mRNA_P-lacustris_contig1250.1825.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1250.1825.1 vs. uniprot
Match: A0A6H5JE39_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE39_9PHAE) HSP 1 Score: 388 bits (996), Expect = 5.040e-123 Identity = 211/302 (69.87%), Postives = 227/302 (75.17%), Query Frame = 1
Query: 457 DSW----QGKAPGVVRASHPHLRSKNRINEDNEPRLEAFYETWEAYLAETKLTPDRIINTDETSSTPQGTKSGKAVVPTGTKVPGARCSNSRENTTVVASTGADGHIYNPTIIYKGQRMQPAWIQDKNGVPDSKYTVTESSFIQSHVFLDYLRDLREHLDARGLQGKIALALDGHASHTTFDDITLAISLDIDVFQLPSHTSHITHPLDVGTFGG--RRYVRWTSVRSEASSRSSTGCSRPTH*KMGEESGEARHGWRDCGGMERELHACE*HGGVQRGGLVAGEHGEGHQPTTQQMEATGE 1344
DSW + PG+ + H+ NRIN D+EPRLEAFY TWEAYLAETKLTPDRII TD TSSTPQGTKS KA+VPTGTKVPGAR SNSRENTTVVAS G DGH YNP IIYKGQR QPAWIQDKNGVPD+KYTVTE SFIQSHVFLDYLRDLRE LDARGLQG++ L LDGHASH TFD I+LAISLDID+FQL SHTSHIT PLDVGTFG ++ R + K+G S R MERELHACE HGGVQRGGLVAGEHGEGHQPTT+Q EATGE
Sbjct: 471 DSWLEGFMARHPGLSERA-THIYEANRINVDDEPRLEAFYGTWEAYLAETKLTPDRIIKTDGTSSTPQGTKSVKAIVPTGTKVPGARRSNSRENTTVVASIGPDGHTYNPIIIYKGQRTQPAWIQDKNGVPDAKYTVTEPSFIQSHVFLDYLRDLREQLDARGLQGRVPLVLDGHASHKTFDAISLAISLDIDLFQLSSHTSHITQPLDVGTFGTFTKKLTRVLTAYPL---------------KIGGRSPVKRDMAGVIADMERELHACEQHGGVQRGGLVAGEHGEGHQPTTRQEEATGE 756
BLAST of mRNA_P-lacustris_contig1250.1825.1 vs. uniprot
Match: A0A6H5L1T0_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T0_9PHAE) HSP 1 Score: 360 bits (923), Expect = 1.470e-111 Identity = 201/318 (63.21%), Postives = 231/318 (72.64%), Query Frame = 1
Query: 139 PRRLSMQCAALRS-DVV*GCAADTYGLNPTSLHRRVKKEVAIDARVGPGTVLCKEEEVS*NMC*STPPDTFCCWIGGS*KKLCGRSASTDAR-CPGTQTRARGTAGLRDSWQGKAPGVVRASHPHLRSKNRINEDNEPRLEAFYETWEAYLAETKLTPDRIINTDETSSTPQGTKSGKAVVPTGTKVPGARCSNSRENTTVVASTGADGHIYNPTIIYKGQRMQPAWIQDKNGVPDSKYTVTESSFIQSHVFLDYLRDLREHLDARGLQGKIALALDGHASHTTFDDITLAISLDIDVFQLPSHTSHITHPLDVGTFG 1086
P + A+RS ++ AA TYGL SLH RVK +VAIDARVGPGTVL KEEE F +G + R+ TD R P + G + L + + + PG+ + H+ NRINED EPRL+AFY+ W YL ETKL P+RI+NTDETSSTPQGTKSGKA+V GTKVPGAR SNSRENTTVVA+ GADGH ++PTII+KGQRMQPAWIQD NGVPD+KYTVTESSFIQSHVFLDYLRDLR+ LDARGL GK AL LDGHASHTTFD I+L ISLD+D+FQLPSHTSHIT PLDVGTFG
Sbjct: 22 PEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFL-LLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWL-EGFMARHPGLSERA-THIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETSSTPQGTKSGKAIVARGTKVPGARRSNSRENTTVVATIGADGHTFHPTIIFKGQRMQPAWIQDNNGVPDAKYTVTESSFIQSHVFLDYLRDLRKQLDARGLLGKAALVLDGHASHTTFDAISLGISLDMDLFQLPSHTSHITQPLDVGTFG 336
BLAST of mRNA_P-lacustris_contig1250.1825.1 vs. uniprot
Match: A0A6H5KK08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK08_9PHAE) HSP 1 Score: 338 bits (868), Expect = 2.610e-108 Identity = 203/350 (58.00%), Postives = 225/350 (64.29%), Query Frame = 1
Query: 139 PRRLSMQCAALRS-DVV*GCAADTYGLNPTSLHRRVKKEVAIDARVGPGTVLCKEEEVS*NMC*STPPDTFCCWIGGS*KKLCGRSASTDARCPGTQTRARGTAGLRDSWQGKAPGVVRASHPHLRSKNRINEDNEPRLEAFYETWEAYLAET-----------KLT----------------------PDRIINTDETSSTPQGTKSGKAVVPTGTKVPGARCSNSRENTTVVASTGADGHIYNPTIIYKGQRMQPAWIQDKNGVPDSKYTVTESSFIQSHVFLDYLRDLREHLDARGLQGKIALALDGHASHTTFDDITLAISLDIDVFQLPSHTSHITHPLDVGTFG 1086
P R A+RS ++ AADTYGLNPTSLHRRVKKEVAIDARVGPGTVLCKEEE F G K+ + + P + G + L + + + PG+ + H+ NRINED+EPRLEAFYETWEA LAET K T P D SSTP+GT SGKA+V TGTKVPGAR SNSRENTT VAS G DGH +NP IYKGQRMQPA IQDKNGVPD+ YTVTESSFIQSHVFLDYLRDLRE LD GLQGK+AL LDGHASHTTFD I+LA SLDID+FQL SHTSHIT PLDVGTFG
Sbjct: 8 PERAQKAIDAVRSGEMSFRVAADTYGLNPTSLHRRVKKEVAIDARVGPGTVLCKEEEDFVEDVLMHAFRHFLLLGRGELKEAVRKICLDGRKVPWDPDKGPGDSWL-EGFMARHPGLSERA-THICEANRINEDDEPRLEAFYETWEACLAETSSRRXKQTGSTKTTSLALKPSTRHGKRASRRQAHAGPHHQHGRDRRSSTPRGTTSGKAIVSTGTKVPGARRSNSRENTTAVASIGTDGHTHNPITIYKGQRMQPASIQDKNGVPDATYTVTESSFIQSHVFLDYLRDLREQLDG-GLQGKVALVLDGHASHTTFDGISLATSLDIDLFQLRSHTSHITQPLDVGTFG 354
BLAST of mRNA_P-lacustris_contig1250.1825.1 vs. uniprot
Match: A0A6H5L259_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L259_9PHAE) HSP 1 Score: 314 bits (804), Expect = 1.010e-98 Identity = 159/199 (79.90%), Postives = 170/199 (85.43%), Query Frame = 1
Query: 505 HLRSKNRINEDNEPRLEAFYETWEAYLAETKLTPDRIINTD-----ETSSTPQGTKSGKAVVPTGTKVPGARCSNSRENTTVVASTGADGHIYNPTIIYKGQRMQPAWIQDKNGVPDSKYTVTESSFIQSHVFLDYLRDLREHLDARGLQGKIALALDGHASHTTFDDITLAISLDIDVFQLPSHTSHITHPLDVGTFG 1086
H+ NR+NED+EPRLEAFYETWE YLAE+KLTP + + STPQGTK GKA+VPTGTKVPGAR SNSRENTTVVAS GADGH YNP IIYKGQRMQPAWIQDKNG+PD+KYTVTESSFIQSHVFLDY RDL E LDARGLQG IAL LDGHASHTTFD I+LAISLDID+FQLPSHTSHIT PLDVGTFG
Sbjct: 13 HIYEANRMNEDDEPRLEAFYETWEVYLAESKLTPSPPLCATARCELRSCSTPQGTKPGKAIVPTGTKVPGARRSNSRENTTVVASIGADGHTYNPIIIYKGQRMQPAWIQDKNGIPDAKYTVTESSFIQSHVFLDYPRDLCEQLDARGLQGNIALVLDGHASHTTFDAISLAISLDIDLFQLPSHTSHITQPLDVGTFG 211
BLAST of mRNA_P-lacustris_contig1250.1825.1 vs. uniprot
Match: A0A6H5JY96_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY96_9PHAE) HSP 1 Score: 302 bits (773), Expect = 1.790e-93 Identity = 168/309 (54.37%), Postives = 211/309 (68.28%), Query Frame = 1
Query: 196 AADTYGLNPTSLHRRVKKEVAIDARVGPGTVLCKEEEVS*NMC*STPPDTFCCW----IGGS*KKLC--GRSASTDA-RCPGTQTRARGTAGLRDSWQGKAPGVVRASHPHLRSKNRINEDNEPRLEAFYETWEAYLAETKLTPDRIINTDET-----SSTPQGTKSGKAVVPTGTKVPGARCSNSRENTTVVASTGADGHIYNPTIIYKGQRMQPAWIQDKNGVPDSKYTVTESSFIQSHVFLDYLRDLREHLDARGLQGKIALALDGHASHTTFDDITLAISLDIDVFQLPSHTSHITHPLDVGTFG 1086
AA YG+N +L RR+ +A+DARVGP TVL K ++ + F + + + + LC GR D + PG D + + P + + H+ NRINE++EPRL+ Y+ W AY+ E KLT DR++NTDET STPQGTK+GKA G+KVPG R +NSRENTT+V++ GADGH Y+PTIIYKGQRMQP W+ D NG+P ++YTVTESSFIQS VFL YLR+LRE L+ARGLQGK+AL LDGHASHTTF+ I+LAISLDID+FQLPSHTSH+T PLDVGTFG
Sbjct: 35 AAKAYGVNKDALSRRLSGAMAMDARVGPETVLSKADDYAVEDALIYASRHFLSFGRQQLIDAVRVLCLHGRPVPWDPDKGPGRS--------WLDGFMARHPALSERT-THIYEANRINENDEPRLKDVYKAWGAYVMENKLTADRVLNTDETVEFWQGSTPQGTKAGKAFALKGSKVPGTRRANSRENTTIVSTIGADGHTYDPTIIYKGQRMQPDWVADDNGIPGARYTVTESSFIQSDVFLSYLRNLREQLNARGLQGKVALVLDGHASHTTFEAISLAISLDIDLFQLPSHTSHMTQPLDVGTFG 334
BLAST of mRNA_P-lacustris_contig1250.1825.1 vs. uniprot
Match: A0A6H5JUK8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK8_9PHAE) HSP 1 Score: 303 bits (775), Expect = 2.370e-92 Identity = 179/322 (55.59%), Postives = 209/322 (64.91%), Query Frame = 1
Query: 139 PRRLSMQCAALRS-DVV*GCAADTYGLNPTSLHRRVKKEVAIDARVGPGTVLCKEEEVS*NMC*STPPDTFCCWIGGS*KKLCGRSASTDAR-CPGTQTRARGTAGLRDSW----QGKAPGVVRASHPHLRSKNRINEDNEPRLEAFYETWEAYLAETKLTPDRIINTDETSSTPQGTKSGKAVVPTGTKVPGARCSNSRENTTVVASTGADGHIYNPTIIYKGQRMQPAWIQDKNGVPDSKYTVTESSFIQSHVFLDYLRDLREHLDARGLQGKIALALDGHASHTTFDDITLAISLDIDVFQLPSHTSHITHPLDVGTFG 1086
P + A+RS ++ AA TYGL SLH RVKK+VAIDA+VGPGTVL KE E F +G K R+ +D R P + G DSW + PG+ + H+ N INED+E RLEAFY+ W YLAETKL P+ + +++ GTKVPGAR SNSRENTTVV + GA GH ++PTII+KGQRMQPAWIQD NGVPD+KYT+TE SF QSHVFLDYLRDLR+ LDARGLQGK AL LDGHASHTTFD I+LA+SLDID FQLPSHTSHIT PLDVGTFG
Sbjct: 60 PEQAQKAVDAVRSGEMSLRVAAKTYGLPLASLHDRVKKKVAIDAKVGPGTVLSKEGEDFVEDVLIYASRHFL-LLGRRELKDAVRNICSDGRKVPWNPDKGPG-----DSWLEGVMTRHPGLSERA-THINEANPINEDDERRLEAFYKAWAEYLAETKLPPEXVSAVSVSTAV-------------GTKVPGARRSNSRENTTVVPTIGAGGHTFHPTIIFKGQRMQPAWIQDNNGVPDAKYTITEFSFTQSHVFLDYLRDLRQQLDARGLQGKTALVLDGHASHTTFDAISLALSLDIDAFQLPSHTSHITQPLDVGTFG 361
BLAST of mRNA_P-lacustris_contig1250.1825.1 vs. uniprot
Match: A0A6H5K7A1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7A1_9PHAE) HSP 1 Score: 259 bits (662), Expect = 8.100e-81 Identity = 130/150 (86.67%), Postives = 137/150 (91.33%), Query Frame = 1
Query: 637 STPQGTKSGKAVVPTGTKVPGARCSNSRENTTVVASTGADGHIYNPTIIYKGQRMQPAWIQDKNGVPDSKYTVTESSFIQSHVFLDYLRDLREHLDARGLQGKIALALDGHASHTTFDDITLAISLDIDVFQLPSHTSHITHPLDVGTFG 1086
STPQGTK GKA+VPTGTKVPGAR S+SRENTTVVAS GADG YNP IIYKGQRMQPAWIQDKNGV D+KYTVT SSFIQSHV LDYLRDLRE LDARGLQGK++L LDGHASHTTFD I+LAISLDID+FQLPSHTSHIT PLDVGTFG
Sbjct: 12 STPQGTKWGKAIVPTGTKVPGARRSHSRENTTVVASIGADGQTYNPIIIYKGQRMQPAWIQDKNGVLDAKYTVTGSSFIQSHVLLDYLRDLREQLDARGLQGKVSLVLDGHASHTTFDAISLAISLDIDLFQLPSHTSHITQPLDVGTFG 161
BLAST of mRNA_P-lacustris_contig1250.1825.1 vs. uniprot
Match: A0A6H5KM49_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM49_9PHAE) HSP 1 Score: 248 bits (633), Expect = 1.010e-74 Identity = 124/148 (83.78%), Postives = 133/148 (89.86%), Query Frame = 1
Query: 637 STPQGTKSGKAVVPTGTKVPGARCSNSRENTTVVASTGADGHIYNPTIIYKGQRMQPAWIQDKNGVPDSKYTVTESSFIQSHVFLDYLRDLREHLDARGLQGKIALALDGHASHTTFDDITLAISLDIDVFQLPSHTSHITHPLDVGT 1080
STPQGT+SGKA+VPTGTKVPGAR SNSREN TVVA GADG YNP IIY+GQRM PA IQDKNGVPD+KYTVTESSFIQS VFLDYLRDLRE LDARGLQGK+AL LDGHASHTTFD ++L ISLDID+FQLPSHTSHIT PL+VGT
Sbjct: 12 STPQGTRSGKAIVPTGTKVPGARRSNSRENATVVACIGADGQSYNPIIIYQGQRMHPACIQDKNGVPDAKYTVTESSFIQSDVFLDYLRDLREQLDARGLQGKVALVLDGHASHTTFDAVSLVISLDIDLFQLPSHTSHITQPLNVGT 159
BLAST of mRNA_P-lacustris_contig1250.1825.1 vs. uniprot
Match: A0A6H5KJ81_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ81_9PHAE) HSP 1 Score: 253 bits (646), Expect = 1.460e-74 Identity = 127/150 (84.67%), Postives = 135/150 (90.00%), Query Frame = 1
Query: 637 STPQGTKSGKAVVPTGTKVPGARCSNSRENTTVVASTGADGHIYNPTIIYKGQRMQPAWIQDKNGVPDSKYTVTESSFIQSHVFLDYLRDLREHLDARGLQGKIALALDGHASHTTFDDITLAISLDIDVFQLPSHTSHITHPLDVGTFG 1086
STPQ TKS KA+VP GTKVPGAR +NSRENTTVVAS GADGH YNP IIYKGQRMQPAWIQDKNGVPD+KYT TESSFIQSHVFL YLRDLRE LD+RGLQGK+AL LDGHASHTTFD I+LAISLDI++FQLP HT HIT PLDVGTFG
Sbjct: 12 STPQRTKSEKAIVPGGTKVPGARRTNSRENTTVVASIGADGHNYNPFIIYKGQRMQPAWIQDKNGVPDAKYTDTESSFIQSHVFLGYLRDLREQLDSRGLQGKVALVLDGHASHTTFDAISLAISLDINLFQLPFHTPHITQPLDVGTFG 161
BLAST of mRNA_P-lacustris_contig1250.1825.1 vs. uniprot
Match: A0A6H5J6D5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6D5_9PHAE) HSP 1 Score: 243 bits (621), Expect = 1.540e-69 Identity = 124/151 (82.12%), Postives = 132/151 (87.42%), Query Frame = 1
Query: 640 TPQGTKSGKAVVPTGTKVPGARCSNSRENTTVVASTGADGHIYNPTIIYKGQRMQPAWIQDKNGVPDSKYTVTESSFIQSHVFLDYLRDLREHLDARGLQGKIALALDGHASHTTFDDITLAISLDIDVFQLPSHTSHITHPLDVGTFGGR 1092
TPQGTKSGKA+VPTGTKVPGAR S SRENTTVVAS GADG YNP IIYKGQRMQP WIQDKNGVPD+KYTVTESSF++SHVFLDYL+DLRE LDARGLQ +AL LD HASHTTF I+LAISLDID+FQLPSHTSHIT PLDV G R
Sbjct: 91 TPQGTKSGKAIVPTGTKVPGARRSTSRENTTVVASIGADGPTYNPIIIYKGQRMQPVWIQDKNGVPDAKYTVTESSFVRSHVFLDYLQDLREQLDARGLQ--VALVLDDHASHTTFHAISLAISLDIDLFQLPSHTSHITQPLDVARHGWR 239 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1250.1825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1250.1825.1 >prot_P-lacustris_contig1250.1825.1 ID=prot_P-lacustris_contig1250.1825.1|Name=mRNA_P-lacustris_contig1250.1825.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=239bp MASPIRSTPSRSHPSSRATCSSTTFETSANISMRAACRAKLPLRSTATPRback to top mRNA from alignment at P-lacustris_contig1250:49299..51655+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1250.1825.1 ID=mRNA_P-lacustris_contig1250.1825.1|Name=mRNA_P-lacustris_contig1250.1825.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2357bp|location=Sequence derived from alignment at P-lacustris_contig1250:49299..51655+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1250:49299..51655+ >mRNA_P-lacustris_contig1250.1825.1 ID=mRNA_P-lacustris_contig1250.1825.1|Name=mRNA_P-lacustris_contig1250.1825.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1434bp|location=Sequence derived from alignment at P-lacustris_contig1250:49299..51655+ (Pleurocladia lacustris SAG_25_93)back to top |