mRNA_P-lacustris_contig1219.1639.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1219.1639.1
Unique NamemRNA_P-lacustris_contig1219.1639.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig1219.1639.1 vs. uniprot
Match: D8LPN3_ECTSI (Amine oxidase n=8 Tax=Phaeophyceae TaxID=2870 RepID=D8LPN3_ECTSI)

HSP 1 Score: 1033 bits (2671), Expect = 0.000e+0
Identity = 521/562 (92.70%), Postives = 537/562 (95.55%), Query Frame = 1
Query:    1 IMSARDGAFLALALALTGKTASAF-LPPSTGFAGWGLTNAGPQSTTRKNRALSMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFVDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPLVLEARDVLGGKVAAWQDKDGDWVETGVHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMKQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLALPDAWRSMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDNKSMLELVFAPAKDWIGKPDEAIIEATMEELYRLFPNELKKDGSGAKLLKSAVVKTPLSVYEATAGREMYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAIKGTV 1683
            ++ A  GAFLALALA  GKT SAF LPP+T F G GL+ +  QS  R+N   SMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAF+DMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKP+VLEARDVLGGKVAAWQDKDGDWVETG+HIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRM+QRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVD+LKLALP+AWR MPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDD+KSMLELVFAPAKDWIGK DE IIEATM ELYRLFPNEL KDGSGAKLLKSAVVKTPLSVYEATAGRE+YRPVQT+P+SNFFLAGCFTKQKYLASMEGATFSGKLAARAL DAAI GTV
Sbjct:    1 MVGAGGGAFLALALA--GKTISAFVLPPATSFTGVGLSGSARQSAIRRNGVSSMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFLDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPVVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMEQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDILKLALPEAWRPMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKDWIGKSDEDIIEATMGELYRLFPNELSKDGSGAKLLKSAVVKTPLSVYEATAGRELYRPVQTTPVSNFFLAGCFTKQKYLASMEGATFSGKLAARALCDAAIAGTV 560          
BLAST of mRNA_P-lacustris_contig1219.1639.1 vs. uniprot
Match: A0A2H4YKJ4_SACJA (Amine oxidase n=2 Tax=Laminariales TaxID=2886 RepID=A0A2H4YKJ4_SACJA)

HSP 1 Score: 991 bits (2561), Expect = 0.000e+0
Identity = 500/562 (88.97%), Postives = 522/562 (92.88%), Query Frame = 1
Query:    1 IMSARDGAFLALALALTGKTASAFLPPS-TGFAGWGLTNAGPQSTTRKNRALSMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFVDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPLVLEARDVLGGKVAAWQDKDGDWVETGVHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMKQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLALPDAWRSMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDNKSMLELVFAPAKDWIGKPDEAIIEATMEELYRLFPNELKKDGSGAKLLKSAVVKTPLSVYEATAGREMYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAIKGTV 1683
            +M  R  AF+ L LA  GK A AF+P S T F G      G QS   K    SMIFD+PAPG RKDYPRPPLEETS+NQR+SAAFSQ F+DMPRPERPLKVAVIGAGLAGLSCAKYLSDAGH+P+VLEARDVLGGKVAAWQDKDGDW+ETG+HIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFP LLPAPLNGLVAILLNNEMLTFPEKIQFGIGL+PAILFGQKYVEECDSLTV++WM KQGVPDRVNDEVFIAMAKALNFIDP+NLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRM+QRIS++LLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKL LPD WR MPYFEKLNGL GVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDD KSMLELVFAPAKDWIG+PDEAIIEATMEELYRLFPNEL KDGSGA+LLKSAVVKTPLSVYEATAGRE+YRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADAA  GT+
Sbjct:    1 MMGVRGDAFVLLMLA--GKMALAFVPSSLTVFRGTAPLVVGRQS---KTSVPSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSQTFIDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHEPIVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMAKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMEQRISQVLLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLMLPDEWRPMPYFEKLNGLTGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDEKSMLELVFAPAKDWIGRPDEAIIEATMEELYRLFPNELNKDGSGAQLLKSAVVKTPLSVYEATAGRELYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAAAGTI 557          
BLAST of mRNA_P-lacustris_contig1219.1639.1 vs. uniprot
Match: A0A2H4YKI9_9PHAE (Amine oxidase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A2H4YKI9_9PHAE)

HSP 1 Score: 979 bits (2531), Expect = 0.000e+0
Identity = 491/561 (87.52%), Postives = 521/561 (92.87%), Query Frame = 1
Query:    4 MSARDGAFLALALALTGKTASAFLPPS-TGFAGWGLTNAGPQSTTRKNRALSMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFVDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPLVLEARDVLGGKVAAWQDKDGDWVETGVHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMKQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLALPDAWRSMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDNKSMLELVFAPAKDWIGKPDEAIIEATMEELYRLFPNELKKDGSGAKLLKSAVVKTPLSVYEATAGREMYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAIKGTV 1683
            MS R   F+ALALA  G  ASAF+P   T F G     A    T  +N   SMIFD+PAPG RKDYPRPPLEETS+NQR+SAAFSQAFVDMPRP+RPLKVAVIGAGLAGLSCAKYLSDAGH+P+VLEARDVLGGKVAAWQDKDGDW+ETG+HIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFP LLPAPLNGLVAILLNNEMLTFPEKIQFGIGL+PAILFGQKYVEECDSLTV++WMKKQGVPDRVNDEVFIAMAKALNFIDP+NLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRM QRIS+I+LNDDKTVKGLKMQDGS V ADAYVSTMPVD+LKL LPD W+ MPYF+KLNGL GVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDD+KSMLELVFAPAKDWIG+PDE II+ATMEELYRLFPNE+ +DGS AKLLKSAVVKTPLSVYEATAGRE+YRPVQTSP++NFFLAGCFTKQKYLASMEGATFSGKLAARALADAA+ GT+
Sbjct:    1 MSVRGNVFVALALA--GNLASAFMPSCVTVFRGADSLRA---RTHSRNGVSSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSQAFVDMPRPDRPLKVAVIGAGLAGLSCAKYLSDAGHEPVVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMNQRISKIMLNDDKTVKGLKMQDGSMVEADAYVSTMPVDILKLMLPDEWKPMPYFDKLNGLEGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKDWIGRPDEEIIQATMEELYRLFPNEIMRDGSKAKLLKSAVVKTPLSVYEATAGRELYRPVQTSPLANFFLAGCFTKQKYLASMEGATFSGKLAARALADAAMAGTI 556          
BLAST of mRNA_P-lacustris_contig1219.1639.1 vs. uniprot
Match: A0A2H4YKK3_9PHAE (Amine oxidase n=6 Tax=Sargassum TaxID=3015 RepID=A0A2H4YKK3_9PHAE)

HSP 1 Score: 956 bits (2472), Expect = 0.000e+0
Identity = 476/546 (87.18%), Postives = 506/546 (92.67%), Query Frame = 1
Query:   46 LTGKTASAFLPPSTGFAGWGLTNAGPQSTTRKNRALSMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFVDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPLVLEARDVLGGKVAAWQDKDGDWVETGVHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMKQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLALPDAWRSMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDNKSMLELVFAPAKDWIGKPDEAIIEATMEELYRLFPNELKKDGSGAKLLKSAVVKTPLSVYEATAGREMYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAIKGTV 1683
            L G   SAF+P +  F G G  +AG      ++ ALSMIFD+PAPG RKDYPRPPLE+TS+NQRE+AAFSQ F++MPRP RPLKVAVIGAGLAGLSCAKYLSDAGH P+VLEARDVLGGKVAAWQDKDGDW+ETG+HIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRF+FP LLPAPLNGLVAILLNNEMLTFPEKIQFGIGL+PAILFGQKYVEECDSLTV++WM KQGVPDRVNDEVFIAMAKALNFIDP+NLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHM+ARGGELRM QRIS ILLNDDKTV+GLKMQDGS V ADAYVSTMPVDVLKL LP+ WR +PYFEKL+GL GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDD+KSMLELVFAPAKDWIG+ DE II+ATM ELYRLFPNEL +DGSGAKLLK AVVKTPLSVYEATAGREMYRP QTSPI NFFLAGCFTKQKYLASMEGATFSGKLAARALADAAI GT+
Sbjct:   13 LAGNLVSAFVPIT--FVGTG--SAGSSRLRGRSGALSMIFDYPAPGVRKDYPRPPLEDTSQNQREAAAFSQTFINMPRPSRPLKVAVIGAGLAGLSCAKYLSDAGHNPVVLEARDVLGGKVAAWQDKDGDWIETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMTKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMIARGGELRMNQRISSILLNDDKTVRGLKMQDGSMVEADAYVSTMPVDVLKLMLPEEWRPIPYFEKLSGLTGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKDWIGRSDEDIIDATMGELYRLFPNELARDGSGAKLLKYAVVKTPLSVYEATAGREMYRPEQTSPIPNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAIAGTI 554          
BLAST of mRNA_P-lacustris_contig1219.1639.1 vs. uniprot
Match: A0A2H4YKJ3_9PHAE (Amine oxidase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A2H4YKJ3_9PHAE)

HSP 1 Score: 923 bits (2386), Expect = 0.000e+0
Identity = 464/559 (83.01%), Postives = 502/559 (89.80%), Query Frame = 1
Query:   10 ARDGAFLALALALTGKTASAFLPPSTGFA-GWGLTNAGPQSTTRKNRALSMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFVDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPLVLEARDVLGGKVAAWQDKDGDWVETGVHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMKQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLALPDAWRSMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDNKSMLELVFAPAKDWIGKPDEAIIEATMEELYRLFPNELKKDGSGAKLLKSAVVKTPLSVYEATAGREMYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAIKGTV 1683
            AR   +  +AL  TG   + F+  ST    G     AG +S   +N   SMIFD+PAPG RKDYPRPPLEETS+NQR+SAAFS++F+++PRPERPLKVAVIGAGLAGLSCAKYLSDAGH+PLVLEARDVLGGKV+AWQDKDGDWVETG+HIFFGAYPNVNQMF EL I DRLQWKSHSMIFAMPGQ+TA+GFQRFSRFEF  LLPAPLNGLVAILLN EMLT  EKIQFGIGL+PAILFGQKYVEECD LTV++WMKKQGVPDRVNDEVFIAMAKALNFIDP NLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMAD+MLA+GGELR  QR++ ILLN D+TVKGL+M+DGS V ADAYVSTMPVDVLKL LPD WR MPYFEKLNGL+GVPVINIHMWFD+KLTTVDHLLFSRSPLLSVYADMSLTCKGYRDD KSMLELVFAPAK+WIG+PDE II+ATM ELYRLFPNE+ KDGSGAKLLK AVVKTPLSVYEATAGRE YRPVQT+PI NFFLAGCFTKQKYLASMEGATFSGKLAA+ALA+AAI GTV
Sbjct:    2 ARACVYTLIALTSTGTLCNGFVSSSTTLRKGTAPPGAGARS---RNGVTSMIFDYPAPGVRKDYPRPPLEETSQNQRDSAAFSRSFLELPRPERPLKVAVIGAGLAGLSCAKYLSDAGHQPLVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNQMFKELDIEDRLQWKSHSMIFAMPGQKTAEGFQRFSRFEFTDLLPAPLNGLVAILLNTEMLTLTEKIQFGIGLIPAILFGQKYVEECDCLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPGNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLAKGGELRTNQRVATILLNGDQTVKGLQMRDGSLVEADAYVSTMPVDVLKLMLPDQWRPMPYFEKLNGLSGVPVINIHMWFDKKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDEKSMLELVFAPAKEWIGRPDEDIIDATMGELYRLFPNEISKDGSGAKLLKYAVVKTPLSVYEATAGREAYRPVQTTPIRNFFLAGCFTKQKYLASMEGATFSGKLAAKALAEAAIAGTV 557          
BLAST of mRNA_P-lacustris_contig1219.1639.1 vs. uniprot
Match: A0A2H4YKJ7_9PHAE (Amine oxidase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A2H4YKJ7_9PHAE)

HSP 1 Score: 922 bits (2383), Expect = 0.000e+0
Identity = 457/543 (84.16%), Postives = 498/543 (91.71%), Query Frame = 1
Query:   64 SAFLPPSTGFAGWGLTNAGPQSTTRKNRA---LSMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFVDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPLVLEARDVLGGKVAAWQDKDGDWVETGVHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMKQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLALPDAWRSMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDNKSMLELVFAPAKDWIGKPDEAIIEATMEELYRLFPNELKKDGSGAKLLKSAVVKTPLSVYEATAGREMYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAIKGTV 1683
            SAF+P +   AG  +      + TR  RA    SMIFD+P  G RKDYPRPPLEETS+NQR++A+FSQA  D+PR ERPLKVAVIGAGLAGLSCAKYLSDAGHKP+VLEARDVLGGKV+AWQDKDGDWVETG+HIFFGAYPNVNQMF EL I DRLQWKSHSMIFAMPGQQT DGFQRFSRF+FPALLPAPLNGLVAILLNN+ML+FPEK+QFGIGL+PAILFGQ+YVEECD LTV++WMKKQGVPDRVNDEVFIAMAKALNFIDP+NLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMAD+MLARGGELRMKQRIS+IL++DDKTVKGL+MQDGS V ADAYVSTMPVD LKL LP+ W+ +PYF+KL GL GVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDD+KSMLELVFAPAK+WIG+PD  IIEATMEELYRLFPNE+ +DGSGA+L+K AVVKTPLSVYEATAGRE+YRPVQTSPI NFFLAGCFTKQKYLASMEGATFSGKLAA+ALADAA+  TV
Sbjct:   20 SAFVPLNPR-AGIDVVRRSAVARTRARRADGVSSMIFDYPPQGVRKDYPRPPLEETSQNQRDAASFSQAIADLPRTERPLKVAVIGAGLAGLSCAKYLSDAGHKPIVLEARDVLGGKVSAWQDKDGDWVETGLHIFFGAYPNVNQMFKELDIEDRLQWKSHSMIFAMPGQQTEDGFQRFSRFDFPALLPAPLNGLVAILLNNDMLSFPEKLQFGIGLIPAILFGQRYVEECDELTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELRMKQRISKILVHDDKTVKGLQMQDGSIVEADAYVSTMPVDPLKLMLPEEWKQLPYFQKLEGLRGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKEWIGRPDSEIIEATMEELYRLFPNEMNRDGSGARLVKVAVVKTPLSVYEATAGRELYRPVQTSPIPNFFLAGCFTKQKYLASMEGATFSGKLAAKALADAALAETV 561          
BLAST of mRNA_P-lacustris_contig1219.1639.1 vs. uniprot
Match: A0A835Z8Q9_9STRA (15-cis-phytoene desaturase, chloroplastic/chromoplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q9_9STRA)

HSP 1 Score: 835 bits (2158), Expect = 1.110e-301
Identity = 405/506 (80.04%), Postives = 454/506 (89.72%), Query Frame = 1
Query:  166 DFPAPGERKDYPRPPLEETSENQRESAAFSQAFVDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPLVLEARDVLGGKVAAWQDKDGDWVETGVHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMKQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLALPDAWRSMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDNKSMLELVFAPAKDWIGKPDEAIIEATMEELYRLFPNELKKDGSGAKLLKSAVVKTPLSVYEATAGREMYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADAAIKGTV 1683
            D+PAPG R+D+PRPPLEETSENQR SA  S+    +PRPE+PLKVA+IGAGLAGLS AKYL+DAGH+P + E+RDVLGGKV+AWQD DGDWVETG+HIFFGAYPNVNQMF ELGI DRLQWKSHSMIFAMPGQQTA+GFQRFSRFEFP  LPAP+NG+ AIL+NNEMLT+PEKI+FGIGLLPAILFGQ YVEECD L+VS+WM+KQGVP+RVN+EVFIAMAKALNFIDP+NLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMAD++  RGG + +++R+S+I LNDD TVK LK+Q G TV AD YVS MPVD LKL LP+ WR +PYF+ L+GL GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADM+LTC GYRDD KSMLELVFAPAKDWIG+PDE II ATM+EL  LFPNE+  DGS AKLLKS VVKTPLSVYEAT GRE +RPVQTSPI+NFFLAGCFTKQKYLASMEGATFSGKL A+A+A+AA+ G V
Sbjct:   14 DYPAPGVRRDFPRPPLEETSENQRASAQLSEYIKSLPRPEKPLKVAIIGAGLAGLSTAKYLTDAGHEPTIYESRDVLGGKVSAWQDADGDWVETGLHIFFGAYPNVNQMFKELGIEDRLQWKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWRPLPYFKLLDGLKGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMALTCNGYRDDEKSMLELVFAPAKDWIGRPDEEIIAATMKELEILFPNEISADGSKAKLLKSHVVKTPLSVYEATPGREDFRPVQTSPINNFFLAGCFTKQKYLASMEGATFSGKLCAQAIAEAAVAGRV 519          
BLAST of mRNA_P-lacustris_contig1219.1639.1 vs. uniprot
Match: Q5UAX3_HAELA (Phytoene dehydrogenase n=4 Tax=Haematococcus lacustris TaxID=44745 RepID=Q5UAX3_HAELA)

HSP 1 Score: 701 bits (1808), Expect = 7.060e-248
Identity = 341/491 (69.45%), Postives = 404/491 (82.28%), Query Frame = 1
Query:  190 KDYPRPPLEETSENQRESAAFSQAFVDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPLVLEARDVLGGKVAAWQDKDGDWVETGVHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMKQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLALPDAWRSMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDNKSMLELVFAPAKDWIGKPDEAIIEATMEELYRLFPNELKKDGSGAKLLKSAVVKTPLSVYEATAGREMYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALAD 1662
            KDYP P  + +S+  +E+ + S    + PRP +PL+V + GAGLAGLS AKYL+DAGH P+VLE RDVLGGKVAAW+D+DGDW ETG+HIFFGAYPN+  +F ELGI+DRLQWK HSMIFAMP     D    FSRF+FP L PAP NG++AIL NN+ML++PEKI+F IGLLPAI+FGQ+Y EE D LTV++WM+KQGVPDRVN+EVFIAMAKALNFI+P++LSMTVVLTALNRFLQE HGSKMAFLDG PP RLCQPM D+  ARGG+L    R+ +I+LNDDK+VK L + +G TV  D Y+S MPVD++K+ +PD W SMPYF++LNGL GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADMS TCK Y D+ KSMLELVFAPAK+WIG+PDE II ATM EL RLFP E++ D S AK+LK  VVKTPLSVY++TAGRE +RP Q SPISNF+LAG +TKQKYLASMEGA FSGKL   A+ +
Sbjct:   40 KDYPTPDFQ-SSDTYQEALSLSTKLRNAPRPAKPLRVVIAGAGLAGLSAAKYLADAGHHPVVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFKELGIQDRLQWKEHSMIFAMP-----DAPGEFSRFDFPEL-PAPWNGIIAILRNNQMLSWPEKIRFAIGLLPAIIFGQRYCEEQDELTVTEWMRKQGVPDRVNEEVFIAMAKALNFINPDDLSMTVVLTALNRFLQEQHGSKMAFLDGAPPERLCQPMVDYFKARGGDLMFNSRVKQIVLNDDKSVKHLALTNGQTVEGDLYISAMPVDIMKILMPDPWASMPYFKQLNGLEGVPVINIHIWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKEYADEKKSMLELVFAPAKEWIGRPDEEIIAATMTELERLFPTEVRADQSMAKILKYKVVKTPLSVYKSTAGREKFRPTQRSPISNFYLAGDYTKQKYLASMEGAVFSGKLVTEAIVE 523          
BLAST of mRNA_P-lacustris_contig1219.1639.1 vs. uniprot
Match: V5NRJ5_ULVPE (Phytoene dehydrogenase n=1 Tax=Ulva pertusa TaxID=3120 RepID=V5NRJ5_ULVPE)

HSP 1 Score: 696 bits (1795), Expect = 1.760e-246
Identity = 354/516 (68.60%), Postives = 410/516 (79.46%), Query Frame = 1
Query:  121 PQSTT-RKNRALSMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFVDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPLVLEARDVLGGKVAAWQDKDGDWVETGVHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMKQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLALPDAWRSMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDNKSMLELVFAPAKDWIGKPDEAIIEATMEELYRLFPNELKKDGSGAKLLKSAVVKTPLSVYEATAGREMYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALADA 1665
            PQS T RK + LS++         +DYP+P  E     Q E+   S    + PRP+ P KVAVIGAGLAGLS AKYL+DAGH P+VLE RDVLGGKVAAW+D+DGDW ETG+HIFFGAY N+  +F+EL I DRLQWK HSMIFAMP +        FSRF+FP L PAP+NG+ AIL N+EMLT+PEKIQF +GLLPAI+FGQKYVE+ D LTV++WM+KQ VPDRVNDEVFIAMAKALNFIDP++LSMTVVLTALNRFLQE HGSKMAFLDG PP RLCQPM D++   GG++++ QR+ EI+LN D TVK L+M DGS V AD YVS+ PVD++KL LPDAW  M +F++++GL GVPVINIH+WFD KLTTVDHLLFSRSPLLSVYADMS TC+ Y D NKSMLELVFAPAKDWIGK DE II ATM EL RLFP E+K D S AK+LK  V+KT  SVYEATAGRE YRP Q +PI NF+L GC+TKQKYLASMEGA FSGKLAAR + DA
Sbjct:   16 PQSRTIRKQKRLSVLA--------RDYPKPNFEVGGTFQ-EAKQLSDYIKNAPRPQSPKKVAVIGAGLAGLSAAKYLTDAGHTPVVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYANMMNIFSELNIEDRLQWKEHSMIFAMPDEPG-----EFSRFDFPDL-PAPINGVTAILRNDEMLTWPEKIQFALGLLPAIIFGQKYVEDQDKLTVTEWMRKQNVPDRVNDEVFIAMAKALNFIDPDSLSMTVVLTALNRFLQERHGSKMAFLDGAPPERLCQPMVDYVKDHGGDVQVNQRVKEIVLNTDSTVKHLQMTDGSIVEADLYVSSAPVDIMKLLLPDAWSKMAFFKQMDGLEGVPVINIHIWFDTKLTTVDHLLFSRSPLLSVYADMSTTCREYEDANKSMLELVFAPAKDWIGKSDEQIIAATMLELERLFPTEVKADESLAKILKYKVIKTARSVYEATAGREDYRPTQKTPIDNFYLCGCYTKQKYLASMEGAIFSGKLAAREIVDA 516          
BLAST of mRNA_P-lacustris_contig1219.1639.1 vs. uniprot
Match: A0A383V3D0_TETOB (Phytoene dehydrogenase n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383V3D0_TETOB)

HSP 1 Score: 691 bits (1784), Expect = 1.890e-244
Identity = 349/510 (68.43%), Postives = 404/510 (79.22%), Query Frame = 1
Query:  154 SMIFDFPAPGERK-------DYPRPPLEETSENQRESAAFSQAFVDMPRPERPLKVAVIGAGLAGLSCAKYLSDAGHKPLVLEARDVLGGKVAAWQDKDGDWVETGVHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMKQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLALPDAWRSMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDNKSMLELVFAPAKDWIGKPDEAIIEATMEELYRLFPNELKKDGSGAKLLKSAVVKTPLSVYEATAGREMYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARALAD 1662
            S +   P  G RK       DYP+P  E T+   +E+ A S    + PRPE+PLKV +IGAGLAGLS AKYLSDAGH P+VLE RDVLGGKVAAW+D+DGDW ETG+HIFFGAYPN+  +F EL I +RLQWK HSMIFAMP     D    FSRF+FP + PAP NG+ AIL NN+MLT+PEKIQF +GLLPAI+ GQKYVE+ D LTV++WM++QGVP+RVNDEVFIAMAKALNFIDP++LSMTVVLTALNRFLQE HGSKMAFLDG PP RLCQP+ D+  A+GG++RM  R+ EI LN D +VK L M +G T+  D YVS MPVD++KL  P+ W +MPYF +LNGL GVPVINIH+WFD+K  TVDHLLFSRSPLLSVYADMS+TCK Y D NKSMLELVFAPA+ WIG+PDE II ATM EL RLFP E+  D S AK+LK  VVKTPLSVY+ATAGRE YRP Q SPISNF+LAG +TKQKYLASMEGA FSGKLAA AL +
Sbjct:   31 SSVAARPVRGSRKQLSVVARDYPKPAFE-TAGTFQEAQALSDKLRNAPRPEKPLKVVIIGAGLAGLSTAKYLSDAGHIPIVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNLMNVFKELNIEERLQWKEHSMIFAMP-----DSPGEFSRFDFPDI-PAPFNGIFAILANNQMLTWPEKIQFALGLLPAIVGGQKYVEDQDKLTVTEWMRQQGVPNRVNDEVFIAMAKALNFIDPDDLSMTVVLTALNRFLQEKHGSKMAFLDGAPPERLCQPLVDYFTAKGGQIRMNARLKEIKLNADGSVKELAMVNGETIEGDLYVSAMPVDIMKLLTPEPWAAMPYFSQLNGLEGVPVINIHIWFDQKFKTVDHLLFSRSPLLSVYADMSVTCKEYADPNKSMLELVFAPAEGWIGRPDEEIIAATMTELERLFPTEIAADQSKAKILKYKVVKTPLSVYKATAGREEYRPTQRSPISNFYLAGDYTKQKYLASMEGAIFSGKLAAEALVE 533          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1219.1639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPN3_ECTSI0.000e+092.70Amine oxidase n=8 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A2H4YKJ4_SACJA0.000e+088.97Amine oxidase n=2 Tax=Laminariales TaxID=2886 RepI... [more]
A0A2H4YKI9_9PHAE0.000e+087.52Amine oxidase n=1 Tax=Desmarestia viridis TaxID=62... [more]
A0A2H4YKK3_9PHAE0.000e+087.18Amine oxidase n=6 Tax=Sargassum TaxID=3015 RepID=A... [more]
A0A2H4YKJ3_9PHAE0.000e+083.01Amine oxidase n=1 Tax=Dictyopteris undulata TaxID=... [more]
A0A2H4YKJ7_9PHAE0.000e+084.16Amine oxidase n=1 Tax=Ishige okamurae TaxID=233772... [more]
A0A835Z8Q9_9STRA1.110e-30180.0415-cis-phytoene desaturase, chloroplastic/chromopl... [more]
Q5UAX3_HAELA7.060e-24869.45Phytoene dehydrogenase n=4 Tax=Haematococcus lacus... [more]
V5NRJ5_ULVPE1.760e-24668.60Phytoene dehydrogenase n=1 Tax=Ulva pertusa TaxID=... [more]
A0A383V3D0_TETOB1.890e-24468.43Phytoene dehydrogenase n=2 Tax=Scenedesmaceae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1219contigP-lacustris_contig1219:12711..17220 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1036.6
Seed ortholog evalue4.3e-300
Seed eggNOG ortholog2880.D8LPN3
Preferred namePDS1
KEGG rclassRC01214,RC01958,RC03092,RC03093
KEGG koko:K02293
KEGG ReactionR04786,R04787,R07510,R09652,R09653,R09654
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
KEGG ModuleM00097
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009526,GO:0009534,GO:0009536,GO:0009579,GO:0009941,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016166,GO:0016491,GO:0016627,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0055114,GO:0071704,GO:1901576
EggNOG free text desc.oxidoreductase activity
EggNOG OGsCOG1231@1,KOG0029@2759
Ec32 ortholog descriptionPhytoene desaturase, chloroplast precursor
Ec32 orthologEc-18_001850.1
EC1.3.5.5
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons8
Model size1683
Cds size1680
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815536.9946637-CDS-P-lacustris_contig1219:12710..129531622815536.9946637-CDS-P-lacustris_contig1219:12710..12953Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 12711..12953 -
1693493596.7582767-CDS-P-lacustris_contig1219:12710..129531693493596.7582767-CDS-P-lacustris_contig1219:12710..12953Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 12711..12953 -
1622815537.0153446-CDS-P-lacustris_contig1219:13754..139291622815537.0153446-CDS-P-lacustris_contig1219:13754..13929Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 13755..13929 -
1693493596.7694297-CDS-P-lacustris_contig1219:13754..139291693493596.7694297-CDS-P-lacustris_contig1219:13754..13929Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 13755..13929 -
1622815537.0306983-CDS-P-lacustris_contig1219:14610..148251622815537.0306983-CDS-P-lacustris_contig1219:14610..14825Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 14611..14825 -
1693493596.7808962-CDS-P-lacustris_contig1219:14610..148251693493596.7808962-CDS-P-lacustris_contig1219:14610..14825Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 14611..14825 -
1622815537.0443769-CDS-P-lacustris_contig1219:15114..152611622815537.0443769-CDS-P-lacustris_contig1219:15114..15261Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 15115..15261 -
1693493596.794234-CDS-P-lacustris_contig1219:15114..152611693493596.794234-CDS-P-lacustris_contig1219:15114..15261Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 15115..15261 -
1622815537.056855-CDS-P-lacustris_contig1219:15587..158161622815537.056855-CDS-P-lacustris_contig1219:15587..15816Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 15588..15816 -
1693493596.8042562-CDS-P-lacustris_contig1219:15587..158161693493596.8042562-CDS-P-lacustris_contig1219:15587..15816Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 15588..15816 -
1622815537.0699728-CDS-P-lacustris_contig1219:16024..163171622815537.0699728-CDS-P-lacustris_contig1219:16024..16317Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 16025..16317 -
1693493596.8112476-CDS-P-lacustris_contig1219:16024..163171693493596.8112476-CDS-P-lacustris_contig1219:16024..16317Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 16025..16317 -
1622815537.081429-CDS-P-lacustris_contig1219:16658..169491622815537.081429-CDS-P-lacustris_contig1219:16658..16949Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 16659..16949 -
1693493596.8184824-CDS-P-lacustris_contig1219:16658..169491693493596.8184824-CDS-P-lacustris_contig1219:16658..16949Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 16659..16949 -
1622815537.0946286-CDS-P-lacustris_contig1219:17130..172171622815537.0946286-CDS-P-lacustris_contig1219:17130..17217Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 17131..17217 -
1693493596.8261268-CDS-P-lacustris_contig1219:17130..172171693493596.8261268-CDS-P-lacustris_contig1219:17130..17217Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1219 17131..17217 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815537.1057718-UTR-P-lacustris_contig1219:17217..172201622815537.1057718-UTR-P-lacustris_contig1219:17217..17220Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1219 17218..17220 -
1693493596.8348978-UTR-P-lacustris_contig1219:17217..172201693493596.8348978-UTR-P-lacustris_contig1219:17217..17220Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1219 17218..17220 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1219.1639.1prot_P-lacustris_contig1219.1639.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1219 12711..17217 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1219.1639.1

>prot_P-lacustris_contig1219.1639.1 ID=prot_P-lacustris_contig1219.1639.1|Name=mRNA_P-lacustris_contig1219.1639.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=560bp
MSARDGAFLALALALTGKTASAFLPPSTGFAGWGLTNAGPQSTTRKNRAL
SMIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFVDMPRPERPLKVA
VIGAGLAGLSCAKYLSDAGHKPLVLEARDVLGGKVAAWQDKDGDWVETGV
HIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFE
FPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDS
LTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQ
ETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMKQRISEILLNDDKTV
KGLKMQDGSTVVADAYVSTMPVDVLKLALPDAWRSMPYFEKLNGLNGVPV
INIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDNKSMLELVF
APAKDWIGKPDEAIIEATMEELYRLFPNELKKDGSGAKLLKSAVVKTPLS
VYEATAGREMYRPVQTSPISNFFLAGCFTKQKYLASMEGATFSGKLAARA
LADAAIKGTV
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mRNA from alignment at P-lacustris_contig1219:12711..17220-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1219.1639.1 ID=mRNA_P-lacustris_contig1219.1639.1|Name=mRNA_P-lacustris_contig1219.1639.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4510bp|location=Sequence derived from alignment at P-lacustris_contig1219:12711..17220- (Pleurocladia lacustris SAG_25_93)
ATCATGAGTGCAAGAGATGGTGCCTTCTTGGCATTGGCATTGGCATTGAC AGGGAAGACGGCATCAGCGTTCTTGCCACCCTCTACTGGAGTGCCGGTGA GTCGAGCAAGCGATGTGAAGTAAAGTCAGATTGCATGAACGTGTGTCATG TGTGTGTCATGTTCGTCAACGGACGGATTTTGCTACTGCCGTGCCGGAAC TCATGTGATCACGCGTGCGCGCATCAATGCTGTTGCGTGAATGCCATCAT ATATGCCGCGGTTGTCTCCAGTTCGCTGGATGGGGATTGACGAACGCCGG ACCGCAGAGCACCACCAGGAAAAATCGTGCCTTGTCCATGATCTTTGACT TCCCCGCGCCCGGAGAAAGAAAAGACTATCCCCGACCGCCCTTGGAGGAA ACCTCCGAGAACCAGCGGGAGTCTGCAGCCTTCTCGCAAGCGTTTGTCGA TATGCCTCGTCCGGAGCGACCGTTAAAGGTTGCTGTTATTGGAGCGGGGC TAGCAGGGCTATCATGCGCAAAGTACTTGTCTGATGCAGGGCACAAACCG CTTGTCCTCGAGGTGAGTGGCACACATGTACGCGCACGCGCAAGTCACGC ACCCCACGTTATCCAAGAAACTTCATCCTCTTTAGAAACGAAGGGTGTGC CTGAGTCTTTCTGATCAGACGTTGTAACGGGGATGTTGAATATCGCACAA CAGCAGTAGCGCTTCCACTTGAAAACCACAGAGGATCGGCGGCGGACCCG CCGTGTGCGAAAGCCCTCTTTCGTGAATCCCACGTAATTGATCCGTAGTA GAGAAGGTCGACCCACAAGACGAATGTTGTGGAGACTTGTTATTTGTGAC GTCCAGCCTCACCTTATCCTCACCTTGTCTTCGCCGTACCAACGGTTATC CAGGCAAGGGATGTGTTGGGAGGGAAAGTGGCTGCATGGCAAGACAAAGA CGGCGACTGGGTCGAGACTGGCGTGCACATCTTTTTCGGCGCCTACCCAA ACGTGAACCAGATGTTTACAGAGCTAGGCATTCGGGACCGCTTGCAGTGG AAGTCGCACAGCATGATATTTGCGATGCCGGGACAGCAGACTGCTGACGG ATTCCAGCGATTTTCCCGCTTCGAATTCCCCGCCTTGCTACCTGCTCCTC TCAATGGCCTCGTGGCTATACTCCTCAACAACGAGATGCTCACGTTGTAA GTGCTGGGGGCTGACCTGTCCGAGATCTAGATTGAGAATTAACTTTGCTG TACCAAGTGGTGCACTGTATGCGTCCACGTCATGTGATGTGCATGCGTGT CTCATCACGAGCTCAGATCATTCGTTTCCCCTCCTTGACAGCCCATTTCG GGCCCTTTCCGGACGCTGTTCCCATTTGTCGTCATTTGCTCGGTCGGCCG ACAGTCCGGAGAAGATCCAGTTTGGTATCGGGCTTCTGCCAGCCATTCTA TTCGGGCAAAAGTACGTCGAGGAGTGTGATTCGCTCACTGTGTCGCAGTG GATGAAAAAGCAAGGAGTCCCGGACCGTGTGAACGACGAGGTGTTCATTG CCATGGCCAAGGCTCTCAACTTCATTGACCCTGAGAACCTGTCCATGACC GTTGTGTTGACGGCACTCAACCGTTTCCTCCAGGTGACGAAAAACCGCTG CTTCATACAAAGGACACAGTCGTCGCCGGCCCGCGTAGTTCGCACTGGGG TTCGCAACGATTATTGCCTTCGAGTGTTTTTTTTTGGATGCTTGTCATGC TTGTGTGCAACACAAAACAGACATTTGATTCCTCCCACGACGGGGCGCGT GCAATAAACATAAAACGTGCTTAGATGTCCATGTACACTAGTGGCCATGG CCAAAAGCCATGGCCAAAAGCCTTAGTACTCAGCCAAATGATGGCCCATT CCGGGCGGTCTCAAGAACTATGATCTGTCGAAATGCAAGCGACTGGCTAT TGTTATCAGGAAACCCACGGGTCCAAGATGGCATTTTTGGATGGGCCGCC ACCGACTCGGTTGTGCCAACCTATGGCCGACCATATGCTTGCCCGCGGCG GAGAGTTGAGGATGAAACAGCGAATCTCCGAGATTTTGCTCAACGACGAC AAAACGGTGCGTTCTCACGTCATTCCTTGCTTGAAATCACAACGCGGTGG TATCGCTACGTACAATTTTGCATAGGCGTTGAACGCGCGCCAGGGTGATC TGCACAACCCTGCTTGGTGTAGCGTCGAATGCGTGCATGGTTGAGTTTTC TGTAGAGCTCCACCGTTTGTATGTTATTTGGCGCTCTGTCGGCAAGGTCC TACGGAACTGGGTGTATTTTTTCCAGAACTAATAGCAACCTTGATTCCGC CGTCAAGACAACCCACCCATTTTTGCCGTTTTCACGCACTCCTAGGTCAA AGGCTTGAAAATGCAAGACGGGTCAACCGTGGTGGCTGATGCGTACGTCT CGACCATGCCGGTTGACGTTCTCAAACTTGCGCTTCCCGACGCATGGAGG TCCATGCCCTACTTCGAGAAATTGAACGGCTTGAACGGGGTACCTGTGAT CAACATCCATATGTGGTTTGACAGGAAGCTGACGACGGTGGATCATCTCC TTTTCTCACGGTGAGGCTTTTGGAGAAGGCCCAGTCCATCTCGCACAGGG CTGAGAAAACATTGGCGAGACCATTGCTCCCCACCACGTGAACCCAAAAC CGGGGTACACGTGCAGCAAGTGTCAATTTTCAGCGTGGCGTGACTGAGAA TAAGATTTTTTTTTTATTTCAACCGCACGCGAGCTGCGAAGCTACATCAC CTACTTCTGCTGCGTTCTAAACGAACGCGATAAGTCTATGGTGTGTTTGC TTTTTGTGCACATCGTTGGGTATCAGCCACTGCTGGGTTGTCCGAAGGGT TTCATCATACTGGAAGTTACCGTTGCGCCCCGGACGTGGTAGTTGGTCAG ATATTGTAGTTCGCAATGGCAATGGTCTCTTCATCGTTTGCAGACAGCTG TGAGCACCACGTGCAGCGCTTTCATATATGCTAGACTCTAGTGTCGTGCG CCGGCAAGCCCTGAGTGTGCAGAGCACCTTCACGGATGCTGAGGTCCCGG CGTCTCCTGCGATAATGTGTGATTGGATGCAGGACATGTACTGTAGACCA GAACTTTCGAGTAGTCACGCGTTCCCATGTATGAAGAATCGCAACGCCAT GGTGAAAGCGGCGCCCACGCAGGGTTGCGACAGGTCATTGAGCAACCAAT CCGAATCGTGCGCGCTGTCGTGGGTGGTTGCCATCTTGCAGGTCTCCACT GCTCTCGGTATACGCAGACATGTCGCTCACGTGCAAAGGCTACCGTGACG ACAACAAGTCGATGCTGGAGCTCGTATTTGCCCCCGCAAAAGATTGGATT GGCAAGCCGGATGAGGCTATTATCGAGGCAACCATGGAGGAGCTGTACAG GCTTTTCCCTAACGAGGTGTGTCGTGCTTTCGTCCACGCGGCCCTGACGC ACTAGCGCGGCCAGACATGTCGCCTTCGCTCCAGACGCGCGTTCAGGAGC ATTCTAACCAGTCGATACATAGGGTTTGAGAGAAAGCCCCCTGCAAACAA TACGTTTCGCGTATCCGGAATCTCGGGAAGGGGTCTGCAATCTATTCCGC TATCATCGGTGGTATTGTACCGCGCGATGCGATGCTTGAAAGTATAAACT CTCGACTTTCAGCGCTTGTGTGGCGTGCCATTTCGTATTTCGCAGGGCAG AAAACGCGTTTGTGCTTGTTGTGGTGACTTGACGGTTGGGCTCGAGTCTG TAGGTGACTAGTCTAGTTGGTTGGTTCGGCTTCTACAACGGTTTGTCGTG GGACCAGACCCGGCACTTTCACTTCCCGGGAGGCCGCTCCCATCGCCAGC GCTACTATCCATTTGATGTTATTTTCGCCCCATTTTATTTGTTTTTTCGC GCCATCCTAAACTCAATTCCTGGGTGTTTCCAAGGGTCTTGGGACCCTGT CCCCACCCATACTCCATCCAAGAGTATCACCCGGGGTCTTGAGAGAAAAT ATTTTTTACTTTTTGCGTCGGAAACAAAAAACATTTTTTTGTCATGCCGG GATTCGAACCCGCGACTAAACTTTTGTAGAAGCCGAAAACAACCCACTAC ACTGGTCAGCGCTGACCAGTCTAAATGGGTTATTTTTCGGCTTCTACAAG TCCGATGTTTTACTACACATTCTTGTGCGATGCTGACCTGCTGTATTATC TTTTGACGGCAATGCAGCTCAAGAAGGATGGTTCTGGGGCCAAGCTGCTC AAATCAGCCGTAGTCAAGACCCCTCTTTCGGTGTACGAGGCGACAGCCGG ACGGGAGATGTATCGCCCTGTGCAGACATCGCCCATTTCCAACTTTTTCC TGGCTGGGTGCTTCACCAAGCAAAAGTACTTGGCGAGTATGGAGGGCGCT ACTTTCTCTGGAAAGCTGGCGGCAAGGGCACTGGCGGATGCTGCCATCAA GGGCACGGTG
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Coding sequence (CDS) from alignment at P-lacustris_contig1219:12711..17220-

>mRNA_P-lacustris_contig1219.1639.1 ID=mRNA_P-lacustris_contig1219.1639.1|Name=mRNA_P-lacustris_contig1219.1639.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3360bp|location=Sequence derived from alignment at P-lacustris_contig1219:12711..17220- (Pleurocladia lacustris SAG_25_93)
ATGAGTGCAAGAGATGGTGCCTTCTTGGCATTGGCATTGGCATTGACAGG
GAAGACGGCATCAGCGTTCTTGCCACCCTCTACTGGAATGAGTGCAAGAG
ATGGTGCCTTCTTGGCATTGGCATTGGCATTGACAGGGAAGACGGCATCA
GCGTTCTTGCCACCCTCTACTGGATTCGCTGGATGGGGATTGACGAACGC
CGGACCGCAGAGCACCACCAGGAAAAATCGTGCCTTGTCCATGATCTTTG
ACTTCCCCGCGCCCGGAGAAAGAAAAGACTATCCCCGACCGCCCTTGGAG
GAAACCTCCGAGAACCAGCGGGAGTCTGCAGCCTTCTCGCAAGCGTTTGT
CGATATGCCTCGTCCGGAGCGACCGTTAAAGGTTGCTGTTATTGGAGCGG
GGCTAGCAGGGCTATCATGCGCAAAGTACTTGTCTGATGCAGGGCACAAA
CCGCTTGTCCTCGAGTTCGCTGGATGGGGATTGACGAACGCCGGACCGCA
GAGCACCACCAGGAAAAATCGTGCCTTGTCCATGATCTTTGACTTCCCCG
CGCCCGGAGAAAGAAAAGACTATCCCCGACCGCCCTTGGAGGAAACCTCC
GAGAACCAGCGGGAGTCTGCAGCCTTCTCGCAAGCGTTTGTCGATATGCC
TCGTCCGGAGCGACCGTTAAAGGTTGCTGTTATTGGAGCGGGGCTAGCAG
GGCTATCATGCGCAAAGTACTTGTCTGATGCAGGGCACAAACCGCTTGTC
CTCGAGGCAAGGGATGTGTTGGGAGGGAAAGTGGCTGCATGGCAAGACAA
AGACGGCGACTGGGTCGAGACTGGCGTGCACATCTTTTTCGGCGCCTACC
CAAACGTGAACCAGATGTTTACAGAGCTAGGCATTCGGGACCGCTTGCAG
TGGAAGTCGCACAGCATGATATTTGCGATGCCGGGACAGCAGACTGCTGA
CGGATTCCAGCGATTTTCCCGCTTCGAATTCCCCGCCTTGCTACCTGCTC
CTCTCAATGGCCTCGTGGCTATACTCCTCAACAACGAGATGCTCACGTTG
CAAGGGATGTGTTGGGAGGGAAAGTGGCTGCATGGCAAGACAAAGACGGC
GACTGGGTCGAGACTGGCGTGCACATCTTTTTCGGCGCCTACCCAAACGT
GAACCAGATGTTTACAGAGCTAGGCATTCGGGACCGCTTGCAGTGGAAGT
CGCACAGCATGATATTTGCGATGCCGGGACAGCAGACTGCTGACGGATTC
CAGCGATTTTCCCGCTTCGAATTCCCCGCCTTGCTACCTGCTCCTCTCAA
TGGCCTCGTGGCTATACTCCTCAACAACGAGATGCTCACGTTTCCGGAGA
AGATCCAGTTTGGTATCGGGCTTCTGCCAGCCATTCTATTCGGGCAAAAG
TACGTCGAGGAGTGTGATTCGCTCACTGTGTCGCAGTGGATGAAAAAGCA
AGGAGTCCCGGACCGTGTGAACGACGAGGTGTTCATTGCCATGGCCAAGG
CTCTCAACTTCATTGACCCTGAGAACCTGTCCATGACCGTTGTGTTGACG
GCACTCAACCGTTTCCTCCAGTCCGGAGAAGATCCAGTTTGGTATCGGGC
TTCTGCCAGCCATTCTATTCGGGCAAAAGTACGTCGAGGAGTGTGATTCG
CTCACTGTGTCGCAGTGGATGAAAAAGCAAGGAGTCCCGGACCGTGTGAA
CGACGAGGTGTTCATTGCCATGGCCAAGGCTCTCAACTTCATTGACCCTG
AGAACCTGTCCATGACCGTTGTGTTGACGGCACTCAACCGTTTCCTCCAG
GAAACCCACGGGTCCAAGATGGCATTTTTGGATGGGCCGCCACCGACTCG
GTTGTGCCAACCTATGGCCGACCATATGCTTGCCCGCGGCGGAGAGTTGA
GGATGAAACAGCGAATCTCCGAGATTTTGCTCAACGACGACAAAACGGAA
ACCCACGGGTCCAAGATGGCATTTTTGGATGGGCCGCCACCGACTCGGTT
GTGCCAACCTATGGCCGACCATATGCTTGCCCGCGGCGGAGAGTTGAGGA
TGAAACAGCGAATCTCCGAGATTTTGCTCAACGACGACAAAACGGTCAAA
GGCTTGAAAATGCAAGACGGGTCAACCGTGGTGGCTGATGCGTACGTCTC
GACCATGCCGGTTGACGTTCTCAAACTTGCGCTTCCCGACGCATGGAGGT
CCATGCCCTACTTCGAGAAATTGAACGGCTTGAACGGGGTACCTGTGATC
AACATCCATATGTGGTTTGACAGGAAGCTGACGACGGTGGATCATCTCCT
TTTCTCACGGTCAAAGGCTTGAAAATGCAAGACGGGTCAACCGTGGTGGC
TGATGCGTACGTCTCGACCATGCCGGTTGACGTTCTCAAACTTGCGCTTC
CCGACGCATGGAGGTCCATGCCCTACTTCGAGAAATTGAACGGCTTGAAC
GGGGTACCTGTGATCAACATCCATATGTGGTTTGACAGGAAGCTGACGAC
GGTGGATCATCTCCTTTTCTCACGGTCTCCACTGCTCTCGGTATACGCAG
ACATGTCGCTCACGTGCAAAGGCTACCGTGACGACAACAAGTCGATGCTG
GAGCTCGTATTTGCCCCCGCAAAAGATTGGATTGGCAAGCCGGATGAGGC
TATTATCGAGGCAACCATGGAGGAGCTGTACAGGCTTTTCCCTAACGAGG
TCTCCACTGCTCTCGGTATACGCAGACATGTCGCTCACGTGCAAAGGCTA
CCGTGACGACAACAAGTCGATGCTGGAGCTCGTATTTGCCCCCGCAAAAG
ATTGGATTGGCAAGCCGGATGAGGCTATTATCGAGGCAACCATGGAGGAG
CTGTACAGGCTTTTCCCTAACGAGCTCAAGAAGGATGGTTCTGGGGCCAA
GCTGCTCAAATCAGCCGTAGTCAAGACCCCTCTTTCGGTGTACGAGGCGA
CAGCCGGACGGGAGATGTATCGCCCTGTGCAGACATCGCCCATTTCCAAC
TTTTTCCTGGCTGGGTGCTTCACCAAGCAAAAGTACTTGGCGAGTATGGA
GGGCGCTACTTTCTCTGGAAAGCTGGCGGCAAGGGCACTGGCGGATGCTG
CCATCAAGGGCACGGTGCTCAAGAAGGATGGTTCTGGGGCCAAGCTGCTC
AAATCAGCCGTAGTCAAGACCCCTCTTTCGGTGTACGAGGCGACAGCCGG
ACGGGAGATGTATCGCCCTGTGCAGACATCGCCCATTTCCAACTTTTTCC
TGGCTGGGTGCTTCACCAAGCAAAAGTACTTGGCGAGTATGGAGGGCGCT
ACTTTCTCTGGAAAGCTGGCGGCAAGGGCACTGGCGGATGCTGCCATCAA
GGGCACGGTG
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