Sbjct:    1 MWFASHVAVIYITLGLLAIDDIPTGAARRDVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPYRLKDMRLVFRPERILYLRDFQLDATLHGFQVGVPPLAGRSTAGTKASYFCGGSLQQRLSPDTLLGLHRRNCARPIRNQRFFYNGYKRKHAIKFQGVVTPDGLFVELY--GAVVGTRHDGHLLAQSALLEK-------LQTHMNSPSGHRYCLYGNPAYGQTDHIQCPFSVSVNGPLTPAMRNFNKSMSRCRVTVEWGFKEMTSKWAFIDMKCQHKFLLSPVATQYKVATLLSN 313          
BLAST of mRNA_P-lacustris_contig92.15635.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 9.080e-70
Identity = 145/338 (42.90%), Postives = 183/338 (54.14%), Query Frame = 3
Query:  123 HSHMWFWAHIGFIYTLGRLVLDDTPTHLPTRDIFEFFSAQDCVNFLRFTRSQIILMMGILCVPDMIRTDCGYVVSGRTALCILLYRMAFPCRFK--RHAGDISSSGFTAMRSL*LH---------VAFHGRDVGPA----ADTRYREVGAPATGVHGSPPSLGVSPAQLLGFHRRHRSRYL*AKTQPASLFQ---RPQALSCHEIPRHRHSRRYRGGSVWARTRDKA*RSFAERVR*AELTLAEHMNSPTGEPYLMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNVNMSACRVTVEWVLKEMTSKWAFVAMKNQQKYLLSPVGVQYKVATLLSNI 1082
            ++ MW   ++ FIYT+  LV DD  T +  RD+  FFS QDC+NFLRFT+ QI+LM+ +L +P  IRTDCG+ VSGR ALC+LLYR+AFPCR K  R    +S S  +   +  LH         ++     + P     A+  Y     P T   G         A+ + F R + + +   K + A  FQ    P  L                  +W         S+          LA H NSP+G PY +YGDPAYG+S HL CP+SA ++GPLT  M +FN  MS CRV VEW  KEMTSKW FV MK QQKYLLSPVG QY VATLLSNI
Sbjct:    5 YTDMWMAYNMAFIYTMASLVTDDAATRVARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFAVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCISETFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYN-ADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGH---KRKHAIKFQGVITPDGLFV---------------DMWGPVLGTRHDSYLLAQSGLMQKLATHSNSPSGHPYCLYGDPAYGLSDHLACPFSASSHGPLTPDMADFNQRMSHCRVAVEWGFKEMTSKWTFVDMKPQQKYLLSPVGKQYLVATLLSNI 323          
BLAST of mRNA_P-lacustris_contig92.15635.1 vs. uniprot
Match: A0A6H5KH29_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH29_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 3.650e-63
Identity = 144/380 (37.89%), Postives = 183/380 (48.16%), Query Frame = 3
Query:  126 SHMWFWAHIGFIYTLGRLVLDDTPTHLPTRDIFEFFSAQDCVNFLRFTRSQIILM------------------------------------------MGILCVPDMIRTDCGYVVSGRTALCILLYRMAFPCRFK--RHAGDISSSGFTAMRSL*LH---------VAFHGRDVGPAADTRYREV----GAPATGVHG--SPPSLGVSPAQLLGFHRR--HRSRYL*AKTQPASLFQRPQALSCHEIPRHRHSRRYRGGSVWARTRDKA*RSFAERVR*AELTLAEHMNSPTGEPYLMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNVNMSACRVTVEWVLKEMTSKWAFVAMKNQQKYLLSPVGVQYKVATLLSNI 1082
            ++MW   ++ FIYT+  L+ DD  T L  RD   FFS QDC+NFLRFT+ Q  L+                                          + +L +P  IRTDCG++VSGR ALC+LLYR+AFPCR K  R    +S S      +  LH         ++     + P     + E     G P T   G       G++  +L   H+   H  ++    T P  LF                        +W         S+          LA H NSP+G PY +YGDPAYG+S HL CP+SA +YGPLT  M +FN  MS CRVTVEW  KEMTSKWAFV MK+QQKYLLSPVG QY+VATLLSN+
Sbjct:   25 TYMWMAYNMAFIYTMASLITDDVATSLARRDAANFFSPQDCINFLRFTQPQTTLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLLLIPAFIRTDCGFIVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNRMLHFLDFKWGWLLSVDVERLKPRLLVEFAEAIYNAGCPLTHCWGFIDETIRGIARVRLADTHQLSIHAIKFQGVVT-PDGLFV----------------------DLWGLVLGTRHDSYLLAQSGLMQKLAAHFNSPSGRPYCLYGDPAYGLSDHLVCPFSAASYGPLTPEMADFNQRMSHCRVTVEWGFKEMTSKWAFVDMKSQQKYLLSPVGKQYRVATLLSNM 381          
BLAST of mRNA_P-lacustris_contig92.15635.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 4.470e-63
Identity = 148/355 (41.69%), Postives = 186/355 (52.39%), Query Frame = 3
Query:  168 LGRLVLDDTPTHLPTRDIFEFFSAQDCVNFLRFTRSQIILMMGILCVPDMIRTDCGYVVSGRTALCILLYRMAFPCRFK--RHAGDISSSGFTAMRSL*LH-------------VAFHGRDVGPAADTRYREVGAPATGVHGSPPSL--GVSPAQLL------GFHRRHRSRYL*AKTQPASLFQRPQALSCHEIPRHRHSRRYRGGSVWARTRDKA*RSF--AERVR*AELTLAEHMNSPTGEPYLMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNVNMSACRVTVEWVLKEMTSKWAFVAMKNQQKYLLSPVGVQYKVATLLSNITLMCERGQPDLSVLRMPSSLFGGVP 1157
            + RL LDDTPT +   D   FFS QDCVNFLRFT+SQ++LM+ +L +P  IRTDC +VVSGR ALC+LLYR+AFPCR K  R    +S S      +  LH             VA     +   A+  +   G P T   G       G++  +        G  R+H  ++    T P  LF                        +W         SF  A+     +L++   +NSPTG PY +YGDPAYG+S HL CP+SA + GPLT  M +FN  MS CRVTVEW  KEMT KWAFV+MK QQK+LLSPV  QY+VATLLSN    C  G  ++S        FG VP
Sbjct:    1 MARLELDDTPTSIARSDATAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCEFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNS-GCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVIT-PDGLFV----------------------DLWGPVAGTRHDSFILAQSGLMEKLSM---LNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVSMKPQQKFLLSPVAKQYRVATLLSNWH-SCMNGGNEIS------QYFGVVP 321          
BLAST of mRNA_P-lacustris_contig92.15635.1 vs. uniprot
Match: A0A6H5L370_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L370_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 2.740e-53
Identity = 129/306 (42.16%), Postives = 164/306 (53.59%), Query Frame = 3
Query:  228 FFSAQDCVNFLRFTRSQIILMMGILCVPDMIRTDCGYVVSGRTALCILLYRMAFPCRFK--RHAGDISSSGFTAMRSL*LHV---------AFHGRDVGPAADTRYREV---GAPATG--------VHGSPPSLGVSPAQLLGFHRRHRSRYL*AKTQPASLFQRPQALSCHEIPRHRHSRRYRGGSVWARTRDKA*RSFAERVR*AELTLAEHMNSPTGEPYLMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNVNMSACRVTVEWVLKEMTSKWAFVAMKNQQKYLLSPVGVQYKVATLLSN 1079
            FFS QDCV F+RFTR QI+LM+ +L VP +IRT+CG VV GR ALC+LLYR+AFPCR K  R    +S S      +  LH+         +   + + P   T    V   G P T         V G    +        G+ R+H  ++    T P  L      L   E+   RH      G + A++      +  E+       L  HMNSP+G PY ++GDPAYG + H+ CP+SA   G L++ M  FN +MS  RVTVEW  KEMTSKWAFV MK QQK+LLSPV  QY VATLLSN
Sbjct:    4 FFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGVVVGGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNWMLHIMDVKLRFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNQRFFYSGYKRKHAIKFQGVVT-PDGLI---DDLYAAEVGT-RHD-----GYLLAQS------ALLEK-------LQTHMNSPSGHPYCLHGDPAYGQTDHVQCPFSASVNGLLSSAMRNFNKSMSQRRVTVEWGFKEMTSKWAFVGMKCQQKFLLSPVATQYNVATLLSN 286          
BLAST of mRNA_P-lacustris_contig92.15635.1 vs. uniprot
Match: A0A6H5KRJ1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ1_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.270e-48
Identity = 119/307 (38.76%), Postives = 164/307 (53.42%), Query Frame = 3
Query:   96 LQLRTACALHSHMWFWAHIGFIYTLGRLVLDDTPTHLPTRDIFEFFSAQDCVNFLRFTRSQIILMMGILCVPDMIRTDCGYVVSGRTALCILLYRMAFPCRFK--RHAGDISSSGFTAMRSL*LHVAFHGRDVGPAADTRYREVGAPATGVHGSPPSLGVSPAQLL---GFHRRHRSRYL*AKTQPASLFQRPQALSCHEIPRHRHSRRYRGG--------SVWARTRDKA*RSFAERVR*AELTLAEHM---NSPTGEPYLMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNVNMSACRVTVEW 968
            L+ R    +++ +WF   I FIY +  L LDDTPT +  RD+  FFS QDCVNFLRFT+SQ++LM+ +L +P  IRTDCG+VVSGR ALC+LLYR+AFPCR K  R    +S S    + +  LH            D R+  +   +  V    P L +  A+ +   G    H   ++    +  +  +  Q L  +   + +H+ +++G          +W         SF      A+  L E M   NSPT  PY + GDPAYG+S HL CP+SA + GPLT  M +FN  MS CRVTVEW
Sbjct:    2 LRCRNLFEVYTDIWFVYKIAFIYAMVCLELDDTPTSIARRDVTAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGMSESCICEVFNWMLHFL----------DFRWGYL--LSLDVARLQPHL-IEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKHWQRL-LYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHYSFIL----AQSGLMEKMSVLNSPTSHPYCLCGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEW 290          
BLAST of mRNA_P-lacustris_contig92.15635.1 vs. uniprot
Match: A0A6H5KLS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS3_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 9.940e-48
Identity = 131/319 (41.07%), Postives = 170/319 (53.29%), Query Frame = 3
Query:  168 LGRLVLDDTPTHLPT-RDIFEFFSAQDCVNFLRFTRSQIILMMGILCVPDMIRTDCGYVVSGRTALCILLYRMAFPCRFKRHA---GDISSSGFTAMRSL*LHVAFH-GRDVGPAADTRYREVGAPATGVHGS----PPSLGVSPAQLLGFHRRHRSR---YL*AKTQPASLFQ---RPQALSCHEIPRHRHSRRYRGGSVWARTRDKA*RSFAERVR*AELTLAEHMNSPTGEPYLMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNVNMSACRVTVEWVLKEMTSKWAFVAMKNQQKYLLSPVGVQYKVATLLSN 1079
            L  +++D   T +P       FFS QDCVNFLRFT  QI +M+ +L +P  IRT CG+VVSGR ALC+LLYRMAFPCR K      G   S    A + +   + F  G  +  + ++    +   A  V+ +    P   G     + G  R  R +   Y   K + A  FQ    P  L                G V     D      A+     +L +   +NSP+G+PY +YGDPAYG+S HL CP+SA + GPLT  + +FN  +SACRVTVEW  KE+ + WAFV MK QQK LLSPV VQY+VATLLSN
Sbjct:  367 LDYILVDRGSTQIPELHGRHGFFSPQDCVNFLRFTILQITVMLELLLIPAFIRTTCGFVVSGREALCVLLYRMAFPCRLKDMPLVFGMSESRICEAFKWMLHFLDFKWGFLLSLSVESVQLRLLEFAEAVYNAGCPLPRCWGFIDGTVRGIARPKRWQRLFYNDHKGKHAFKFQGVVTPDGLFADLW-----------GPVVGTRHDNY--ILAQSGLMQKLAM---LNSPSGQPYYLYGDPAYGLSNHLICPFSASSVGPLTPEVADFNKRISACRVTVEWGFKEICNYWAFVNMKQQQKSLLSPVAVQYRVATLLSN 669          
BLAST of mRNA_P-lacustris_contig92.15635.1 vs. uniprot
Match: A0A6H5JYJ9_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ9_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.020e-47
Identity = 77/124 (62.10%), Postives = 98/124 (79.03%), Query Frame = 1
Query:  403 RDMRVIFHLPDSLLCEAFNYMLHFMDETWGRLLTLDIGRLVPQLPVFMEALQVWGCPLPNCWASIDGTVRAICRPKRNQRAYFNGHKHYHAMKFQGIVTPDGIVVDLFGPELGTRHDVHLLNES 774
            +DMR++F L +S +CE FN+MLHFMD  WG LL+LD+ RLVP+L  F EA+   GCPL +CWA IDGTVR I RP RNQR ++NG+K  HA+KFQG+VTPDG+ VDL+G E+GTRHD +LL +S
Sbjct:   99 KDMRLVFGLSESCICETFNWMLHFMDFKWGFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNQRFFYNGYKRKHAIKFQGVVTPDGLFVDLYGAEVGTRHDGYLLAQS 222          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig92.15635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2E5_ECTSI3.350e-9648.78DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JS57_9PHAE2.080e-7543.51DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5JM46_9PHAE8.820e-7545.03DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D8LL85_ECTSI9.080e-7042.90DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KH29_9PHAE3.650e-6337.89DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KB08_9PHAE4.470e-6341.69DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L370_9PHAE2.740e-5342.16DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KRJ1_9PHAE1.270e-4838.76DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KLS3_9PHAE9.940e-4841.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYJ9_9PHAE1.020e-4762.10DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig92contigP-lacustris_contig92:65290..67359 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score175.3
Seed ortholog evalue2.7e-41
Seed eggNOG ortholog2880.D7G2E5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DDE superfamily endonuclease
EggNOG OGs2AWDH@1,2RZYI@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1553
Cds size552
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig92.15635.1prot_P-lacustris_contig92.15635.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig92 65488..66039 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817347.1024532-UTR-P-lacustris_contig92:65289..654871622817347.1024532-UTR-P-lacustris_contig92:65289..65487Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig92 65290..65487 -
1693494994.464488-UTR-P-lacustris_contig92:65289..654871693494994.464488-UTR-P-lacustris_contig92:65289..65487Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig92 65290..65487 -
1622817347.1311858-UTR-P-lacustris_contig92:66039..662191622817347.1311858-UTR-P-lacustris_contig92:66039..66219Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig92 66040..66219 -
1693494994.4869266-UTR-P-lacustris_contig92:66039..662191693494994.4869266-UTR-P-lacustris_contig92:66039..66219Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig92 66040..66219 -
1622817347.1447544-UTR-P-lacustris_contig92:66498..668431622817347.1447544-UTR-P-lacustris_contig92:66498..66843Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig92 66499..66843 -
1693494994.4962955-UTR-P-lacustris_contig92:66498..668431693494994.4962955-UTR-P-lacustris_contig92:66498..66843Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig92 66499..66843 -
1622817347.1585312-UTR-P-lacustris_contig92:67081..673591622817347.1585312-UTR-P-lacustris_contig92:67081..67359Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig92 67082..67359 -
1693494994.5064266-UTR-P-lacustris_contig92:67081..673591693494994.5064266-UTR-P-lacustris_contig92:67081..67359Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig92 67082..67359 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817347.113445-CDS-P-lacustris_contig92:65487..660391622817347.113445-CDS-P-lacustris_contig92:65487..66039Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig92 65488..66039 -
1693494994.4772189-CDS-P-lacustris_contig92:65487..660391693494994.4772189-CDS-P-lacustris_contig92:65487..66039Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig92 65488..66039 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig92.15635.1

>prot_P-lacustris_contig92.15635.1 ID=prot_P-lacustris_contig92.15635.1|Name=mRNA_P-lacustris_contig92.15635.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=184bp
MNSPTGEPYLMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNVNMSACR
VTVEWVLKEMTSKWAFVAMKNQQKYLLSPVGVQYKVATLLSNITLMCERG
QPDLSVLRMPSSLFGGVPGCGHLRQRSPHSRRTRVRCVFLSWARRRFCRL
VVISSWRACMAKCFCPVKAKTFCRLNTPVDPSG*
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mRNA from alignment at P-lacustris_contig92:65290..67359-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig92.15635.1 ID=mRNA_P-lacustris_contig92.15635.1|Name=mRNA_P-lacustris_contig92.15635.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2070bp|location=Sequence derived from alignment at P-lacustris_contig92:65290..67359- (Pleurocladia lacustris SAG_25_93)
CCCTGGGCGGCGTTCACTGCTGAACTACTGCAGTTGCCATGGCACGGCTA CGAGCGAAGGAGAGGATCGCACGCAAGACCCGTGCGCTGGCGTTCCTCCA GCTTCGCACGGCGTGCGCCCTTCATTCTCACATGTGGTTCTGGGCGCATA TTGGATTCATCTACACACTCGGTAGGCTCGTTCTAGACGACACCCCAACC CACTTGCCTACGAGGGACATCTTCGAGTTCTTTAGCGCCCAGGACTGCGT CAACTTCCTGCGCTTCACCCGATCCCAGGTGTGCTGCGGATGTATGTGTG GTTTAGGTTGTGCCACAGCAGCAGGGTTAGGCTCAATATACGGGGTTTAC ACAGCAGCAGCAGCGGTGTCCCATAAGTATGTACATAGTCTACTCCGTTC GCGGTTGCAACAACAGTGCGAATGCAAGCAATCCAGGTTGGCAACACAGA AGTGGCGCTGCCGCATTTCTAAACAAATCCCGTATGTCTGCGTTGTTCGC TGCGTTATCTTCGCAGATCATCCTGATGATGGGGATCCTGTGCGTGCCTG ACATGATTCGAACAGACTGCGGCTACGTAGTGTCAGGGCGTACCGCACTC TGTATCCTCCTGTATCGGATGGCGTTTCCATGTCGTTTCAAGAGACATGC GGGTGATATTTCATCTTCCGGATTCACTGCTATGCGAAGCCTTTAACTAC ATGTTGCATTTCATGGACGAGACGTGGGGCCGGCTGCTGACACTCGATAT CGGGAGGTTGGTGCCCCAGCTACCGGTGTTCATGGAAGCCCTCCAAGTCT GGGGGTGTCCCCTGCCCAACTGCTGGGCTTCCATCGACGGCACCGTTCGC GCTATTTGTAGGTAAGCTTGTGGGCACCCACTGTTTGTTGTTGTGAATGC TGCTGTGGGTGCGCTGTCGCCGAAGCCCGGAGGTTTGTTGGGAGAGTTTG CTGCGGTGTTGCTTCATGTTGCTCTCGCGGTTTCAATAAATGTGAAGGAC TTAGAGGGCAGTCGCGATGCCGGATGTGATCCTGGTCGTGTCTGTTTGGC TACTCCTGTAGTAGAAGAGTCAACGCCACGACTATTGCGATAGTACAGGT AGAGTCGTGTTCACAGCACCACTTCCTTTCCGCGCGACAGGCCAAAACGC AACCAGCGAGCCTATTTCAACGGCCACAAGCATTATCATGCCATGAAATT CCAAGGCATCGTCACTCCAGACGGTATCGTGGTGGATCTGTTTGGGCCAG AACTAGGGACAAGGCATGACGTTCATTTGCTGAACGAGTCCGGTGAGCTG AGTTGACGTTGGCGGAGCATATGAACAGCCCGACGGGCGAACCGTATCTC ATGTACGGGGATCCTGCGTACGGGATGAGTACACACCTGAACTGCCCGTA TTCCGCGGAAACTTACGGTCCTCTGACCGCAGGAATGATGGAGTTTAACG TGAACATGAGTGCCTGTCGAGTAACGGTCGAGTGGGTGTTAAAGGAAATG ACTTCGAAGTGGGCTTTTGTGGCCATGAAGAACCAGCAGAAGTACCTACT CAGCCCGGTTGGTGTCCAGTACAAGGTGGCTACGCTGTTGTCCAACATTA CACTAATGTGTGAACGGGGGCAACCAGATCTCTCAGTACTTCGGATGCCC TCCTCCCTCTTTGGAGGAGTACCTGGGTGTGGCCATTTGAGGCAACGTAG CCCGCACTCTCGACGTACCCGTGTGCGTTGTGTTTTTTTGTCTTGGGCGC GAAGGCGTTTTTGTCGGCTTGTAGTCATTTCCTCGTGGCGTGCGTGCATG GCTAAATGTTTTTGCCCGGTGAAGGCCAAAACGTTTTGCAGGTTGAACAC GCCCGTGGACCCATCGGGTTGAAAATATTTGGACTTTTGAAAGCGATGCC GCGTGCGCACGGACACGAGTGTTGGGTTTTGGCTTGGGTTGTGCTTCGAG AGGCCTAGTGGTACCGACGTAGCTCGGTGTTCGGAAAAAAAATAAGTCTA TCGGTAGATTCCGCGTTCCTACTCTACGTTTGTGCCGGAATATGAGCGGC TTTGTACTCCTGGATCTGTG
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Coding sequence (CDS) from alignment at P-lacustris_contig92:65290..67359-

>mRNA_P-lacustris_contig92.15635.1 ID=mRNA_P-lacustris_contig92.15635.1|Name=mRNA_P-lacustris_contig92.15635.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1104bp|location=Sequence derived from alignment at P-lacustris_contig92:65290..67359- (Pleurocladia lacustris SAG_25_93)
ATGAACAGCCCGACGGGCGAACCGTATCTCATGTACGGGGATCCTGCGTA
CGGGATGAGTACACACCTGAACTGCCCGTATTCCGCGGAAACTTACGGTC
CTCTGACCGCAGGAATGATGGAGTTTAACGTGAACATGAGTGCCTGTCGA
GTAACGGTCGAGTGGGTGTTAAAGGAAATGACTTCGAAGTGGGCTTTTGT
GGCCATGAAGAACCAGCAGAAGTACCTACTCAGCCCGGTTGGTGTCCAGT
ACAAGGTGGCTACGCTGTTGTCCAACATTACACTAATGTGTGAACGGGGG
CAACCAGATCTCTCAGTACTTCGGATGCCCTCCTCCCTCTTTGGAGGAGT
ACCTGGGTGTGGCCATTTGAGGCAACGTAGCCCGCACTCTCGACGTACCC
GTGTGCGTTGTGTTTTTTTGTCTTGGGCGCGAAGGCGTTTTTGTCGGCTT
GTAGTCATTTCCTCGTGGCGTGCGTGCATGGCTAAATGTTTTTGCCCGGT
GAAGGCCAAAACGTTTTGCAGGTTGAACACGCCCGTGGACCCATCGGGTT
GAATGAACAGCCCGACGGGCGAACCGTATCTCATGTACGGGGATCCTGCG
TACGGGATGAGTACACACCTGAACTGCCCGTATTCCGCGGAAACTTACGG
TCCTCTGACCGCAGGAATGATGGAGTTTAACGTGAACATGAGTGCCTGTC
GAGTAACGGTCGAGTGGGTGTTAAAGGAAATGACTTCGAAGTGGGCTTTT
GTGGCCATGAAGAACCAGCAGAAGTACCTACTCAGCCCGGTTGGTGTCCA
GTACAAGGTGGCTACGCTGTTGTCCAACATTACACTAATGTGTGAACGGG
GGCAACCAGATCTCTCAGTACTTCGGATGCCCTCCTCCCTCTTTGGAGGA
GTACCTGGGTGTGGCCATTTGAGGCAACGTAGCCCGCACTCTCGACGTAC
CCGTGTGCGTTGTGTTTTTTTGTCTTGGGCGCGAAGGCGTTTTTGTCGGC
TTGTAGTCATTTCCTCGTGGCGTGCGTGCATGGCTAAATGTTTTTGCCCG
GTGAAGGCCAAAACGTTTTGCAGGTTGAACACGCCCGTGGACCCATCGGG
TTGA
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