mRNA_P-lacustris_contig9.15458.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig9.15458.1
Unique NamemRNA_P-lacustris_contig9.15458.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig9.15458.1 vs. uniprot
Match: A0A6H5JBS2_9PHAE (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBS2_9PHAE)

HSP 1 Score: 820 bits (2118), Expect = 7.920e-283
Identity = 550/828 (66.43%), Postives = 586/828 (70.77%), Query Frame = 3 
Query:  204 VSSCIMPRQATRPVDKLRGPVRKAALAGLDRTSLEDDPLLTGLAELQTKQALKVLDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPAPG-TMGSAQRLIERLSPPVSQAVQGVFDPVLDRCVYEDRALMELLAKVPEEQALAALKKYRATVQRRGRDAIENRCGYLIGFLKQYQDGVAVVGVPGNAMHHSRNAPALSSNGDGQQSTNGSSGQSSSAXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXGYGGLGGG------STSGVRPITYLQAPVRKELEKLFESGRDKTVLEDVGLIKQLSRLGEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPWEGGGNDDGSGVRSSIAPGPPTSLLPPGSSRARGXXXXPGTVDIERSDPNSQSNVPSSPQPXXXXXXXXXXXXXXXXXXXXQ------------------AAAHGPRELGGFTSAPAQSQLLXXXXXXX-----------AHSAAPLNSISATPSTSPLASPLVGGDGHFFAGMIGRNGVGGDSAHNRYDPSHSLLYLNDSVAHQQ------------PLRHVSPHESLFGGSHLSANYHGGQGQTLVGPGLLGGDFLSTGGGGDRVGASPPLGAAHAGGPXXXXXXXXXXXXXXXSCSNG--TLGNTVPPSPGSGSGLGSTSGFGSCFLPGAGSGVESPLSSDAGNDTASTLTYXXXXXXXXXXXAGSLSVAGSSPCNGSTDGPSSSSPASGEGRENNDSLNGNVNGVVDVLTRLNLSKYVPILAEAEVDLDALRLFGEDDLKDLGFPKGPRIKLLHEVQNLNFPQRA 2537
            V+S  MPRQATRPVDKLRGPVRKAALAGLDRTSL+DDPLLTGL+ELQTKQALKVLDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPAPG T GSAQRL+ERLSPPVSQAVQGVFDPVLDRCVYEDRALMELLAKVPEEQALAALKKYRATVQRRGRDAIENRCGYLIGFLKQYQDGVA+VGVPGNA+H +RNA   SSNG GQ  TNGS+GQSSS+                                    G G           ++SGVRPITYLQAPVRKELEKLFESG+DKTVLEDVGLIKQLSRLGEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPWEGGGN+DG GV +  AP        PG++RAR XXXX                       XXXXXXXXXXXXXXXXXXXX                   A +  PRELGGF +APAQ+Q  XXXXXXX              AAPL SISAT S    ASP +GGDG F A +   +G  G  +  +Y+PS+ LLY+N S  HQ             PLRHVSPHESLFGG HLSAN++GGQ QTLVGPGLLGGDFL++GGG +  G             XXXXXXXXXXX    SCSN    LGN +P SPGSGSGL               SGVESPLSSDAGNDT  TL             AGSLSVAGSS CNGSTD  SS SP S +GREN DS NGN   VVDVL RLNLSKYV +LAEAEVDLDALRLFGEDDLKDLGFPKGPR+KLLHEVQNLNFP RA
Sbjct:   24 VASYTMPRQATRPVDKLRGPVRKAALAGLDRTSLQDDPLLTGLSELQTKQALKVLDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPAPGATAGSAQRLLERLSPPVSQAVQGVFDPVLDRCVYEDRALMELLAKVPEEQALAALKKYRATVQRRGRDAIENRCGYLIGFLKQYQDGVAIVGVPGNAVHQARNALESSSNGYGQHLTNGSAGQSSSSATNGHNPNANGARNGAMNGAG---GGPSATATSSSQGTGAXXXXXXXXXXNSSGVRPITYLQAPVRKELEKLFESGKDKTVLEDVGLIKQLSRLGEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPWEGGGNEDGPGVNAPTAP--------PGTNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXPATXXXXXXXXXXVAVSAPPRELGGFANAPAQTQXXXXXXXXXXXXXXXXXXXVVRPAAPLTSISATRS----ASPPLGGDGRFLASLR-HDGASGRPSQGQYEPSNGLLYMNGSGTHQXXXXXXXXXXXXXPLRHVSPHESLFGGGHLSANHNGGQPQTLVGPGLLGGDFLASGGGANWTGXXXXXXXXXXXXXXXXXXXXXXXXENFGSCSNSRSNLGNAIPQSPGSGSGLXXXXXXXXXXXXVPDSGVESPLSSDAGNDTPGTLPSSTTTTATVS--AGSLSVAGSSSCNGSTDWASSGSPESVQGRENTDSSNGN--SVVDVLARLNLSKYVAVLAEAEVDLDALRLFGEDDLKDLGFPKGPRVKLLHEVQNLNFPSRA 831
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BLAST of mRNA_P-lacustris_contig9.15458.1 vs. uniprot
Match: A0A813JZV9_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JZV9_POLGL)

HSP 1 Score: 64.3 bits (155), Expect = 1.500e-8
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 3 
Query: 2364 VLTRLNLSKYVPILAEAEVDLDALRLFGEDDLKDLGFPKGPRIKLLHEVQNLNFP 2528
            ++ ++ L +++P     EVDLDAL LF E DL+DLG PKGPR+KLL  VQ + FP
Sbjct:    4 LMQQIGLERFIPAFQAEEVDLDALSLFEEKDLQDLGLPKGPRVKLLRAVQGI-FP 57
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BLAST of mRNA_P-lacustris_contig9.15458.1 vs. uniprot
Match: A0A813KCP2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KCP2_POLGL)

HSP 1 Score: 63.2 bits (152), Expect = 9.260e-7
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 3 
Query: 2376 LNLSKYVPILAEAEVDLDALRLFGEDDLKDLGFPKGPRIKLLHEVQNLNFP 2528
            + L +++P     EVDLDAL LF E DL+DLG PKGPR+KLL  VQ + FP
Sbjct:    1 IGLERFIPAFQAEEVDLDALSLFEEKDLQDLGLPKGPRVKLLRAVQGI-FP 50
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BLAST of mRNA_P-lacustris_contig9.15458.1 vs. uniprot
Match: A0A8D0HGH4_SPHPU (SAM domain-containing protein n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0HGH4_SPHPU)

HSP 1 Score: 56.6 bits (135), Expect = 3.040e-6
Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 3 
Query: 2346 VNGVVDVLTRLNLSKYVPILAEAEVDLDALRLFGEDDLKDLGFPKGPRIKLLHEVQN 2516
            ++ V D+L +L LS+Y  +  + +VD  AL L  + +LK++G P GPR+K+LH ++N
Sbjct:   24 ISDVKDILKKLELSEYYSVFEKEQVDRQALALCTDKELKEMGIPLGPRVKILHYIRN 80
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BLAST of mRNA_P-lacustris_contig9.15458.1 vs. uniprot
Match: UPI0018A2217A (phospholipase DDHD2 isoform X5 n=2 Tax=Chelonioidea TaxID=27791 RepID=UPI0018A2217A)

HSP 1 Score: 62.0 bits (149), Expect = 4.980e-6
Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 3 
Query: 2340 GNVNGVVDVLTRLNLSKYVPILAEAEVDLDALRLFGEDDLKDLGFPKGPRIKLLHEVQNLNFPQRA 2537
            G+V GV ++L +L LS+Y  +  +  +D  AL L  E DLKD+G P GPR+K+LH V+     Q A
Sbjct:  381 GDVGGVKEILKKLELSEYCSVFEKERLDTQALALCTEKDLKDMGIPLGPRMKILHYVRTKEEKQHA 446
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BLAST of mRNA_P-lacustris_contig9.15458.1 vs. uniprot
Match: A0A7S2FJN9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FJN9_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.260e-5
Identity = 25/54 (46.30%), Postives = 40/54 (74.07%), Query Frame = 3 
Query: 2355 VVDVLTRLNLSKYVPILAEAEVDLDALRLFGEDDLKDLGFPKGPRIKLLHEVQN 2516
            V  +L RLNLS+++ +L E  +DLDAL +  +DDLK++G PKG R+KL+  +++
Sbjct:  137 VASLLVRLNLSRHIEVLQEEGLDLDALAMCSDDDLKEIGLPKGARLKLVKWIRD 190
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BLAST of mRNA_P-lacustris_contig9.15458.1 vs. uniprot
Match: UPI0018E8C551 (phospholipase DDHD2 isoform X3 n=2 Tax=Dermochelys coriacea TaxID=27794 RepID=UPI0018E8C551)

HSP 1 Score: 60.8 bits (146), Expect = 1.320e-5
Identity = 28/66 (42.42%), Postives = 41/66 (62.12%), Query Frame = 3 
Query: 2340 GNVNGVVDVLTRLNLSKYVPILAEAEVDLDALRLFGEDDLKDLGFPKGPRIKLLHEVQNLNFPQRA 2537
            G+V GV + L +L LS+Y  +  +  +D+ AL L  E DLKD+G P GPR+K+LH ++     Q A
Sbjct:  351 GDVGGVKETLKKLELSEYCSVFEKERLDMQALALCTEKDLKDMGIPLGPRMKILHYIRTKEETQDA 416
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BLAST of mRNA_P-lacustris_contig9.15458.1 vs. uniprot
Match: H9G5V9_ANOCA (Uncharacterized protein n=4 Tax=Iguania TaxID=8511 RepID=H9G5V9_ANOCA)

HSP 1 Score: 60.8 bits (146), Expect = 1.350e-5
Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 3 
Query: 2361 DVLTRLNLSKYVPILAEAEVDLDALRLFGEDDLKDLGFPKGPRIKLLHEVQNLN 2522
            D+LT L LS+Y  +  + EVD  AL L  E +LKD+G P GPR+K+LH ++N N
Sbjct:  386 DILTELELSEYCSVFEKEEVDRQALALCTEKELKDMGIPLGPRMKILHYLRNKN 439
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BLAST of mRNA_P-lacustris_contig9.15458.1 vs. uniprot
Match: A0A670JC30_PODMU (DDHD domain containing 2 n=7 Tax=Lacertinae TaxID=162266 RepID=A0A670JC30_PODMU)

HSP 1 Score: 60.5 bits (145), Expect = 1.790e-5
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3 
Query: 2346 VNGVVDVLTRLNLSKYVPILAEAEVDLDALRLFGEDDLKDLGFPKGPRIKLLHEVQNLNFPQRA 2537
            +  V D+LT L LS+Y  +  +  VD  AL L  E +LKD+G P GPR+K+LH ++N +  Q +
Sbjct:  400 IGSVTDILTELELSEYCSVFEKENVDRQALALCTEKELKDMGIPLGPRMKILHYLRNKSNNQNS 463
[Close]
BLAST of mRNA_P-lacustris_contig9.15458.1 vs. uniprot
Match: A0A6J0SZH9_9SAUR (phospholipase DDHD2 isoform X1 n=2 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0SZH9_9SAUR)

HSP 1 Score: 59.3 bits (142), Expect = 4.020e-5
Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 3 
Query: 2355 VVDVLTRLNLSKYVPILAEAEVDLDALRLFGEDDLKDLGFPKGPRIKLLHEVQNLNFPQRA*DDD*AAS 2561
            V DVLT L LS+Y  +  + EVD  AL L  E +L+D+G P GPR+K+LH +++ +  Q + +   +AS
Sbjct:  387 VKDVLTELELSEYCSVFEKEEVDSQALALCTEKELRDMGIPLGPRMKILHYIKSKSNSQYSKEQTPSAS 455
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig9.15458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JBS2_9PHAE7.920e-28366.43SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A813JZV9_POLGL1.500e-852.73Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A813KCP2_POLGL9.260e-756.86Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A8D0HGH4_SPHPU3.040e-640.35SAM domain-containing protein n=1 Tax=Sphenodon pu... [more]
UPI0018A2217A4.980e-643.94phospholipase DDHD2 isoform X5 n=2 Tax=Chelonioide... [more]
A0A7S2FJN9_9STRA1.260e-546.30Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI0018E8C5511.320e-542.42phospholipase DDHD2 isoform X3 n=2 Tax=Dermochelys... [more]
H9G5V9_ANOCA1.350e-550.00Uncharacterized protein n=4 Tax=Iguania TaxID=8511... [more]
A0A670JC30_PODMU1.790e-542.19DDHD domain containing 2 n=7 Tax=Lacertinae TaxID=... [more]
A0A6J0SZH9_9SAUR4.020e-542.03phospholipase DDHD2 isoform X1 n=2 Tax=Pogona vitt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig9contigP-lacustris_contig9:205373..210635 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score60.1
Seed ortholog evalue5.4e-06
Seed eggNOG ortholog8469.XP_007053517.1
Preferred nameDDHD2
KEGG koko:K16545
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003008,GO:0003674,GO:0003824,GO:0004620,GO:0004806,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005793,GO:0005794,GO:0005798,GO:0005801,GO:0005815,GO:0005829,GO:0005856,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006726,GO:0006807,GO:0006810,GO:0006888,GO:0006996,GO:0007276,GO:0007283,GO:0007610,GO:0007611,GO:0007612,GO:0007626,GO:0007632,GO:0008150,GO:0008152,GO:0008306,GO:0008542,GO:0009056,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009628,GO:0009987,GO:0010638,GO:0010821,GO:0010822,GO:0012505,GO:0015630,GO:0016020,GO:0016042,GO:0016043,GO:0016063,GO:0016192,GO:0016298,GO:0016787,GO:0016788,GO:0019433,GO:0019538,GO:0019953,GO:0022414,GO:0022603,GO:0030134,GO:0030135,GO:0031410,GO:0031982,GO:0032501,GO:0032504,GO:0033043,GO:0034389,GO:0042440,GO:0042441,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043324,GO:0043473,GO:0043474,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046148,GO:0046154,GO:0046461,GO:0046464,GO:0046486,GO:0046503,GO:0046907,GO:0048066,GO:0048069,GO:0048193,GO:0048232,GO:0048518,GO:0048522,GO:0048609,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0052689,GO:0065007,GO:0071704,GO:0071840,GO:0090140,GO:0090141,GO:0097708,GO:1901564,GO:1901566,GO:1901575,GO:1901576
EggNOG free text desc.DDHD
EggNOG OGs38FWE@33154,3BDJ7@33208,3CUIS@33213,4866N@7711,48Z2X@7742,4CE1J@8459,KOG2308@1,KOG2308@2759
COG Functional cat.IU
Best tax levelTestudines
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons4
Model size3247
Cds size2322
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig9.15458.1prot_P-lacustris_contig9.15458.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig9 205591..209928 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817324.4776015-UTR-P-lacustris_contig9:205372..2055901622817324.4776015-UTR-P-lacustris_contig9:205372..205590Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig9 205373..205590 +
1693494975.5534842-UTR-P-lacustris_contig9:205372..2055901693494975.5534842-UTR-P-lacustris_contig9:205372..205590Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig9 205373..205590 +
1622817324.53624-UTR-P-lacustris_contig9:209928..2106351622817324.53624-UTR-P-lacustris_contig9:209928..210635Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig9 209929..210635 +
1693494975.6162276-UTR-P-lacustris_contig9:209928..2106351693494975.6162276-UTR-P-lacustris_contig9:209928..210635Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig9 209929..210635 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817324.4884894-CDS-P-lacustris_contig9:205590..2057251622817324.4884894-CDS-P-lacustris_contig9:205590..205725Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig9 205591..205725 +
1693494975.5755687-CDS-P-lacustris_contig9:205590..2057251693494975.5755687-CDS-P-lacustris_contig9:205590..205725Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig9 205591..205725 +
1622817324.5005684-CDS-P-lacustris_contig9:206807..2070771622817324.5005684-CDS-P-lacustris_contig9:206807..207077Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig9 206808..207077 +
1693494975.5855265-CDS-P-lacustris_contig9:206807..2070771693494975.5855265-CDS-P-lacustris_contig9:206807..207077Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig9 206808..207077 +
1622817324.514386-CDS-P-lacustris_contig9:207539..2093661622817324.514386-CDS-P-lacustris_contig9:207539..209366Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig9 207540..209366 +
1693494975.595649-CDS-P-lacustris_contig9:207539..2093661693494975.595649-CDS-P-lacustris_contig9:207539..209366Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig9 207540..209366 +
1622817324.5258403-CDS-P-lacustris_contig9:209838..2099281622817324.5258403-CDS-P-lacustris_contig9:209838..209928Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig9 209839..209928 +
1693494975.6065228-CDS-P-lacustris_contig9:209838..2099281693494975.6065228-CDS-P-lacustris_contig9:209838..209928Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig9 209839..209928 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig9.15458.1

>prot_P-lacustris_contig9.15458.1 ID=prot_P-lacustris_contig9.15458.1|Name=mRNA_P-lacustris_contig9.15458.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=774bp
MPRQATRPVDKLRGPVRKAALAGLDRTSLEDDPLLTGLAELQTKQALKVL
DTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPAPGTMGSAQRLIERLSP
PVSQAVQGVFDPVLDRCVYEDRALMELLAKVPEEQALAALKKYRATVQRR
GRDAIENRCGYLIGFLKQYQDGVAVVGVPGNAMHHSRNAPALSSNGDGQQ
STNGSSGQSSSAANGNNPNATSSRNGTMTGAGSVQSATSTSSSQGTAAGY
GGLGGGSTSGVRPITYLQAPVRKELEKLFESGRDKTVLEDVGLIKQLSRL
GEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPWEG
GGNDDGSGVRSSIAPGPPTSLLPPGSSRARGRGRGPGTVDIERSDPNSQS
NVPSSPQPPPQPQAGPPPQPPVTPPLAPQAAAHGPRELGGFTSAPAQSQL
LPSPPPPVAHSAAPLNSISATPSTSPLASPLVGGDGHFFAGMIGRNGVGG
DSAHNRYDPSHSLLYLNDSVAHQQPLRHVSPHESLFGGSHLSANYHGGQG
QTLVGPGLLGGDFLSTGGGGDRVGASPPLGAAHAGGPGSLFGSGLLAGDN
INSCSNGTLGNTVPPSPGSGSGLGSTSGFGSCFLPGAGSGVESPLSSDAG
NDTASTLTYSTTYSATAVASAGSLSVAGSSPCNGSTDGPSSSSPASGEGR
ENNDSLNGNVNGVVDVLTRLNLSKYVPILAEAEVDLDALRLFGEDDLKDL
GFPKGPRIKLLHEVQNLNFPQRA*
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mRNA from alignment at P-lacustris_contig9:205373..210635+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig9.15458.1 ID=mRNA_P-lacustris_contig9.15458.1|Name=mRNA_P-lacustris_contig9.15458.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=5263bp|location=Sequence derived from alignment at P-lacustris_contig9:205373..210635+ (Pleurocladia lacustris SAG_25_93)
GACTCTAGTGGCTATCGAAATACCACCAGTAGTCGTCGTGTGTTGGTGCA
CAGATATACCGGCAATTACTTTTGATCTGCAAGACAAGGTCAGCTCTCTT
TGGTTGGTGGTGTTGTCTGTGAACGAAGGTTTGGCGCCGAAACGAAATCA
TCCGCTTGTACCGGAACGGATTGCCCGTTGCCCTCCGAACCAATCGATTT
GCAGTTTCCAGCTGCATCATGCCTCGTCAAGCCACCCGGCCGGTGGATAA
GCTACGAGGACCTGTGAGGAAGGCTGCTCTGGCAGGATTGGATCGCACCT
CTCTTGAGGACGATCCTCTTTTGACAGGGCTAGCGGAGCTGCAAACGAAA
CAGGTGCGCTTCTGGTCATATCGGATTTCTGGCTAGCTGGATCTAGCGCC
GAGAGCCTGGTGTTTGTGTCGTTGGTGTTCTTAGATCAGGATTTCGGGCA
GAGATTTCGCTGAACAGATTTGACTGCCCACATTTTTCAAACTGCTGTTG
TTGTCTTTTTGGCCTAGCCGCCGTGGACCTTTGGCGTGGCCCAGATGTGG
GTGGGCAGGAGAGCACCGATAGGTGCCGCGAGGACATCCTAGACATGCAC
CGGACTGCCGGTGATCCGCTCGCGTGTGTGTGCAGCACGAACGTTGCACG
CACCTCAAGTTGGTTATCCGGGGAGAGCGTGCTGTATTAATATTTGTTCG
TAAAGGCTCGACTCGTTGGATGCGGGGGAATTGAAAACACACAGCCAGTT
GGACAATCAGGTGCCAATGCCAAAGGTGCCGATCCGTTCTTTTAAAACTT
GAGTTTGGCGCACCGATAGAGGTCGTTTACATCGGGCTATCACGTACGTG
AATTGACCCGAAATAGTTACATCCGTGCCCGTTGTTGATTCTTGTGTTGC
CAGAAGGTCGAATTACAATGTCGAATTACAATATATTGATTTTTCGAAAA
AGATACGCCGAAACAAGCATAAACTCTACGCTGCACCATCGCCACCTCAC
TTTTTGCGCACTTCTATGTGTATAGTTTGAAGCAACAAGTTGAATAAAAG
CTGTCAAAGAAAAGTTCCTTGGCCGTATCTGCGGCTGCGATTATTAAGAT
GCTCGGGTTGGTAATCAAACCGTGTGATGAATCACCCGAGTAAAACCGAC
ACCGATATTCAAGTCTCCCCTCTGCTGTTTGATCGAGGCATCATTTAACC
GCTGTCTATTGCCCTCATCCTGGCAAGGAGTGCGTCCAAACGGCAAAAGT
AAAGTAATCGTCGACCGTTTCCCGCTTCCTAAGCTGCATGTAGAGGAGTA
TTGATTGATTGCATTTCAACGACAGCGCACAAAGCCTCGACGCCCTATGC
ACGACCAGACCTAACATAAATACGGCAAACCCGTAGAACATTGAGGGAAC
ACACCCCACCGTGTCTGTCTGTTCTCTGTCCGAAGGCCCTCAAAGTATTG
GATACATACTGCGCGAACGTGCAACGGCAAGGGAGTGGACGGATCCAGAA
TAAGGCTGCTTACCTCATGTCGCTCATTCAATCGTACAAGCTTGGCCCTG
CGCCGGGAACCATGGGGTCGGCTCAGAGGCTCATTGAGCGGCTGAGCCCT
CCCGTGTCCCAAGCGGTGCAGGGGGTCTTCGATCCGGTTCTCGACCGTTG
TGTATACGAAGACCGCGCGTTGATGGAGCTCTTGGCCAAGGTGCCTGAGG
AGCAGGTAAAAACGTAAAAACGGGAGACTGCTGGCACTTGTCGCGACGAT
CAAGCTGGGTAGGCGTGGTTGCCATATCTGCTGCAGGCGGGGGCAGTTAT
GGTTGTGTAGTAGATAGTCATCTCCAGAAATTTCAACACCGAATGAGCAC
GTAAAGATCGATATGGCAGGGTCGCTACGCGAGGGTTTGCCCTGCGTGCT
TTCGGAAATGATAATGGACCTTTTTCTGTACGGATACCCCCACCGAAGCG
ACTTCGTTTGTAGCTCTAATCGAAACGACCTGTGTTCCCCCTCCGATGCC
CAGTACGGACAGGTATCGTGTTTTCGTACGAAGCGCACATGTTTGAACTC
GCAATTGTCAGTGTCTGACGGCATGCAACACGCACATATGGTTCTTTTTC
GAAATAGCGATCATATCATAGCGCTGACCTATCGTGTATTCTTATTGTTG
CCGAATCTCTTGTGCAGGCGCTGGCAGCGCTTAAAAAGTACCGCGCGACC
GTTCAGCGCCGCGGACGAGACGCGATCGAAAACCGTTGTGGGTACTTAAT
AGGCTTCCTCAAGCAGTATCAAGACGGGGTGGCTGTCGTCGGCGTGCCTG
GCAACGCGATGCACCATTCCCGCAATGCTCCCGCGTTGAGCTCGAATGGC
GATGGCCAGCAATCTACGAACGGTTCGTCAGGCCAATCTTCCTCGGCGGC
AAACGGGAACAACCCGAATGCGACCAGCTCGAGGAACGGTACGATGACCG
GCGCGGGAAGCGTTCAGTCCGCGACGTCGACGTCTTCCTCGCAAGGGACG
GCGGCCGGGTACGGGGGGCTCGGGGGCGGCAGTACGTCGGGAGTCCGACC
GATCACATACCTTCAGGCTCCCGTTCGGAAGGAGCTCGAGAAGTTGTTCG
AGTCAGGTAGGGACAAGACTGTCCTCGAAGACGTTGGGCTGATCAAGCAG
CTGTCGAGGCTAGGCGAGGAACAGGCCCTAGCCGCACTCAAGAACTACAA
GGAGGCTTCCAAGCACCGGCGAGACATCCACAACAAATCCGCCTACTTGA
TGGGAATTCTGCGTGGCTACATCGAGGGCACTACCCCTATCTCCAAAGCC
CCCTGGGAAGGAGGGGGGAACGATGATGGTTCGGGCGTTCGTTCATCCAT
CGCGCCCGGTCCTCCCACGTCGTTGCTCCCCCCCGGAAGCAGTCGGGCGC
GAGGGCGCGGTCGGGGTCCCGGGACGGTCGATATCGAACGTAGCGACCCA
AATTCGCAATCGAACGTGCCGTCGTCACCGCAGCCGCCACCTCAACCGCA
GGCGGGGCCTCCGCCCCAACCTCCGGTGACGCCTCCTCTTGCGCCCCAGG
CCGCTGCTCACGGGCCGCGGGAGCTGGGCGGATTCACGAGTGCTCCTGCG
CAGTCTCAACTACTACCGTCGCCACCGCCTCCCGTTGCGCATTCGGCCGC
ACCGTTGAATTCGATATCCGCGACACCATCGACCTCTCCGCTAGCGTCGC
CTCTCGTCGGAGGCGACGGGCATTTCTTTGCAGGCATGATAGGGCGCAAC
GGTGTGGGCGGAGACTCCGCTCACAATCGGTACGACCCGTCGCACAGCCT
CCTCTACCTGAACGACAGCGTTGCGCACCAGCAACCCCTACGGCACGTTT
CTCCTCACGAGTCGCTGTTTGGCGGCAGTCATCTGTCGGCGAACTACCAT
GGAGGGCAGGGGCAGACGTTGGTTGGGCCAGGTTTACTCGGGGGCGATTT
TCTGTCGACTGGTGGGGGTGGCGATCGGGTTGGTGCTTCACCCCCACTTG
GCGCTGCTCACGCGGGCGGGCCTGGCTCACTTTTTGGGTCAGGATTACTT
GCGGGAGACAACATCAACAGCTGCAGCAACGGCACCCTTGGAAACACTGT
TCCACCTTCCCCCGGCTCGGGCTCGGGTCTTGGCTCCACGTCGGGGTTTG
GCTCGTGCTTCTTGCCCGGCGCTGGCTCGGGAGTGGAGTCTCCTCTGAGC
AGCGATGCGGGGAATGATACGGCTAGTACGCTTACGTATTCCACGACGTA
TTCCGCGACAGCGGTGGCGTCGGCGGGATCCTTGTCGGTAGCAGGATCGT
CGCCTTGTAACGGTTCGACGGACGGTCCTTCTAGTAGTTCCCCGGCATCA
GGAGAGGGCAGGGAGAACAACGATTCGTTGAACGGCAACGTCAACGGTGT
GGTGGATGTGCTGACACGGCTCAATTTGAGCAAGTACGTGCCGATACTAG
CGGAGGCGGAGGTCGATCTGGACGCGCTGCGACTTTTCGGCGAGGTACGT
ACATGTATGTCCTTTGTAGTTTCGCCCTTGTATGCAACCGGCAGGAATTC
GTGCACAAGAGTGATGTTTTATGTGTATGGTATTCTCTGGACCCCGACAC
GATGTGCAAACGCAGTCAGTCGCACGGCACGAAAGCGTGTGCTGGCCGAA
ACGCCCTGGGTGATATCGAATGTGCCCGATCCACGGGGTAAATATCGGCT
TCGTTCGGCCGCAAGTACCTACATGATTCCCTTCGTGCATATCGGATGTC
GGGTTACTCCCTCAAACGGTCATGTTTTCTATCGCTCACGACTCCCTTGC
AGTAAGGTCCGAATAGACAAACAAGCAGAGCAATTGTGTGGCACGGCATT
CGACCCCTTCGGCCATCTGGGGATTGTCAGGTTCTTACTTTTTGCTTCCG
CCTGTATGCGCTCTTGCTCGGCCTCGGGCCTCGGTTGCACGGCTGTACAC
ATCATTCTTCTTTCAGGACGACTTGAAGGACCTAGGGTTTCCAAAAGGGC
CGCGCATCAAGCTTCTTCACGAGGTGCAAAACCTCAACTTCCCGCAAAGG
GCGTGAGATGATGACTGAGCGGCTTCCTAGCCTTGGCAGTCAAGATTCCG
ATTTGTTTTACTCCTGTCGTCAAGACGCATCGCCTTCGCGCTGATGAGAT
GGGCCGATGTTGTGTTTGCCGGCGGGTAGGGGAAATGGCTTCCCTCGGGT
TGCATCCGTATGAAACCTTCTGCATCGTCCGCGTGGAGAGATGGTGTCCC
TCCATTTTCTCTCGGGCGGGTTTGGTGTACGATCAACGTTTTTTTCTCCC
TGCTCGTTGCCGTTACAGGCAAGCAAGTGCGAAGTGCCTCAATATGACGG
CAAGACTCGTCTGATCTCGGAGCAAAACATCAGCTTCACTAGACTGAAGT
GGCACTACCGCACATGTGTTTTATTGTTGGTTGCTTCCAGGACGTCGGGC
AATTGTACAGGCGTATCCCAAGTTTGCCGGCTCCTTCTCCTTTCTGATCA
ACAAAGGTGTCGCAGAGAGCTCACAATTGTTTTTACGTGCTTACTTTCCT
TGATTACGTGCGATAAGGTGCTGGTGTGTATTCTAAAAACTGTGTCGAGG
GTTTTCGTTGCACGTGATCGAAGGACGAAATGTTTGCGCCCACCGTCGAC
GTTAATTGGGTTGTCTGGTATCAATCGCAAACAAAGTTTCAAACTAAATG
CTGCTGTTGCAACGAACAACTCGTGGTGTGCTTTTTGTTAACGTTTCTAC
GAACGAACGGTGG
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Coding sequence (CDS) from alignment at P-lacustris_contig9:205373..210635+

>mRNA_P-lacustris_contig9.15458.1 ID=mRNA_P-lacustris_contig9.15458.1|Name=mRNA_P-lacustris_contig9.15458.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=4644bp|location=Sequence derived from alignment at P-lacustris_contig9:205373..210635+ (Pleurocladia lacustris SAG_25_93)
ATGCCTCGTCAAGCCACCCGGCCGGTGGATAAGCTACGAGGACCTGTGAG
GAAGGCTGCTCTGGCAGGATTGGATCGCACCTCTCTTGAGGACGATCCTC
TTTTGACAGGGCTAGCGGAGCTGCAAACGAAACAGATGCCTCGTCAAGCC
ACCCGGCCGGTGGATAAGCTACGAGGACCTGTGAGGAAGGCTGCTCTGGC
AGGATTGGATCGCACCTCTCTTGAGGACGATCCTCTTTTGACAGGGCTAG
CGGAGCTGCAAACGAAACAGGCCCTCAAAGTATTGGATACATACTGCGCG
AACGTGCAACGGCAAGGGAGTGGACGGATCCAGAATAAGGCTGCTTACCT
CATGTCGCTCATTCAATCGTACAAGCTTGGCCCTGCGCCGGGAACCATGG
GGTCGGCTCAGAGGCTCATTGAGCGGCTGAGCCCTCCCGTGTCCCAAGCG
GTGCAGGGGGTCTTCGATCCGGTTCTCGACCGTTGTGTATACGAAGACCG
CGCGTTGATGGAGCTCTTGGCCAAGGTGCCTGAGGAGCAGGCCCTCAAAG
TATTGGATACATACTGCGCGAACGTGCAACGGCAAGGGAGTGGACGGATC
CAGAATAAGGCTGCTTACCTCATGTCGCTCATTCAATCGTACAAGCTTGG
CCCTGCGCCGGGAACCATGGGGTCGGCTCAGAGGCTCATTGAGCGGCTGA
GCCCTCCCGTGTCCCAAGCGGTGCAGGGGGTCTTCGATCCGGTTCTCGAC
CGTTGTGTATACGAAGACCGCGCGTTGATGGAGCTCTTGGCCAAGGTGCC
TGAGGAGCAGGCGCTGGCAGCGCTTAAAAAGTACCGCGCGACCGTTCAGC
GCCGCGGACGAGACGCGATCGAAAACCGTTGTGGGTACTTAATAGGCTTC
CTCAAGCAGTATCAAGACGGGGTGGCTGTCGTCGGCGTGCCTGGCAACGC
GATGCACCATTCCCGCAATGCTCCCGCGTTGAGCTCGAATGGCGATGGCC
AGCAATCTACGAACGGTTCGTCAGGCCAATCTTCCTCGGCGGCAAACGGG
AACAACCCGAATGCGACCAGCTCGAGGAACGGTACGATGACCGGCGCGGG
AAGCGTTCAGTCCGCGACGTCGACGTCTTCCTCGCAAGGGACGGCGGCCG
GGTACGGGGGGCTCGGGGGCGGCAGTACGTCGGGAGTCCGACCGATCACA
TACCTTCAGGCTCCCGTTCGGAAGGAGCTCGAGAAGTTGTTCGAGTCAGG
TAGGGACAAGACTGTCCTCGAAGACGTTGGGCTGATCAAGCAGCTGTCGA
GGCTAGGCGAGGAACAGGCCCTAGCCGCACTCAAGAACTACAAGGAGGCT
TCCAAGCACCGGCGAGACATCCACAACAAATCCGCCTACTTGATGGGAAT
TCTGCGTGGCTACATCGAGGGCACTACCCCTATCTCCAAAGCCCCCTGGG
AAGGAGGGGGGAACGATGATGGTTCGGGCGTTCGTTCATCCATCGCGCCC
GGTCCTCCCACGTCGTTGCTCCCCCCCGGAAGCAGTCGGGCGCGAGGGCG
CGGTCGGGGTCCCGGGACGGTCGATATCGAACGTAGCGACCCAAATTCGC
AATCGAACGTGCCGTCGTCACCGCAGCCGCCACCTCAACCGCAGGCGGGG
CCTCCGCCCCAACCTCCGGTGACGCCTCCTCTTGCGCCCCAGGCCGCTGC
TCACGGGCCGCGGGAGCTGGGCGGATTCACGAGTGCTCCTGCGCAGTCTC
AACTACTACCGTCGCCACCGCCTCCCGTTGCGCATTCGGCCGCACCGTTG
AATTCGATATCCGCGACACCATCGACCTCTCCGCTAGCGTCGCCTCTCGT
CGGAGGCGACGGGCATTTCTTTGCAGGCATGATAGGGCGCAACGGTGTGG
GCGGAGACTCCGCTCACAATCGGTACGACCCGTCGCACAGCCTCCTCTAC
CTGAACGACAGCGTTGCGCACCAGCAACCCCTACGGCACGTTTCTCCTCA
CGAGTCGCTGTTTGGCGGCAGTCATCTGTCGGCGAACTACCATGGAGGGC
AGGGGCAGACGTTGGTTGGGCCAGGTTTACTCGGGGGCGATTTTCTGTCG
ACTGGTGGGGGTGGCGATCGGGTTGGTGCTTCACCCCCACTTGGCGCTGC
TCACGCGGGCGGGCCTGGCTCACTTTTTGGGTCAGGATTACTTGCGGGAG
ACAACATCAACAGCTGCAGCAACGGCACCCTTGGAAACACTGTTCCACCT
TCCCCCGGCTCGGGCTCGGGTCTTGGCTCCACGTCGGGGTTTGGCTCGTG
CTTCTTGCCCGGCGCTGGCTCGGGAGTGGAGTCTCCTCTGAGCAGCGATG
CGGGGAATGATACGGCTAGTACGCTTACGTATTCCACGACGTATTCCGCG
ACAGCGGTGGCGTCGGCGGGATCCTTGTCGGTAGCAGGATCGTCGCCTTG
TAACGGTTCGACGGACGGTCCTTCTAGTAGTTCCCCGGCATCAGGAGAGG
GCAGGGAGAACAACGATTCGTTGAACGGCAACGTCAACGGTGTGGTGGAT
GTGCTGACACGGCTCAATTTGAGCAAGTACGTGCCGATACTAGCGGAGGC
GGAGGTCGATCTGGACGCGCTGCGACTTTTCGGCGAGGCGCTGGCAGCGC
TTAAAAAGTACCGCGCGACCGTTCAGCGCCGCGGACGAGACGCGATCGAA
AACCGTTGTGGGTACTTAATAGGCTTCCTCAAGCAGTATCAAGACGGGGT
GGCTGTCGTCGGCGTGCCTGGCAACGCGATGCACCATTCCCGCAATGCTC
CCGCGTTGAGCTCGAATGGCGATGGCCAGCAATCTACGAACGGTTCGTCA
GGCCAATCTTCCTCGGCGGCAAACGGGAACAACCCGAATGCGACCAGCTC
GAGGAACGGTACGATGACCGGCGCGGGAAGCGTTCAGTCCGCGACGTCGA
CGTCTTCCTCGCAAGGGACGGCGGCCGGGTACGGGGGGCTCGGGGGCGGC
AGTACGTCGGGAGTCCGACCGATCACATACCTTCAGGCTCCCGTTCGGAA
GGAGCTCGAGAAGTTGTTCGAGTCAGGTAGGGACAAGACTGTCCTCGAAG
ACGTTGGGCTGATCAAGCAGCTGTCGAGGCTAGGCGAGGAACAGGCCCTA
GCCGCACTCAAGAACTACAAGGAGGCTTCCAAGCACCGGCGAGACATCCA
CAACAAATCCGCCTACTTGATGGGAATTCTGCGTGGCTACATCGAGGGCA
CTACCCCTATCTCCAAAGCCCCCTGGGAAGGAGGGGGGAACGATGATGGT
TCGGGCGTTCGTTCATCCATCGCGCCCGGTCCTCCCACGTCGTTGCTCCC
CCCCGGAAGCAGTCGGGCGCGAGGGCGCGGTCGGGGTCCCGGGACGGTCG
ATATCGAACGTAGCGACCCAAATTCGCAATCGAACGTGCCGTCGTCACCG
CAGCCGCCACCTCAACCGCAGGCGGGGCCTCCGCCCCAACCTCCGGTGAC
GCCTCCTCTTGCGCCCCAGGCCGCTGCTCACGGGCCGCGGGAGCTGGGCG
GATTCACGAGTGCTCCTGCGCAGTCTCAACTACTACCGTCGCCACCGCCT
CCCGTTGCGCATTCGGCCGCACCGTTGAATTCGATATCCGCGACACCATC
GACCTCTCCGCTAGCGTCGCCTCTCGTCGGAGGCGACGGGCATTTCTTTG
CAGGCATGATAGGGCGCAACGGTGTGGGCGGAGACTCCGCTCACAATCGG
TACGACCCGTCGCACAGCCTCCTCTACCTGAACGACAGCGTTGCGCACCA
GCAACCCCTACGGCACGTTTCTCCTCACGAGTCGCTGTTTGGCGGCAGTC
ATCTGTCGGCGAACTACCATGGAGGGCAGGGGCAGACGTTGGTTGGGCCA
GGTTTACTCGGGGGCGATTTTCTGTCGACTGGTGGGGGTGGCGATCGGGT
TGGTGCTTCACCCCCACTTGGCGCTGCTCACGCGGGCGGGCCTGGCTCAC
TTTTTGGGTCAGGATTACTTGCGGGAGACAACATCAACAGCTGCAGCAAC
GGCACCCTTGGAAACACTGTTCCACCTTCCCCCGGCTCGGGCTCGGGTCT
TGGCTCCACGTCGGGGTTTGGCTCGTGCTTCTTGCCCGGCGCTGGCTCGG
GAGTGGAGTCTCCTCTGAGCAGCGATGCGGGGAATGATACGGCTAGTACG
CTTACGTATTCCACGACGTATTCCGCGACAGCGGTGGCGTCGGCGGGATC
CTTGTCGGTAGCAGGATCGTCGCCTTGTAACGGTTCGACGGACGGTCCTT
CTAGTAGTTCCCCGGCATCAGGAGAGGGCAGGGAGAACAACGATTCGTTG
AACGGCAACGTCAACGGTGTGGTGGATGTGCTGACACGGCTCAATTTGAG
CAAGTACGTGCCGATACTAGCGGAGGCGGAGGTCGATCTGGACGCGCTGC
GACTTTTCGGCGAGGACGACTTGAAGGACCTAGGGTTTCCAAAAGGGCCG
CGCATCAAGCTTCTTCACGAGGTGCAAAACCTCAACTTCCCGCAAAGGGC
GTGAGACGACTTGAAGGACCTAGGGTTTCCAAAAGGGCCGCGCATCAAGC
TTCTTCACGAGGTGCAAAACCTCAACTTCCCGCAAAGGGCGTGA
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