mRNA_P-lacustris_contig904.15519.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig904.15519.1 vs. uniprot
Match: D7FV78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV78_ECTSI) HSP 1 Score: 436 bits (1122), Expect = 1.410e-140 Identity = 235/304 (77.30%), Postives = 248/304 (81.58%), Query Frame = 3
Query: 15 EDKDARASPGNAGAXXXXXXXXXXXXXXXXXXXXXSGASAAVVSAKPLTEKEMLAADEAKDKLDRMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDVAVYAAELSSQRILRLFYLGMGLAKLLQSTGGTELIRGILQLVEEWEYHFALAGVAHHSVKAMLAKNIDNHGGIPSVMRDRXXXXXXGRSREIGEEGGSKQQEQVVARLLKFNNEVVYEHLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKDFTDISTSIARKELKALR 926
+DKDARAS GNAG +AA V AKPLTEKEMLAADEAKDKLDRMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGD+AVYAAELSSQRILRLFYLG+GLAKLLQS GG ELIRGILQL+EEWEYHFALAGVAHHSVKAMLAKNIDN R R+ EEGG K QEQ+VARL KFNNEVVYE+LLTPEVPF+LDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAK+FTD+ST+IA+ ELK LR
Sbjct: 12 QDKDARASAGNAGGGARPSDVSVPAGGNGTN-------AAAAVYAKPLTEKEMLAADEAKDKLDRMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLELIRGILQLLEEWEYHFALAGVAHHSVKAMLAKNIDN-------------LDHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPFSLDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 295
BLAST of mRNA_P-lacustris_contig904.15519.1 vs. uniprot
Match: A0A836CEB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB8_9STRA) HSP 1 Score: 238 bits (608), Expect = 3.300e-68 Identity = 129/241 (53.53%), Postives = 161/241 (66.80%), Query Frame = 3
Query: 210 MVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDVAVYAAELSSQRILRLFYLGMGLAKLLQS-TGGTELIRGILQLVEEWEYHFALAGVAHHSVKAMLAK-NIDNHGGIPSVMRDRXXXXXXGRSREIGEEGGSKQQEQVVARLLKFNNEVVYEHLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKDFTDISTSIARKELKALR 926
M K++ALV KRK F YLKKTHE G +WLNCVQL R+ D+ YAAE+ R +LFYLG+ LA+LLQS GG ++RG LQL EEWEYHFA G A SV+ ++AK N G G GG + VVARL KF +E+VYEHLLTP +PFALDY EV FSLC+++C++Y K +EEECY N V++ LVKVD K+K H++NV AK+FT++S IAR EL ALR
Sbjct: 1 MTKLQALVEKRKSSFVYLKKTHEGGCYWLNCVQLNRKPDLEAYAAEIPRARTTQLFYLGLSLARLLQSGCGGAAVVRGALQLFEEWEYHFA--GNAAQSVRGLMAKVNTQTQG--------------QGVEGGGSASGGGEDNNPVVARLCKFGSEMVYEHLLTPPLPFALDYFEVFFSLCDIICQVYNKLMEEECYSNVHVFEALVKVDAKVKRHVLNVTAKEFTEMSAKIARSELAALR 225
BLAST of mRNA_P-lacustris_contig904.15519.1 vs. uniprot
Match: A0A7S3MFY2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFY2_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.260e-37 Identity = 96/270 (35.56%), Postives = 148/270 (54.81%), Query Frame = 3
Query: 126 ASAAVVSAKPLTEKEMLAADEAKD---KLDRMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDVAVYAAELSSQRILRLFYLGMGLAKLLQSTGGTELIRGILQLVEEWEYHFALAGVAHHSVKAMLAKNIDNHGGIPSVMRDRXXXXXXGRSREIGEEGGSKQQEQVVARLLKFNNEVVYEHLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKDFTDISTSIARKELKALR 926
+S+A ++ E+E A+E + KL R +++A++ KR+R +YLKK H+ G +WLN + LT +A +S QR+ F LG+ ++K+++ G ++R QL+EEWEY +G SVK M+AKN S + EG S V KFNN VV+EHL P +PF LDYLEV LC + ++Y K + EECY N +YD +V++D ++KHHIIN+ +K+ TD ++ + ++LR
Sbjct: 15 SSSADIANALAEERERKIAEERANAALKLQRKQRLQAMIIKRQRNLAYLKKVHQGGCYWLNTILLTHADLLAYSTKFVSKQRVESFFSLGISISKIVELNAGLPVVRAFSQLMEEWEY--VHSGTTMQSVKFMMAKNSTCVYPQMSPI-----------------EGFSDLARPSV---YKFNNAVVFEHLRLPHIPFELDYLEVFTGLCVELSKLYEKLIHEECYANQIIYDTIVRLDTRVKHHIINLVSKEVTDACSAKMKSNTRSLR 262
BLAST of mRNA_P-lacustris_contig904.15519.1 vs. uniprot
Match: A0A7R9Y7M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7M0_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.380e-35 Identity = 79/217 (36.41%), Postives = 123/217 (56.68%), Query Frame = 3
Query: 210 MVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDVAVYAAELSSQRILRLFYLGMGLAKLLQSTGGTELIRGILQLVEEWEYHFALAGVAHHSVKAMLAKNIDNHGGIPSVMRDRXXXXXXGRSREIGEEGGSKQQEQVVARLLKFNNEVVYEHLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIIN 860
+ + EALV KR F+YLK+ H EGG+WLN V LT+ E+S RI +LF+LG+ L K+L G +++ +LQL EEWEY +AG VK ++AK+ + + S ++ V A L +F++EV+YE L P++ +DY E++ SLCE + +Y KF+E +CY NA ++D L+++D K+K H++N
Sbjct: 63 LAQTEALVAKRTDNFAYLKELHAEGGYWLNVVLLTKSILEDFVRREVSKARIEQLFFLGVSLGKILDIQSGPTVLQAVLQLFEEWEYW--MAGSTTQGVKWVMAKSSAKPHPTTAAVP-------------------SSPEDAVKAGLYRFHSEVIYERLCLPQLSIEIDYFELIISLCETLTLLYKKFLESDCYSNALLFDALMRMDAKVKQHLVN 258
BLAST of mRNA_P-lacustris_contig904.15519.1 vs. uniprot
Match: A0A7S2CN58_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CN58_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.480e-30 Identity = 75/174 (43.10%), Postives = 103/174 (59.20%), Query Frame = 3
Query: 405 LQSTGGTELIRGILQLVEEWEYHFALAGVAHHSVKAMLAKNIDNHGGIPSVMRDRXXXXXXGRSREIGEEGGSKQQEQVVARLLKFNNEVVYEHLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKDFTDISTSIARKELKALR 926
L G + + QL++E+EYHFA + A V+ A+N + P + RE GE+ +K A L +F NEVVY HL TP V F LDY EV+FSLC+V+ +Y KFV+EE ++N+ V+D LVK D++IKHH+IN+ AK+ TD+ST I R E ALR
Sbjct: 1 LDMPAGAVTVEALWQLIQEYEYHFANS--AMQMVRYTTARN--SECVYPQLN-----------PREEGEDEAAK------ANLYRFGNEVVYLHLQTPHVAFELDYREVLFSLCDVLSLLYNKFVDEEIWQNSAVFDMLVKADSRIKHHVINLLAKELTDLSTQILRNEFSALR 153
BLAST of mRNA_P-lacustris_contig904.15519.1 vs. uniprot
Match: A0A8K1C382_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C382_PYTOL) HSP 1 Score: 122 bits (307), Expect = 7.770e-26 Identity = 84/255 (32.94%), Postives = 139/255 (54.51%), Query Frame = 3
Query: 207 RMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDVAVYAAELSS-QRILRLFYLGMGLAKLLQSTGGTE-LIRGILQLVEEWEYHFALAGVAHHSVKAMLAKNIDNHGGIPSVMRDRXXXXXXGRSREIGEEGGSKQQEQVVARLLKFNNEVVYEHLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEE-CYKNAFVYDGLVKVDNKIKHHIINVFAKDFTDISTSIARKELKALR*ESRGRGGWSSV 962
RM +E LV R+ +SYLK HE WLN + + R+ V + E S +R ++ FYLG+GL +L+ + L QL+EE E++F+ A V S+K M+A + P++ + ++ +EG E + K+N V+ LLTP +PF LDY EV+ SLC+++ +Y+KFVE+ C +N F++ +V+ D KIK +I+ K+F+ ++ S+ EL ++R ++ GG S +
Sbjct: 177 RMHILEELVQHRRHDWSYLKAMHEGTNHWLN-IAVLRESQVLAHLGEKQSIRRSVQFFYLGLGLGRLISDVRHAQFLAMEGCQLLEELEFYFSSATV--QSMKLMVATST------PTLHQPLH---------KMDDEGIYSVDEPFRPTIYKWNQRPVFRRLLTPSIPFPLDYREVMLSLCDILALVYSKFVEDNICSENIFLFQAIVRFDEKIKKLVIDPVKKEFSAVAASVLNDELTSVR-KAFSSGGGSQI 412
BLAST of mRNA_P-lacustris_contig904.15519.1 vs. uniprot
Match: A0A4D9CUK2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUK2_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.080e-24 Identity = 82/273 (30.04%), Postives = 136/273 (49.82%), Query Frame = 3
Query: 207 RMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDVAVYAAELSSQRILRLFYLGMGLAKLLQ----------STGGTEL--------------------IRGILQLVEEWEYHFALAGVAHHSVKAMLAKNIDNHGGIPSVMRDRXXXXXXGRSREIGEEGGSKQQEQVVARLLKFNNEVVYEHLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECY---KNAFVYDGLVKVDNKIKHHIINVFAKDFTDISTSIARKELKALR 926
R V+++ALV KR Y++K HE G +WL+ V L++ +++ S R + F+LG+ ++ LL+ S GG+E +R + QL EE EYH + + ++K +LAK+ID P + E + R+ +F+NEVV+++ P +PF LDYLEV+ SLC + +Y + ++A +++ LVK+D K+KHHIIN AK+ T ++T +A++EL+ R
Sbjct: 38 RHVQLQALVEKRILNLDYIRKVHEGGQYWLHTVLLSQNVIHHYVRSQVPSSRAIVFFHLGVSVSPLLEAPSALRPHPHSGGGSESAAVSEGEERRCSGKEECIAQLRSLAQLFEEMEYHTSTGAL--QAMKFLLAKSIDTP--FPEQAPE----------------------EPINPRIFRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGHRHAASLERDAALFEVLVKIDAKVKHHIINPIAKELTSLATRLAKQELEGWR 284
BLAST of mRNA_P-lacustris_contig904.15519.1 vs. uniprot
Match: A0A484EBJ4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBJ4_BRELC) HSP 1 Score: 112 bits (281), Expect = 8.440e-23 Identity = 71/242 (29.34%), Postives = 124/242 (51.24%), Query Frame = 3
Query: 207 RMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDVAVYAAELSSQRILRLFYLGMGLAKLLQSTGGTELIR-GILQLVEEWEYHFALAGVAHHSVKAMLAKNIDNHGGIPSVMRDRXXXXXXGRSREIGEEGGSKQQEQVVARLLKFNNEVVYEHLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEE-CYKNAFVYDGLVKVDNKIKHHIINVFAKDFTDISTSIARKELKALR 926
RM +E L+ R+ ++YLK HE +WLN L Q + + S+R + FYLG+GL KL++ T EL+ QL+EE E+ FA V S+K M+A + S + D+ +E + K+N +Y L+TP +PF LDY EV+ SLC+++ +Y+K +E+ +N ++ +++ DN+I+ +I+ K+F ++ + +E++ +R
Sbjct: 141 RMKILEELIQHRRFDWNYLKTMHEGSNYWLNIALLREQQVLQYIGKKPRSRRSAQFFYLGLGLGKLVEETPHPELLAMNCCQLLEELEFFFASTAV--QSMKMMVATS--------STLYDKENFDAY------------STEEAFRPSVYKWNQRPMYRRLMTPPIPFPLDYREVLLSLCDILALVYSKLIEDNGASENIHLFQSILRFDNRIQKLVIDPIKKEFAAVAAQVVAEEMRLVR 360
BLAST of mRNA_P-lacustris_contig904.15519.1 vs. uniprot
Match: A0A7S2GL83_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GL83_9STRA) HSP 1 Score: 102 bits (253), Expect = 9.200e-22 Identity = 48/92 (52.17%), Postives = 68/92 (73.91%), Query Frame = 3
Query: 651 LLKFNNEVVYEHLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKDFTDISTSIARKELKALR 926
L + ++E+VY HL+TP VPF +DY+EV+ SLC+V+ +Y K V E +++ VYD LV+VD++IKHHIIN AK+ TD+S SI R+EL R
Sbjct: 4 LFRSSHEIVYMHLVTPHVPFPIDYVEVIHSLCDVLVLVYHKLVHCESWQSPAVYDMLVRVDSRIKHHIINRIAKELTDLSISILRRELLEYR 95
BLAST of mRNA_P-lacustris_contig904.15519.1 vs. uniprot
Match: A0A3M6V7K3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V7K3_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.630e-21 Identity = 76/243 (31.28%), Postives = 129/243 (53.09%), Query Frame = 3
Query: 207 RMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDVAVYAAELSS-QRILRLFYLGMGLAKLL-QSTGGTELIRGILQLVEEWEYHFALAGVAHHSVKAMLAKNIDNHGGIPSVMRDRXXXXXXGRSREIGEEGGSKQQEQVVARLLKFNNEVVYEHLLTPEVPFALDYLEVVFSLCEVMCRIYAKFV-EEECYKNAFVYDGLVKVDNKIKHHIINVFAKDFTDISTSIARKELKALR 926
RM +E LV R+ ++YLK HE +WLN V L R+ +V Y + S +R + FYLG+GL KL+ S G +L QL+EE E+HF+ + V +K M+A + H + + S E + E + K+N VY L+TP +PF LDY EV+ SLC+++ +Y+K + + +N V+ +++ D++IK I+ K+F+ +++ + +E++ +R
Sbjct: 172 RMTILEHLVQDRRSDWNYLKIMHEGSNYWLN-VALLREQEVMKYLGDKQSIRRGTQFFYLGLGLGKLVGDSMHGKQLAIECCQLLEELEFHFSSSTV--QGMKMMVATSSTLHEPLDTKN-----------SLEFSSD------EPFRPIMHKWNQRPVYRRLMTPPIPFPLDYREVLLSLCDILALVYSKLIGDSSASENVNVFQAIIRFDDRIKKLFIDPVKKEFSAVASQVMAEEMRLVR 394 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig904.15519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig904.15519.1 >prot_P-lacustris_contig904.15519.1 ID=prot_P-lacustris_contig904.15519.1|Name=mRNA_P-lacustris_contig904.15519.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=253bp MLAADEAKDKLDRMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQback to top mRNA from alignment at P-lacustris_contig904:38421..49113- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig904.15519.1 ID=mRNA_P-lacustris_contig904.15519.1|Name=mRNA_P-lacustris_contig904.15519.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10693bp|location=Sequence derived from alignment at P-lacustris_contig904:38421..49113- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig904:38421..49113- >mRNA_P-lacustris_contig904.15519.1 ID=mRNA_P-lacustris_contig904.15519.1|Name=mRNA_P-lacustris_contig904.15519.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1518bp|location=Sequence derived from alignment at P-lacustris_contig904:38421..49113- (Pleurocladia lacustris SAG_25_93)back to top |