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Homology
BLAST of mRNA_P-lacustris_contig122.1647.1 vs. uniprot
Match: A0A6H5JCP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP3_9PHAE) HSP 1 Score: 293 bits (750), Expect = 4.320e-83 Identity = 179/294 (60.88%), Postives = 200/294 (68.03%), Query Frame = 3
Query: 1050 GFGGGDGEG--KVEQQYLLV-----SRGTSRGMLPSIVTSILVHLFACCRAEVDKRLTARVDGLRTFLGGGEVVQLGSGADGGGLEAGGPKASLAVAAAGSTSGTPVG-MAPDTKELLYSELRRRHKTISGIGRKDLVVLSARVLSRALKTEERKGFGRMLVHLTWSTFEPVVRSYLALFVESALQQPQIEFEDAAGKEELFDREKHRELARFSRIGSPDGGTPDVSVAGPGLPLESN-YHFQGLVGQPDDGSGDEGGVDNTSSRTCCVVFPAVYASIARWPPSEAAMSGVIVY 1904
G GGDG G K EQ Y + SR + ML S+VTSILVHLF CCR EV +RL RVDGLR F+G E VQLGS G G GGPKASLA AAAG+ TP G MA DT ELLY ELRRRH+TI+G+GRKDLV LSARVLSRALKTE +K GRMLVH TW TFEPVVRSYLALFVE ALQ+PQIEF++AAGKEE FD EKHR LA FS SP T GPGL ++S+ + +N S R CC+VFPAV ASI RWPPS+AA SGVI+Y
Sbjct: 276 GMCGGDGSGETKAEQLYSSLGQPQQSREQKQKMLLSVVTSILVHLFHCCRVEVRRRLRVRVDGLRAFVGEAEFVQLGSIVSGPGT--GGPKASLA-AAAGAAGATPGGVMAQDTHELLYGELRRRHRTIAGLGRKDLVTLSARVLSRALKTEAKKEIGRMLVHQTWPTFEPVVRSYLALFVECALQEPQIEFDEAAGKEEPFDPEKHRPLASFSAPASPRTST--TGERGPGLQIDSDTLNXXXXXXXXXXXXXXXXXNNNASPRPCCIVFPAVIASITRWPPSKAAKSGVILY 564
BLAST of mRNA_P-lacustris_contig122.1647.1 vs. uniprot
Match: D8LEG1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG1_ECTSI) HSP 1 Score: 216 bits (551), Expect = 4.740e-61 Identity = 121/187 (64.71%), Postives = 136/187 (72.73%), Query Frame = 3
Query: 1353 MAPDTKELLYSELRRRHKTISGIGRKDLVVLSARVLSRALKTEERKGFGRMLVHLTWSTFEPVVRSYLALFVESALQQPQIEFEDAAGKEELFDREKHRELARFSRIGSPDGGTPDVSVAGPGLPLESNY---HFQGLVGQPDDGSGDEGGVDNTSSRTCCVVFPAVYASIARWPPSEAAMSGVIVY 1904
MA DT ELLY ELRRRH+TI+G+GRKDLV LSARVLSRALKTE +K GRMLVH TW TFEPVVRSYLALFVE ALQ+PQIEF++AAGKEE FD EKHR LA FS SP GPGL ++S+ F+ GS D +N+S R CCVVFPAV ASI RWPPS+AA SGVI+Y
Sbjct: 1 MAQDTHELLYGELRRRHRTIAGLGRKDLVTLSARVLSRALKTEAKKEVGRMLVHQTWPTFEPVVRSYLALFVECALQEPQIEFDEAAGKEEPFDPEKHRPLASFSADASP-------RERGPGLQIDSDTLEPGFEXXXXXXXSGS-DVANNNNSSPRPCCVVFPAVIASITRWPPSKAAKSGVILY 179
BLAST of mRNA_P-lacustris_contig122.1647.1 vs. uniprot
Match: D8LEF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF9_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 1.590e-15 Identity = 46/65 (70.77%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 43 MSEEECRTDSICCFQDDSGAEVLRHTAAGLAAALVLCLSAVLVITVAWARTTGRG--RGGVTKES 231
MS EECRTD ICC+QDDSGA+ LRH AAGLAAAL LCL+A+LV VAW R +GR GG TKES
Sbjct: 1 MSLEECRTDDICCYQDDSGAQGLRHIAAGLAAALALCLAALLVAAVAWKRASGRDCFGGGHTKES 65
BLAST of mRNA_P-lacustris_contig122.1647.1 vs. uniprot
Match: D7FSP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP0_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 3.990e-11 Identity = 57/187 (30.48%), Postives = 86/187 (45.99%), Query Frame = 3
Query: 1110 GTSRGMLPSIVTSILVHLFACCRAEVDKRLTARVDGLRTFLGGGEVVQLGSGADGGGLEAGGPKASLAVAAAGSTSGTPVGMAPDTKELLYSELRRRHKTISGIGRKDLVVLSARVLSRALKTEERKGFGRMLVHLTWSTFEPVVRSYLALFVESALQQPQIEFEDAAGKEELFDREKHRELARFSR 1670
G S L V S+L + F CR EV + L R+ L FLG E + L +G + M DT+ +LY L + ++ I + L+ VL R + +R +L TW +FE ++++YL +FVE ALQ+P++EFED G FD HR+ A +S+
Sbjct: 326 GGSHPALNGTVLSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDE---------------------------MNLDTQYVLYECLCKDYQRIVPADPDRMDALAGVVLQRCGEPADRSLANEILSGATWPSFEALMKNYLLVFVEMALQKPRVEFEDNLGDAMTFDSIIHRDWAPYSK 485
BLAST of mRNA_P-lacustris_contig122.1647.1 vs. uniprot
Match: D7FSP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP1_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 4.150e-11 Identity = 63/219 (28.77%), Postives = 99/219 (45.21%), Query Frame = 3
Query: 1110 GTSRGMLPSIVTSILVHLFACCRAEVDKRLTARVDGLRTFLGGGEVVQLGSGADGGGLEAGGPKASLAVAAAGSTSGTPVGMAPDTKELLYSELRRRHKTISGIGRKDLVVLSARVLSRALKTEERKGFGRMLVHLTWSTFEPVVRSYLALFVESALQQPQIEFEDAAGKEELFDREKHRELARFSRIGSPDGGTPDVSVAGPGL-PLESNYHFQGLVG 1763
G SR S+L + F CR EV + L R+ L FLG E + L +G + SL D + +LY L R+++TI + L+ +L R + +R + TW +FE ++++YL +FVE ALQ+P I+FED+ G FD +H +LA +SR + S+ P + P E++ H +G
Sbjct: 180 GGSRQTWYGTTRSVLYNTFLVCREEVQRCLDERLQILSAFLGNAEPILLSAG----------DEKSL-----------------DPQYVLYECLCRKYRTIVSTEPDRMDELARLILQRCGEPADRGLANEITSGATWPSFEALMKNYLLVFVEMALQKPGIDFEDSLGDNVAFDPAEHCDLAPYSRAPTAQ----HCSIVFPSIRPQEAHPHSNAKIG 367
BLAST of mRNA_P-lacustris_contig122.1647.1 vs. uniprot
Match: A0A6H5KFA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFA2_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 1.440e-9 Identity = 52/187 (27.81%), Postives = 84/187 (44.92%), Query Frame = 3
Query: 1110 GTSRGMLPSIVTSILVHLFACCRAEVDKRLTARVDGLRTFLGGGEVVQLGSGADGGGLEAGGPKASLAVAAAGSTSGTPVGMAPDTKELLYSELRRRHKTISGIGRKDLVVLSARVLSRALKTEERKGFGRMLVHLTWSTFEPVVRSYLALFVESALQQPQIEFEDAAGKEELFDREKHRELARFSR 1670
G S + + S+L + F CR EV + L R+ L FLG E + L +G + M DT+ +LY L + ++ I + L+ VL R + + ++ W +FE ++++YL +FVE ALQ+P++EFED G FD HR+ A +S+
Sbjct: 156 GGSHPAVNGTILSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDE---------------------------MNLDTQYVLYECLCKDYQRIVPADPDRMNALAGVVLRRCEEPADESLANEIISGPAWPSFEALMKNYLMVFVEMALQKPRVEFEDNLGDAVTFDSVVHRDWAPYSK 315
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-21_004840.1 |
| Exons | 5 |
| Model size | 3884 |
| Cds size | 1167 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815538.4178073-UTR-P-lacustris_contig122:160330..160418 | 1622815538.4178073-UTR-P-lacustris_contig122:160330..160418 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig122 160331..160418 + |
| 1693493597.7583907-UTR-P-lacustris_contig122:160330..160418 | 1693493597.7583907-UTR-P-lacustris_contig122:160330..160418 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig122 160331..160418 + |
| 1622815538.4276083-UTR-P-lacustris_contig122:166440..166957 | 1622815538.4276083-UTR-P-lacustris_contig122:166440..166957 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig122 166441..166957 + |
| 1693493597.769006-UTR-P-lacustris_contig122:166440..166957 | 1693493597.769006-UTR-P-lacustris_contig122:166440..166957 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig122 166441..166957 + |
| 1622815538.4367146-UTR-P-lacustris_contig122:167920..168055 | 1622815538.4367146-UTR-P-lacustris_contig122:167920..168055 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig122 167921..168055 + |
| 1693493597.7787385-UTR-P-lacustris_contig122:167920..168055 | 1693493597.7787385-UTR-P-lacustris_contig122:167920..168055 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig122 167921..168055 + |
| 1622815538.4804025-UTR-P-lacustris_contig122:170862..172839 | 1622815538.4804025-UTR-P-lacustris_contig122:170862..172839 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig122 170863..172839 + |
| 1693493597.8217914-UTR-P-lacustris_contig122:170862..172839 | 1693493597.8217914-UTR-P-lacustris_contig122:170862..172839 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig122 170863..172839 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815538.445768-CDS-P-lacustris_contig122:168055..168442 | 1622815538.445768-CDS-P-lacustris_contig122:168055..168442 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig122 168056..168442 + |
| 1693493597.7887526-CDS-P-lacustris_contig122:168055..168442 | 1693493597.7887526-CDS-P-lacustris_contig122:168055..168442 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig122 168056..168442 + |
| 1622815538.4567988-CDS-P-lacustris_contig122:168907..169351 | 1622815538.4567988-CDS-P-lacustris_contig122:168907..169351 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig122 168908..169351 + |
| 1693493597.805161-CDS-P-lacustris_contig122:168907..169351 | 1693493597.805161-CDS-P-lacustris_contig122:168907..169351 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig122 168908..169351 + |
| 1622815538.4708133-CDS-P-lacustris_contig122:170526..170862 | 1622815538.4708133-CDS-P-lacustris_contig122:170526..170862 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig122 170527..170862 + |
| 1693493597.8143227-CDS-P-lacustris_contig122:170526..170862 | 1693493597.8143227-CDS-P-lacustris_contig122:170526..170862 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig122 170527..170862 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig122.1647.1 >prot_P-lacustris_contig122.1647.1 ID=prot_P-lacustris_contig122.1647.1|Name=mRNA_P-lacustris_contig122.1647.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=389bp
MHAHIDWRRGGGGSPLTHLASPRSHFGSASDMGTPSRAGAGLCKRLHYVG
NAASMHPGSSRGHRLTHSSHHKFPSARAVEAHALEASANAAKWARSAMTR
AAAGFGGGDGEGKVEQQYLLVSRGTSRGMLPSIVTSILVHLFACCRAEVD
KRLTARVDGLRTFLGGGEVVQLGSGADGGGLEAGGPKASLAVAAAGSTSG
TPVGMAPDTKELLYSELRRRHKTISGIGRKDLVVLSARVLSRALKTEERK
GFGRMLVHLTWSTFEPVVRSYLALFVESALQQPQIEFEDAAGKEELFDRE
KHRELARFSRIGSPDGGTPDVSVAGPGLPLESNYHFQGLVGQPDDGSGDE
GGVDNTSSRTCCVVFPAVYASIARWPPSEAAMSGVIVY* back to topmRNA from alignment at P-lacustris_contig122:160331..172839+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig122.1647.1 ID=mRNA_P-lacustris_contig122.1647.1|Name=mRNA_P-lacustris_contig122.1647.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=12509bp|location=Sequence derived from alignment at P-lacustris_contig122:160331..172839+ (Pleurocladia lacustris SAG_25_93)
CCACCCACCCCGTGTGTGCGAGGAGGGGAAGCAACAAAGGATATGTCTGA
GGAGGAATGCAGAACGGACAGCATATGCTGCTTTCAAGGTGAGGCTGCAG
TATGACCAGCGGTTCATCATGTCTGTGTAGTCCTCCTTATTACCTCCGAC
AACCCGAATGTTGATTGCCCGATATGATTTGTAGCGCAGAGCTCAAGCAT
GGCGGTCCCTCCGGTACATTCACAGATATGTGTAGACGGAGAGCTTGCTC
CCCTGACCAACGTTGGATGACCTGTGTGGAAGCCTAGCCCTGTTTGCCCT
CCTCTTTCTTTTCACCGTTCATGAAACAGCAGTGAGGCGGACGTATGCAA
CATGCATCTACTTATTCATACAAATGTAAGGGTTCACGTCTTCATCTTTC
TGCTGCCTCTTGCGACAAAAAAACATGGGCGATCTTCTCGGGATATACTC
ATCAGCCTAGGAAGCACCCCTCTCGCATCGCGGTTGGTTGGCAATATAAC
GAGTCACAACTTCAGCAGCTGAGATCACCACTAGCCCACTTTTACTCAAG
GGAAAAACAAGAGGAAAAAAGAGCCAGCGCAACAGCAGCCGCCTCCCCCA
GCGGAAATGGCCTTAATTACAGCATGATCAAGTGTACAGCAGTCGTCCCT
GGTTTTAAGACCGCACTCCACTCTTTCGTGTCCCCGCCCCCTCTGGCGGG
AATTTTTCGGCTGCCGGATGGACTTTTGGCGGAGGCGGAAGAACAAAAAT
AGTCTTTCTTCGTAGAGTAGTAGTCATGTACTCCGGAGTACTCCGTATGT
TTTTTATGTTTTTATAAAAAAATGGCGGGAATTTTCGGTGGGATACTGCT
GTAGTTTTCGGTGGGATACTGCTGTAGTTGTACAGCACACGCAAGAGAAT
ACTTGTACATTGCCATTTGGCGGGTATATTTCGGCGGATGACGGATATGC
GTTCTTTGGCGGATGGGCCGAAAAACGGCGGTAAATCGGCGGTTTTCCGC
TACTTGTACATCACGGCGGGCGGGAAAAAAAAGTATCACACCCTGCTGTA
ATGCTACTTCTGCCAGACAACTACTCTTTCAGAATATGGTACAACTATTT
GAGCAACTACTCTGTCAGAATCTTGCAACTATTCGTCTGCAGACAACCCC
CGGGAAGTTGCGCCGTGGTCACAGGCTAACTTACCTAAAAAAAGGTACAA
AACTAAAATGGACCCGAGCGGTCCGCAGAGCGATAGAAAAAACAAACAAA
CAAACAAAAACAAATAAGAACAAAAAGGACAAAAAGGACAAGTAAAGAGC
AGTGGAGCCCTCCGCTCCCCTCCGCACGCTATGCAAAGAAGGTGGAAACA
AGAGCTAGAACTCCAGCATCACCAATCGGGGTATATGCACCCTGATTCTA
TCTTGATAATATACCCCTACGATGCCGGGGTGTTCCGTGCCGGTTTCCCC
CCGGTAAAGGCACCTACATGAAATAAAATAAAATCAAAGTAAATCGAGGT
CCTCCCCAGCGGCTGAGGTACGGGCATGATGCAAGGGACAGGGACGAGAC
AATGATGGGAGGCAAAGCAGGATGCCAGGATACAGGGAAACATGCCAAGG
TACCAGCGCAAAGAAGTAAATATGACCAAGCACAAAGGCAGTACAGACAC
GTCATCGCTCCGGTGGTGGAATGGTGCAGCGGTGGGATGGAATGGTGCAG
CGGAGGGGCGGAGGAAAGCAAACAAACAAAACAGAGCAGAACAAAAACAA
GGCATTGGAGTTCAGTCCGTAACATGTCGTGCCACCCGGTCGGTCTCTTC
TCGCTTGCTTTCTTCCCTCGCCGTTCCCTTTCGCCCCCTTCCCGACGTAT
CTCGACTATTTCCGCCGCCTTCCCCTCTCTTGATAGCCCGTAGTCGGCTA
GCCTCTTCTTCTTTTTTGTGCCTCGAGGTCATGAACCTCTCAGCTCCCTG
CAGTACCCCCAGGTGCCACGATACTCCCCCGTTCACCTTCGCCGCCTCCG
TCCAGCGCAATTTCGGGATTCCAAAGAAACACGGTCGTGGAGCCGTGTGT
GGCCCCGAACGCCTTGAAGTCGTCCGTCAGGCATGCCATCCAGTTCTGCT
CCGGTTTTCCCCTGCCCGGGTCCTCCCCCACCAACTCGCCGAACATCAGT
CGTGCGTGAAAAAAAAATATCTACCCCACTTGACCTATTTCAAACTCGAG
CTTCCCGGTCCCCTCCTTTTTCTGGCTGTGTAGCTTTCCTACTTAGACCG
ACTCTTATGGTACAGAAATAAAGTTTCTGGAGAGCAAAAAAAAGTACCAA
CCCTTATGGGGCCGTTATTTGGCGGAATTTGGCGGAATTTGGAAATATAT
AATCCCAGCCGGCCGGAATTCCTCACCTTGCTGATATATATATTGTCGGG
ATTTCCGTGTAAACAGCGAATCGATTGCAAACTCAGATCCTGGTATTGTG
CGTACCACGTGGTCCGTTTGGTATGGAAAAGTGACATGTCTTGCCGTTCC
CGCCTCGAAACTAGGGGAAGTTGTCAGCAGCAGTTCAGTACCTCAGTATG
CAGGCGCGGCGGACACGCGCCATGCCCCATTCGGCATGGGACTTCCCTAC
AGCAACAGCACAACATACATGATGATCTCTTTCGCTACACAAGCACACAC
TCACAGCAGTTCGCGAAGGTGCCGCGTTGTTGGTTGTTGGGGTAGCGAAA
AGAACGCGCGCGTGTGTGTGTGTCATCACCGCAGCTCATTTTATTCTTCG
CGCGGAAAACGGGAACTACATCAGACTACATGCAACAAATTGTACAGGCA
GTACATCGACCCTCTTACTATGCACATCTCTCACACGCAGTGAACGTATC
CAGGTCAAACCTTCAATGCCATCATCTACACGCACTATTCTCCTTCGGGT
GGGGTGCTTCGACCAAGAGTTACAGGCTTCGCGCACCCTAGGCTTCGTTC
TTTCCCCTAGTCTAAAAAGAGCAACTGCCAACGATAAAACAACAGCTCGG
CTTGTAGTGAACGACACAATCACTCGATCGAAGCATCGCACAGCGGACCC
ACTCTTATACTAATAAGGTCGGTGCGTGAATATCAAGCATCGACTCTCTG
TCCTTGTTCAGTAAACTACGGCGTGAGAGATGTCATACCCTTTCTTGGAA
GCTGTTTACCTCCCCGCGTCTCCATGAGCTGGGCTCCAAAAGAGAGAGGG
CATAGGATGGGAGCTAATGCTTGAAGTAAAAAAAGCACAAACACGCAGAC
AAATTCGGCTTCTTTTTTCCGCGTTTCTCCTATGATTGCAGCTTGCTTTC
GCCGCTCTACCACGACCCACAGTGTACCACAAAGGGTTGCGAGCGGATGC
GTCGTGAGCCCTACTCATATCCTTTCTCGGAAACTGTTCACGTCGCCGAC
CCTACCGCAGACGAATTGGGCTCGAAACCTTGTCGAAACTCCACATGGTG
GCATTTGCCTGCCAGTGACGTCAATCCAATGATGTACACAGTCAGTTTGA
TTGGTTAAACCAATTGCAGCAGCAGCTGTAATCGATTTTTGATTGTGTGT
GTTAGGGGACAGAAACATGGCGATTCTTCCGCACCTATCGATAACAACCG
TGTTTGGCACACTGCTGTTCGCGGTGGGTTCGGCCGTTGCGGCCGAAGTC
TTGGTTGTAGAAGGTAGCCGAGACCAATGGTAACGCAATAAAACACTATG
GTTGCGTCCACGCAAAAGGTACGGGGGTGGATTTTTCGATGCCGTACACC
CCAAAATGACCCAGAAACGCCTATTTTATTCGGATTTTCTCCCGGGGGCG
TGTTGTCATCGGCCATGACAAGGATCGCAACAGCAGCGAACCTGTGTACC
ATGTGCTGCTTGATCAGCGGCTGTGTCGCGATCAACCGGCTTGAAATCGG
ACGATATTTTTGTGTGTTTCGTGTGTAATTCGTTAGGTTTGAATTTCTTT
CTGTAGCAAAAATAAGAAAAAGCTTCTTGTCGCCCGAAAATTACGACACG
GCCAACGAAAAAAGAACGCAACATCTTCAGAAAACTGACAGCAGTCTCTC
CCCTTTAGGAGTGCGGCCTTAAGACGCGCGTGGTTTTTTTTACTCGAATA
GCGTCTTTAATGCTTCGCTTCGCGTGTCGAGTGGGAGCGATGGGCTCTAC
CTGTCCCCTTGTCCGACTCCTTGGCGTCTCACCTGTTTGTTTTTTGTCTT
TCAATCGCGTTTGTATTTGAGAATGCCGTGAGTCCAGTTATAATTTAGTT
TTTTTTTTATTTCATCTTGCACCATTATTTGTGGATAGCCAGCTTTGACG
GGGCCTCCGCGTCAGTTAGAGTACTGAGCAGTTAGAGTACAGAGGATAGA
AGGTACTGAGCAGAGACCGGAACGCTTTTTTCGTGTCAAGATCACAACAG
CAACAACACGCGGAAGCGCCTCTAAGGTGTGAGGGGACGATCTCTCATCA
TCCCCGGAGTCAATAGACACCTTTTACGTACACGATGCGTCTTGGGGAAA
CGAGTGGTGGCGCGAAAGGACAGAAAGCACAAGGCGGCGGACAAGCCAGA
GCACCCTGTTCGACGTTTTTGTTCAGTAAATGCTAAACTCAATACTTGTA
TGAATGTAATTTTCGTCAACGCTACTTGGCACCATACAGGTTAGTTAACT
GCTCGACCCCCGAGTACGCTACACTCCTGCGCGAAAGGCTAGTGGCTGGT
GCTACAGGGAGCAGTCACAAATTGCGACTTCCTTTTTTTTTGGCAGAAAA
GCGGCAAGTGCGTTTGCACCAAAAACGCTCTATTGTACGCCATAAATCAC
GAATAGTTGCCTACATCTCCCCCCGCTTTATCCCTCTACCCTTGACTTGA
GTCTCATGCGTGCGTAAAGAGTGCACAGCTTTCGAAAGAATCTGCTGTTT
TTACTCACGGCCGCTTCCTTTCACGTACAAAGAGGAGCGAATTTCCTCAA
AACGCGAGTGGATCTCAGCCTTTGTGATGTACGATTTTGTTCAGGATTGA
TCCTGGCCTACCGCCGCCGCCTTCCTCTTTCCTTGATTCTTCATCATCGT
CAATGTCGAAGTTGGCGAGGTCTTCATTTACAGGCTGCCGTTCCACTTCG
ATCTCGTCTTCCGAAACTTACGGGTCATCCACCCGTGTGTTTTGTTGGTG
GAGGGCGGGGGGCGTGAGATGAAATTACCACCCCATATATTTATGAAATC
ATGGGGCACCATAATTGTGAAAGAATCTCGCCTTGAAACGCGGGGAGCCG
ACTTAACCCGAGCTTTTATATGCAAGCGGGGACGACTGTTCGAAGCCCTA
CTTTACGTCACGATCGGTTGCAAACGTTTCACGGCTTACCAGAGTTTCTC
CGGCGCAATTATCTTATTGTTGGTGTCTTTGCACCCCGCATGGAACACAC
CCTTTCCGTAGAATTGACATCCTTTTTTTGCAGCTCCTTTTTGACTTACA
CAGCAGTGTATTTTTGGCCGTTTTTCGGTCGATTTTGTGCACAAAATCGA
CGGGATATATAGGTTCAACGAAGGACCGGCCGAAAGAAAAGCGTGCTCCA
GCTGTGAGTTGAAGTCATGTTGGTAAGCTAGCGGGGCAGGTGTGTCGTGT
GTGTTGTCATCCCATCTGTTATGGGCGTCAGGATTTTACCTTTCATTAGG
CTTGGATGCGCCAGCTGGGGACACAAGCGTGCTTGCACTTGTTGAGTTTG
AAAAAACAGGAAAGATAATACACGTGTTTAGCTTCAACATAAAAAAGGTT
TGGATTGTCATCTAGATTCCCGAAATGGCTCTTGAAAACCATGTGTATCA
CCTCGTGGTTTGTGTTTTGCCGTGAGCGTAATACTTTACGTGGGCTTGAA
CGATCGGTGACAGTCACGGCAACATGAAAAAATGTAAATAGGCCTCATGG
ATTCGCCGTCGAGGTGGAAGGCGTCAAGACTTCATCAACTCTAGGCCTTA
AACACGCCAACCGACGCGTACAGCGGTACGTGGTGCTTTCTAAATTTTTT
TGAGCGCGTATCGGAATCTCTTACCTATGTCACCGCTGTCCAACCACCAC
AAGTTCTTGCGGTTGCGTACGTTCTTATCCTTGCATTCGGGCCTGGCAAA
ACACCACCAGACGATTCGGGCGCAGAAGTCCTTCGACATACAGCGGCAGG
CCTCGCGGCGGCTCTCGTCCTTTGCCTCTCGGCGGTGTTAGTGATAACGG
TCGCTTGGGCACGCACCACCGGCCGTGGCCGCGGCGGGGTCACCAAGGAG
AGCCCTCCTTCGGGTGCTGAAATCGCGGCGAGATTACCACTGCCGCCAGC
AACCGACACTGCCGCAGCAGAGGCGGGCGAGAATGCCCCGCCATACCACA
TGGCAGTAGCAGCGCTGGACGAGCCAGACCTTGTACCACAAGGCAGCAGG
AAGAAATGCAATAGTGGTAGTAGCGGGGAGGAGCAGAGAACTACCAAGAC
CGAGAGCATTGATGGACGACGTCATTCCATCGAGCCGGCGCTTGTGAAGG
AGGGCTGCAGGGGCCAGCATCACACCACCCGTGCCACCGCGAAGCAGCAG
CAGTTCCGGCGGTCGGCGTCGGGCGTGAGCATCAAGAGCTATATGAGCGC
GGAGAGCCTCAACGATATGCCGGTCCCGTGAGTTCAGTTCAGGTTTTCTA
CAGCAGCAATGCCACGTGTGCATATGATTGGTTTCATTTCCAGCCTTGTG
TAGCTTAATCTTGGGCGGATGGAGGTGGGTCGCTCGGAGGGTGAAAACTG
TTGTCGCAACTTGAGTTCTACGACTAGTTAGTGCCTCACCGTCGGGACAC
GGAGAGCTCTCGCCGTCCAAGTTCCGGCGAAGAATTTAGTGGAGAAATCA
TCACTGTTTCATCAACCAACTCAGTTTCCTGCGAAGAGTGTATCCCGTAT
GCAGAGCTTTTAGTAGTTCGTCCCGGAGAGGAAATTGGCTTTGTACAGAC
TGGTGTCTATGTGTGGCGGGTCGCCGCCGCCGCGCGTTGCGTTGTGAGGA
CAACAGAACGTTGTTCTCGCTTTTGTCATAAGATATACATGCTTCGTTAA
CGACACGGAAGTTATGTCGTGCCCATCCAAAAACCAGCCGGACGGTACGG
ACACGAATGACATATTCCATATACCTCTCGAGGAACACCAGCGTAAACAG
TGTCGTTATTTACTCTCCATGGTGCTAGGCACACGCTACATTCCAGCCTC
CCCGGCCGCGGATCTCTGGCCAGCAATTTGTGCGCTGTGCTTGTGATGAC
GCATGTAACGGACGATTTTGACGCTTTTCGAGAGGACTTTTATAATTTCC
GTGTTAGAGGCAAAACAACATGACAATCGCAGGTCGTACCATGTAGTAAG
TGCCGTGTCACCTCAAGACAAACGCTGCAAAAAGGCGCGAAAAGCTAGGT
GGGAAAATGGAAGTGCTCATTTTCAGATGGCATGAAGCACAAAACCAGTG
CGGTCAATATTGCGCTCCCAATTGTTTTACACGGCAGGCGTCTCTAGGGC
GCTTGAGTTGCATAGCATCGACGGGGGGCGAGTATGCAATGTATCCCATG
TGACGGCTCCCCCTCTTCCCGTCCCGAAATATCTGTCCAGGGGGCCGCCT
TCCCCAGCGTCCACCGTGGCGCAGGTCGACATCAATCGCCTGCGTTCGCT
GCTAGACACCGAGCGCTCCCGCCGCGTTGCGGCCGAGAGCGCCCTCAGCG
GTGTCTCCTGGCGGGTCTCCGGCCTATGCACGCCCACATCGATTGGAGGA
GGGGGGGCGGCGGCTCTCCCTTGACGCATCTGGCTTCACCGAGGTCACAC
TTCGGCAGTGCCAGCGATATGGGCACGCCCTCTAGGGCAGGAGCCGGGCT
GTGCAAGCGCTTGCACTATGTCGGAAACGCCGCTAGCATGCACCCTGGAT
CTTCCCGGGGCCACCGGTTGACTCACTCGTCGCACCACAAGTTTCCGAGC
GCACGGGCTGTGGAGGCACACGCGCTAGAGGCTTCGGCAAATGCAGCGAA
GTGGGCCCGGAGTGCGATGACGAGGGCGGCCGCAGGTTTCGGTGGTGGCG
ACGGAGAGGGCAAAGTGGAACAACAATATCTTTTGGTGAGTAGAGGCACG
AGCCGTGGAATGGTCGGTCATCCAGTATAGAGGGTGTGCGAGAAAAGCTC
GTCTCCTTGTTGTTTGGGCGTTTTTGTCGGTACTTGCGGCGGGGGTATGA
GAGCATTTAGGTTTCCATTCATTTTTTATTTTTTGGAGCACAACTTTGTG
TGAGGATGCTGTTGTGTTTTCGTTGAATGCCGTACCCCACGATACCGGGA
GTGCGCAAGTTCGTCCAAGGGTGTGCTTTGGGTCCACCCTCACCTTGTCC
GAGTACTCCCGTCGCCCGTCTTTTGCCCAATCGTTGACGAAACAAATTTC
GGTGGACACGGGCCGTACGAAGTGTCAGTGTGTGGTATTCAACCCTAACA
CTACAACGAGACCCTGACGTAGCGCCTGATGTCCTCTCCACTTGTGTTTT
GCCTAACTGCCGTTATACCTCATTGTTCGCCTTCTGTCCGTTGTGTCCGC
CGTGCGTGCGACTGGGAGTAGGAGCAGCTGCCCTCGATCGTCACCAGCAT
CCTCGTGCACCTGTTCGCCTGCTGCCGCGCCGAGGTGGACAAGAGGCTGA
CAGCCAGAGTCGACGGCCTCCGGACCTTCCTTGGAGGGGGAGAGGTCGTG
CAGCTCGGGAGCGGCGCCGACGGCGGTGGGCTCGAGGCGGGCGGGCCCAA
GGCGTCTCTGGCGGTGGCGGCGGCAGGATCGACATCGGGGACGCCAGTCG
GGATGGCCCCCGACACTAAGGAGCTTCTGTACAGTGAGCTGAGGCGGCGT
CACAAAACCATCTCCGGCATCGGGAGGAAAGACCTGGTGGTCCTGTCCGC
GCGGGTGTTATCCCGCGCGCTGAAAACTGAGGAAAGGAAGGGATTCGGGC
GAATGCTGGTGCACCTGACGTGGTCGACGTTCGAGCCAGTGGTTAGGTCC
TACCTCGCACTGTTTGTGGAGGTCAGTGGGATTGGAACGGTGGGATGGTG
GTGTGGGGGGCTGGATCGAATAGGGTCGATATCGATCGATGACAATTAGA
AAGTCTAACGAGGGGAAGTTTTCTGTTTCTGACGGAGGCCACATGCGCGT
ATGTCCCGACCTAAGCACGGTGTCCATTTCTAGCGCCAGTCATAACTGTG
TTCGATTGGTGTACTCGAAACGTGGGTATCGTAGTTGTGCAAGTGATCGT
ACCCCTCTTAGACCGATCCACAATTGGCAGTGCCCGAATAGAACACGATA
CCTCTAAGGAAATCCCCGACGAGAATTTCAAAGCGACGATTTTCGCCATA
AGCGCCCTGGTGGTCGTGCAGGAATCGAGGTTTGAAAGGCGGTCTAGGGG
TGTGCGATCACTCGCACAGTACTACGCTATTCAACTCCGAGCTACGCTCT
GGTTTGCCGCCCCCTATGCTCGCTTTTGGTCGGAACTTGATATTTCGAAC
CATCCGCCCGTCGAGAGAACGCCGTGGGGTGAATTTGGCTTGCAATTAGG
AACCTTAGCCCTTGCCTTTCCCGCTACCCGTGACCAGTTGCTTTATCGGG
GTTCAAAGGCTGGCTCAGGGCGATATTTTGTACCTCCTAGGCCGACCGCG
CGGTTCGTCTCGCACCCTAATACACTCGCCGTTGTGCATTGGATGCATTT
TAGGTCACTGCGCATGGGCTAGTAACTACGTGACCTGTAGACACATCAAT
CAACGGGACGACTTTCCCCGAAGACCGAAAGCTGATTCAGAATCATTCCC
GAAGCAGACTGCCTAAAGGGTCGAAAAAGACAATATTTGAGCGAATCTTT
ATTGTTCCCATGAGAACCGTTGTGAGTTGGTTTCTTTCGATACGGGTCAG
GTCTTGACGTAGTCGCAGATGCGTGTTCTGTTGCCCACCGGGAGCACCAA
TGCAAAGCGACGTCAGTATCAAACTGCCGCTCCTTTACCATACCCCTTGC
TGCGTTCGTGGTGATGAGGGATGCTGCTGCTGTTGCCCACGTTGTCGTGG
TGGCTTTTTTCGTCGCCCTTTTTTTCGTGACGTTCCTTGACGCTGACAAA
TCATGCGACTATCAGAGAGGAGACACGTCTCTTTCCCCCTCCACTACCCC
TCCCCGTCCCCGTCCATCCACCCCTCCTCCCAACAACACCTTTCAGAGTG
CCCTGCAGCAGCCTCAGATCGAATTCGAAGACGCGGCGGGCAAGGAGGAG
TTGTTCGATCGAGAGAAACATCGCGAGCTGGCGAGGTTTTCCCGAATTGG
TTCTCCCGACGGCGGCACTCCCGATGTGTCTGTGGCGGGACCGGGTCTAC
CGCTCGAATCGAACTACCACTTCCAAGGCTTGGTCGGCCAACCGGACGAC
GGTAGTGGAGATGAAGGTGGCGTGGACAACACGAGCTCAAGGACCTGCTG
CGTCGTGTTTCCGGCCGTATACGCGAGCATTGCGAGGTGGCCCCCCTCGG
AGGCGGCCATGAGCGGGGTGATCGTTTACTGAGGTCGAGGTTGAAGCAGG
GTTTTCAAGTGCAGTGAAGGCTTGAAGGTGTTCGGTGACGTTAGCGAAGT
CGAGGTTCTGGCGATCCTTTATGTTCCCGGGAGGTGCTCGATATTTGGGC
ATCGTTTGGTCATCGTCGATCTTCTTCGGGTGCGGCCGGGGAAACGAATG
GCCCGTTCCTGGGTTCGAATTTCACCACGGGCAATGAATAGAATTGGTTC
GTCCGACCTGTTGATATATGTGCTGAGCTGACGCCCAGCGATTGCCTCAC
TTTGATATGATGCTGATGCTCAGCCATTTGTAAAGAGACGTTTTGGAGCC
AGATGCTTTGTAGGAAATCCGCGTAGGTGGTCAATGAGAATTTGTAACTT
CGTCAACAAGAGCACGTTGATGACGCAGATGAACTTGAAACGTGTCTATC
AGGGATGCTTTTCTGTCGGCATCGGGTGAACAACATTTCCAACCTTGGCT
TCTTCGGGGGTTTTTGCGCCTATTCAGGGAGAAAACGAAACAAATACGAC
GGTCAGATTCGAAGATTTTTTTTTGCGTGCTTTGCTTTAACGACGCTTCT
GGTGGTGCTGTCCTTGTCCGGGCTCATCTGCGTGTTGGGGGTAAAATAGA
TGCTCGTTTTGTTTTTTTTGTCGTCGCCTCTGCATTTGCAGACTATCGCG
TCTGATTTATGCAGACGTGCAGCTGTCTCTGTATTCAATGAGAATGGGCG
GTGCAGTGTACCACACGCCGTCTTGGAGTTTTTGTTCATCCGATATTGTT
GGGATACAAGCACTGAATTGGATTTTACTTCGTAGTGTTTCTTTGGGCCA
GGTGGAGACACCTGAACTTGTCGGATTTCCGCAAATTTTGCTTCCCATCT
TAATGGGGCGTGAATCGAGTGGAAACTGGCGTGTCCCAGTTGTTTTGGTG
GCTAGTTTTTCATTGGGCACACAGGTGGGGTCGTTATGGATACAGCTGTT
GGCAACGTACAAGAAAAACGGGTTGTCTTGTGAATTTTCCCCTACTTTTC
AGGGTGGTAGCCGTGTGTTTTTTATGGCGGGGAATTTGGAATCGAGTCCA
AGGCACAACATGTAACTTTTTTCATGTCCGTCAATCGCAGCGTAGGCGAG
TGAGAGTTAAATGCATCAGCCGACCCAAAGGGACTTTCCATACATATAGG
AAGTCAAATAGGCGGCTTGTGTCACTTTAACCGTCACTGTGAAGACTTGG
ACATCAACCACATGCAGGGGACTTCTCATTAAAATATCTCAGCTAGACAC
CATCATTGCTTGCCACGGAAAATCGCACGATGATTATTTAGTTGTGACAG
CTGTGTGAGCTCTACCAACGCAAAGGTTGGATCGGAGACCGGAGACAGAC
ATGTATCTAGACAGCGGGCGGCGGCGGCGTCGCATGGATGCAGGAAAGGA
GGGGAAGCCCGCAAATAATTTTTATGTAGTAAATGACCCGTTTATGTGTT
ACTGTCTGTCGTTGAGGTGCTTGTGCGATAGCCCGTGGCGTACCACTCTC
AGGTTGCTGTCAGGGTTGCGGCAGCGAATGGTGGAGATTTGGAGTGGTGT
GGTGATACCTTCCCCACTTCCGCCCCTTCCAGATGTGTAGGCTCGATTTT
TGCCGAAATGTTTGTTTTTCGATGTAGGCTGGTATCCTGGAGAGGGGGGA
GGCTGTGTGACCTTAGTGGCCCTTTGTCGTTTTTGTCGTCAGTATTGGCG
GCCGTGGTGGGTGAGACAGACCTTTAAGTGTCTTTCTCTCTGGCTTTCAT
TTGGAAGGGTTCGATTGCACCATTCGTCGGCTGCATCTTCTATCGCTCGC
AATTCGCGTGTGATTTGATAGTTTGCCAAATCGACGGGCGCAAGCCGTCG
GTGGTGGGAGTGAAGTGAGTGTGTTGCGGTAATGTCAAGTGTATGGTGAG
TTGTTTGGAGAGGTTTGGAGCGAAGGTTGGAAGAGTGAGGCGCAATATCG
AAGCGAACG back to topCoding sequence (CDS) from alignment at P-lacustris_contig122:160331..172839+ >mRNA_P-lacustris_contig122.1647.1 ID=mRNA_P-lacustris_contig122.1647.1|Name=mRNA_P-lacustris_contig122.1647.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2334bp|location=Sequence derived from alignment at P-lacustris_contig122:160331..172839+ (Pleurocladia lacustris SAG_25_93)
ATGCACGCCCACATCGATTGGAGGAGGGGGGGCGGCGGCTCTCCCTTGAC
GCATCTGGCTTCACCGAGGTCACACTTCGGCAGTGCCAGCGATATGGGCA
CGCCCTCTAGGGCAGGAGCCGGGCTGTGCAAGCGCTTGCACTATGTCGGA
AACGCCGCTAGCATGCACCCTGGATCTTCCCGGGGCCACCGGTTGACTCA
CTCGTCGCACCACAAGTTTCCGAGCGCACGGGCTGTGGAGGCACACGCGC
TAGAGGCTTCGGCAAATGCAGCGAAGTGGGCCCGGAGTGCGATGACGAGG
GCGGCCGCAGGTTTCGGTGGTGGCGACGGAGAGGGCAAAGTGGAACAACA
ATATCTTTTGGTGAGTAGAGGCACGAGCCGTGGAATGATGCACGCCCACA
TCGATTGGAGGAGGGGGGGCGGCGGCTCTCCCTTGACGCATCTGGCTTCA
CCGAGGTCACACTTCGGCAGTGCCAGCGATATGGGCACGCCCTCTAGGGC
AGGAGCCGGGCTGTGCAAGCGCTTGCACTATGTCGGAAACGCCGCTAGCA
TGCACCCTGGATCTTCCCGGGGCCACCGGTTGACTCACTCGTCGCACCAC
AAGTTTCCGAGCGCACGGGCTGTGGAGGCACACGCGCTAGAGGCTTCGGC
AAATGCAGCGAAGTGGGCCCGGAGTGCGATGACGAGGGCGGCCGCAGGTT
TCGGTGGTGGCGACGGAGAGGGCAAAGTGGAACAACAATATCTTTTGGTG
AGTAGAGGCACGAGCCGTGGAATGCTGCCCTCGATCGTCACCAGCATCCT
CGTGCACCTGTTCGCCTGCTGCCGCGCCGAGGTGGACAAGAGGCTGACAG
CCAGAGTCGACGGCCTCCGGACCTTCCTTGGAGGGGGAGAGGTCGTGCAG
CTCGGGAGCGGCGCCGACGGCGGTGGGCTCGAGGCGGGCGGGCCCAAGGC
GTCTCTGGCGGTGGCGGCGGCAGGATCGACATCGGGGACGCCAGTCGGGA
TGGCCCCCGACACTAAGGAGCTTCTGTACAGTGAGCTGAGGCGGCGTCAC
AAAACCATCTCCGGCATCGGGAGGAAAGACCTGGTGGTCCTGTCCGCGCG
GGTGTTATCCCGCGCGCTGAAAACTGAGGAAAGGAAGGGATTCGGGCGAA
TGCTGGTGCACCTGACGTGGTCGACGTTCGAGCCAGTGGTTAGGTCCTAC
CTCGCACTGTTTGTGGAGCTGCCCTCGATCGTCACCAGCATCCTCGTGCA
CCTGTTCGCCTGCTGCCGCGCCGAGGTGGACAAGAGGCTGACAGCCAGAG
TCGACGGCCTCCGGACCTTCCTTGGAGGGGGAGAGGTCGTGCAGCTCGGG
AGCGGCGCCGACGGCGGTGGGCTCGAGGCGGGCGGGCCCAAGGCGTCTCT
GGCGGTGGCGGCGGCAGGATCGACATCGGGGACGCCAGTCGGGATGGCCC
CCGACACTAAGGAGCTTCTGTACAGTGAGCTGAGGCGGCGTCACAAAACC
ATCTCCGGCATCGGGAGGAAAGACCTGGTGGTCCTGTCCGCGCGGGTGTT
ATCCCGCGCGCTGAAAACTGAGGAAAGGAAGGGATTCGGGCGAATGCTGG
TGCACCTGACGTGGTCGACGTTCGAGCCAGTGGTTAGGTCCTACCTCGCA
CTGTTTGTGGAGAGTGCCCTGCAGCAGCCTCAGATCGAATTCGAAGACGC
GGCGGGCAAGGAGGAGTTGTTCGATCGAGAGAAACATCGCGAGCTGGCGA
GGTTTTCCCGAATTGGTTCTCCCGACGGCGGCACTCCCGATGTGTCTGTG
GCGGGACCGGGTCTACCGCTCGAATCGAACTACCACTTCCAAGGCTTGGT
CGGCCAACCGGACGACGGTAGTGGAGATGAAGGTGGCGTGGACAACACGA
GCTCAAGGACCTGCTGCGTCGTGTTTCCGGCCGTATACGCGAGCATTGCG
AGGTGGCCCCCCTCGGAGGCGGCCATGAGCGGGGTGATCGTTTACTGAAG
TGCCCTGCAGCAGCCTCAGATCGAATTCGAAGACGCGGCGGGCAAGGAGG
AGTTGTTCGATCGAGAGAAACATCGCGAGCTGGCGAGGTTTTCCCGAATT
GGTTCTCCCGACGGCGGCACTCCCGATGTGTCTGTGGCGGGACCGGGTCT
ACCGCTCGAATCGAACTACCACTTCCAAGGCTTGGTCGGCCAACCGGACG
ACGGTAGTGGAGATGAAGGTGGCGTGGACAACACGAGCTCAAGGACCTGC
TGCGTCGTGTTTCCGGCCGTATACGCGAGCATTGCGAGGTGGCCCCCCTC
GGAGGCGGCCATGAGCGGGGTGATCGTTTACTGA back to top
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