mRNA_P-lacustris_contig1239.1740.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1239.1740.1
Unique NamemRNA_P-lacustris_contig1239.1740.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig1239.1740.1 vs. uniprot
Match: A0A6H5K9M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M4_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 2.620e-59
Identity = 103/121 (85.12%), Postives = 110/121 (90.91%), Query Frame = 1 
Query:  376 NGRPGMGPPQNKTGVPSPQKPSLQMPTEVTARHILVKHKGSRRPASWQDPTGAAIKQRTQAQATAILQGLRPGIKGQDDFSKVAGARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVG 738
            NGRPGMG PQN+ GVPSPQKP  +  TEVTARHILVKHKGSRRPASWQDP+G +I+QRTQ QAT+ILQGLR GIK Q+DFSKVA ARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVG
Sbjct:  367 NGRPGMGGPQNRMGVPSPQKPQPKPITEVTARHILVKHKGSRRPASWQDPSGVSIRQRTQGQATSILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVG 487
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BLAST of mRNA_P-lacustris_contig1239.1740.1 vs. uniprot
Match: D7G0K6_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K6_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 9.430e-48
Identity = 83/100 (83.00%), Postives = 87/100 (87.00%), Query Frame = 1 
Query:  415 GVPSPQKPSLQMPTEVTARHILVKHKGSRRPASWQDPTGAAIKQRTQAQATAILQGLRPGIKGQDDFSKVAGARSDCSSAKRGGDLGTFGRGKMQRAFED 714
            GVPSPQKP  +  TEVTARHILVKHKGSRRPASWQDP GA+IKQRTQAQA +ILQGLR GIK Q+DFSKVA ARSDCSSAKRGGDLGTFGRGKMQ    D
Sbjct:    2 GVPSPQKPQPKAITEVTARHILVKHKGSRRPASWQDPAGASIKQRTQAQAASILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQLGCSD 101
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BLAST of mRNA_P-lacustris_contig1239.1740.1 vs. uniprot
Match: A0A836CKW2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW2_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.100e-27
Identity = 54/93 (58.06%), Postives = 68/93 (73.12%), Query Frame = 1 
Query:  460 VTARHILVKHKGSRRPASWQDPTGAAIKQRTQAQATAILQGLRPGIKGQDDFSKVAGARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVG 738
            + ARHILVKH+GSRRPASW+DP G  I  R++ QA A+L  +R  I+  +DF++VA   SDCSSA+ GGDLG FG G+MQ+AFED    L VG
Sbjct:    1 MRARHILVKHQGSRRPASWKDPEGIEISARSREQAIAMLNDIRASIRTPEDFARVAQTASDCSSARNGGDLGEFGPGQMQKAFEDGVLALGVG 93
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BLAST of mRNA_P-lacustris_contig1239.1740.1 vs. uniprot
Match: A0A7S2Y508_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y508_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.520e-26
Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 1 
Query:  454 TEVTARHILVKHKGSRRPASWQDPTGAAIKQRTQAQATAILQGLRPGIKGQDDFSKVAGARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVG 738
            ++V A H+L+KH GSRRPASW+DP G  I+ R++ QA  ILQ LR  I G +DF+ +A   SDCSSA+ GGDLG FG G+M + FEDA   L +G
Sbjct:    2 SQVRASHLLIKHSGSRRPASWKDPDGNEIRARSRDQAVQILQTLRSQISGPEDFANLAAQHSDCSSARNGGDLGPFGPGQMMKPFEDATRALQIG 96
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BLAST of mRNA_P-lacustris_contig1239.1740.1 vs. uniprot
Match: A0A4P1RFD9_LUPAN (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Lupinus TaxID=3869 RepID=A0A4P1RFD9_LUPAN)

HSP 1 Score: 108 bits (270), Expect = 3.990e-26
Identity = 57/95 (60.00%), Postives = 68/95 (71.58%), Query Frame = 1 
Query:  457 EVTARHILVKHKGSRRPASWQDPTGAAIKQRTQAQATAILQGLRPGI-KGQDDFSKVAGARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVG 738
            EV A HIL+KH+GSRR ASW+DP G  IK  T+  A + L+ L+  I  G+  F  VA   SDCSSAKRGGDLG FGRG+MQ+ FE+AAFGL VG
Sbjct:   18 EVRASHILIKHEGSRRKASWKDPEGRVIKNTTRENAVSQLKALQDDIVSGKVKFEDVAARYSDCSSAKRGGDLGPFGRGQMQKPFEEAAFGLKVG 112
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BLAST of mRNA_P-lacustris_contig1239.1740.1 vs. uniprot
Match: A0A484LBV8_9ASTE (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484LBV8_9ASTE)

HSP 1 Score: 107 bits (267), Expect = 7.670e-26
Identity = 55/95 (57.89%), Postives = 68/95 (71.58%), Query Frame = 1 
Query:  457 EVTARHILVKHKGSRRPASWQDPTGAAIKQRTQAQATAILQGLRPGI-KGQDDFSKVAGARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVG 738
            +V A HIL+KH+GSRR ASW+DP G  I+  T+  A ++L+GL   I  G+  F  +A   SDCSSAKRGGDLGTFGR +MQ+ FEDAAF L VG
Sbjct:    5 QVRASHILIKHQGSRRTASWKDPEGRVIRNTTRDAAVSLLRGLHQDILSGKSLFEDIASRYSDCSSAKRGGDLGTFGRRQMQKPFEDAAFALEVG 99
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BLAST of mRNA_P-lacustris_contig1239.1740.1 vs. uniprot
Match: A0A2H9ZWQ0_9ASPA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZWQ0_9ASPA)

HSP 1 Score: 107 bits (267), Expect = 7.890e-26
Identity = 56/95 (58.95%), Postives = 65/95 (68.42%), Query Frame = 1 
Query:  457 EVTARHILVKHKGSRRPASWQDPTGAAIKQRTQAQATAILQGLRPGI-KGQDDFSKVAGARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVG 738
            +V A HIL+KH+GSRR ASW+DP G  I   T+  A A L  LR  I  GQ  F +VA   SDCSSAKRGGDLG FGRG+MQ+ FE+AAF L  G
Sbjct:    6 QVRASHILIKHEGSRRKASWKDPDGRVISATTRDAAAANLMALRDSIVSGQSTFEEVASRHSDCSSAKRGGDLGRFGRGQMQKPFEEAAFALKAG 100
[Close]
BLAST of mRNA_P-lacustris_contig1239.1740.1 vs. uniprot
Match: A0A1Z5RGG3_SORBI (Peptidyl-prolyl cis-trans isomerase (Fragment) n=2 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1Z5RGG3_SORBI)

HSP 1 Score: 110 bits (274), Expect = 7.920e-26
Identity = 58/102 (56.86%), Postives = 69/102 (67.65%), Query Frame = 1 
Query:  436 PSLQMPTEVTARHILVKHKGSRRPASWQDPTGAAIKQRTQAQATAILQGLRPGI-KGQDDFSKVAGARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVG 738
            PS     +V A HIL+KH+GSRR ASW+DP G AI   T+  A  +++ LR  I  G   F  +A   SDCSSAKRGGDLG+FGRGKMQ+AFE AAF L VG
Sbjct:   87 PSSSAEEKVRASHILIKHEGSRRKASWRDPEGVAISATTRDDAADLVRALRDQIVSGDRKFEDIAAENSDCSSAKRGGDLGSFGRGKMQKAFEKAAFALKVG 188
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BLAST of mRNA_P-lacustris_contig1239.1740.1 vs. uniprot
Match: A0A833VFC4_9POAL (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VFC4_9POAL)

HSP 1 Score: 107 bits (266), Expect = 1.020e-25
Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = 1 
Query:  457 EVTARHILVKHKGSRRPASWQDPTGAAIKQRTQAQATAILQGLRPGI-KGQDDFSKVAGARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVG 738
            EV A HIL+KH+GSRR ASW+DP G  I   T+  A A LQ LR  +  G+  FS +A   SDCSSAKRGGDLG FGRG+MQ+ FEDA + L VG
Sbjct:    3 EVRASHILIKHEGSRRKASWKDPDGRVISTTTREVAAARLQSLREEVVSGRAHFSDLASVHSDCSSAKRGGDLGKFGRGQMQKPFEDATYALRVG 97
[Close]
BLAST of mRNA_P-lacustris_contig1239.1740.1 vs. uniprot
Match: A0A7N0TCZ2_KALFE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TCZ2_KALFE)

HSP 1 Score: 107 bits (266), Expect = 1.080e-25
Identity = 57/95 (60.00%), Postives = 65/95 (68.42%), Query Frame = 1 
Query:  457 EVTARHILVKHKGSRRPASWQDPTGAAIKQRTQAQATAILQGLRPGI-KGQDDFSKVAGARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVG 738
            +V A HIL+KH+GSRR ASW+DP G  I   T+  A A L  LR  I  G+  F  VA   SDCSSAKRGGDLG FGRG+MQR FE+A FGL VG
Sbjct:    5 QVRASHILIKHQGSRRKASWKDPEGRIISSTTRESAVAQLTALRDDIVAGKAKFGDVAATYSDCSSAKRGGDLGPFGRGQMQRPFEEATFGLQVG 99
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1239.1740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9M4_9PHAE2.620e-5985.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0K6_ECTSI9.430e-4883.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca... [more]
A0A836CKW2_9STRA2.100e-2758.06Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A7S2Y508_9STRA2.520e-2654.74Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fibroc... [more]
A0A4P1RFD9_LUPAN3.990e-2660.00Peptidyl-prolyl cis-trans isomerase n=3 Tax=Lupinu... [more]
A0A484LBV8_9ASTE7.670e-2657.89Peptidyl-prolyl cis-trans isomerase n=3 Tax=Cuscut... [more]
A0A2H9ZWQ0_9ASPA7.890e-2658.95Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aposta... [more]
A0A1Z5RGG3_SORBI7.920e-2656.86Peptidyl-prolyl cis-trans isomerase (Fragment) n=2... [more]
A0A833VFC4_9POAL1.020e-2558.95Peptidyl-prolyl cis-trans isomerase n=1 Tax=Carex ... [more]
A0A7N0TCZ2_KALFE1.080e-2560.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Kalanc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1239contigP-lacustris_contig1239:25904..34954 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size794
Cds size429
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1239.1740.1prot_P-lacustris_contig1239.1740.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1239 26238..34923 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815553.8320155-UTR-P-lacustris_contig1239:25903..262371622815553.8320155-UTR-P-lacustris_contig1239:25903..26237Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1239 25904..26237 +
1693493608.3013349-UTR-P-lacustris_contig1239:25903..262371693493608.3013349-UTR-P-lacustris_contig1239:25903..26237Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1239 25904..26237 +
1622815553.9007847-UTR-P-lacustris_contig1239:34923..349541622815553.9007847-UTR-P-lacustris_contig1239:34923..34954Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1239 34924..34954 +
1693493608.362622-UTR-P-lacustris_contig1239:34923..349541693493608.362622-UTR-P-lacustris_contig1239:34923..34954Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1239 34924..34954 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815553.8489165-CDS-P-lacustris_contig1239:26237..263501622815553.8489165-CDS-P-lacustris_contig1239:26237..26350Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1239 26238..26350 +
1693493608.3120317-CDS-P-lacustris_contig1239:26237..263501693493608.3120317-CDS-P-lacustris_contig1239:26237..26350Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1239 26238..26350 +
1622815553.8627176-CDS-P-lacustris_contig1239:28219..283201622815553.8627176-CDS-P-lacustris_contig1239:28219..28320Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1239 28220..28320 +
1693493608.3276885-CDS-P-lacustris_contig1239:28219..283201693493608.3276885-CDS-P-lacustris_contig1239:28219..28320Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1239 28220..28320 +
1622815553.8752446-CDS-P-lacustris_contig1239:28954..291051622815553.8752446-CDS-P-lacustris_contig1239:28954..29105Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1239 28955..29105 +
1693493608.3395593-CDS-P-lacustris_contig1239:28954..291051693493608.3395593-CDS-P-lacustris_contig1239:28954..29105Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1239 28955..29105 +
1622815553.8874614-CDS-P-lacustris_contig1239:34859..349231622815553.8874614-CDS-P-lacustris_contig1239:34859..34923Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1239 34860..34923 +
1693493608.3509524-CDS-P-lacustris_contig1239:34859..349231693493608.3509524-CDS-P-lacustris_contig1239:34859..34923Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1239 34860..34923 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1239.1740.1

>prot_P-lacustris_contig1239.1740.1 ID=prot_P-lacustris_contig1239.1740.1|Name=mRNA_P-lacustris_contig1239.1740.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=143bp
MPAISPCSSSSSSRTVDRAWVPRRTKQAFPHRRSLPSRCPLRSPRGTFWS
STRGRGARRPGRTLPGPPSSRGPRRRRRPSFRGSGPASRARTTSPRSPVR
GRTAPAPNAAVTLALSAVEKCSARLKMRPLVCRWGFERSGFH*
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mRNA from alignment at P-lacustris_contig1239:25904..34954+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1239.1740.1 ID=mRNA_P-lacustris_contig1239.1740.1|Name=mRNA_P-lacustris_contig1239.1740.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=9051bp|location=Sequence derived from alignment at P-lacustris_contig1239:25904..34954+ (Pleurocladia lacustris SAG_25_93)
CGAGCCCGTCGCATTTTCTAGCAACCAAACGGTCGACCATCTTGCCTCTC
TCGCTTTGTCTCCAACTTCTTTCAATTCAAGCTCGAATGTCGGCTATGGT
AGGTCGCACAGAGCAAAAGCCTCTGCAGCACACGGGACATGTTGCCCCTT
CAAGTATTCAACAATTTCAACGGTGTCCTAGTCTTTGCCTCGACAGCAAC
TGACGTCTTAGTCCGTACCCCAATCAACCTTTAGCCCCAACCCTGCCCTC
AGCCACGCTTTCGCTTTAGCCCAAGTCCTATATAGTCGTATATCTTATCA
TGGGCATAACCCCGACTGACGTTAATTTCTTGGGATGCCGGCCATCAGCC
CATGCAGCAGCAGCAGCAGCAGCAGAACGGTCGACCGGGCATGGGTCCCC
CGCAGAACAAAACAGGCGTTCCCTCACCGCAGAAGCCTTCCCTCCAGGTG
ATCGCACTTCGCAGGTTGGGGGTGAGGGGTGTAAGTGTAGTATGGGTAAA
ATACGTGAGAGAAGTGTTGACAGGGAACTACGGGTATCCCGCTTGTATTG
TTCATATTGATCGCCAATCAATTCGGTGTCGGGCTACCACAACTTTTTGG
TTGTCATGTTGTCATGACCGCCATTAAATTTATTGCTGTTTTTGTTGTTA
TTATTATTATTTTTAGTATTATTATCATCATCATTATTATTATTATTATT
TTTTTTAATCATTTTTATTATTGTCATTTTTATTATTATTATTATTATTA
TTATTATTGTTGTTGTTATTTATTATTTTTGTTATTATTATCATTATTAT
TATTGTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA
TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTCATC
ATCATTATCATTATTATTATTATCATTATTATTATTATCATCATTATTAT
TATTATTATTATCATCATTATTATTTTTTTATTATTATTATTATTATTTT
TGTTATTGATATTATTGTTATTATTATTGTGATTATTGTTTATTGTTGTT
ATTATTATCATTATCATTATCATCATCATCATTATTATTGTTATCATCAT
TGTTATCATTAGCATTAGCATTATTATTCTGTCGTTGTTGTTGTTGTTGT
TGCCTAAACCCCCTGGGGGCTCACCCCTGCCTATTTTCTTTTCTTTTTTC
GTATCTTATCGCGTCTGTTTGTGTTGACTATTCGGGTCCTTTGTACCTTA
TTTTGTACCCCTGGGGTAGTCATTTTGTAACCACGGAAGTCGACCGCATC
AGTCGGACCAGTACTTGTACGGACAATAGAAGGTACTGAATACAGGTGGG
AACGGATTCTAGTGTGAAAAAAAGACAACGACGACGACGACAACAACAAC
AACAACATTTATTATGTTTTCTGAGGGTATTCTCACTGTCGTGCACGGGA
TGCTGAACACGAGTGTTACTTCCCGTTTATATGTGCTTGACCTCTTGTTC
AAAATGAGTTAATTGCTTTTGTTTTCTCGAACGTCGTATCCACGTATAGA
GATGGGTTTGGCTTACACTGTCTTACGAAAAAAAAGGGCACACATCGTTG
CCATTGGACGGCTAAATATTGCGTTCGTCGTTCGTCGTGTGCTGAACCAG
AACCTGAACCTAAAACTCCATCCTTTTTTTTTTTTTCTGCAAAAAACAGA
ACAGACCCATCTCTACCTAGGATATGACGTCCAGGGTAGATATTGCAATG
GATTCATTCATGTCGTGATCGTACTATTTCTCCACTGATCCTGGCACAAC
TACAATGATAACTCCTGTGTGGTTAACATGCTCAACAAGACAGTCTGGTA
GTCATCTTGTGTATCGGATTGCAGTAGTGGGAGGGTAGAGGAAGTGTCTG
GGGCATGGGGTCTCGTGTGTGGAGTAGGTTCAGTGTCTTGCCCGCGTGTG
CTGCGCAATAATGCCGTTTCGCTGTCCCGACGGTTTCGTCTCATGAAATA
AGTTGCCGACCACCGTATCTACCTTTCGTTCTCGTTGCGACCCCCCCCCT
CTTGCTATTGCTGCCGTGGACTGTGTCTGTTGTTTTGAGATTATTAAAGA
CCTTCGATGGTGACATTTCGACTACCCAATATATCACAACAATCCAATTA
CCCAAAGTACGCGTTTTAAACGAAAGTCGTAGAGAAACATCACATCGAGG
AAAGAACGTCGTGTTGCCGCCTGCTTATCCCCCTGGTTTTGCCCGAACCT
GCTCTGCTGACCTATTGTTATCGACGATTCATTGCCCCCGCTGTTGCCGC
GGCTTGATCTCCGCAGATGCCCACTGAGGTCACCGCGAGGCACATTCTGG
TCAAGCACAAGGGGTCGAGGCGCCCGGCGTCCTGGCAGGACCCTACCGGG
GCCGCCATCAAGCAGAGGTAAAGAAAACGGCACTGTCGCACGTAAGGTTG
CGATTAGTACCCAGAGAAGATAAAGCGAAGGCTATCAATATGCCGTCCCG
TACATACCCTCCTGTATATCGCGGATTGCACGCGAACGAGGAAGATGCCG
CAGAAGTGAAAAAGTTGGCACACACACCCAGACCGACTTTCAAAACTGGA
TTGCTCCACAACCAGAAGGTTGTGCCAACGCCGAAAGGGGTGGTTCCGGA
AAGATCTCGTTGAGAGCTTTCCGTAGCCGTGTCGATTGCCTTTTCGGAAC
CTCTTGGTTGTGGAGCAATCGATAATCAAAAGTCGGTCCAGGGGGGGTGC
CAACTTGAGCACTTTGGCGGTAGGTGCAGCTCAGGATGGATATACATGCC
AACCACGTTTTGCATTTATTCAAAGTTGACAGGAAGGCCGGGCGCTAGCG
TGTGTTTTTGCGGGACTCTAGGTGGTTCCCCTCCGACAAGGGGGAAAGAC
GCTGCCGCATACATGCGTATCACTACAAACCCAGGGTTTAGGCTGCTTGA
TTCTGTGGTAGTGCCATGTTCGCCTTGTCATACAACGCAGACAAACATTC
ATTTGATGCCTACTACATGACATCTGTTTGTTACGTGGTTTTTTCTGATA
GGACCCAGGCGCAGGCGACGGCCATCCTTCAGGGGCTCCGGCCCGGCATC
AAGGGCCAGGACGACTTCTCCAAGGTCGCCGGTGCGAGGTCGGACTGCTC
CAGCGCCAAACGCGGCGGTGACCTTGGCACTTTCGGCCGTGGAAAAATGC
AGGTGCGAATCCGTTTATAAAAAGACAAAACGTCTTGTCTAATTGGCGTT
TTGTTGCTCTATTTTCTTGCCCTGCAATCTACTTTAACACTATATGGAAC
AACAGCTCTCTAGACTTCGTGCATTTCAAGATGAAGCAGATTATATCTGA
ATCGGAGCGTCTTTTTATTTATGTGCGAGTTGTTTGCTTGTTTGTGGTGG
CAAACCATAAGTGTCAAAAGCATTGCTTGTTGTGACAAAAAAAAAGACGC
TCTTCGCGTGTACGTGCGGCGAAACGCGCATCCAGGGCTCTTGAGCGCAA
AAATCGTTTTCTTAACGATAATTGAAATCGCTTTCTCCAAAAAAAGTCAC
AACATTAAAATTTTCGCGATTATTCAAAGACAAGGTTTTACACGAAACAT
ATTATACTTTGGAGACACAAGCCTCAGAATGCGCAATCGGAAAACAAGCA
CGTGGAAAAAATTTATTGACTCGACGGTCTTTTGAGGAAAAGAGCCGGCT
GAAGGAACGCTTCTTGTGACGAAAATAATAAGGGGAGCTCCGCAGAAGGG
AGGTGGAGGTAGAAAAAGAACCTCCGGGGAGACCCTCGTTCTGTGTGACC
CTCGCGAGTGCTTTCGTGCGGTTTCTTCCATATTCGAGGTGGCGCAGAAA
TGAACGTGAAAACTGATGCCTCTGAACAGATGAGGCTCGCAACACACGTA
AAAAAAGGGCGTTCACGAAGAGGTCTTCGCGATTTTTTCTTTTGAAGCTG
GAAGTGTTTTTCTCGAGGTTTTTGCTCTTCCTTGACAAATGTTTGGTGTC
GTGTGCTGACGTTCGCAACAAGGCGCAGCGGGTGCGAAACGCGGTTGAAT
CATGGAATTTGGTGCAACGTCGGTTTCATGTTTTCGCGGTATGCCCGAAG
CACAGGACCGATTCGATTTGTTGTAAGGGTCTATCCTGCGAGTACACCAT
GTGGCCTGTCCTCCTCCGGTTTGACCCCGGTTGGTGGCATCGCCAATCCA
AACATTACAACAGGAGTATTAGGCTGGCGTTGTCAAGAAGGGGATGGATG
ATCGGGACGGATGGTGACACGATAAGACGTGCCAACATGCTTTGTCGAAT
ATTTTCGCAACACCGTCTCCCTCTCTGAACAACGCTATCGTTACCAGACC
GCTTGGTCGCGTGTGGGATTGACACAGAGCGGGGTCGTTCCATCCCAGTC
AGCCGAGGTGACAGGCATGCATGATATGGTTGCGCTCGAAACCAAGAAAA
ATACAGCCAGATTGGACTAAATTTCATGAAATAGAAAATCGATTTGAATT
GAAATTTTCTTTCGCCTCCCCTCTAATTGCCGTTCGGAGCGCGACGGGGC
TGAGGATTGTACCCCTTTTCTCACCCCCGACACAGCCGCAGCAGGACGAA
CTGGTTGTATTTTGCCTTTTCCGCCAACAGCCCTTTTGCCGCGGGAGGAG
ACAACGAATTTTTTGTCGGGTGGATTTCAGTTGAGGCAAGGCGTTGCGTC
CCCCTGGGCTACCGTTGTGTACATATACCCTCTTTTGTTCGCTTCCACAC
GACGTGCGCTGCCTTCCACCACCGCAAGGTGCGCAGAGAGGCTTTTTTGC
GTCAGAATAAATGGGACGAAAAAAAAATAGAAAAAGAAAGCCGCTCGTGG
TTTTTTGTTGCTCCTGTGATGGAGGCCGGATTTCCACTCGCACACGGTTC
CCGACAAAGAAAACCTGCCGAAGTTGATACATGAGAACGAAATTTTGAAA
CAACGAAGAACGAAAAATCAACGAAAAAAAGCCTTTCTTTTTTTAGTGTG
ATGCTGTCTTCATTTCCTCTCATAAGGCGAGTCTTGGGGAAGTCCCCGCT
GGAGACATGCTAGTTTTTTTCTGTTGGTTGGTTGGTTCTCTCCCGCCAGA
GCAGCGGTGTTGCGTGGTGGGGTTTCGTACGGTTGAGGCGTTTTTATTGC
CTGAAAATGCGAATAAATATGAGTGAGGCGAACACACGGCGCAGACTCGT
TGAGTTGGGTATTCAACCAACCTCTTGTCGACCTGTGCCGCGAAAACGTA
TGGGTGTTAGTAAGGACACGCTTTATAACCCGTATGTGTGTATTCCTAGG
TTTAGAGACCCGATGCGCGGCTAACCCGCAATGGGCATCCCGCGAGCGAT
AGGGCCGGGTGTGAGGTTGATGGGTGATGATTTTATTGGTCTTGGTACGG
GCACACGATGCCGCCATGCATTTGTTCGGGTGTGGCGATGGTGGAGTCGT
CCATCTGTTCCGAAATGACGCAGACCAAGCGAGAAAGCTGAAGCACTTGT
GTAGCCAGTCGTACCTGCTTCTACTCCCACACAACCCCGGATGTCAGGCA
CAACCCAGATTGTACATGGACGTTGAACCCGTCCACGTTGCTTCGCGTGG
TTTTTTATAAATGAAAATCGCGTTGTATGAACGTCCGGTCCACCCTCTTA
TAGTAGGCTGTGCCGCAATCTTCTCCACCCCGCTTTGTGAGGATTGTGTC
TGCTGCGGAGGGGCGGGGGAGTGTCGAGGTGTGTCTTCGAAGGAGGCGCA
GGCTTGGTCTCGAGTTGTCTGGCCCAAAATTCCCACCCCATTCCATCCAT
GGCAATCCATCCATCGATGGCAATCCACTCATTCATAGCACTCCATTCCA
TTCCATCAGTTCCAATCCGGATGGAATCGTTTGGAATGGATGAAATGGAT
TGGAATAAGGATTTTCCTCGAGAAAGTGTTTTATGACGTTGCAAACGTGA
GGGTCAGTCTGAACGTGTTGCAATCGGTTTCCGAGACGAGGCCTCATGCA
CACATGCCCTTCCTGGGCATCCCCCCGAAGGGTAGTCCATATAAGACGCC
GTCAACGATAGGGAAGGTTTGCAAATCCCCTCTGGGTTCAACGGATGATT
GCGACCTCCTCGGGATGTTTGGGGGGTAGAGGCAACCGCCATGACCTTTG
CGGTTTTTGGTTGTATCGTGTACGAATACCCCAAGATTCGTGAGGTCATT
AATCGAACCAGGTTTCCTACAACACTTCGACGGCATGCTCGGAGCGGGGT
CTCTTTCCGGGGAAGGTCAACTGTGTTCGGACTGATTTTTTTACTACAAA
GAAGTGTCACTCGACGAAACTCTGATATCCTTAGCCCTCCTGCTTGGAAG
AGCGCCCCTCAGCTTGCCGGCATGGTACAGTGCTTCCGTCGGTGCTGTGC
GTCAAGCGTGTCTGTCGCTGCCCGCTTCCTCCTCTCCCGTGGGACGTTCA
TCGTGTCCTTCTCCTCAGCGCTTATATTTCCTGACAAGTTTGTTCGTTTT
GGTCCAAAGGATACGGTTCAGGGTGGCGTCATTTCGTCGCTTGTTGATTT
AGATTTACGAAGAAAGGCGCTGACAAGGTCGCGAGACTTGTACCAACCCG
CCCGTGAGATCAACCGCGAATCAAGCCAGGTCCGGAATGACTTCCGTTGT
GTGGTGAAAACCCATGATCCCGTCCGGCAGAAATAAAGCTTATCTCGTTA
TTTTCCTCAAGCTCATGTAAACGGAATCGCGACGCCTATAGCCCCCCTAA
ATGTGGAAAAGTGATGTTGCCAAAAAATATTTCAAGCCAGTGGCTTCTTC
GGTGAATTGCAGCAGCTGCTGGTGCCGGGACAGGGTTTTTGAGACATTCG
GCTTCACGTGCGGGTACTAGTAAAGCACAACATGGAGCACGGCACACGCA
GCTGTGGGAGAAGCGGTTAGAATGATTGCGGACAGGTCTTGGTCCGTCTG
GGTTGCCGCCTCCATTGAGAAGATGGCGAAAGCTTGGGTCGAGAAGAAAT
CGCAGAACCATACCATACCCCACGCACACCCCCTTTTTGAAGTTAGAGTA
TGTAAGATTACAGACGGGTTACGATCGAGGGCTGTTGAACCAACCTGTAT
TGGGAAACAACTTAATACGGGAGGGCTCGCTTGGAGCAAGCAGGAAAGCT
GGTTCAAGGAGAGTACTTGCATCAGAGAACCTGCTGATTCAAATCGCGCG
AAAGACAGACAGACCACCGGAGTAAACAGGCAAGCTGGTCCGAGAAGAGT
ACTTGCATCAGAGCACCTGCTGGTTCGAATCGCGCGAAAGAGAGACAGAC
CACCGGCCGCCACGGCAAGAGCCGTGACAAGAGCGGCAGCAGCAGCAGCA
CAACTACCACCACTATCAAAGGAAGTAGCCAGAAGGTTGCGACGAGCTCA
GTCCTGTACAGAACCGACTGAGAGCGCCGTTACTTGGCTGGAACTCCCGT
GATGAAAGACAGAGCAGCAGACATCTACTAGTGTGGATGTGAGGGTTATA
ACCCGAAACGGCTCGGAGATCATGTATTTTCCTTGCTGCCAATTTTCTGT
GGTTTAGTGTTGGTCTTACCGGCATCTCGTATTGGCGTCGATCTTCCCGC
CGGTGGCGAACAAGTGGCTCAGAGAGTTCCCCCTTTTATTACACCATACT
TTCGCTCACAGCTCCTAGAGCGTCGCGCCTTGCTTCCTATCCTGAAGAGC
TTTGATCCGGGGTCGCGCAGACAAGAACTGCTAACCTACCCTACGGCCCT
ACCACTCTTCCCTTGAGATCACTTATGCGGGGTCGTACAGGAGAACTCTC
ATGTGCTTGCCTCGATTTTTTCGAGCGTTTTGTTTGTTTTGTTTTGTTTT
GTTTTGTTTTGTTTTTTCTCATCTGACTTGAGTGCTCTGTTTGTCTTAAT
AGGAAGACTTGCCTGCGTCAAACGTGTTTCTTTTTTTTCATGTTACAGAT
GACATAAGCACCCCCGGCTACAACAAACATCAGTTGTAAAGCGCGAGTGA
CGGACGGTCAAATTTTTTTTACGCGGTCAACACATTGCATCTATAGCCCA
AAACACCCATCCAAGCAATCAGTTGACGCAAAAATCCCACGTACTCAAAC
CCATTAAGTTTGCCCGCGTGACTCTTCGCACAAGTACATGTCAGTACGCG
TTCATCGCAGCATTTTTTTGCACGACACAGGGACTAACCTTGTGGAACTT
GAAATATTCCATGCGTGTCGGCGGGATGGGATGCGATGTCCGGTTGGGAT
GTTCCGTTTTTGCTGGATATTTCCTGTGAACGAATGTTTCCCAGAATCAA
GACGTCGATTTGCTCAGCATGACCCTGCCAAATCCTAGATGGAGTTTATC
TACACAAGTGTTTGTGATTTTTGATGACTTTTGTTTGTCGCGTGCCAACA
AAAGCTGTCTCGTCACTTTCTTTTTGTGAAGAGAGTTTTGGCCTCGCAAG
GAGTGAACTGTCCTATGGAACGTATGCCGGTATCTGTGTGAGGATCGGTC
TGTGCTAGGATTGGCTAACGTCACAGCGTCAACCGAAACGCGGACGTTTC
CTCGTGGAATGCATCGAGTCCATGAGAGTAACATAGCCGTGCCTAGTAGA
GTAAACATTCTTCAATGACCATCGCGACATGACGCCGATTGAAGTTGCGC
ACTATATATATACCACTAAGCTCATTGAACTGTGGAGGCCGATTAGTTCA
CAACCACAGCTAACTCTCATTCTTCGCGATTGATAGACGCCTCGGCTCGC
ATATCTTCGAAGTCACCGCTAATGTGAACACACTCGCCATTTTCCCTGTG
TTTTTTTGTTCATTTATTCCGCTACCTTGCTCTCTTGTGTTTCGGGGATT
CGTTCGTGGGTGGACGATCAAAAACGGGTGCTTGCCATAATAAAAAAAAA
AATCCGATTCAACATCGATTTTTTTTCTTTCATTTTCCACCATCAATCAT
CATCAGCGCGCGTTTGAAGATGCGGCCTTTGGTCTGCCGGTGGGGGTTTG
AGCGGAGTGGTTTCCACTGACAGCGGCGTTCACCTCATCATGCGCACAGC
A
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Coding sequence (CDS) from alignment at P-lacustris_contig1239:25904..34954+

>mRNA_P-lacustris_contig1239.1740.1 ID=mRNA_P-lacustris_contig1239.1740.1|Name=mRNA_P-lacustris_contig1239.1740.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=858bp|location=Sequence derived from alignment at P-lacustris_contig1239:25904..34954+ (Pleurocladia lacustris SAG_25_93)
ATGCCGGCCATCAGCCCATGCAGCAGCAGCAGCAGCAGCAGAACGGTCGA
CCGGGCATGGGTCCCCCGCAGAACAAAACAGGCGTTCCCTCACCGCAGAA
GCCTTCCCTCCAGATGCCGGCCATCAGCCCATGCAGCAGCAGCAGCAGCA
GCAGAACGGTCGACCGGGCATGGGTCCCCCGCAGAACAAAACAGGCGTTC
CCTCACCGCAGAAGCCTTCCCTCCAGATGCCCACTGAGGTCACCGCGAGG
CACATTCTGGTCAAGCACAAGGGGTCGAGGCGCCCGGCGTCCTGGCAGGA
CCCTACCGGGGCCGCCATCAAGCAGAGATGCCCACTGAGGTCACCGCGAG
GCACATTCTGGTCAAGCACAAGGGGTCGAGGCGCCCGGCGTCCTGGCAGG
ACCCTACCGGGGCCGCCATCAAGCAGAGGACCCAGGCGCAGGCGACGGCC
ATCCTTCAGGGGCTCCGGCCCGGCATCAAGGGCCAGGACGACTTCTCCAA
GGTCGCCGGTGCGAGGTCGGACTGCTCCAGCGCCAAACGCGGCGGTGACC
TTGGCACTTTCGGCCGTGGAAAAATGCAGGACCCAGGCGCAGGCGACGGC
CATCCTTCAGGGGCTCCGGCCCGGCATCAAGGGCCAGGACGACTTCTCCA
AGGTCGCCGGTGCGAGGTCGGACTGCTCCAGCGCCAAACGCGGCGGTGAC
CTTGGCACTTTCGGCCGTGGAAAAATGCAGCGCGCGTTTGAAGATGCGGC
CTTTGGTCTGCCGGTGGGGGTTTGAGCGGAGTGGTTTCCACTGACGCGCG
TTTGAAGATGCGGCCTTTGGTCTGCCGGTGGGGGTTTGAGCGGAGTGGTT
TCCACTGA
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