mRNA_P-lacustris_contig9.15461.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig9.15461.1 vs. uniprot
Match: D7FLD2_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD2_ECTSI) HSP 1 Score: 1158 bits (2995), Expect = 0.000e+0 Identity = 660/921 (71.66%), Postives = 711/921 (77.20%), Query Frame = 3
Query: 417 PVELAYEETAGPSDETAPTRDPGRRASFYDXXXXXXXX-FESPKKKRQRNPNQKVGSTAP----ASPADSHGSDERDLRP--PGSSKPMSKTSTPN-VKLNKQNNEAKPRTRR-RTPRVYFCSRTHSQLNQVVAELRTCRTAFQGTSAVGIGDDGKPFSMTLLAPRTSTCINKEACSDPKGIDDACKRLLKEKACSYYS---------------------------------------------PYNYLVDPGVREIMGINLKDAVVIFDEAHNLEDSAREAASAKLSLRFLANAAGEMHRLGAKSTSLAPAYDLLRSVIVGVQAFLEEEDSCLNIGSYEKAHKVYKGAEALGLMQSRAGVTSESLVHLKEALRMVVNEEANVDPYDTRDQENGTEGSGQGHGGEVLSSGSLHVTASLVKVLSFLLTDGMENVDHYKMVVLRERGPWEPAASRPRGRRARNREGAGSITAMETYLCFWCQSASTCFSEIDKQVHSIVLTSGTLSPLDSFAGELGIEFPHRLEANHVIDVKKQCLVTSVGFFGGVSLDARFTNQHDLKYQDALGNALLQHARVVPGGMLVFFPSYGLMDKMHDRWKVTGLLQALDAIKGIYLEPRGPGKIDVVLAEYYDDIKAARE---SKANNY-LSTRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRMRDPRLVGGRAWYNLQAFRAVNQAVGRQGGDMCIRHRHDFGAIVLCDPRYASSTETTASLSKWVRSSVKQCRNVEMSLPQVDAFFRQHE-QRDQHHGVA-ESSVPFGIVSPSTGCDGGDENAGCCAAGSSRM-DSGGSRGQ-EQKPESAAEGSPEAKFVQQSLSQMFRNSVAASTPIQDTANGRTPSILQANNGRTVLQPFSQRTNNPVTYLYRRKTRH 2993
P+ELAYE+ P + P G R SFYD XXXXX FESPKKKRQ+N + + +P A DSH P P KP S+ TP+ VK K+ K RR R PRVYFCSRTHSQLNQVVAELRTCRTAFQ TSAVGIGDDGKPFSM LLA R STCIN+EACSDPKGIDDACKRLLKEKAC+YY PYNYLVDPGVREIMGINLK+AVVIFDEAHNLEDSAREAASAKLSLR LANAAGEMHRLGAKS SL+P+YDLLR VI+GVQAFLEEEDS L IGSYEKAHKVYKGAEALGLMQSRAGVTSESLV+LKEAL+MV+NE+ N DPY RDQ +G + G EVLSSGS+HVTASLVKVL FLLT+GMENVDHYKMVVLRERGPWEP +SR GRR RNR G+GSITAMETYLCFWCQSASTCFSEIDKQVHS+VLTSGTLSP++SFAGELGIEFPHRLEANHVI+VKKQCLVTSVG+FG VSLDAR+TNQHDLKYQDALGNALLQHARVVPGG+LVFFPSYGLMDKMHDRW+VTGLLQAL IKG+YLEPRG GKID VLAEYY+DI AARE SK N Y STRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRR RDPRLVGGRAWY+LQAFRAVNQAVGR CIRHR DFGAIVLCDPRYASSTETTASLSKWVRSSV+QCR+VE+SLP V+AFFRQH+ Q+DQHH V E+S G S GGD +AGCCA G++ D G SRG E KPE AAEGS + VQQSLSQMFR AAS P D ANG S+ Q +GRT LQ SQ T V + T H
Sbjct: 114 PIELAYEDAVEPGKQEEPA---GDRTSFYDDYDXXXXXXFESPKKKRQKNKDVEEEIDSPENSDAPHRDSHQDSPDSPVPDEPNLGKPPSEAVTPDDVKPKKRGKAVKQEARRKRAPRVYFCSRTHSQLNQVVAELRTCRTAFQDTSAVGIGDDGKPFSMALLASRKSTCINREACSDPKGIDDACKRLLKEKACTYYRRAKWAQTKLPPVWDVEEAVRMGQENQACPYYTARASLVNADLVLCPYNYLVDPGVREIMGINLKNAVVIFDEAHNLEDSAREAASAKLSLRALANAAGEMHRLGAKSLSLSPSYDLLRGVIIGVQAFLEEEDSRLTIGSYEKAHKVYKGAEALGLMQSRAGVTSESLVYLKEALKMVINEDGNADPY-ARDQADGASFDHRLGGDEVLSSGSVHVTASLVKVLGFLLTEGMENVDHYKMVVLRERGPWEPVSSR--GRRGRNRPGSGSITAMETYLCFWCQSASTCFSEIDKQVHSVVLTSGTLSPMNSFAGELGIEFPHRLEANHVINVKKQCLVTSVGYFGKVSLDARYTNQHDLKYQDALGNALLQHARVVPGGILVFFPSYGLMDKMHDRWEVTGLLQALQEIKGVYLEPRGQGKIDGVLAEYYEDIAAARENQSSKENQYHSSTRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRTRDPRLVGGRAWYSLQAFRAVNQAVGR-----CIRHRSDFGAIVLCDPRYASSTETTASLSKWVRSSVRQCRSVEVSLPLVEAFFRQHQPQKDQHHAVQPEASACAGSSSV-----GGDGDAGCCAGGNNGTGDCGESRGGLEHKPEGAAEGSLDPGLVQQSLSQMFRQGCAASNPTDDPANGGAASLTQGTDGRTALQLLSQGTTTNVPRVNPTITAH 1018
BLAST of mRNA_P-lacustris_contig9.15461.1 vs. uniprot
Match: A0A6H5JGC9_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC9_9PHAE) HSP 1 Score: 992 bits (2564), Expect = 0.000e+0 Identity = 619/1069 (57.90%), Postives = 682/1069 (63.80%), Query Frame = 3
Query: 417 PVELAYEETAGPSDETAPTRDPGRRASFYDXXXXXXXX------------------FESPKKKRQRNPNQKVGSTAPASPADSHGSDERDLRPPGSSKPMSKTSTP-NVKLNKQNNEAKP----RTRRRTPRVYFCSRTHSQLNQVVAELRTCRTAFQGTSAVGIGDDGKPFSMTLLAPRTSTCINKEACSDPKGIDDACKRLLKEKACSYYSPYNYLVDPGVREIMGINLKDAVVIFDEAHNLEDSAREAASAKLSLRFLANAAGEMHRLGAKSTSLAPAYDLLRSVIVGVQAFLEEEDSCLNIGSYEKAHKVYKGAEALGLMQSRAGVTSESLVHLKEALRMVVNEEANVDPYDTRDQENGTEGSGQGHGG-EVLSSGSLHVTASLVKVLSFLLTDGMENVDHYKMVVLRERGPWEPAASRPRGRRARNREGAGSITAMETYLCFWCQSASTCFSEIDKQVHSIVLTSGTLSPLDSFAGELGIEFPHRLEANHVIDVKKQCLVTSVGFFGGVSLDARFTNQHDLKYQDALGNALLQHARVVPGGMLVFFPSYGLMDKMHDRWKV-TGLLQALDAIKGIYLEPRGPGKIDVVLAEYYDDIKAARE---SKANNY-LSTRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRMRDPRLVGGRAWYNLQAFRAVNQAVGRQGGDMCIRHRHDFGAIVLCDPRYASSTETTASLSKWVRSSVKQCRNVEMSLPQVDAFFRQHE-QRDQHHGVAESSVPFGIVSPSTGCDGGDENAGCCAAGSSRM-DSGGSRGQ-EQKPESAAEGSPEAKFVQQSLSQMFRNSVAASTPIQDTANGRTPSILQANNGRTVLQPFSQ-------RTNNPVTY----------------LYRRKTRHVSILSPGGQMVVCGVERRCARRGLAACDLGSR--GATSGART---GEFSPLPHERRPDGLRRG---VQYVERGQQRWVE*HDNRARGTTRLAAG*KRVRGRRAVGGE*RGRVH-PLYCSCPGCRLTQIGEKAVGAGLNGHDVIGRAWFFPTRVLA 3431
P++LAYE+ P + P G R SFYD XXXXX +SP+ P+ +P SP +DE DL SKP S TP +VK K+ K R+R PRVYFCSRTHSQLNQVVAELRTCRTAFQ TSAVGIGDDGKPFSM LLA R S CIN EAC+DPKGIDDACKRLLKEKAC+YYSPYNYLVDPGVREIMGI+LK+AVVIFDEAH KVYKGAEALGLMQSRAGVTSESLV+LKEAL+MV++E+ N DPY RDQ +G G GHGG EVLSSGS HVTASLVKVL FLLT+GMENVDHYKMVVLRERGPWEP +SR GRR RNR G+GSITAMETYLCFWCQSASTCFSEIDKQVHS+VLTSGTLSP++SFAGELGIEFPHRLEANHVI+VKKQCLVTSVG+FG VSLDAR+TNQHDLKYQDALGNALLQHAR+VPGG+LVFFPSYGLMDKMHDRW+V TGLLQAL IKGIYLEPRG GKID VLAEYY+D+ AARE SK N Y STRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRR RDPRLVGGRAW CIRHR DFGAIVLCDPRYASSTETTASLSKWVRSSV+QCR+VE+SLP V+AFFRQH+ Q+DQHH V P + GGD CCA G+ D G SRG E KPE AE S + VQQSLSQM AAS P D ANG S+ Q +GRT LQ SQ R N +T L+ RK + +P G M GV+ +A+ L TS T G LP + RG V+ V +G+ RWV G+ G V+ PLYC CPGCRL IGEK + AGL + IG AWFFP+ V A
Sbjct: 85 PIKLAYEDAVEPGKQEEPV---GDRTSFYDDYDXXXXXXXXXXXXXXXXXXXXXXMIDSPES--SDGPHHDSHQDSPDSPV----ADEPDL-----SKPPSDAVTPADVKPKKRGKAVKAVKQEARRKRVPRVYFCSRTHSQLNQVVAELRTCRTAFQDTSAVGIGDDGKPFSMALLASRKSMCINSEACNDPKGIDDACKRLLKEKACTYYSPYNYLVDPGVREIMGIDLKNAVVIFDEAH----------------------------------------------------------------------KVYKGAEALGLMQSRAGVTSESLVYLKEALKMVMSEDGNADPY-ARDQVDGAS-FGHGHGGDEVLSSGSAHVTASLVKVLGFLLTEGMENVDHYKMVVLRERGPWEPVSSR--GRRGRNRLGSGSITAMETYLCFWCQSASTCFSEIDKQVHSVVLTSGTLSPMNSFAGELGIEFPHRLEANHVINVKKQCLVTSVGYFGKVSLDARYTNQHDLKYQDALGNALLQHARIVPGGILVFFPSYGLMDKMHDRWEVVTGLLQALQEIKGIYLEPRGQGKIDGVLAEYYEDVAAARENQSSKENQYHSSTRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRTRDPRLVGGRAW--------------------CIRHRSDFGAIVLCDPRYASSTETTASLSKWVRSSVRQCRSVEVSLPLVEAFFRQHQPQQDQHHAVQ----PEASACAGSSFVGGDGEVRCCAGGNDGTGDFGESRGGLEHKPEGEAERSLDPGLVQQSLSQMLGQGCAASNPTDDPANGGAASLTQGTDGRTALQLLSQGSTTNVPRVNPTITAHEKPHADPEPRRPEGSLWCRKGGALISGAPRGAMSGVGVDGPRLATAMASTHLYRTIIALTSDCTTSSGGREDVLPDAATVIEVPRGWPLVEKVSQGEGRWVA--------------------------GD--GLVYAPLYCPCPGCRLAHIGEKVIAAGLGFQETIGLAWFFPSLVHA 1013
BLAST of mRNA_P-lacustris_contig9.15461.1 vs. uniprot
Match: A0A2D4BU49_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU49_PYTIN) HSP 1 Score: 439 bits (1128), Expect = 4.600e-133 Identity = 266/698 (38.11%), Postives = 395/698 (56.59%), Query Frame = 3
Query: 738 PRVYFCSRTHSQLNQVVAELRTCRTAFQGTSAVGIGDDGKPFSMTL----LAPRTSTCINKEACSDPKGIDDACKRLLKEKACSYYS------------------------------------------------PYNYLVDPGVREIMGINLKDAVVIFDEAHNLEDSAREAASAKLSLRFLANAAGEMHRLGAKSTSLAPAYDLLRSVIVGVQAFLEE----EDSCLNIGSYEKAHKVYKGAEALGLMQSRAGVTSESLVHLKEALRMVVNEEANVDPYDTRDQENGTEGSGQGHGGEVLSSGSLHVTASLVKVLSFLLTDGMENVDHYKMVVLRERGPWEPAASRPRGRRARNREGAGSITAMETYLCFWCQSASTCFSEIDKQVHSIVLTSGTLSPLDSFAGELGIEFPHRLEANHVIDVKKQCLVTSV-GFFGGVSLDARFTNQHDLKYQDALGNALLQHARVVPGGMLVFFPSYGLMDKMHDRWKVTGLLQALDAIKGIYLEPRGPGK-IDVVLAEYYDDIKAARESKANNYLSTRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRMRDPRLVGGRAWYNLQAFRAVNQAVGRQGGDMCIRHRHDFGAIVLCDPRYASSTETTASLSKWVRSSVKQCRNVEMSLPQVDAFFRQHEQRDQHHGVAESSVP 2657
P+++FCSRTHSQL QVV EL++C T++ + D P++ L L ++ C+N + DP +DD C+ L+ CSY+ PYNYL+DP +RE +GI+LK+A+V+ DEAHN+ED+ R +AS +L+L LA A + K + P + V+ G+ +L++ S L +E KV+ G + + + G+T E+ ++E LR VV+ E + T +E G +G GG+ L + +L S++ V ++ D + +D +K++V+++R + SR RG N +GS + E LC WC +A+ FS++ +QV S++LTSGTLSP+DSFAGELG EFP RLEA+HV+D+++Q + +V GGV L + NQ + ++QD++G L Q+A+VVPGG+L+FFPSY LM+K+ RW+ TG+ ++ K ++ EPR GK D +L Y I A + ST TGA+ LAV RGKVSEGIDFS+ AR + VGIP+PS K+LQV LK++YQD++ D LV G AWY+LQAFRA+NQA+GR CIRHR D+GAI+L D RY T SLSKW+R V++ + + + Q+ AFF E+ G+ ++P
Sbjct: 215 PQIFFCSRTHSQLAQVVDELKSCPTSYLDSP-----DISNPYADQLKTCVLGAKSHYCVNAKVNRDPSELDDKCRTALENNGCSYFRKRKKTNDLRRVTPAIWDLEDLVKLAKKHRECAFFHARDALNGANIVFCPYNYLLDPTIRESVGISLKNAIVVLDEAHNVEDTCRSSASIELTLEGLALAILAFTNV-IKKGNRPPCFLSQLKVLNGLHRWLKQIASSSSSVLQPTGFEXESKVWSGTDCIAMFAEYTGMTHETYDAIREDLRAVVDYEKQLQQTTTEGEEGGE--AGDDSGGQRLPAAALTTIRSVLNVAGYMYRDNLRYLDDFKLIVMKKRSHQRSSGSRSRGY---NNMSSGS-SEWEFKLCIWCLNAAVAFSDVVRQVRSVILTSGTLSPMDSFAGELGTEFPIRLEASHVVDMRRQVFIGAVMNGPGGVDLSCVYRNQQEFRFQDSMGELLHQYAQVVPGGLLMFFPSYMLMEKLETRWRQTGVWARIEERKKVFKEPRQAGKDFDALLDSYKRTIATAMMTTG----STLTGAVFLAVYRGKVSEGIDFSNANARCVLAVGIPFPSVKELQVALKRKYQDEKSKVDRVLVSGSAWYSLQAFRALNQALGR-----CIRHRSDYGAIILVDSRYRFQAHTR-SLSKWIRPFVREFEHAQDCVAQLPAFF---ERNASEFGLGVPTLP 887
BLAST of mRNA_P-lacustris_contig9.15461.1 vs. uniprot
Match: A0A3F2RKI7_9STRA (Helicase ATP-binding domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RKI7_9STRA) HSP 1 Score: 437 bits (1125), Expect = 1.340e-132 Identity = 256/705 (36.31%), Postives = 398/705 (56.45%), Query Frame = 3
Query: 738 PRVYFCSRTHSQLNQVVAELRTCRTAFQGTSAVGIGDDGKPFSMTL----LAPRTSTCINKEACSDPKGIDDACKRLLKEKACSYY------------------------------------------------SPYNYLVDPGVREIMGINLKDAVVIFDEAHNLEDSAREAASAKLSLRFLANAAGEMHRLGAKSTSLAPAYDLLRSVIVGVQAFLE----EEDSCLNIGSYEKAHKVYKGAEALGLMQSRAGVTSESLVHLKEALRMVVNEEANVDPYDTRDQEN--GTEGSGQGHGGEVLSSGSLHVTA--SLVKVLSFLLTDGMENVDHYKMVVLRERGPWEPAASRPRGRRARNREGAGSITAMETYLCFWCQSASTCFSEIDKQVHSIVLTSGTLSPLDSFAGELGIEFPHRLEANHVIDVKKQCLVTSVGFF-GGVSLDARFTNQHDLKYQDALGNALLQHARVVPGGMLVFFPSYGLMDKMHDRWKVTGLLQALDAIKGIYLEPRGPGK-IDVVLAEYYDDIKAARESKANNYLST-----RTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRMRDPRLVGGRAWYNLQAFRAVNQAVGRQGGDMCIRHRHDFGAIVLCDPRYASSTETTASLSKWVRSSVKQCRNVEMSLPQVDAFFRQHEQRDQHHGVAESS 2651
PR+YFCSRTHSQL QVV EL+ C +F + +D F+ L L + + C+N++ DP +D+ C+ L+ ++CSY+ +PYNYL+DP +RE +GI LKD++++ DEAHN+ED+ R +AS +++ L AA + + K + Y+ L ++ G+ +L+ ++ L ++ KV+ G +AL ++ +G+T ++L +K+ ++ V E+ + QE T+ + G + G+L +T S++ V+ ++ D ++ ++ +K+VV++ + W+ + E + +C WC +A+ FS+I + S++LTSGTLSP+DSFAGELG+ FP RLEANHV++++KQ + S+ G V L + + NQ D KYQD++G LLQ+++ +PGG+L+FFPSY L++K+ RWK T L ++ K +Y EPR GK D +L +Y D I A + + +T +TGA+ LAV RGKVSEGIDFSDD AR + VGIP+P+ KDLQV LK++YQDQ+ DP+LV G WYNLQAFRA+NQA+GR CIRHR D+GAI+L D R+ + T SLSKW+R +++ + +M LP FF +H + + H V S+
Sbjct: 258 PRIYFCSRTHSQLAQVVDELKHCPVSFLESP-----EDSNTFTNQLQTCILGSKRNYCVNQKVNKDPSQVDEKCRLALEGQSCSYFRKRKRVNDLRRAVPPVWDIEDIVKLAQRHRECAYFHAREALDHANIVFAPYNYLLDPTIREAVGITLKDSIIVLDEAHNVEDTCRSSASVEVTTEVL-EAAIKAFSIVIKHGNRPKTYNALLKLLNGINRWLQAVNNNANTILQNSGFDVKSKVWDGVDALAMLAEYSGLTHDTLAEMKKNMQDVREYESELTSNGESSQEQTPATQDAAANPSGASVVLGALALTTVESIMHVVDYMFRDQLKYLNDFKLVVIKSKAQWQEGGKFLSPTKRNGNE-------WQLKMCIWCLNAAVAFSDIANEARSVILTSGTLSPMDSFAGELGVNFPIRLEANHVVNMRKQVFIGSIMRGPGNVDLQSTYNNQQDPKYQDSMGQVLLQYSQSIPGGILMFFPSYSLLNKLSTRWKQTKLWGEIEQFKTVYTEPRNAGKDFDALLEDYKDTIVAYSSTLPSGMGTTNGQPEKTGAIFLAVYRGKVSEGIDFSDDNARAVLCVGIPFPNVKDLQVSLKRKYQDQKSRMDPKLVNGHVWYNLQAFRALNQALGR-----CIRHRRDYGAIMLIDSRHRFNAHTK-SLSKWMRPYIQEFEHSQMCLPMFSNFF-EHNRLELPHAVPASA 942
BLAST of mRNA_P-lacustris_contig9.15461.1 vs. uniprot
Match: A0A662WP93_9STRA (Helicase ATP-binding domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WP93_9STRA) HSP 1 Score: 435 bits (1118), Expect = 1.580e-131 Identity = 263/712 (36.94%), Postives = 398/712 (55.90%), Query Frame = 3
Query: 738 PRVYFCSRTHSQLNQVVAELRTCRTAFQGTSAVGIGDDGKPFSMTLLAPRTSTCINKEACSDPKGIDDACKRLLKEKACSYYS------------------------------------------------PYNYLVDPGVREIMGINLKDAVVIFDEAHNLEDSAREAASAKLSLRFLANAAGEMHRLGAKSTSLAPAYDLLRSVIVGVQAFLEEEDS----CLNIGSYEKAHKVYKGAEALGLMQSRAGVTSESLVHLKE---ALRMVVNEEANVDPYDTRDQEN----GTEGSGQGHGGEVLSSGSLHVTASLVKVLSFLLTDGMENVDHYKMVVLRERGPWEPAASRPRGRRARNREGAGSITAMETYLCFWCQSASTCFSEIDKQVHSIVLTSGTLSPLDSFAGELGIEFPHRLEANHVIDVKKQCLVTSV-GFFGGVSLDARFTNQHDLKYQDALGNALLQHARVVPGGMLVFFPSYGLMDKMHDRWKVTGLLQALDAIKGIYLEPRGPGK-IDVVLAEYYDDIKA------ARESKANNYLSTRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRMRDPRLVGGRAWYNLQAFRAVNQAVGRQGGDMCIRHRHDFGAIVLCDPRYASSTETTASLSKWVRSSVKQCRNVEMSLPQVDAFFRQHEQRDQHHGVAES-SVPFGIV 2669
PR+YFCSRTHSQL QVV EL++C ++ + G +L + + C+N + D +D+ C+ L+ K+CS++ PYNYL+DP +R +GINLK+A+++ DEAHN+ED+ R +AS +L+ LA AA + + K S Y++L ++ G+ +L+ +S L +E+ KV+ GA+AL ++ +G+T +++ +KE A+R NE +N + QE+ G + +L S +L S++ V+ ++ D + +D +K+VV++ R PW G R ++ + + + +C WC +A+ FS+I Q S++LTSGTLSP+DSFAGELG EFP RLEANHV++++KQ + S+ G V L + + NQ + KYQD++G LLQ+++V+PGG+L+FFPSY L++K+ RWK TGL +D K ++ EPR GK D +L EY I + A KA + +TGA+ LAV RGKVSEGIDFS+D AR + VGIP+PS K+LQV LK++YQDQ+ D +LV G WY LQAFRA+NQA+GR CIRHR D+GAI+L D R+ + T SLSKW+R +++ + + P FF ++ H A + S P ++
Sbjct: 227 PRIYFCSRTHSQLAQVVDELKSCPASYLESPEAG-NAYATQLQTCVLGSKRNYCVNPKVSRDATKVDENCRLALEGKSCSFFRKRKRVNDLRRVAPAVWDIEDLVALAKKHRECAYFHSREALDHANIVFCPYNYLLDPSIRAAVGINLKNAIIVLDEAHNVEDTCRSSASVELTTDVLA-AAIKAFSVVIKHGSRPTTYNMLLKLLNGINRWLQGVNSNSRAILQPSGFEEESKVWDGADALAMLAEYSGLTRDNVGAMKECVKAVREYENELSNSGEQSQQQQESAPKEGDAAANPSGASVLLGSLALSTVESIMNVVDYMFRDESKYLDDFKLVVIKSRVPWRG------GGRFQSPNKSSNGNEWQLKMCLWCLNAAVAFSDIVSQARSVILTSGTLSPMDSFAGELGTEFPIRLEANHVVNMRKQVFIGSIMNGPGYVDLSSTYKNQQEFKYQDSMGQLLLQYSQVIPGGVLMFFPSYSLLNKLSTRWKQTGLWDQMDKFKTVFTEPRNAGKDFDALLDEYKSTIASLSGNLPAGPGKAAEN-AEKTGAIFLAVYRGKVSEGIDFSNDNARAVLCVGIPFPSVKELQVSLKRKYQDQKSRMDTKLVNGHVWYQLQAFRALNQALGR-----CIRHRQDYGAILLLDSRHRFNAHTK-SLSKWMRPFIQEFEHSQQCTPLFGEFFARNRLEFPHVVAAPAASAPLMVL 923
BLAST of mRNA_P-lacustris_contig9.15461.1 vs. uniprot
Match: A0A225WZ18_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZ18_9STRA) HSP 1 Score: 433 bits (1113), Expect = 6.240e-131 Identity = 253/691 (36.61%), Postives = 393/691 (56.87%), Query Frame = 3
Query: 738 PRVYFCSRTHSQLNQVVAELRTCRTAFQGTSAVGIGDDGKPFSMTL----LAPRTSTCINKEACSDPKGIDDACKRLLKEKACSYY------------------------------------------------SPYNYLVDPGVREIMGINLKDAVVIFDEAHNLEDSAREAASAKLSLRFLANAAGEMHRLGAKSTSLAPAYDLLRSVIVGVQAFLEEEDSCLNI----GSYEKAHKVYKGAEALGLMQSRAGVTSESLVHLK---EALRMVVNEEANVDPYDTRDQENGTEGSGQGHGGEVLSSGSLHVTA--SLVKVLSFLLTDGMENVDHYKMVVLRERGPWEPAASRPRGRRARNREGAGSITAMETYLCFWCQSASTCFSEIDKQVHSIVLTSGTLSPLDSFAGELGIEFPHRLEANHVIDVKKQCLVTSVGFF-GGVSLDARFTNQHDLKYQDALGNALLQHARVVPGGMLVFFPSYGLMDKMHDRWKVTGLLQALDAIKGIYLEPRGPGK-IDVVLAEYYDDIKAARESKA---NNYLSTRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRMRDPRLVGGRAWYNLQAFRAVNQAVGRQGGDMCIRHRHDFGAIVLCDPRYASSTETTASLSKWVRSSVKQCRNVEMSLPQVDAFFRQH 2612
PR++FCSRTHSQL QVV EL+ C A+ + +D ++ L L + + C+N++ DP +D+ C+ L+ +CSY+ +PYNYL+DP +R+ +GI+LKD++V+ DEAHN+ED+ R +AS +++ LA A+ + + K + Y+ L ++ G+ +L+ DS N Y++ KV+ GA+AL ++ +G+T ++L +K + +R NE N + Q ++ + G + G+L + S++ V+ ++ D ++ VD +K+VV++ + W+ S R+ S E +C WC +A+ FS+I Q S++LTSGTLSP++SFAGELG++FP RLEANHV++++KQ + +V G V L + + NQ D +YQD++G LLQ+++ +PGG+L+FFPSY L++K+ RWK T L ++ K IY EPR GK D +L +Y D I S N +T TGA+ LAV RGKVSEGIDFS+D AR + VGIP+PS K+LQV LK++YQD++ + +LV G WY LQAFRA+NQA+GR CIRHR D+GAI+L D R+ + T SLSKW+R +++ + +M +P FF+++
Sbjct: 210 PRIFFCSRTHSQLAQVVDELKNCPVAYLDSP-----EDSNTYTNQLQTCVLGSKRNMCVNRKVNRDPSQVDEKCRLALEGSSCSYFKKRKKTNDLRRTVPPVWDIEDLVKLAQKHRECAYFHSREALDHANIVFAPYNYLLDPTIRDAVGISLKDSIVVLDEAHNVEDTCRSSASVEVNDEVLA-ASIKAFSIVIKHGNRPKTYNALLKLLNGISRWLQSVDSNANAILQPSGYDEKSKVWDGADALAMLAEYSGLTKDNLAEMKANVQEVREYENELGNSADSSQQPQTQASQDAAANPTGSSVLLGALALATVQSIMNVVDYMFRDSLKYVDDFKLVVIKSKSTWKDNTS------FRSPTKRNSGDEWELKMCIWCLNAAVAFSDIASQARSVILTSGTLSPMESFAGELGVDFPIRLEANHVVNMRKQVFIGAVMHGPGNVDLQSTYNNQQDPRYQDSMGQLLLQYSQAIPGGILMFFPSYSLLNKLTTRWKKTNLWGEIEQYKTIYSEPRNAGKDFDALLEDYKDTITRCSISLVSGDNGKEATNTGAIFLAVYRGKVSEGIDFSNDNARAVLCVGIPFPSVKELQVSLKRKYQDEKSRMNMKLVNGHIWYQLQAFRALNQALGR-----CIRHRQDYGAIMLLDSRHRFNKHTK-SLSKWMRPYIQEFEHSQMCVPMFSDFFQRN 882
BLAST of mRNA_P-lacustris_contig9.15461.1 vs. uniprot
Match: H3GHW5_PHYRM (Helicase ATP-binding domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHW5_PHYRM) HSP 1 Score: 430 bits (1106), Expect = 1.280e-129 Identity = 259/707 (36.63%), Postives = 395/707 (55.87%), Query Frame = 3
Query: 708 EAKPRTRRRTP-RVYFCSRTHSQLNQVVAELRTCRTAFQGTSAVGIGDDGKPFSMTLLAPRTSTCINKEACSDPKGIDDACKRLLKEKACSYY------------------------------------------------SPYNYLVDPGVREIMGINLKDAVVIFDEAHNLEDSAREAASAKLSLRFLANAAGEMHRLGAKSTSLAPAYDLLRSVIVGVQAFLEEED----SCLNIGSYEKAHKVYKGAEALGLMQSRAGVTSESLVHLK---EALRMVVNEEANVDPYDTRDQENGTEGSGQGHGGEVLSSGSLHVTA--SLVKVLSFLLTDGMENVDHYKMVVLRERGPWEPAASRPRGRRARNREGAGSITAMETYLCFWCQSASTCFSEIDKQVHSIVLTSGTLSPLDSFAGELGIEFPHRLEANHVIDVKKQCLVTSVGFF-GGVSLDARFTNQHDLKYQDALGNALLQHARVVPGGMLVFFPSYGLMDKMHDRWKVTGLLQALDAIKGIYLEPRGPGK-IDVVLAEYYDDIKAARESKANNYL-STRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRMRDPRLVGGRAWYNLQAFRAVNQAVGRQGGDMCIRHRHDFGAIVLCDPRYASSTETTASLSKWVRSSVKQCRNVEMSLPQVDAFFRQHEQRDQHHGVAE 2645
+ KP+ +R P R+YFCSRTHSQL QVV EL+ C + S K +L + + C+N + DP +D+ C+ L+ +CSY+ +PYNYL+DP +R+ +GI LKD+++I DEAHN+ED+ R +AS +++ LA A+ + + K + Y+ L ++ G+ +L+ D + L Y++ KV+ G +AL ++ +G+T ++L +K + +R NE AN + ++ + G + G+L + S+V V+ ++ D ++ +D +K+VV++ + W AS R R G E +C WC +A+ FS+I Q S++LTSGTLSP++SFAGELG++FP RLEANHV++++KQ + +V G V L + + NQ D+KYQD++G LLQ+++ VPGG+L+FFPSY L++K+ RWK T L L+ K +Y EPR GK D +L +Y I ++ N + TGA+ LAV RGKVSEGIDFS+D AR + VGIP+PS K+LQV LK++YQD++ + +LV G WY LQAFRA+NQA+GR CIRHR D+GAI+L D R+ + T SLSKW+R +++ + +M +P FF Q + + H V E
Sbjct: 227 DGKPKQKRVVPPRIYFCSRTHSQLAQVVDELKNCPVTYLD-SPEDANAYTKQLQTCVLGSKRNLCVNPKVNKDPSQVDEKCRLALEGSSCSYFRKRKKVNDLRRNVPPVWDIEDLVQLAQKHRECAYFHAREALDHANIVFAPYNYLLDPTIRDAVGITLKDSIIILDEAHNVEDTCRSSASVEVTTDVLA-ASIKAFSIVIKHGNRPKTYNALLKLLNGISRWLQSVDLNANAILQPSGYDEKSKVWDGTDALAMLAEYSGLTKDNLAEMKANVQEVREYENELANSGESAQQPTTQASQDAAANPTGASVLLGALALATAQSIVNVVDYMFRDALKYIDDFKLVVIKSKSTWRENAS---FRSPTKRNGGDE---WELKMCIWCLNAAVAFSDIASQARSVILTSGTLSPMESFAGELGVDFPIRLEANHVVNMRKQVFIGAVMHGPGNVDLQSTYNNQQDIKYQDSVGQLLLQYSQAVPGGILMFFPSYSLLNKLTTRWKKTKLWSQLEQFKAMYSEPRNAGKDFDALLEDYKKTIANCADALDNKREGAATTGAIFLAVYRGKVSEGIDFSNDNARAVLCVGIPFPSVKELQVSLKRKYQDEKSRMNMKLVNGHVWYQLQAFRALNQALGR-----CIRHRQDYGAIMLLDSRHRFNKHTK-SLSKWMRPYMQEFEHSQMCIPMFSDFF-QRNRLELPHSVPE 918
BLAST of mRNA_P-lacustris_contig9.15461.1 vs. uniprot
Match: A0A835ZF85_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF85_9STRA) HSP 1 Score: 441 bits (1134), Expect = 1.540e-129 Identity = 284/746 (38.07%), Postives = 385/746 (51.61%), Query Frame = 3
Query: 726 RRRTPRVYFCSRTHSQLNQVVAELRTCR-------------------TAFQGTSAVGIGDDGKPFSMTLLAPRTSTCINKEACSDPKGIDDACKRLLKEKACS--------------------------------YYS-------------PYNYLVDPGVREIMGINLKDAVVIFDEAHNLEDSAREAASAKLSLRFLANAAGEMHRLGAK---STSLAPAYDLLRSVIVGVQAFLEEEDSCLNIGSYEKAHKVYKGAEALGLMQSRAGVTSESLVHLKEALRMVVNEEANVDPYDTRDQENGTEGSGQGHGGEVLSSGSLHVTASLVKVLSFLLTDGMENVDHYKMVVLRERGPWEPAASRPRGRRARNREGAGSITA------------------------------METYLCFWCQSASTCFSEIDKQVHSIVLTSGTLSPLDSFAGELGIEFPHRLEANHVIDVKKQCLVTSVGFFGGVSLDARFTNQHDLKYQDALGNALLQHARVVPGGMLVFFPSYGLMDKMHDRWKVTGLLQALDAIKGIYLEPRGPGKIDVVLAEYYDDIKAARES-----------------------KANNYLSTRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRMRDPRLVGGRAWYNLQAFRAVNQAVGRQGGDMCIRHRHDFGAIVLCDPRYASSTETTASLSKWVRSSVKQCRNVEMSLPQVDAFF 2603
R++ P + F SRTHSQL QV+ ELR+C T+ G + + G PF MTLL+ R +CI+K A S G+D+ C+ L+E+ C+ Y++ PYNY+VDP +R IM INL D++++FDEAHNL D R AAS +L LA+A EM RL A S + AY LL + + + +L + L +E + + G +ALG++ RAG+T+ES L+ AL+++ E+ D + LS+ +L+V + ++ F+L N HYKM V+RER +R G G M Y C WC SAS CF EI +Q S+VLTSGTLSP+DSFA ELG+ FP +LEA HVIDV++QC V SVG GVSL A F NQ +YQDALG ALL +ARVV GG+LVFFPSYGL+ ++ +RW++TGLL + A K + EPR ++ V+ ++ ++ AR+ K TGA++LAV RGKVSEGIDFSDD AR+ ++VGIPYPS KDL V+ KK YQ+ R RD + G AWY+ +AFRA+NQA+GR CIRHR DFGAI+L DPR+ S LSKWVR+ V++ E + + FF
Sbjct: 274 RQKVPTIIFASRTHSQLGQVIGELRSCSGFLNHVAAGFHINPPTSTSTSAHGGAQLAALLPG-PFRMTLLSSRAHSCIDKRATSLASGVDEGCRTALRERTCARKHRTAALRSQLPQVWDIEEAVEAGGAANGCPYFAAKEALVDAQLVLCPYNYVVDPTLRRIMNINLADSIILFDEAHNLADFCRSAASLRLPESALADAVMEMSRLCASALISGAARAAYVLLHNALSAIGGWLTDAAKELRPYEFETEARTWSGEQALGILGHRAGITAESAEQLESALQLISAEQEQDAAGDMAXXXXXXXXXXDAQQSK-LSAPALNVVSGVITAARFMLGKESTNAAHYKMAVIRER----------------DRSGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMVMYWCLWCLSASVCFEEIAEQARSVVLTSGTLSPMDSFASELGVPFPIQLEAGHVIDVRQQCFVASVGACNGVSLKATFGNQGLAEYQDALGAALLNYARVVRGGVLVFFPSYGLLARVRERWELTGLLAQMQASKAVLEEPRAASDVEAVMRDFNVAVEGARKGGAVXXXXXXXXXXXXSWAERQAGKNGKVQGGGTGAILLAVCRGKVSEGIDFSDDYARLVIVVGIPYPSFKDLLVVAKKAYQNARHARDKAHLSGDAWYSQEAFRALNQAMGR-----CIRHRADFGAIILADPRFQFSG-VQGGLSKWVRAQVQRFDAAEGVVEPLKRFF 995
BLAST of mRNA_P-lacustris_contig9.15461.1 vs. uniprot
Match: G4YGX5_PHYSP (Helicase ATP-binding domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YGX5_PHYSP) HSP 1 Score: 430 bits (1106), Expect = 2.170e-129 Identity = 253/696 (36.35%), Postives = 397/696 (57.04%), Query Frame = 3
Query: 708 EAKPRTRRRTP-RVYFCSRTHSQLNQVVAELRTCRTAFQGTSAVGIGDDGKPFSMTLLAPRTSTCINKEACSDPKGIDDACKRLLKEKACSYY------------------------------------------------SPYNYLVDPGVREIMGINLKDAVVIFDEAHNLEDSAREAASAKLSLRFLANAAGEMHRLGAKSTSLAPAYDLLRSVIVGVQAFLEEEDSCLNI----GSYEKAHKVYKGAEALGLMQSRAGVTSESLVHLK---EALRMVVNEEAN-VDPYDTRDQENGTEGSGQGHGGEVLSSGSLHVTA--SLVKVLSFLLTDGMENVDHYKMVVLRERGPWEPAASRPRGRRARNREGAGSITAMETYLCFWCQSASTCFSEIDKQVHSIVLTSGTLSPLDSFAGELGIEFPHRLEANHVIDVKKQCLVTSVGFF-GGVSLDARFTNQHDLKYQDALGNALLQHARVVPGGMLVFFPSYGLMDKMHDRWKVTGLLQALDAIKGIYLEPRGPGK-IDVVLAEYYDDIKAARESKANNYLSTRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRMRDPRLVGGRAWYNLQAFRAVNQAVGRQGGDMCIRHRHDFGAIVLCDPRYASSTETTASLSKWVRSSVKQCRNVEMSLPQVDAFFRQH 2612
+ KP+ +R P R+YFCSRTHSQL QVV EL+ C ++ S K +L + + C+N++ DP +D+ C+ L+ +CSY+ +PYNYL+DP +RE +GI LKD++++ DEAHN+ED+ R +AS +++ LA A+ + + K + +Y+ L ++ G+ +L+ DS N YE+ KV+ GA+AL ++ +G+T ++L +K + +R NE N + Q ++ + G + G+L + S++ V ++ D ++ +D +K+VV++ W+ +AS R R G E +C WC +A+ FS+I Q S++LTSGTLSP++SFAGELG++FP RLEANHV++++KQ + +V G V L + + NQ D +YQD++G LLQ+++ +PGG+L+FFPSY L++K+ RWK T L ++ K +Y EPR GK D +L +Y D I ++ + ++GA+ LAV RGKVSEGIDFS+D AR + VGIP+PS K+LQV LK++YQD++ + +LV G WY+LQAFRA+NQA+GR CIRHR D+GAI+L D R+ + T SLSKW+R +++ + +M +P FF+++
Sbjct: 252 DGKPKKKRVVPPRIYFCSRTHSQLAQVVDELKNCPVSYLD-SPEDSNTYTKQLQTCVLGSKRNMCVNRKVNRDPSQVDEKCRLALEGASCSYFKKRKKANDLRRHVPPVWDIEDLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPSIREAVGITLKDSIIVLDEAHNVEDTCRSSASVEVTTEVLA-ASIKAFSIVIKHGNRPKSYNALLKLLNGINRWLQSVDSNANAILQPSGYEEKSKVWDGADALAMLAEYSGLTKDNLAEMKANVQEVREYENELGNSAESSQQATQSKASQDAAANPTGASVLLGALALATVQSIMNVADYMFRDNLKFIDDFKLVVIKSTSTWKESAS---FRSPTKRNGGDE---WELKMCIWCLNAAVAFSDIASQARSVILTSGTLSPMESFAGELGVDFPIRLEANHVVNMRKQVFIGAVMHGPGNVDLQSTYNNQQDPRYQDSMGQLLLQYSQAIPGGILMFFPSYSLLNKLTTRWKKTKLWGEIEQFKTVYSEPRNAGKDFDALLEDYKDTITKCT-AEGDEAQDKKSGAIFLAVYRGKVSEGIDFSNDNARAVLCVGIPFPSVKELQVSLKRKYQDEKSRMNMKLVNGHVWYHLQAFRALNQALGR-----CIRHRQDYGAIMLLDSRHRFNKHTK-SLSKWMRPYIQEFEHGQMCVPMFGDFFQRN 932
BLAST of mRNA_P-lacustris_contig9.15461.1 vs. uniprot
Match: D0NXC2_PHYIT (Helicase ATP-binding domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=D0NXC2_PHYIT) HSP 1 Score: 428 bits (1100), Expect = 6.770e-129 Identity = 250/685 (36.50%), Postives = 391/685 (57.08%), Query Frame = 3
Query: 738 PRVYFCSRTHSQLNQVVAELRTCRTAFQGTSAVGIGDDGKPFSMTLLAPRTSTCINKEACSDPKGIDDACKRLLKEKACSYY------------------------------------------------SPYNYLVDPGVREIMGINLKDAVVIFDEAHNLEDSAREAASAKLSLRFLANAAGEMHRLGAKSTSLAPAYDLLRSVIVGVQAFLEEEDSCLNI----GSYEKAHKVYKGAEALGLMQSRAGVTSESLVHLKEALRMVVNEEANVDPYDTRDQENGTEGSGQGH----GGEVLSSG-SLHVTASLVKVLSFLLTDGMENVDHYKMVVLRERGPWEPAASRPRGRRARNREGAGSITAMETYLCFWCQSASTCFSEIDKQVHSIVLTSGTLSPLDSFAGELGIEFPHRLEANHVIDVKKQCLVTSVGFF-GGVSLDARFTNQHDLKYQDALGNALLQHARVVPGGMLVFFPSYGLMDKMHDRWKVTGLLQALDAIKGIYLEPRGPGK-IDVVLAEYYDDIKAARESKANNYLSTRTGAMMLAVARGKVSEGIDFSDDAARMCVIVGIPYPSSKDLQVMLKKEYQDQRRMRDPRLVGGRAWYNLQAFRAVNQAVGRQGGDMCIRHRHDFGAIVLCDPRYASSTETTASLSKWVRSSVKQCRNVEMSLPQVDAFFRQHE 2615
P+++FCSRTHSQL QVV EL+ C ++ S K +L + + C+N++ DP +D+ C+ L+ +CS++ +PYNYL+DP +R +GI LKDA+++ DEAHN+ED+ R +AS +++ LA A+ + + K + Y+ L ++ G+ +L+ DS N YE+ KV+ GA+AL ++ +G+T ++L +KE ++ V E + Q+ T+ + G VL +L S++ V+ ++ D ++ ++ +K+VV++ + W+ AS R R G E +C WC +A+ FS+I Q S++LTSGTLSP++SFAGELG++FP RLEANHV++++KQ + +V G V L + + NQ D +YQD++G LLQ+++ +PGG+L+FFPSY L++K+ RWK T L ++ K IY EPR GK D +L +Y + I +++ N +TGA+ LAV RGKVSEGIDFS+D AR + VGIP+PS K+LQV LK++YQD++ + +LV G WYNLQAFRA+NQA+GR CIRHR D+GAI+L D R+ + T SLSKW+R +++ + +M +P FF++++
Sbjct: 230 PQIFFCSRTHSQLAQVVDELKNCPVSYLD-SPEDSNTYTKQLQTCVLGSKRNMCVNRKVNRDPSQVDEKCRLALEGSSCSFFRKRKKTNDLKRSVPPVWDIEDLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPTIRGAVGITLKDAIIVLDEAHNVEDTCRSSASVEVTTDALA-ASIKAFTIVIKHGNRPKTYNALLKLLNGINRWLQSVDSNANAILQPSGYEEKSKVWDGADALAMLAEYSGLTKDNLEEMKENVQEVREYENGLGNSAESSQQPPTQAAQDAAANPTGASVLLGALALATVESIMNVVDYMFRDRLKFIEDFKLVVIKSKSTWKENAS---FRSPTKRNGGDE---WELKMCIWCLNAAVAFSDIASQARSVILTSGTLSPMESFAGELGVDFPIRLEANHVVNMRKQVFIGAVMHGPGNVDLQSTYNNQQDPRYQDSMGQLLLQYSQAIPGGILMFFPSYSLLNKLTTRWKKTKLWGEIEQFKAIYSEPRNAGKDFDRLLEDYKETITCSKDGDDGN----KTGAVFLAVYRGKVSEGIDFSNDNARAVLCVGIPFPSVKELQVSLKRKYQDEKSRMNMKLVNGHIWYNLQAFRALNQALGR-----CIRHRQDYGAIMLLDSRHRFNKHTK-SLSKWMRPYIQEFEHSQMCVPMFSDFFQRNK 896 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig9.15461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig9.15461.1 >prot_P-lacustris_contig9.15461.1 ID=prot_P-lacustris_contig9.15461.1|Name=mRNA_P-lacustris_contig9.15461.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=850bp MSKTSTPNVKLNKQNNEAKPRTRRRTPRVYFCSRTHSQLNQVVAELRTCRback to top mRNA from alignment at P-lacustris_contig9:226280..235509- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig9.15461.1 ID=mRNA_P-lacustris_contig9.15461.1|Name=mRNA_P-lacustris_contig9.15461.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=9230bp|location=Sequence derived from alignment at P-lacustris_contig9:226280..235509- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig9:226280..235509- >mRNA_P-lacustris_contig9.15461.1 ID=mRNA_P-lacustris_contig9.15461.1|Name=mRNA_P-lacustris_contig9.15461.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=5100bp|location=Sequence derived from alignment at P-lacustris_contig9:226280..235509- (Pleurocladia lacustris SAG_25_93)back to top |