mRNA_P-lacustris_contig122.1645.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig122.1645.1 vs. uniprot
Match: D7FMM2_ECTSI (GE20757 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM2_ECTSI) HSP 1 Score: 497 bits (1280), Expect = 2.500e-176 Identity = 237/277 (85.56%), Postives = 253/277 (91.34%), Query Frame = 1
Query: 1 AGVIGGANLVGFGITATTKTHKLTDLTGAGAFVLSAAACAWKSGSFRSGAVRPLLLNIAVGVWGARLASYLFARIIKTGEDQRLSRFFPSKGERWLDSARSFFPANLAGFWTIQALWAWVVSLPVTLVNFAPTRAVPMGPGGWVCLGLAAGGLTLETVADYQKFQFKNDPANKGKFMASGLWGLSRHPNYLGEMGVWWALLGVALPALRWVGGASKVALGLTSPVFVTALIMYVSGVPLLEQQHDEKYGDDPRYREWKENTPMIVPDLSKIWRSVFF 831
AGVIGGANL+GFG+TATTKTHK+TDLTGAGAFVLSAAACAWKSGSFRSGA+RPLLLN+AVGVWG RLASYLFARIIKTGEDQRL+RFFP K E WLDSARS FP NLAGFWTIQA+WAWVVSLPVTL NF+P RAVPMG GGW CLGLAA GL +ETVADYQKFQFKNDP NKGKFM SGLW LSRHPNYLGEMGVWWA+LGVALPALR G +VALG SP F+TALIMYVSGVP+LEQQHDEKYG DPRYREWKENTPMI+PD+SK+WRSVFF
Sbjct: 42 AGVIGGANLIGFGVTATTKTHKVTDLTGAGAFVLSAAACAWKSGSFRSGAIRPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARFFPGKDEGWLDSARSLFPVNLAGFWTIQAMWAWVVSLPVTLANFSPARAVPMGVGGWACLGLAATGLAVETVADYQKFQFKNDPDNKGKFMTSGLWSLSRHPNYLGEMGVWWAILGVALPALR---GPGRVALGFASPAFITALIMYVSGVPMLEQQHDEKYGGDPRYREWKENTPMILPDMSKVWRSVFF 315
BLAST of mRNA_P-lacustris_contig122.1645.1 vs. uniprot
Match: A0A835Z1P4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P4_9STRA) HSP 1 Score: 290 bits (741), Expect = 1.560e-94 Identity = 144/267 (53.93%), Postives = 189/267 (70.79%), Query Frame = 1
Query: 1 AGVIGGANLVGFGITATTKTHKLTDLTGAGAFVLSAAACAWKSGSFRSGAVRPLLLNIAVGVWGARLASYLFARIIKTGEDQRLSRFFPSKGERWLDSARSFFPANLAGFWTIQALWAWVVSLPVTLVNFAPTRAVP-MGPGGWVCLGLAAGGLTLETVADYQKFQFKNDPANKGKFMASGLWGLSRHPNYLGEMGVWWALLGVALPALRWVGGASKVALGLTSPVFVTALIMYVSGVPLLEQQHDEKYGDDPRYREWKENTPMIVP 798
A +IGG NL+GF ITA TKTHKLTDL G GAFV SAAA A+ +G RP +L+ AV +WG RLA +LF RI+ + +D RL +F P KGE+WLDS+ S FP NLAGFW IQA WAWVVSLPVT+ NF P + +G GG V L AGG E +AD+QK FK +PANKGK++ G+W +SRHPNY GE+ +W +L ++PALR G +V +G SP+F++ LI+YVSG+PLLE + ++ +G D +Y ++KE TP++VP
Sbjct: 30 AAIIGGINLLGFSITAATKTHKLTDLFGTGAFVASAAASAYVNGVHAHPWSRPFILSAAVSIWGIRLAGHLFERILTSPKDPRLEKFMPKKGEKWLDSSGSNFPLNLAGFWMIQAAWAWVVSLPVTMANFNPVASTQRLGMGGRVALLTFAGGFAFEAIADWQKRSFKKNPANKGKWIDQGVWSVSRHPNYFGELLIWSSLFFASVPALR---GPRQVLIGAVSPLFISGLILYVSGIPLLEDKMNKDHGQDEKYLKYKETTPLLVP 293
BLAST of mRNA_P-lacustris_contig122.1645.1 vs. uniprot
Match: A0A6S9K4Z3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K4Z3_HETAK) HSP 1 Score: 254 bits (650), Expect = 1.620e-80 Identity = 133/278 (47.84%), Postives = 173/278 (62.23%), Query Frame = 1
Query: 4 GVIGGANLVGFGITATTKTHKLTDLTGAGAFVLSAAACAWKS---GSFRSGAVRPLLLNIAVGVWGARLASYLFARIIKTGEDQRLSRFFPSKGERWLDSARSFFPANLAGFWTIQALWAWVVSLPVTLVNF----------APTRAVPMGPGGWVCLGLAAGGLTLETVADYQKFQFKNDPANKGKFMASGLWGLSRHPNYLGEMGVWWALLGVALPALRWVGGASKVALGLTSPVFVTALIMYVSGVPLLEQQHDEKYGDDPRYREWKENTPMIVP 798
GVIGG NL GF +TA +THKLTDL GAG+FV SA CA ++ G + +R LL AV WG RLA YLF R++ G D RL F+P +GE W + +SF+P L+GFW IQA W W+VS PVTL F A +G GG + L GGL LE VAD QK+ FK NKGK++ +G+W SRHPNY GE VWW LLG+A P LR G ++ALGL SP+F T L+ VSG+P+LE+++D +Y + Y+ +K T +++P
Sbjct: 21 GVIGGLNLAGFAVTAALETHKLTDLVGAGSFVASAVLCARRAAGPGGVGALPLRAALLAGAVAAWGTRLAGYLFRRVLYVGGDDRLDSFYPEEGEGWFNWEKSFYPVKLSGFWVIQAAWGWLVSAPVTLAIFNAASPNAGAAQAAAARRLGWGGALSLAAFVGGLLLEWVADQQKWVFKKKEENKGKWIETGVWRYSRHPNYFGETAVWWGLLGLAAPLLR---GPGQLALGLASPLFTTLLLTQVSGIPMLEKKYDARYANSAEYQAYKARTNVLIP 295
BLAST of mRNA_P-lacustris_contig122.1645.1 vs. uniprot
Match: A0A7S3GPN7_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GPN7_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.660e-68 Identity = 123/296 (41.55%), Postives = 178/296 (60.14%), Query Frame = 1
Query: 7 VIGGANLVGFGITATTKTHKLTDLTGAGAFVLSAAACAWKSG--SFRSGAV---RPLLLNIAVGVWGARLASYLFARIIKTGEDQRLSRFFPSKGERWLDSARSFFPANLAGFWTIQALWAWVVSLPVTLVNFAPTRAVPMGPGGWVCLGLAAG----------------GLTLETVADYQKFQFKNDPANKGKFMASGLWGLSRHPNYLGEMGVWWAL----LGVALPALRWVGGASKV------ALGLTSPVFVTALIMYVSGVPLLEQQHDEKYGDDPRYREWKENTPMIVPD 801
++GG N VG+G+TA +THKLTDL GAG+FV + A ++K+G + +SG V + LL+N+ V +WG+RLAS+LF+R++K GED+RL +FF GE +LD SFFP LA FWTIQA W ++ LPVTL N P GP L A G G+ +E +AD+QK F+ + N G + GLW +S++PNY GE+ WW++ L LPA GA+ A+ L SPVF+T L+ +SG+PLLE++H +Y + +Y E+ TP+++P+
Sbjct: 14 IVGGCNAVGYGLTAAFETHKLTDLVGAGSFVAATLAMSYKNGLLNLKSGGVMHPKLLLVNVGVILWGSRLASFLFSRVLKVGEDKRLQKFFRKPGEAYLDIKASFFPVRLATFWTIQAAWGFICLLPVTLYNSVPLMLSNGGPNPQFLLKSAHGPVATLLTVLPVAGIFLGVGIEALADWQKNTFRENKKNDGHWCDVGLWRMSKYPNYFGELLTWWSVYFSCLPALLPAAAGASGAAGTMFTAAPAVALLSPVFITFLLFKLSGIPLLEKKHSAEYKGNKQYEEYVRITPLLIPN 309
BLAST of mRNA_P-lacustris_contig122.1645.1 vs. uniprot
Match: A0A7S3YEU5_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YEU5_9EUKA) HSP 1 Score: 221 bits (562), Expect = 9.840e-68 Identity = 131/288 (45.49%), Postives = 170/288 (59.03%), Query Frame = 1
Query: 10 IGGANLVGFGITATTKTHKLTDLTGAGAFVLSAAAC----AWKSGSFRSGAVRPLLLNIAVGVWGARLASYLFARIIKTGEDQRLSRFFPSKGERWLDSARSFFPANLAGFWTIQALWAWVVSLPVTLVNFA---PTRAVPMGPGGWVCLGLAAG------GLTLETVADYQKFQFKNDPAN--KGKFMASGLWGLSRHPNYLGEMGVWWALLGVALP-ALRWVGGASKVALGLTSPVFVTALIMYVSGVPLLEQQHDEKYGDDPRYREWKENTPMIVPDLSKIWRSV 825
+GG NL GF TA T THKLTD+TG AF +SA A A K G S + RP++L++ V W ARL YLF RI K+ ED RL F +GE L + S FP L FW+IQALWAW LPVT+ A P + + P L L G G +ET+AD QK QFKND N + K+ GLW +SR+PNYLGEM VWW+L +A P A W + SPVFVT L+ VSG+PL+E+++D KYG++ Y+++K TPM+VP L+ I + +
Sbjct: 5 VGGWNLAGFTATALTGTHKLTDITGTSAFAVSALASLGLLASKRGLKASLSPRPIMLSVCVTAWAARLGGYLFDRIRKSHEDPRLKYMFRKEGEPML-TGPSAFPLKLLNFWSIQALWAWTSMLPVTMAIAAAGDPKKVMRTAPRSISSLALGIGFVGFSTGFLVETLADSQKSQFKNDVTNPRRDKWCDQGLWSISRYPNYLGEMTVWWSLFVMANPLAPAWT---------VASPVFVTFLLTRVSGIPLIEKRYDSKYGNEEEYKQYKAKTPMLVPHLASIMKYI 282
BLAST of mRNA_P-lacustris_contig122.1645.1 vs. uniprot
Match: A0A0G4GWI8_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GWI8_9ALVE) HSP 1 Score: 218 bits (554), Expect = 1.190e-65 Identity = 112/278 (40.29%), Postives = 169/278 (60.79%), Query Frame = 1
Query: 16 GANLVGFGITATTKTHKLTDLTGAGAFVLSAAACAWKSGSFRSGAVRPLLLNIAVGVWGARLASYLFARIIKTGEDQRLSRFFPSKGERWLDSARSFFPANLAGFWTIQALWAWVVSLPVTLVNF------APTRAVPMGPGGWVCLGLAAGGLTLETVADYQKFQFKNDPANKGKFMASGLWGLSRHPNYLGEMGVWWALLGVALPALR---WVGGASKVALGLTSPVFVTALIMYVSGVPLLEQQHDEKYGDDPRYREWKENTPMIVPDLSKIWRS 822
GAN +G+ IT T THK+TDL G G+FV +A A W++G + R LL+ A+ WG RLAS+LFAR++K G+D RL F P + GFWTIQA WAW+ +P TL+ + A + A+ +GP + + GG+ E+VAD+QK++ + DP+ KG F +GLW L R PNY GE+ WW +ALP L W G ALG+ SP+++ L+++VSG+PL E+ +++KYG Y+++K++TP+++P +S ++S
Sbjct: 92 GANSIGYLITRLTDTHKITDLVGTGSFVATALATQWRTGVYTP---RALLMTGAISFWGTRLASFLFARVLKQGDDARLGAVFKK-------------PGGMEGFWTIQAAWAWICMVPHTLLLYGAKSMAAGSAAMALGPLDAIAATIMIGGIVFESVADWQKWKHRFDPSKKGTFCKTGLWSLCRQPNYFGELCTWWGGYFLALPGLLAGPW--GWKAAALGVVSPLWIQFLLLFVSGIPLSEKGNEKKYGQMEEYKQYKKDTPLLIPKISNAFKS 351
BLAST of mRNA_P-lacustris_contig122.1645.1 vs. uniprot
Match: I0YVW6_COCSC (DUF1295-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YVW6_COCSC) HSP 1 Score: 209 bits (531), Expect = 4.340e-63 Identity = 119/270 (44.07%), Postives = 164/270 (60.74%), Query Frame = 1
Query: 7 VIGGANLVGFGITATTKTHKLTDLTGAGAFVLSA-----AACAWKSGSFRSGAVRPLLLNIAVGVWGARLASYLFARIIKTGEDQRLSRFFPSKGERWLDSARSFFPANLAGFWTIQALWAWVVSLPVTLVNFAPTRAVPMGPGGWVCLGLAAGGLTLETVADYQKFQFKNDPANKGKFMASGLWGLSRHPNYLGEMGVWWALLGVALPALRWVGGA-SKVALGLTSPVFVTALIMYVSGVPLLEQQHDEKYGDDPRYREWKENTPMIVP 798
VI G N GF +TA T++HK+TDLTG AF+ SA AAC + + + L L AV +WG RLA YLF R+++TG+D RL+ FP L + RS +P LAGFWT Q+LW W+V LP+T V+ T A P+GP GW+ G +ETVAD QKF FK+ A+ KFM SGL+ L RHPNY GE+ +W +L L G +K + SP F L++YVSG+P LE+ H+++YG D Y+++K +T +++P
Sbjct: 16 VIVGFNTAGFAVTAVTRSHKITDLTGTTAFIASAWATHAAACHMHNLRLFQPS-KSLFLAGAVTLWGTRLAGYLFWRVLQTGKDARLNFLFPRDESEPLLTGRSMYPIKLAGFWTAQSLWGWIVLLPIT-VSQTLTPAAPLGPLGWIAAAGFLAGFAIETVADLQKFYFKS--AHPDKFMDSGLFALCRHPNYFGEILLW-----TSLTVLAGTHGVFAKHPWIIASPAFTIFLLLYVSGIPTLEKSHEKRYGKDAAYKDYKASTNLLLP 276
BLAST of mRNA_P-lacustris_contig122.1645.1 vs. uniprot
Match: A0A6U4M307_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4M307_HEMAN) HSP 1 Score: 208 bits (529), Expect = 1.200e-62 Identity = 119/275 (43.27%), Postives = 159/275 (57.82%), Query Frame = 1
Query: 1 AGVIGGANLVGFGITATTKTHKLTDLTGAGAFVLSA-AACAWKSGSFRSGA------VRPLLLNIAVGVWGARLASYLFARIIKTGEDQRLSRFFPSKGERWLDSARSFFPANLAGFWTIQALWAWVVSLPVTLVNFAPTRAVPMGPGGWVCLGLAAGGLTLETVADYQKFQFKN-DPANKGKFMASGLWGLSRHPNYLGEMGVWWALLGVALPAL-RWVGGASKVALGLTSPVFVTALIMYVSGVPLLEQQHDEKYGDDPRYREWKENTPMIVP 798
A V+GG N+ GF TA T THKL D+TG G+FV+S+ A CA FR + +RP++L AVG WG RLAS+L RII++ +D+R FFP GE P LAGFW +QA W +V LPVTL P+GP + + A G E +AD+QK FK ANK ++ GLW SRHPNY GEM VWW+L A A+ RW + SP+ V L+++VSGVPL+E+++D KY + Y+ +K +T +IVP
Sbjct: 31 AAVVGGLNVAGFVATAATGTHKLIDITGTGSFVVSSLATCAVCLSHFRKVSPGKPLPLRPIVLTAAVGFWGTRLASFLLYRIIQSPQDKRFDDFFPKPGE---------LPVKLAGFWAVQATWGFVCLLPVTLACRRAAAVAPVGPAFYAAMSAFACGFLCEAIADHQKMNFKAASDANKERWCDVGLWQYSRHPNYFGEMVVWWSLWAAAGRAVPRW---------SVASPLMVCGLLLFVSGVPLIEKKYDAKYAKNAEYQRYKSSTNLIVP 287
BLAST of mRNA_P-lacustris_contig122.1645.1 vs. uniprot
Match: A0A8J9S1B4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S1B4_9CHLO) HSP 1 Score: 208 bits (529), Expect = 1.440e-62 Identity = 126/276 (45.65%), Postives = 164/276 (59.42%), Query Frame = 1
Query: 7 VIGGANLVGFGITATTKTHKLTDLTGAGAFVLSA-----AAC-AWKSGSFRSGAVRPLLLNIAVGVWGARLASYLFARIIKTGEDQRLSRFFPSKGERWLDSARSFFPANLAGFWTIQALWAWVVSLPVTL-VNFAPTRAVPMGPGGWVCLGLAAGGLTLETVADYQKFQFKNDPANKGKFMASGLWGLSRHPNYLGEMGVWWALLGVA-----LPALRWVGGASKVALGLTSPVFVTALIMYVSGVPLLEQQHDEKYGDDPRYREWKENTPMIVP 798
VI G N GF ITA T++HK+TDLTG AFV SA A C A F+ + L L AV +WGARLA YLF R+++TG+D RL+ FP + L + RS +P LAGFWT Q+LW W+V LPVT+ AP AV +GP GW+ G ET+AD QKFQFK AN KFM SGL+ L RHPNY GE+ +W +L +A L W+ L SP F L++YVSG+P LE H+++YG D Y+ +K +T +++P
Sbjct: 37 VIAGFNTAGFAITAVTRSHKITDLTGTTAFVASAWATHAATCEAHNLRLFQPS--KSLFLAGAVTLWGARLAGYLFYRVLQTGKDARLNFLFPKDEKEPLLTGRSMYPIKLAGFWTAQSLWGWIVLLPVTVGQTLAP--AVALGPVGWLAAAGFITGFAFETIADLQKFQFKT--ANPDKFMDSGLFALCRHPNYFGEILLWSSLTVLAGTHGVLAKHPWI---------LASPAFTIFLLVYVSGIPPLEISHEKRYGKDAAYKRYKASTNLLLP 297
BLAST of mRNA_P-lacustris_contig122.1645.1 vs. uniprot
Match: A0A0G4EDP8_VITBC (S5A_REDUCTASE domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EDP8_VITBC) HSP 1 Score: 208 bits (529), Expect = 7.880e-62 Identity = 125/286 (43.71%), Postives = 167/286 (58.39%), Query Frame = 1
Query: 16 GANLVGFGITATTKTHKLTDLTGAGAFVLSAAACAWKSGSFRSGAV------RPLLLNIAVGVWGARLASYLFARIIKTGEDQRLSRFFPSKGERWLDSARSFFPANLAGFWTIQALWAWVVSLPVTLVNFAPTRAVPMGPGGWVCLGLA--AGGLTLETVADYQKFQFKN----DPANKGK------FMASGLWGLSRHPNYLGEMGVWWALLGVALPALRWVGGASKVALGLTSPVFVTALIMYVSGVPLLEQQHDEKYGDDPRYREWKENTPMIVPDLSKIWR 819
G N +GF I+A T T K+TDL G G FVL+A SFRS V RP L AV +WG RLAS+LF RI+KTGED RL+ F S G LA FWT Q +W W+ LP T+ ++ W G+A + G ET+AD QK+ K A KGK +M GLW L R+PNY GE+ VW L VA+PAL G VALG SP FV++L+++VSGVPL E++ D+++GDDP+Y+E+K++TP+I+PDL+K+++
Sbjct: 98 GVNGLGFAISAITGTQKITDLFGTGCFVLTAL------NSFRSAGVPIDIASRPAFLTAAVSLWGTRLASFLFNRILKTGEDTRLTDQFQSTG-------------GLAAFWTAQTVWCWLSLLPSTVAVYSKAAT---SLTRWDAFGIALFSLGFAFETIADNQKWAKKQREMKGEAAKGKGDKAAKWMDEGLWRLCRYPNYFGEICVWSGLYAVAVPALYQAYGPKMVALGALSPAFVSSLLLFVSGVPLAEKRADKRFGDDPQYQEYKKSTPLIIPDLTKVFK 361 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig122.1645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig122.1645.1 >prot_P-lacustris_contig122.1645.1 ID=prot_P-lacustris_contig122.1645.1|Name=mRNA_P-lacustris_contig122.1645.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=278bp AGVIGGANLVGFGITATTKTHKLTDLTGAGAFVLSAAACAWKSGSFRSGAback to top mRNA from alignment at P-lacustris_contig122:129503..138820- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig122.1645.1 ID=mRNA_P-lacustris_contig122.1645.1|Name=mRNA_P-lacustris_contig122.1645.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=9318bp|location=Sequence derived from alignment at P-lacustris_contig122:129503..138820- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig122:129503..138820- >mRNA_P-lacustris_contig122.1645.1 ID=mRNA_P-lacustris_contig122.1645.1|Name=mRNA_P-lacustris_contig122.1645.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1668bp|location=Sequence derived from alignment at P-lacustris_contig122:129503..138820- (Pleurocladia lacustris SAG_25_93)back to top |