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Homology
BLAST of mRNA_P-lacustris_contig1229.1697.1 vs. uniprot
Match: D8LE72_ECTSI (FHA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE72_ECTSI) HSP 1 Score: 356 bits (914), Expect = 1.380e-106 Identity = 226/308 (73.38%), Postives = 242/308 (78.57%), Query Frame = 1
Query: 1 SATTAASTVVLPTSPLAQPKQHERATAKDDGAPLPXXXXXXXXXXXXXXXXXXXXXXXSSYKPPSWGLTEAPNASGLSLTVLKGGVEVISISLDNRTHFCWVSRQQGVVDVLLEHPSISRKHAILSMGRMVCALFLFDNGSTHGCMVNKEKIPSKEFHRLHVGDVIKFGESTRLYALEGPDELKPAEYESENLRNLRLDAGRKQLVAKLAKLKADAAGXXXXXXXXXXXEYGISWGFDEDAIDEEXXXXXXXXXXXX--VELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDNKLFEKLQLKLNKVEHL 918
SA TA ST + + PL + +Q AKD A LP YKPPSWGLTEAP ASGLSLTVLKGGVEV SISLDNRTH + RQQGVVDVLLEHPSISRKHAIL G+ ALFLFDNGSTHGC VNK+KIP KEFHRLHVGDVIKFGESTRLYALEGP+EL+PAEYES+NLRNLRLDAGRKQL AKLAK+KA AG XXXXXXXX EYGISWGFDEDA+ EEXXXXXXXXXXXX VELPDYLKTEAQKRRRRDTK+GLTED+VHKRD KLFEKLQLKL K+E +
Sbjct: 28 SAATAGSTAAV-SPPLDKAQQSALDPAKDGSASLPPPPPKTAGSLNGDGVKAVAS---GGYKPPSWGLTEAPGASGLSLTVLKGGVEVGSISLDNRTHVL-LGRQQGVVDVLLEHPSISRKHAILQHGQNG-ALFLFDNGSTHGCSVNKKKIPPKEFHRLHVGDVIKFGESTRLYALEGPEELRPAEYESDNLRNLRLDAGRKQLAAKLAKIKAGGAGEXXXXXXXXSGEYGISWGFDEDAVAEEXXXXXXXXXXXXXXVELPDYLKTEAQKRRRRDTKIGLTEDNVHKRDAKLFEKLQLKLTKIEEI 329
BLAST of mRNA_P-lacustris_contig1229.1697.1 vs. uniprot
Match: A0A836CFG3_9STRA (FHA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFG3_9STRA) HSP 1 Score: 230 bits (587), Expect = 5.720e-60 Identity = 150/340 (44.12%), Postives = 195/340 (57.35%), Query Frame = 1
Query: 175 SSYKPPSWGLTEAPNASGLSLTVLKGGVEVISISLDNRTHFCWVSRQQGVVDVLLEHPSISRKHAILSMGRMVCALFLFDNGSTHGCMVNKEKIPSKEFHRLHVGDVIKFGESTRLYALEGPDELKPAEYESENLRNLRLDAGRKQLV--------AKLAKLKADAAGXXXXXXXXXXXEYGISWGFDEDAIDEEXXXXXXXXXXXXVELPDYLKTEAQKRRRRDTK--------------------------VGLTEDSVHKRDNKLFEKLQLKLNKVEHLLTENERITAKEGGQGGLTEGQQAQLARNDKAITAIRLQIEEIEETIRSKNKARERSKE 1092
S Y P W P + L VLK G V ++L ++++ + RQ G VD+ L+HPSISR+HA+L G +L + D GSTHG VNK+++ K++ +L+VGDVIKFGESTRLY L GP EL P EY+SENL+ RL K+LV K+ K +ADA + G SWGFDEDA+ E +LP+YLKTEAQK RR++ K VGL E+ V+ +D K F+ LQ KL K+E+L TENERITAKEG Q GLT GQQAQ+ RN + + A+R Q+E IEE IR KNK R +K+
Sbjct: 3 SDYVEPEW--ASRPRKD-MELEVLKSGTVVDKLALHEKSYYT-LGRQAGAVDIQLDHPSISRQHAVLQYGHAEGSLHVVDRGSTHGTFVNKQRLEPKKYVKLNVGDVIKFGESTRLYVLCGPAELMPPEYDSENLQKYRL----KKLVNSKLAEAGVKVGKDEADAQ-----------QDTGASWGFDEDAV-ESDSGEGSDSEEDEEQLPEYLKTEAQKARRKELKSSITCQDRXXXXXXXXXXXXXXXXXXVGLKEEDVNAKDQKAFQNLQKKLQKIENLHTENERITAKEGSQSGLTPGQQAQVDRNMQRLAALREQVESIEEAIRQKNKQRTGAKQ 322
BLAST of mRNA_P-lacustris_contig1229.1697.1 vs. uniprot
Match: M4B2V9_HYAAE (FHA domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2V9_HYAAE) HSP 1 Score: 194 bits (493), Expect = 3.870e-49 Identity = 124/310 (40.00%), Postives = 176/310 (56.77%), Query Frame = 1
Query: 181 YKPPSWGLTEAPNASGLSLTVLKGGVEVISISLDNRT--HFCWVSRQQGVVDVLLEHPSISRKHAILSMGRMVCALFLFDNGSTHGCMVNKEKIPSKEFHRLHVGDVIKFGESTRLYALEGPDELKPAEYESENLRNLRLDAGRKQLVAKLAKLKADAAGXXXXXXXXXXXEYGISWGFDEDAIDEEXXXXXXXXXXXXVE--LPDYLKTEAQKRRRRD----TKVGLTEDSVHKRDNKLFEKLQLKLNKVEHLLTENERITAKEGGQGGLTEGQQAQLARNDKAITAIRLQIEEIEETIRSKNKARERS 1086
Y PP W T N LSL V+K GV V + LD + + ++ R + V DV + HPSISR HA+L ALFL+D STHGC VNK ++ +++F RLH+GDV+ FGESTRLY + GP EL P EYES NL LR G+K+ + + +K E G+SWGF EDA DEE LPDYL ++++ D + VG ++ +H++D +L+++LQ ++ K+E+L E RI AK+ GL+EGQQ L RN++ I A+ +I+ +E I +KN R +S
Sbjct: 4 YSPPDWSTT-GRNVFTLSLEVIKSGVTVDRLPLDQKDGRSYVFIGRMETVCDVAVAHPSISRVHAVLQFDEQG-ALFLYDTRSTHGCYVNKRRVSAEDFVRLHIGDVLVFGESTRLYVVCGPAELLPPEYESSNLTKLREKLGKKRSLQEDSK---------------QLEERGVSWGFGEDAEDEEEGESDEEMDAAKTREALPDYLCNVRRRKKEDDQPYTSSVGPSQ--IHEKDQRLYQQLQTRIRKMENLKLERSRILAKQNQLNGLSEGQQNTLDRNEQRIDALMKEIDNLEGRIHAKNDQRTQS 294
BLAST of mRNA_P-lacustris_contig1229.1697.1 vs. uniprot
Match: A0A329RQU1_9STRA (FHA domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RQU1_9STRA) HSP 1 Score: 191 bits (485), Expect = 3.850e-48 Identity = 125/304 (41.12%), Postives = 176/304 (57.89%), Query Frame = 1
Query: 175 SSYKPPSWGLTEAPNASGLSLTVLKGGVEVISISL---DNRTHFCWVSRQQGVVDVLLEHPSISRKHAILSMGRMVCALFLFDNGSTHGCMVNKEKIPSKEFHRLHVGDVIKFGESTRLYALEGPDELKPAEYESENLRNLRLDAGRKQLVAKLAKLKADAAGXXXXXXXXXXXEYGISWGFDEDAIDEEXXXXXXXXXXXXVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDNKLFEKLQLKLNKVEHLLTENERITAKEGGQGGLTEGQQAQLARNDKAITAIRLQIEEIEETIRSKNKAR 1077
+ Y PP WG + N G+ L V+KGGV V ++ L D R++ R + V D+ L HPSISR HA L ALFL+D STHGC VNK+++ + EF RLH+GDV+ FGESTRLYA+ GP EL PAEYES NL R +K+ ++K + E G SWGF EDA +E+ XX ELPDYL+ ++ + K +++ V ++D KL+++LQ ++ K+E+L E RI AK+ GL+EGQQ L RN++ I A+ +I+++E I +KN R
Sbjct: 2 AQYSPPEWG-SSGRNEFGIYLEVIKGGVVVETLELPRNDGRSYVL-AGRMETVCDLALAHPSISRTHAALQFDEQG-ALFLYDIHSTHGCFVNKKRVLADEFVRLHIGDVLGFGESTRLYAICGPPELLPAEYESLNLAKFRKKLAKKREISKEKQ-----------------EERGASWGFGEDA-EEDESAXXDDSVKGKEELPDYLRN-LKEEEDQPYKSSVSQSQVSEKDRKLYQQLQTRIRKMENLKLEKSRILAKQNQLDGLSEGQQRTLERNEQRIEALLKEIDDLEGRIHAKNDQR 283
BLAST of mRNA_P-lacustris_contig1229.1697.1 vs. uniprot
Match: G4ZWG5_PHYSP (FHA domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZWG5_PHYSP) HSP 1 Score: 187 bits (476), Expect = 8.330e-48 Identity = 128/313 (40.89%), Postives = 181/313 (57.83%), Query Frame = 1
Query: 175 SSYKPPSWGLTEAPNASGLSLTVLKGGVEVISISL---DNRTHFCWVSRQQGVVDVLLEHPSISRKHAILSMGRMVCALFLFDNGSTHGCMVNKEKIPSKEFHRLHVGDVIKFGESTRLYALEGPDELKPAEYESENLRNLRLDAGRKQLVAKLAKLKADAAGXXXXXXXXXXXEYGISWGFDEDAIDEEXXXXXXXXXXXX--VELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDNKLFEKLQLKLNKVEHLLTENERITAKEGGQGGLTEGQQAQLARNDKAITAIRLQIEEIEETIRSKNKARERSKEGG 1098
+ Y PP W + N G+ L V+KGGV V ++ L D R++ R + V D+ L HPSISR HA L ALFLFD STHGC VNK+++ +++F RLH+GDV+ FGESTRLYA+ GP EL PAEYES NL R RK+ + L K K + + G SWGF EDA +EE ELPDYL+ ++ + K +++ V+++D +L+++LQ ++ K+E+L E RI AK+ GL+EGQQ L RN++ I A+ +I+++E I +KN +RSK GG
Sbjct: 2 AQYTPPEWSAS-GRNEFGIYLEVIKGGVVVDTLPLPRTDGRSYVV-AGRMKTVCDLPLAHPSISRVHAALQFDDKG-ALFLFDARSTHGCFVNKKRVVAEQFVRLHIGDVLVFGESTRLYAVCGPPELLPAEYESLNLAKFREKLDRKRQI--LEKKKQE--------------DRGASWGFGEDAQEEEGDDESDEEDAAKGKEELPDYLRN-LKEEEDQPYKSSVSQSQVNEKDQRLYQQLQTRIRKMENLKLERSRILAKQNQLDGLSEGQQRTLDRNEQRIDALMKEIDDLEGRIHAKND--QRSKTGG 292
BLAST of mRNA_P-lacustris_contig1229.1697.1 vs. uniprot
Match: A0A662Y374_9STRA (FHA domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y374_9STRA) HSP 1 Score: 187 bits (475), Expect = 8.630e-47 Identity = 131/308 (42.53%), Postives = 177/308 (57.47%), Query Frame = 1
Query: 181 YKPPSWGLTEAPNASGLSLTVLKGGV--EVISISLDNRTHFCWVSRQQGVVDVLLEHPSISRKHAILSMGRMVCALFLFDNGSTHGCMVNKEKIPSKEFHRLHVGDVIKFGESTRLYALEGPDELKPAEYESENLRNLRLDAGRKQLVAKLAKLKADAAGXXXXXXXXXXXEYGISWGFDEDA-------IDEEXXXXXXXXXXXXVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDNKLFEKLQLKLNKVEHLLTENERITAKEGGQGGLTEGQQAQLARNDKAITAIRLQIEEIEETIRSKNKAR 1077
Y+PP WGL NA G+SL V+K GV E ++++L R + D+ L HPSISR HA L ALFL D STHGC VNK+++ S EF RLH+GDV+ FGES+RLYA+ GP EL PAEYES NL R A +K+ V + K++ D G SWGF EDA XXXXXX ELPDYL+ K + K +++ ++++D +LF++LQ ++ K+E+L E RI AK+ GLTEGQQ QL RN++ I A+ +I+++E I +KN R
Sbjct: 4 YEPPEWGLA-GRNAFGISLEVVKRGVLVETLALALSPAKSCVVAGRMAPLCDLELAHPSISRVHAALQFDAHG-ALFLCDLHSTHGCFVNKKRVASDEFVRLHIGDVLGFGESSRLYAVCGPPELLPAEYESSNLSRFRDKAEKKRAVREEQKMERDR---------------GASWGFGEDAEXXXXXXXXXXXXXXXXDAAAGKEELPDYLRN--LKEDEQPYKSSVSQSELNEKDQRLFQQLQTRIRKMENLKVERSRILAKQHQLDGLTEGQQRQLDRNEQRIDALMKEIDKVEAQIHAKNAQR 292
BLAST of mRNA_P-lacustris_contig1229.1697.1 vs. uniprot
Match: D0N5R2_PHYIT (FHA domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N5R2_PHYIT) HSP 1 Score: 184 bits (467), Expect = 1.200e-46 Identity = 132/303 (43.56%), Postives = 177/303 (58.42%), Query Frame = 1
Query: 175 SSYKPPSWGLTEAPNASGLSLTVLKGG--VEVISISLDNRTHFCWVSRQQGVVDVLLEHPSISRKHAILSMGRMVCALFLFDNGSTHGCMVNKEKIPSKEFHRLHVGDVIKFGESTRLYALEGPDELKPAEYESENLRNLRLDAGRKQLVAKLAKLKADAAGXXXXXXXXXXXEYGISWGFDEDAIDEEXXXXXXXXXXXXVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDNKLFEKLQLKLNKVEHLLTENERITAKEGGQGGLTEGQQAQLARNDKAITAIRLQIEEIEETIRSKNKAR 1077
+ Y PP WG N G+ L V+KGG VE++ + + + + R + V D+ L HPSISR HA L ALFL+D STHGC VNK+++ + + RLH+GDV+ FGESTRLYA+ GP EL PAEYES NL R KL K XXXXXXE G SWGF EDA +EEXXXXX ELPDYL+ K + + +++ V+++D KL+++LQ ++ K+E+L E RI AK+ GL+EGQQ L RND+ I A+ +I+ +E I +KN R
Sbjct: 2 AQYSPPKWG-ESGRNEFGIFLEVIKGGMVVEILQLPRSDGSSYVVAGRMETVCDLALAHPSISRTHAALQFDEQG-ALFLYDIHSTHGCFVNKKRVQADVYVRLHIGDVLGFGESTRLYAVCGPPELLPAEYESLNLAKFR---------EKLEK-----------KXXXXXXENGASWGFGEDA-EEEXXXXXDEPAKDQAELPDYLRN--LKEEDQPYRSSVSQSQVNEKDQKLYQQLQTRIRKMENLKLEKSRILAKQNQLEGLSEGQQRTLERNDQRIEALVKEIDGLEARIHAKNDQR 279
BLAST of mRNA_P-lacustris_contig1229.1697.1 vs. uniprot
Match: A0A3M6VB83_9STRA (FHA domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB83_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.490e-46 Identity = 124/311 (39.87%), Postives = 182/311 (58.52%), Query Frame = 1
Query: 175 SSYKPPSWGLTEAPNASGLSLTVLKGGV--EVISISLDNRTHFCWVSRQQGVVDVLLEHPSISRKHAILSMGRMVCALFLFDNGSTHGCMVNKEKIPSKEFHRLHVGDVIKFGESTRLYALEGPDELKPAEYESENLRNLRLDAGRKQLVAKLAKLKADAAGXXXXXXXXXXXEYGISWGFDEDAIDEEXXXXXXXXXXXXVE-LPDYLKTEAQKRRRRDTKVGLTEDSVHKRDNKLFEKLQLKLNKVEHLLTENERITAKEGGQGGLTEGQQAQLARNDKAITAIRLQIEEIEETIRSKNKARERSKEGG 1098
+ Y PP W T+ N G+ L ++KGG+ E +S N + V R + V D+ L HPS+SR HA L ALFL+D STHGC VNK+++ ++E+ +LH+GDV+ FGESTRLYA+ GP EL PAEYES NL R +K+ + K + D G SWGF EDA +EE XXXX E LPDYL+ K + K +++ ++++D++L+++LQ ++ K+E++ E RI AK+ GL+EGQQ LARN++ I + +I+++E I +KN +R+K GG
Sbjct: 2 AQYLPPEWS-TKGRNVFGIYLEIIKGGIVIEQFQLSRSNGYSYIVVGRMENVCDLHLAHPSVSRIHAALQFDEKG-ALFLYDIHSTHGCYVNKKRVVAEEYVQLHIGDVLVFGESTRLYAVCGPPELLPAEYESLNLVKFREKLDKKREIQDQKKQQEDR---------------GASWGFQEDAEEEEGEXXXXEDGAKCKEKLPDYLQN--LKEDDQPYKSSVSQSQINEKDHRLYQQLQTRIRKMENIKLETSRILAKQNQLEGLSEGQQNTLARNEQRIDTLMKEIDDLEGRIHAKND--QRTKTGG 291
BLAST of mRNA_P-lacustris_contig1229.1697.1 vs. uniprot
Match: A0A7S2RXC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXC8_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.680e-46 Identity = 126/316 (39.87%), Postives = 171/316 (54.11%), Query Frame = 1
Query: 181 YKPPSWGLTEAPN--------ASGLSLTVLKGGVEVISISLDNRTHFCWVSRQQGVVDVLLEHPSISRKHAILSMGRMVCALFLFDNGSTHGCMVNKEKIPSKEFHRLHVGDVIKFGESTRLYALEGPDELKPAEYESENLRNLR--LDAGRKQLVAKLAKLKADAAGXXXXXXXXXXXEY---GISWGFDEDAIDEEXXXXXXXXXXXXVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDNKLFEKLQLKLNKVEHLLTENERITAKEGGQGGLTEGQQAQLARNDKAITAIRLQIEEIEETIRSKNKARERSK 1089
Y P W PN A+ S +LK G+ + ++L ++ + V R V D++LEHPSISR HA+L R L+L+D STHG VNK K+ F +L GDV+ FGESTRLY L GP++ +P E ESENLR +R L+ R++ AKLA A E GISWG + D+E ELPDYLK + Q+ + T +G E H RD KL+ KL K+ K L EN +I +KEGG GL++GQ+A + RND+ I ++ ++E +EE IRSKN RE +K
Sbjct: 60 YSSPDWAAQVPPNEAATPEDEATPWSFEILKNGMPLSILALGDKAKYV-VGRAGDVSDIVLEHPSISRAHAVLQFNRNG-TLWLYDLNSTHGTRVNKRKVSGGAFEQLRPGDVVSFGESTRLYLLNGPEQQRPPEMESENLRKMREKLNNRRERREAKLAAAMTSDAQALAQVMQEKNKEVERDGISWGMQDAPEDDEEGAEMNEE-----ELPDYLKGKEQRYKEHATSLGQGE--FHSRDEKLWSKLHQKVGKANRLQEENRKILSKEGGHTGLSDGQRAHVVRNDERIAQLQEEVEALEEQIRSKNTQREETK 366
BLAST of mRNA_P-lacustris_contig1229.1697.1 vs. uniprot
Match: A0A2P4Y619_9STRA (FHA domain-containing protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y619_9STRA) HSP 1 Score: 183 bits (464), Expect = 3.580e-46 Identity = 121/310 (39.03%), Postives = 173/310 (55.81%), Query Frame = 1
Query: 175 SSYKPPSWGLTEAPNASGLSLTVLKGGVEVISISLDNRTHFCWV--SRQQGVVDVLLEHPSISRKHAILSMGRMVCALFLFDNGSTHGCMVNKEKIPSKEFHRLHVGDVIKFGESTRLYALEGPDELKPAEYESENLRNLRLDAGRKQLVAKLAKLKADAAGXXXXXXXXXXXEYGISWGFDEDAIDEEXXXXXXXXXXXXVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDNKLFEKLQLKLNKVEHLLTENERITAKEGGQGGLTEGQQAQLARNDKAITAIRLQIEEIEETIRSKNKARERSKEGG 1098
+ Y PP W T N G+ L V+K GV V + L R +V R + V D+ L HPSISR HA L ALFL+D STHGC +NK+++ ++EF RLH+GDV+ FGESTRLYA+ GP EL PAEYES NL R +K+ + + K + E G SWGF EDA E +LPDYL+ + + K +++ V ++D +L+++LQ ++ K+E+L E RI AK+ GL+EGQQ L RN++ + A+ +I+++E I +KN +R+K GG
Sbjct: 2 AQYSPPEWSTT-GRNVFGIYLEVIKSGVVVDKLQLPIRDGRSYVVAGRMETVCDLALAHPSISRVHAALQFDEQG-ALFLYDICSTHGCFINKKRVLAEEFVRLHIGDVLVFGESTRLYAVCGPPELLPAEYESLNLAKFREKLEKKREIREKKKEEI---------------EQGASWGFGEDA---EESDEEDEIVENKEDLPDYLRNVKEDQ---PYKSSVSQSDVKEKDQRLYQQLQTRIRKMENLKLETSRILAKQNQLDGLSEGQQRTLERNEQRVDALMKEIDDLEGRIHAKND--QRTKTGG 286
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 359.4 |
| Seed ortholog evalue | 2e-96 |
| Seed eggNOG ortholog | 2880.D8LE72 |
| Preferred name | SLC4A1AP |
| KEGG ko | ko:K06091,ko:K08956 |
| KEGG Pathway | ko04390,ko04391,ko04530,ko05165,map04390,map04391,map04530,map05165 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005886,GO:0016020,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070013,GO:0071944,GO:0097159,GO:1901363 |
| EggNOG free text desc. | Solute carrier family 4 (anion exchanger), member 1, adaptor protein |
| EggNOG OGs | KOG1881@1,KOG1881@2759 |
| Ec32 ortholog description | Forkhead-associated (FHA) domain |
| Ec32 ortholog | Ec-00_001160.1 |
| COG Functional cat. | A |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01002,ko03110 |
| Exons | 11 |
| Model size | 2585 |
| Cds size | 1095 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815545.2611032-UTR-P-lacustris_contig1229:39687..39773 | 1622815545.2611032-UTR-P-lacustris_contig1229:39687..39773 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1229 39688..39773 - |
| 1693493601.8629491-UTR-P-lacustris_contig1229:39687..39773 | 1693493601.8629491-UTR-P-lacustris_contig1229:39687..39773 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1229 39688..39773 - |
| 1622815545.2718885-UTR-P-lacustris_contig1229:42350..43634 | 1622815545.2718885-UTR-P-lacustris_contig1229:42350..43634 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1229 42351..43634 - |
| 1693493601.8759437-UTR-P-lacustris_contig1229:42350..43634 | 1693493601.8759437-UTR-P-lacustris_contig1229:42350..43634 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1229 42351..43634 - |
| 1622815545.4012024-UTR-P-lacustris_contig1229:49729..49849 | 1622815545.4012024-UTR-P-lacustris_contig1229:49729..49849 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1229 49730..49849 - |
| 1693493601.9987214-UTR-P-lacustris_contig1229:49729..49849 | 1693493601.9987214-UTR-P-lacustris_contig1229:49729..49849 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1229 49730..49849 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815545.2816367-CDS-P-lacustris_contig1229:43634..43667 | 1622815545.2816367-CDS-P-lacustris_contig1229:43634..43667 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 43635..43667 - |
| 1693493601.8844843-CDS-P-lacustris_contig1229:43634..43667 | 1693493601.8844843-CDS-P-lacustris_contig1229:43634..43667 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 43635..43667 - |
| 1622815545.2911413-CDS-P-lacustris_contig1229:44380..44530 | 1622815545.2911413-CDS-P-lacustris_contig1229:44380..44530 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 44381..44530 - |
| 1693493601.8961098-CDS-P-lacustris_contig1229:44380..44530 | 1693493601.8961098-CDS-P-lacustris_contig1229:44380..44530 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 44381..44530 - |
| 1622815545.3020277-CDS-P-lacustris_contig1229:45318..45444 | 1622815545.3020277-CDS-P-lacustris_contig1229:45318..45444 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 45319..45444 - |
| 1693493601.9108217-CDS-P-lacustris_contig1229:45318..45444 | 1693493601.9108217-CDS-P-lacustris_contig1229:45318..45444 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 45319..45444 - |
| 1622815545.3123019-CDS-P-lacustris_contig1229:45765..45841 | 1622815545.3123019-CDS-P-lacustris_contig1229:45765..45841 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 45766..45841 - |
| 1693493601.921728-CDS-P-lacustris_contig1229:45765..45841 | 1693493601.921728-CDS-P-lacustris_contig1229:45765..45841 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 45766..45841 - |
| 1622815545.3235343-CDS-P-lacustris_contig1229:46296..46355 | 1622815545.3235343-CDS-P-lacustris_contig1229:46296..46355 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 46297..46355 - |
| 1693493601.9307323-CDS-P-lacustris_contig1229:46296..46355 | 1693493601.9307323-CDS-P-lacustris_contig1229:46296..46355 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 46297..46355 - |
| 1622815545.335671-CDS-P-lacustris_contig1229:46785..46977 | 1622815545.335671-CDS-P-lacustris_contig1229:46785..46977 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 46786..46977 - |
| 1693493601.9389372-CDS-P-lacustris_contig1229:46785..46977 | 1693493601.9389372-CDS-P-lacustris_contig1229:46785..46977 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 46786..46977 - |
| 1622815545.3469782-CDS-P-lacustris_contig1229:47366..47480 | 1622815545.3469782-CDS-P-lacustris_contig1229:47366..47480 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 47367..47480 - |
| 1693493601.9551666-CDS-P-lacustris_contig1229:47366..47480 | 1693493601.9551666-CDS-P-lacustris_contig1229:47366..47480 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 47367..47480 - |
| 1622815545.357664-CDS-P-lacustris_contig1229:48113..48184 | 1622815545.357664-CDS-P-lacustris_contig1229:48113..48184 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 48114..48184 - |
| 1693493601.9665978-CDS-P-lacustris_contig1229:48113..48184 | 1693493601.9665978-CDS-P-lacustris_contig1229:48113..48184 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 48114..48184 - |
| 1622815545.3734572-CDS-P-lacustris_contig1229:48620..48707 | 1622815545.3734572-CDS-P-lacustris_contig1229:48620..48707 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 48621..48707 - |
| 1693493601.9764414-CDS-P-lacustris_contig1229:48620..48707 | 1693493601.9764414-CDS-P-lacustris_contig1229:48620..48707 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 48621..48707 - |
| 1622815545.3882506-CDS-P-lacustris_contig1229:49542..49729 | 1622815545.3882506-CDS-P-lacustris_contig1229:49542..49729 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 49543..49729 - |
| 1693493601.9868424-CDS-P-lacustris_contig1229:49542..49729 | 1693493601.9868424-CDS-P-lacustris_contig1229:49542..49729 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1229 49543..49729 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1229.1697.1 >prot_P-lacustris_contig1229.1697.1 ID=prot_P-lacustris_contig1229.1697.1|Name=mRNA_P-lacustris_contig1229.1697.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=365bp
MVGGLAGGGSKRQTAASASSYKPPSWGLTEAPNASGLSLTVLKGGVEVIS ISLDNRTHFCWVSRQQGVVDVLLEHPSISRKHAILSMGRMVCALFLFDNG STHGCMVNKEKIPSKEFHRLHVGDVIKFGESTRLYALEGPDELKPAEYES ENLRNLRLDAGRKQLVAKLAKLKADAAGEGGRGGGGDSGEYGISWGFDED AIDEEEDEDEDGEGEGEVELPDYLKTEAQKRRRRDTKVGLTEDSVHKRDN KLFEKLQLKLNKVEHLLTENERITAKEGGQGGLTEGQQAQLARNDKAITA IRLQIEEIEETIRSKNKARERSKEGGDENNHNHGGGRGGGSRRVRGRGGR LLRPNCSDSAGLLK* back to topmRNA from alignment at P-lacustris_contig1229:39688..49849- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig1229.1697.1 ID=mRNA_P-lacustris_contig1229.1697.1|Name=mRNA_P-lacustris_contig1229.1697.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10162bp|location=Sequence derived from alignment at P-lacustris_contig1229:39688..49849- (Pleurocladia lacustris SAG_25_93) TCCGCGACAACAGCAGCATCAACCGTCGTGCTTCCAACTTCACCTCTAGC
ACAGCCGAAGCAACACGAGCGAGCCACGGCCAAGGATGATGGCGCACCCC
TCCCCCCACCTCCGCCAAAGATGGTTGGTGGTCTGGCTGGCGGCGGCTCG
AAGAGACAGACGGCAGCGTCAGCTAGCAGCTACAAGCCTCCAAGCTGGGG
ATTGACGGAAGCACCGAATGCCTCTGGGCTGTCGTTGACCGTGCTCAAGG
GCGGTGTCGAGGTCATCAGCATTTCTCTGGACAACCGCACACATTTTTGC
TGGGTGAGTTTAATCTTTCCTACGTTCGCTACTGTATGTTGTTATTGTGT
TGGCCGCCAGAAAGCACATGGTGCTGTATACATGCAGCTTATGCACACAC
AACCTATCGTCAATTTTTCGATATCTTTGCTTGCTACTGCTGTACCTCTC
TACGCTGGTGTGCCTGCTCGGTACGCCTCTGACTTTAACCTTTGAACCTC
ACCTTACTAATACTAGTATATTTTGTTGGTTGTGGACGTTGACAGCCACT
GGAGGCCTCACTCTCCCACTCTCTCTCACGACGTATCCTAATATGCTACG
ATGCTACACTGGCATTGTCATATGCATACCTCGTAAATAGAGGTGGATCG
GTGCACAATAGGTGCCCCTCTTGCAGGTACACGTTATAATTCTTATTCTC
AAGATACAGGTGCTCTCTTTCGTTGTCTCCATCCAAACGCCATCTTCAAG
ATCGATCGGTGTGCTGAAGCAGCAATTATGTCTCCGCAAGCTGCCAGCTG
CCAGCCCTCTGGAGCGGATGGGTCTTTCAGGGACAGAAAATCATTTGATT
TTTGCTTTACTGTGCTGTCGGTGTCCAATCGTATCGACTGAATCGACTGA
AACCGTCAAATCGACGGCGTACGTCGCGTCTCTCTCGTCCATTTCAATCG
ATGCGATTCGATTCGATCAATTGATTCCGTTCGAAGTCAAGTCGGACTAA
ATAGCTTTTTCAAACTGCCGTATGTACCCGCCTCGACCCAAGGAAGCAAG
GAGGCGATTTCCGCTTTGGTGATGGGTTCCAAGTCCTAAGTTGCCCGCGT
TACTTTATTGTATTTTGTTGACTCCACCTTCCATGACTGCAGGCAGGCAG
CAGGGCGTTGTGGACGTGTTGCTGGAACACCCATCCATCTCGAGGAAGCA
TGCCATTCTCAGCATGGGCAGAATGGTGTGTATGCGAGAAAGAGGAACAA
AGTAGCTTTTGAGCTTTCAGTAATGCCTAGAACCACCTGTTGATGGTATG
CGTCCAGACGATATTGAGGCAGTGTTGGCATTAGTACACTACCAATACCA
GCAGGGGTGGTAGCTTTGTGGCCTAATGTTTCTGACTTCTCTAGTCCAGT
TGATTTTCCGTTCGGCGATGGTGATTTTACCTGGGGCTTACGGGGCTGCA
CCTCACCTTGCCAGCTGGAGTATTATTTTAATTTGGGTATGGCGATGAGC
CGTTTCTTGTCTTTCCCGGCCGTTTCTTGTCTTTCTTCGGCTGCATCTTT
ATTTTATTTGCTACGCAAGCAGCAACGTGTCCGCCTATCCACCATGCACC
GATCATCCGTTGCCTAATTGCTGCCTGGCTGCCATCCACCATCCACATGC
CGTACGTATGGCAAGGTGCTCTATTTCTTTTCGACAATGGAAGCACGCAC
GGCTGCATGGTTAACAAGGAAAAAATCCCGTCTAAGGCGAGACCATGGCA
AGGCCAGGGAGGGCAATTTACAATCTGTGGTTTTATGCAATGGTTGCCAA
GGGGCAGGTGTTGAGTTGGTTTGCGTGTGTCATGCATGTCGAAACTCTCA
TTGTTTTTGCCGCAGCAGTTTCCGCATACAACGGGTAGGGTCAGTCAAGC
GTCGCAAGCTGTACAAGAGAATTTAGCAGCATCAGTGCACGTCCACGTCC
ACGTTCATGTCACATTCTGATGTCATACATGTGTCACTGTTTGTTTCTTT
GGGGCGTTGCCGGCAATCAACTTTTCTCATTTTCTACTGTACTGCTGTAC
CCGCACTCACCTTGTTGTTGGATCTACATGTGGTCAGTGGCAATTAGTGT
TAATAGTGTCACATGACGACTGGAGCGGACTCCCTCTCTCCTTCCCTTGC
CGTGCGTACAACTCATTCACTCATTCTCATTCTGCCCAGATCATCCTGTC
GCGTGTTCGTGCTGTTGTATGTTTTCCAAGATCGAGTTGCCTTTCCTATT
TGGATCTTGACCTTCGAGTGAATCAGTTCCTCGTCATTTTCACCCTCTTC
ACTGTCGGGGAGGGTATTCTGACTGCCCAGAACCGACAATAGACACACAC
CATTTTTTATTACACGCAGGAGTTCCATCGACTCCACGTGGGCGACGTGA
TCAAGTTCGGAGAATCTACACGGCTGTACGCCCTGGAAGGTCCGGACGAG
CTAAAGCCTGCGGAATACGAAAGCGAAAATCTCGTGAGTCCTATTTTGTT
GTTATGGTGGCTTTGCCATTACCTCATAGCCTCCAGAGAAGGGTCCCTCA
CATGTGTGGTGTAATCGATTGCCCGGTATCAACGTATCAAATTGATTGCA
GCCCAAGCGAACGGGGTGACCGTGGAAGACGATACGCGATTAACCCACTG
TAGCGCGACCACTGCAGGAGAAAACAAAGGGAATTACTGCAGGCAGGCTG
AGATGGCCGTCCTTTTTCCCGGAGCAGACACGAAGCAGACCAAAAAGAGA
TGCACGAAGGATAGCCTAGCCTTGTTCGCTACTTGGACGATATTGGCGCT
ACCGGAAGCTATCTTATCTCCAACTTCGACCTCCCTCCGCCCTCTGCCCA
CTCAAACATTTTTTGGTCGTAGCGCAACTTGCGCCTCGACGCTGGACGGA
AGCAGCTGGTCGCGAAGCTGGCGAAGCTTAAGGCAGACGCCGCGGGAGAG
GGGGGCAGGGGTGGTGGGGGGGACAGCGGGGAGTACGGCATCAGCTGGGG
TTTCGACGAGGACGCGATCGACGAGGAGGAAGACGAGGACGAGGACGGGG
AGGGGGAGGGGGAGGTGAGCGAGCTTGGTGTAACCGTCATTTGTTTTGAA
GCCAAAGGGCTTGTTGTTGTCGTTGTTGTTGTCGTTGTTGTTGTCGTTGT
TGTTGTCGTAACTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCTTGAGCCTAACCTA
ACCAACAGGGTTGTTTCGCTGTCACGGGGTGCCTCGCTGGAGGTATTCGA
AGGCCATCCTCGGGACATGCGTGTCATTGACCTCAGACGCCGATAAAGAT
GCCCCCACACCATTTTCAGTATTTTTCGCTTTGCGCACGAATGATACACC
CCATATGTACACAATCTCGCACTGTACATGTACATGTGTACGGGCGTGCC
TCACGACTTGGATAACATGGGTACGCTACACCTGTCGGGATCAGGTGGAG
CTCCCTGACTACCTCAAGACGGAAGCCCAAAAGCGGAGAAGGCGCGACAC
AAAGTGAGTAACGAAAAACGTTACCGAAATCCTTAACAATCGTACCGTAG
AGGAGTGGTGTAAGGTGGTAAGGTGGTAAAGTAAATTTTCCGTCAAGGGG
GCTTAACGCTTGCATTGCTTGGAATTGGGCTACTTTCCTTTTCTGTATGT
TCTTCTTTGTCAAGGTTGGCGTTATTCCATCAAACTAGCATACCCGCTGG
GGTATGGCTGGAAGGCTTGGGCATCGTCGTCTTGTTGTCTGTACTTGGTT
TCCGATGAGGCCGATGTCCGATTGATGACTGCTGTTGCAAGTCCATGTCG
TGGTATGTTTTTTCCATACCATACGCATCCGTGTATTGTTTCGTACGAAT
TGACGTGATTTCAATCCGTCGCCCCCACCTCTAATGGTCCACATGATTCC
CCGTAACCTCACCTTGTATGGCCGTGCCGCTGCCGTCTCTCTTGCTGTGT
TTCAAAAGGGTTGGCCTAACGGAGGATAGCGTGCACAAGAGGGACAACAA
GCTCTTCGAAAAGCTGCAGCTCAAGCTCAACAAGGTAGCGGCATGACTTT
TCGTCTGTAGTTGACGGAGTATGTGGTTCGTGTACAGGTTTGAGATCCCA
ATCGAGTCGCAATCAGCTTGTTATTCATGCTTGTTAGCGAGGAATCGCGC
ACGATCGCATGCGCAACATGTTAGGAGAACAAGGTAATGGAGGAGCTCGA
TGCACAAACTCACAGTGCTTCACCCAATCCGCCCAGTGAACCGCAGTATT
TTATCTTTTGTTGTACTGTTAAAGCAGGTCATACATAGCCTTGGACGACT
GATGGACGTTCTTGACCACACACTGCCGTATTAACGTGTCGACGCTTGGG
GGCAGGTGGAGCACTTGTTGACGGAAAACGAGCGAATCACCGCTAAAGAG
GGCGGGCAGGGGGGCCTGACTGAGGGCCAGCAGGCGCAGCTGGCCAGAAA
CGATAAAGCCATTACTGCGATCAGGTTGCAGGCAAGTGTCGGCAACAATG
TTAATAGTTGTTGAACAAAGACCGACAAGGGACGGGGAACTAACGAACCT
GCAGCATCAACTAGCATCTGATCTTATCGTATCGTTGATTTCTATTTTTT
CATTTTCGTCGGTACTTCTGGCGCCTGGACGGGATGAGATCTTTGAATAA
TTTCCGGTCCTGATACGTCAATACGTCACTGGCCTACTGCACAATGGGGA
TGATGGTGTTTTTTTGTTTTGTTTTCGGTGTCTTTTGTCTTCTGTCATCG
TGGTCGTGTTTCGTGGCGTGCTGTGTGTGTGTGTTTTTTTTTTCCCGCCT
ATCCCTATCGTTATCGTAGTGGGGGACGAGAAGAAGGTAGGTCGGATCGT
CTTTTTCATGTTTTTTTCTCTCCTCCCACCTTTTTTGGTTTTCGTCTCCT
CCCGCGGCATTCTCCTATCATGCCTCGCACACCGCTGCGGGGTAGAAGTT
CCGACGAAACTTGGTGTCATTACAAGACCAAGTCTTGGCTTGAGACAATA
TGTAGACACATCGGTGAGCCGCCATCAATCCCACCAAACCCCCGTAGAAG
CCGACTTGCTCCGTTCAAGCAAGTGCCCGAATCGGAAGAACGGAAGAACG
GCAGGTAAACGGCAGTAGGAACCATTCGGCTGGGTTTGTTGTCGGTGCTA
GTGTTTGATTGGTTGGCTGATATCTCGACATTTTGACATGTGGAGGAAGG
GCTTCTTGACACTGACACGTGGTAGCTCTTTCTCTTCTATTTTTTCTGGG
CTGCCTTGCCATCGCGCAGATCGAAGAGATCGAGGAGACCATCCGCTCCA
AGAACAAGGCGCGAGAGCGAAGCAAGGAGGGGGGCGATGAAAATAATCAT
AATCATGGTGGGGGGCGGGGGGGGGGGAGCCGCAGAGTACGGGGAAGAGG
AGGACGACTACTACGACCGGTAGGGAAAAAAAAGACGAATTTGCTTTTAT
TGATTTGTGCTTGGCCTTCCTTTTCGCGGAATCTCGTGATACAACCTTGA
CGTGTACTCTCTTCTCAGCCCCGAAAGAAAATTACACGAAGTTTCTCAAG
CTGAGGACGGAGTAATATGCGTTGAGCTGCTGTGCTCAAGCAGGTTGAAC
TACCGATAGCGTTCGCGCTGAGATAGGAATGGTGCGGTTCAGCTTCAGTG
GGGTACCCACCCCACCAAACCATCTGCGTGTGAATTATAAGCGTCAGACC
ACATAATCAGTTTTTACTGCAGCAAAGACCGTGGCTTGAGCGTTTTTTTC
TCATGTCGAACGATAATTATTTTCTTGCCGCTGTAAGTTACATACGTGCG
TGTCTTCCAAGGATATACGTGGTGTGATGTGTTGACCTTAGCCAGAAATC
GTATTGATTGACAACTGCGAGGTAAATGAGAAAAAAAGGTGGGAACGAAC
GAACGAACGAACGACGACCGCCGCCTTTCGATAGAGAGATTTAAGGAGTT
TTGACATCCGACATTTGACACTGCAACGCCCAAGCGAAAGGGTTCGTGGG
TTCAAATCAACCAACGCCCTAGAACACCGCCCACCCGGTAACCTGGTAAC
CGCAGCGCCGACGTTCCTCTCCTCTTGCTAGCATAACGGATATGCATGAG
GTTGACTGTTGTTGTCATGTCACGTTACGCAGAACTGCTCCGATAGCGCT
GGCCTCCTCAAGTAACGCTGGATCAGACCCCGTCTCCAAGAAGGCCGAGA
TCAGGGCACGCCGCTTCGGTGGAAGGGACAAAACGAAAAAGTTGTCTGCG
ATGATGTCACCAGGCGACGGTAGTGCGGCAGCGGTTGCTGGAAGCGGGGG
TGGCCCGGTAGGGGGCGAGCCCGCGGCGCAAAGCTTGGAGGCGCTGACAA
GGCGAGCCGAAGTCGTAACGGAGGATTTGGAGCGAGCTGAGGCGGGATTG
GTGGAGTTGGAGGCTGAGGAGGCCGAGGAGGTGGGGGAGAAGATTCGGGA
GGTGTTGGGGAATATGGCCGTGCAACGGCTGACCCCTGGACATGTTCATG
ACGGAAAACCGCAAAAAGGAGAGGCAGCAGGCAATGCAGAGGCTCACGTC
CAAGCGAGAATCTCTCCTGGAGGAGCAGGCTCGCCTCAGGCGTATGGTGG
AAGCGGCGCGCCCATCCCTCCCGTCGTTAAAAAGGAAATCCGCACCAGCA
CCAGCAGCTGCTGTAATTCCGGCCGCGAAGGAGGGGGTGGAGCAGTCTGG
TATTGACTCAGCCGAAGATTTGGACGTGTCCCCATCGGATCAAGCGGCTG
TCGCTGACGGAATAAGAAATGACACAGACACAGCCTCGGATCGGAGGCAT
GTTAAGGTGCCAGGAGGGAATAGTGGAGGTGAGGCAAGCGAGGCCTGCCG
CGGGAGCGGGGTGAAAGCCGATGAAAAGGACGAGGGGGAGCAACAGCCAC
CACGGCCTACAAGTACAGTTCCTGCACCGGGAGCTGGTGGTGGGCGTGGT
TCGATGTCCGAGCCAGCGGCGTTACCCCGCCAGTCAACCGCCGTGGCGGA
AGAAGACCGAAAATCGCCGGCTGGAGAGAAGGGACGAGGGACAAGAGGTG
AAAGCGGTCAAGGAGTAAAGCAGCACCCGACGGGGAACAAGGCTAAAGTC
TCGGGCGCAAAGAGGCGAGGGACGCCCGTGGGGGCGTTGATGCTGCCCCC
GCCGCCCTCGAAACGCCAACAACGTAGAGAAGAAAGCTTGAATGCGAGCA
TGGCGAGGGAGGAAGGTGAGGGTGAGGCGATTGTATCAGCGAACGGGGCC
AACGCGAAGAGAACTGTCAAAGGGCCAGCACCAATGCCTTCCCCCTCAGG
GATGCCTCCCCCCGCGGGCAAACCTTCAGCCGTAAGAGCAGGTGCTTCTG
GTCCGACGGCGGTGATTAGCCGAGGTGCAGGGAGCGCAGTGTCGGGGACT
GACAAGGACGTTCTGGAAGGGGGAGACGTGGATTGGGTTCCGCCAAAAGG
TGCACTAGAGAAGATGGCGGCTCTCAACCAAAAATTCGGGTACTGATGTA
ATCTAGCTGAATGTCACTGAATCGTGTGTGCACACAGAAACGTTGCTTCG
GTTTGGAACCTCCAGGTATCACGGTGTGCCATGGAAAAGTTACAGAGATC
ACCTAAAGTTGGCATCCCAATTTTGGTAGTGTTTCTGGCAGCCGATGCCG
CGGGGTGCTGGTGCTGAGATGATCTACCCGTCTCTACTGGAAGCTACACG
CGTGATTGTTCCCTCGTCGGCATGAGGGCTAGGTAAAGAGGCCATGGCTG
CTGCACCAGAGTATCAAGATGGGCAATCTACGTAGGGGTACCTGAACGTC
AGGGTACTGGGCAAGGAATCTATACATGAAACCTATTGGATGGGCAGTAC
CATCGTGCGTGAGCGAGGATCCCAATTATTTTGATCGTTTCCACTTTTCC
ACTCATCACGTCTGCTTGGTCCGGCACACTGCACTTACATCACGTGATCG
CACAGGAGGTTATTAATGAATGCAAACAATGCAATGCCAAATGCCAGGAG
AAGGAAAAATCTAATCTACACCGATCGTTTTTCTCAAACCGGCCCGCCCG
CCCGCGCCTCATATTACTCTCATTCACTGGGGCTCATCATCACCATCATC
ATCACCATCATCATCATCACCATCATCATCCTCATCATCATCACCATCAC
AGCCGTATACAAAAACGGCTTTGAACCCCACCCTTTCACAATGCGCCACT
GCATTCTGCGAGGCTGGCTTAGCAACGTGCCCCTCTTGCACTTTCCGCCT
ACAGTAGTATTCAGTATTGGAAACAAAACACTCCGAGAGGCTTGGCACCG
TTTCGGTCTTAGGCAGACGCAATAATTCAATCGATTCAATCGATTCACTA
TGATAATGCTGGACGATGGTGTATTGTAATGCCAGAAAGCTGCAAGAGTT
TAAATCTTTCATGCCGAACGAAAGACTTGGTATCGAAGATAACTACGCCG
CCACATGTGATACTTGAAGTGACTAACTGCCGAAGTTGTTTTTCCGGCGA
GACTGACTGGGGCAACTAAAATATGTCATTTTTGTTATGTCGGCCTCCTA
GGGTCATCCTTGTGGAGAAGATGCCTCCTGCCTAGCTTCAAGAGCTGGTT
TTGAGTGATGTGCTTCCCGTCCACACGTATAACGTCCTCTATCTTGTCCT
GAAAGAAGGAAAGACAGCCATGCAAAATAAATGCAAGCGAGTTAGCTTGG
TTCCTGAGTTGACGTCGGCTGAATGGGGGTGATTCCAGGAGAGGAGAAAG
AAACACGGTCACATCAATCTAACAAGACATTCATTCATGAGGGTCATTTC
ACCAAACTAATCTCCACCGTCAAGTTCTCTCCTATGTTGTTGTATTATTG
TATGTTTTGACTTGTTCCGCAATCAGAGACAATTAACTCACCACACACAA
ACATGCGTCCTTGCCGCCACGTCGGGCACATGCGACAGCGTGTATGGTTG
TTGTCTCGTCTTCCCCTGATTTTTGCAACAACGCCAACGCCCCGGGGGCG
TTTCGTCCGCAGTATTATATTTTCAAATATCGCCCCCACCCCTACAACGT
GTTCCCAACTTTTTTTTTTGTAAAAATTTCTTACGACTAGGATTGCCGCC
CGGGGCCATTGTGTGACAGTGGATACTTCAGTCAGCCCATCGATAAGTCT
TCTATCTTGTCTTGTGTACCAAACACTTTTGAAGCAAGTCTGCCGAGGGA
AACTTATCCATCTCAGGGAGGACTGGGAAAACACAGCTGGAGAGATGTGG
AGGGTGTATCAAAGGGATCTACTTCAATTGATCGTGTTACCTCATCAAAC
AATGTTTCAAGAAAATGTTCCTTCCTTCAAAACGAGGTTGCAACACCAAA
ATGTCGACCGACAAAAAGAAGCCCATTCGATTCGTTCCTCACCGTAAAGC
TAGGCTTGCGTTCGCAGAGAGCCGCCGCAAAAACCTCGGCGATATTGGAT
TTCGCGTTGCCGTGACCGACCTTCCGTATACAAGAACAACGACAACGATG
AAAACATGAAAAAGACGACGCGCACGAAAACAAACGGTATGCTGTACAGT
AGCATGGCTGAGCATGGTGTACGGTACTCCTTACGAGCTCACTCGAACGT
AGTGGTTCAAGCAACGACAGGGGCCGACAGCAGTTTGTGTTGTCTATTGT
GCCGTTGCTTTCGTTGGATGTCGTGGTCTACACTTCACACACCAAAATCC
CTCTATTACAATCGCCATTCGGCCCGTCTTTGCTGTTGTCCAACCGCCAA
GCCAAGCCAAGACATGGTTGACGAAACCAACATCCTTTACAGCCATGTCA
TGTCATTCATGCCCTTGCTCCGAGTGAAATAAATTTCTAATCCCGTCTTG
GTCCTTTCCGTTTGGACATGAAGAGATGAAGAGCAAAGAGTACCCTATCC
TACCTTCAAATATGTTCTGATTGTCCCCTACATTCGAAAGCGGAACGGTC
GCGGGTCACCACGACGGTGTAACAGTGTCATGTGTCATGTGTCGTTTTTT
TTCTTTCTTTCTTTCTTTCTCACCAGCAATACGGAGTCTGCGGCGTCGAT
CACCCCGGACAGCTCTTCCATGTAAAACTTGACCAGGTACGCCTCCTCTG
CCACCGGGTCAA back to topCoding sequence (CDS) from alignment at P-lacustris_contig1229:39688..49849- >mRNA_P-lacustris_contig1229.1697.1 ID=mRNA_P-lacustris_contig1229.1697.1|Name=mRNA_P-lacustris_contig1229.1697.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2190bp|location=Sequence derived from alignment at P-lacustris_contig1229:39688..49849- (Pleurocladia lacustris SAG_25_93) ATGGTTGGTGGTCTGGCTGGCGGCGGCTCGAAGAGACAGACGGCAGCGTC AGCTAGCAGCTACAAGCCTCCAAGCTGGGGATTGACGGAAGCACCGAATG CCTCTGGGCTGTCGTTGACCGTGCTCAAGGGCGGTGTCGAGGTCATCAGC ATTTCTCTGGACAACCGCACACATTTTTGCTGGGTGAATGGTTGGTGGTC TGGCTGGCGGCGGCTCGAAGAGACAGACGGCAGCGTCAGCTAGCAGCTAC AAGCCTCCAAGCTGGGGATTGACGGAAGCACCGAATGCCTCTGGGCTGTC GTTGACCGTGCTCAAGGGCGGTGTCGAGGTCATCAGCATTTCTCTGGACA ACCGCACACATTTTTGCTGGGTGAGCAGGCAGCAGGGCGTTGTGGACGTG TTGCTGGAACACCCATCCATCTCGAGGAAGCATGCCATTCTCAGCATGGG CAGAATGGTGTGCAGGCAGCAGGGCGTTGTGGACGTGTTGCTGGAACACC CATCCATCTCGAGGAAGCATGCCATTCTCAGCATGGGCAGAATGGTGTGT GCTCTATTTCTTTTCGACAATGGAAGCACGCACGGCTGCATGGTTAACAA GGAAAAAATCCCGTCTAAGGTGCTCTATTTCTTTTCGACAATGGAAGCAC GCACGGCTGCATGGTTAACAAGGAAAAAATCCCGTCTAAGGAGTTCCATC GACTCCACGTGGGCGACGTGATCAAGTTCGGAGAATCTACACGGCTGTAC GCCCTGGAAGGTCCGGACGAGCTAAAGCCTGCGGAATACGAAAGCGAAAA TCTCGAGTTCCATCGACTCCACGTGGGCGACGTGATCAAGTTCGGAGAAT CTACACGGCTGTACGCCCTGGAAGGTCCGGACGAGCTAAAGCCTGCGGAA TACGAAAGCGAAAATCTCCGCAACTTGCGCCTCGACGCTGGACGGAAGCA GCTGGTCGCGAAGCTGGCGAAGCTTAAGGCAGACGCCGCGGGAGAGGGGG GCAGGGGTGGTGGGGGGGACAGCGGGGAGTACGGCATCAGCTGGGGTTTC GACGAGGACGCGATCGACGAGGAGGAAGACGAGGACGAGGACGGGGAGGG GGAGGGGGAGCGCAACTTGCGCCTCGACGCTGGACGGAAGCAGCTGGTCG CGAAGCTGGCGAAGCTTAAGGCAGACGCCGCGGGAGAGGGGGGCAGGGGT GGTGGGGGGGACAGCGGGGAGTACGGCATCAGCTGGGGTTTCGACGAGGA CGCGATCGACGAGGAGGAAGACGAGGACGAGGACGGGGAGGGGGAGGGGG AGGTGGAGCTCCCTGACTACCTCAAGACGGAAGCCCAAAAGCGGAGAAGG CGCGACACAAAGTGGAGCTCCCTGACTACCTCAAGACGGAAGCCCAAAAG CGGAGAAGGCGCGACACAAAGGTTGGCCTAACGGAGGATAGCGTGCACAA GAGGGACAACAAGCTCTTCGAAAAGCTGCAGCTCAAGCTCAACAAGGGTT GGCCTAACGGAGGATAGCGTGCACAAGAGGGACAACAAGCTCTTCGAAAA GCTGCAGCTCAAGCTCAACAAGGTGGAGCACTTGTTGACGGAAAACGAGC GAATCACCGCTAAAGAGGGCGGGCAGGGGGGCCTGACTGAGGGCCAGCAG GCGCAGCTGGCCAGAAACGATAAAGCCATTACTGCGATCAGGTTGCAGGT GGAGCACTTGTTGACGGAAAACGAGCGAATCACCGCTAAAGAGGGCGGGC AGGGGGGCCTGACTGAGGGCCAGCAGGCGCAGCTGGCCAGAAACGATAAA GCCATTACTGCGATCAGGTTGCAGATCGAAGAGATCGAGGAGACCATCCG CTCCAAGAACAAGGCGCGAGAGCGAAGCAAGGAGGGGGGCGATGAAAATA ATCATAATCATGGTGGGGGGCGGGGGGGGGGGAGCCGCAGAGTACGGGGA AGAGGAGGACGACTACTACGACCGATCGAAGAGATCGAGGAGACCATCCG CTCCAAGAACAAGGCGCGAGAGCGAAGCAAGGAGGGGGGCGATGAAAATA ATCATAATCATGGTGGGGGGCGGGGGGGGGGGAGCCGCAGAGTACGGGGA AGAGGAGGACGACTACTACGACCGAACTGCTCCGATAGCGCTGGCCTCCT CAAGTAAAACTGCTCCGATAGCGCTGGCCTCCTCAAGTAA back to top
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