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Homology
BLAST of mRNA_P-lacustris_contig12.1500.1 vs. uniprot
Match: D7FJT5_ECTSI (Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJT5_ECTSI) HSP 1 Score: 661 bits (1705), Expect = 5.270e-221 Identity = 584/760 (76.84%), Postives = 609/760 (80.13%), Query Frame = 2
Query: 356 GCSPPPPRLPPNLPALQGMGNHPGGGGG--------PDNR-MGRGGMNGPNGNMGXXXXXXGPASAHSAGGRXXXXXXXXXXXPSINVYVGKLKAEADNTLVQELLMCCGRVEKWNRAVDPSTDLPKAFGFCTYYNAQAAAVAVQLLNDLELAGQAILVKVGKKEQPSLEAFLEPKDEKYSKKHKVLLDAVKAKIDSVLVKYGERSAPDKGASKDGDANSAGGKSPVSVGASSPPRSSDGGXXSGASKAGRGDGGSG-----YQQQGAVG------RKPKSWVRFDGAAMLLSSAGWSDDEDEEKEELITSEIEKFRQKQAERDKKLEDERRQELQRKIXXXXXXXXXXXXXXXXXXXXXXXREAREMVAMALMKSRDDKDAAEDLKKSGSDGNNATKASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRERSPDRDXXXXXXXXXXXGDRDSRRDDHRDSDRGGSRSSGGXXXXXXXXXXXXXXXXXXXXKGIEAKRAARAKLAEEERRKRGLAVLSALENAGNDRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPTVSPGSLGAAATR-------VEDGTAEDSKDVSESKVAAVVEKKGKARDKELVGSIPKDREELFAYEINWQMVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFIITKLGQRTPPQAILEELKLVLEEDAAVFMTKMWRMLVFCTLRAVERAQ 2554
G PPPPRLPPNLPALQGMG HPGG PD MGRGG NGPNG XXXXXXXXX PSINVYVGKLK E DN+LVQELL CCGRVEKWNRAVDPSTDLPKAFGFCTY+NAQAAA++VQLLNDLELAGQ ILVKVGKKEQPSLEAFL PKDE+Y+KKH+VLLD VKAKIDSVLV+YGERSAP KG+SK G+ANS GGKSPVSVGASSP RS G + G+GDGG G YQ + K WVR+DGAAMLLSSAGWS+DEDEEKEELITSEIEKFRQKQAERDKKLEDERRQELQRKI XXXXXXXXXXXXXXXXXXXXX REAREMVAMA MKSRDDKD A D KK G + + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRERS DRD XXXXXXXXX DSRRDDHRDSDRGG RSSGG XXXXXXXXXXXXXX +EAKRAARAKLAEEE RKR LAVLSALENAGND DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G + K+ SESKVAAVVEKKGKARDKELVGSIPKDREELFAYEINWQMVE HNIIQSKMRPWIVKKIIEYLGEEEKTLTEF++TKLGQR PQ IL+ELKLVLEEDAAVFMTKMWRMLVFCTLRA+ERAQ
Sbjct: 59 GARPPPPRLPPNLPALQGMGKHPGGXXXXXXXXXXXPDKMGMGRGGKNGPNGXX--------XXXXXXXXXXXXXXXXXXXGGPSINVYVGKLKPETDNSLVQELLTCCGRVEKWNRAVDPSTDLPKAFGFCTYHNAQAAAISVQLLNDLELAGQPILVKVGKKEQPSLEAFLSPKDEEYAKKHQVLLDTVKAKIDSVLVRYGERSAPGKGSSKGGNANSDGGKSPVSVGASSPSRSGRGS----SKXXGKGDGGKGXXXXXYQXXXXXXXXXXXXKSRKDWVRYDGAAMLLSSAGWSEDEDEEKEELITSEIEKFRQKQAERDKKLEDERRQELQRKIKXXXXXXXXXXXXXXXXXXXXXDREAREMVAMAAMKSRDDKDTAADQKKGGDEDGKKPSSPNGRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRERSSDRDGGXXXXXXXXXXXXDSRRDDHRDSDRGGGRSSGGDKDXXXXXXXXXXXXXX-----MEAKRAARAKLAEEETRKRRLAVLSALENAGNDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGGEGDAGKEGSESKVAAVVEKKGKARDKELVGSIPKDREELFAYEINWQMVEQHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFVLTKLGQRAKPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRAMERAQ 801
BLAST of mRNA_P-lacustris_contig12.1500.1 vs. uniprot
Match: A0A7S2CNP4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CNP4_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.060e-32 Identity = 62/106 (58.49%), Postives = 81/106 (76.42%), Query Frame = 2
Query: 2228 KARDKELVGSIPKDREELFAYEINWQMVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFIITKLGQRTPPQAILEELKLVLEEDAAVFMTKMWRMLVFCTLRAVE 2545
K RDK +V IPKD+ LF++ I+W +++ H I+ + MRPWIVKKI+EYLGEEEKTL +FIITKL Q + P AIL+ELKLVL++DA F+ KMWRML F ++ E
Sbjct: 36 KERDKRIVDRIPKDKATLFSFPIHWDVLDAHRIVATNMRPWIVKKIVEYLGEEEKTLIDFIITKLDQHSNPHAILDELKLVLDDDAETFVLKMWRMLAFHGIKLAE 141
BLAST of mRNA_P-lacustris_contig12.1500.1 vs. uniprot
Match: A0A835Z4I4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I4_9STRA) HSP 1 Score: 143 bits (361), Expect = 4.500e-31 Identity = 68/109 (62.39%), Postives = 83/109 (76.15%), Query Frame = 2
Query: 2228 KARDKELVGSIPKDREELFAYEINWQMVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFIITKLGQRTPPQAILEELKLVLEEDAAVFMTKMWRMLVFCTLRAVERAQ 2554
K RDK LV IPKD++ LFAY ++W +V +H I+ +KMRPW+V+KI EYLGEEE TL +F+ KL R PPQA+L+EL+LVLEEDA VF KMWRMLVFC LRA Q
Sbjct: 656 KDRDKVLVDMIPKDKDALFAYPLDWGVVTSHGIVANKMRPWVVRKIREYLGEEEPTLIDFVCAKLEARAPPQAVLDELRLVLEEDAEVFTVKMWRMLVFCALRAAAAPQ 764
BLAST of mRNA_P-lacustris_contig12.1500.1 vs. uniprot
Match: A0A7S2XWQ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWQ2_9STRA) HSP 1 Score: 129 bits (324), Expect = 7.900e-30 Identity = 57/106 (53.77%), Postives = 82/106 (77.36%), Query Frame = 2
Query: 2234 RDKELVGSIPKDREELFAYEINWQMVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFIITKLGQRTPPQAILEELKLVLEEDAAVFMTKMWRMLVFCTLRAVERA 2551
+ K+LV IPK++ LFAY++NW +V H+++ SK+RPW+ KKI EYLGEEE+TL +FI+++L +R PQ+IL+EL LVL+EDA +F K+WRML+F LR + A
Sbjct: 138 QQKDLVDRIPKEKRALFAYKVNWDLVHKHDVVGSKLRPWVSKKITEYLGEEERTLIDFIVSQLMERAHPQSILDELALVLDEDAEIFTVKLWRMLIFHELRIAQGA 243
BLAST of mRNA_P-lacustris_contig12.1500.1 vs. uniprot
Match: A0A7S3UVP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVP2_HETAK) HSP 1 Score: 122 bits (307), Expect = 4.000e-28 Identity = 56/101 (55.45%), Postives = 79/101 (78.22%), Query Frame = 2
Query: 2234 RDKELVGSIPKDREELFAYEINWQMVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFIITKLGQRTPPQAILEELKLVLEEDAAVFMTKMWRMLVFCTLR 2536
+ K LV IPK++ LFAY + W +V+ H+II+SK++ WIVKKI+E+LGEEE+TL +FI +KL P++ILEELKLVL++DA +FM K+WRML+F L+
Sbjct: 90 KQKALVDRIPKEKAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLK 190
BLAST of mRNA_P-lacustris_contig12.1500.1 vs. uniprot
Match: A0A7S0I375_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I375_9EUKA) HSP 1 Score: 107 bits (268), Expect = 5.180e-24 Identity = 50/100 (50.00%), Postives = 71/100 (71.00%), Query Frame = 2
Query: 2240 KELVGSIPKDREELFAYEINWQMVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFIITKLGQRTPPQAILEELKLVLEEDAAVFMTKMWRMLVFCTLRA 2539
K+L+G+IP R+EL+A + W VE ++ +K+RPW+ KK+ E +GEEE TL EF++ KLG+R P +AI EELK VL++DA K+WRML+F RA
Sbjct: 3 KQLIGTIPTKRDELYATPVGWDAVERGGLLAAKIRPWLGKKVAELMGEEEDTLVEFVVGKLGERQPAEAIEEELKKVLDDDAEGLCVKLWRMLLFEIKRA 102
BLAST of mRNA_P-lacustris_contig12.1500.1 vs. uniprot
Match: K3WIU2_GLOUD (PWI domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIU2_GLOUD) HSP 1 Score: 115 bits (288), Expect = 6.530e-23 Identity = 54/102 (52.94%), Postives = 72/102 (70.59%), Query Frame = 2
Query: 2240 KELVGSIPKDREELFAYEINWQMVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFIITKLGQRTPPQAILEELKLVLEEDAAVFMTKMWRMLVFCTLRAVE 2545
K L+ IP + ELF+Y I+W V+ H I+ +KM PW+ KKIIEYLGEEE TL EFI+ KL QR P+ IL EL+LVL++DA VF+ +WR L F +R+ +
Sbjct: 452 KSLIEQIPTETTELFSYPIDWMAVDKHKIVAAKMAPWVAKKIIEYLGEEEPTLIEFILKKLDQRAKPEEILTELQLVLDDDAEVFVKLLWRKLAFEAIRSEQ 553
BLAST of mRNA_P-lacustris_contig12.1500.1 vs. uniprot
Match: A0A183IM48_9BILA (PWI domain-containing protein n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183IM48_9BILA) HSP 1 Score: 108 bits (271), Expect = 1.140e-22 Identity = 51/120 (42.50%), Postives = 87/120 (72.50%), Query Frame = 2
Query: 2165 TAEDSKDVSESKVAAVVEKKGKARDKELVGSIPKDREELFAYEINWQMVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFIITKLGQRTPPQAILEELKLVLEEDAAVFMTKMWRMLVF 2524
T E+ + V ES++ A +KK K L+ IP ++ELF Y I+W T+N+I+ +++PW+VKKI+EY+GEEE +L +FI K+ ++ PQ+IL+++ +VL+E+A+VF+ K+WR+L++
Sbjct: 125 TEEEKRAVEESRLTAEEKKK---MIKSLIEKIPTSKDELFKYTIDW----TYNLIEKRLKPWVVKKIVEYIGEEEPSLVDFICQKVDEKASPQSILDDVSMVLDEEASVFVVKLWRLLIY 237
BLAST of mRNA_P-lacustris_contig12.1500.1 vs. uniprot
Match: A0A813JGK3_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JGK3_POLGL) HSP 1 Score: 103 bits (258), Expect = 1.190e-22 Identity = 46/101 (45.54%), Postives = 70/101 (69.31%), Query Frame = 2
Query: 2246 LVGSIPKDREELFAYEINWQMVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFIITKLGQRTPPQAILEELKLVLEEDAAVFMTKMWRMLVFCTLRAVER 2548
L+ +P D+++ F +EI+WQ V HNII+ K+RPW+ KK+ E+LG EE+ + EFI+ K+ ++ P+ IL EL+ L+++A F KMWRML+F LR R
Sbjct: 7 LIKQVPTDKKKAFEFEIDWQCVHDHNIIEKKLRPWVKKKVTEFLGNEEQGMIEFIMRKVTAQSKPEGILAELEGFLDDEAENFTLKMWRMLIFEVLRVKAR 107
BLAST of mRNA_P-lacustris_contig12.1500.1 vs. uniprot
Match: A0A2C9JYQ1_BIOGL (PWI domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JYQ1_BIOGL) HSP 1 Score: 110 bits (276), Expect = 2.940e-22 Identity = 55/120 (45.83%), Postives = 86/120 (71.67%), Query Frame = 2
Query: 2171 EDSKDVSESKVAAVVEKKGKARDKELVGSIPKDREELFAYEINWQMVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFIITKLGQRTPPQAILEELKLVLEEDAAVFMTKMWRMLVFCT 2530
+D K +S K A EK+ K K+L+ SIP +EEL+AY ++W +V+ N++ +++PW+ KKIIEY+GEEE TLTEFI K+ ++ PQ+I ++ ++L+E+A VF+ KMWR+LV+ T
Sbjct: 254 DDDKSMSGDKKATAEEKRQKI--KQLIESIPTAKEELYAYTVDWDIVD-QNLMDKRIKPWVTKKIIEYIGEEEPTLTEFICQKVVAKSTPQSIQNDVAMILDEEAEVFVVKMWRLLVYET 370
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 677.9 |
| Seed ortholog evalue | 5.6e-192 |
| Seed eggNOG ortholog | 2880.D7FJT5 |
| Preferred name | SNU71 |
| KEGG ko | ko:K12822 |
| KEGG Pathway | ko03040,map03040 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005685,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0010468,GO:0010941,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0019219,GO:0019222,GO:0030532,GO:0031323,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043484,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048024,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070013,GO:0071004,GO:0071010,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1903311,GO:1990904 |
| EggNOG free text desc. | mRNA processing |
| EggNOG OGs | KOG2253@1,KOG2253@2759 |
| Ec32 ortholog description | RNA recognition motif domain |
| Ec32 ortholog | Ec-06_010230.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03041 |
| Exons | 12 |
| Model size | 3283 |
| Cds size | 2394 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815514.7213016-UTR-P-lacustris_contig12:188911..189637 | 1622815514.7213016-UTR-P-lacustris_contig12:188911..189637 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig12 188912..189637 - |
| 1693493583.7841444-UTR-P-lacustris_contig12:188911..189637 | 1693493583.7841444-UTR-P-lacustris_contig12:188911..189637 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig12 188912..189637 - |
| 1622815514.8674412-UTR-P-lacustris_contig12:201989..202047 | 1622815514.8674412-UTR-P-lacustris_contig12:201989..202047 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig12 201990..202047 - |
| 1693493583.9188316-UTR-P-lacustris_contig12:201989..202047 | 1693493583.9188316-UTR-P-lacustris_contig12:201989..202047 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig12 201990..202047 - |
| 1622815514.8808308-UTR-P-lacustris_contig12:203689..203794 | 1622815514.8808308-UTR-P-lacustris_contig12:203689..203794 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig12 203690..203794 - |
| 1693493583.933258-UTR-P-lacustris_contig12:203689..203794 | 1693493583.933258-UTR-P-lacustris_contig12:203689..203794 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig12 203690..203794 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815514.7342682-CDS-P-lacustris_contig12:189637..189751 | 1622815514.7342682-CDS-P-lacustris_contig12:189637..189751 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 189638..189751 - |
| 1693493583.8020842-CDS-P-lacustris_contig12:189637..189751 | 1693493583.8020842-CDS-P-lacustris_contig12:189637..189751 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 189638..189751 - |
| 1622815514.747178-CDS-P-lacustris_contig12:190676..190853 | 1622815514.747178-CDS-P-lacustris_contig12:190676..190853 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 190677..190853 - |
| 1693493583.816986-CDS-P-lacustris_contig12:190676..190853 | 1693493583.816986-CDS-P-lacustris_contig12:190676..190853 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 190677..190853 - |
| 1622815514.7598708-CDS-P-lacustris_contig12:191095..191199 | 1622815514.7598708-CDS-P-lacustris_contig12:191095..191199 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 191096..191199 - |
| 1693493583.830686-CDS-P-lacustris_contig12:191095..191199 | 1693493583.830686-CDS-P-lacustris_contig12:191095..191199 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 191096..191199 - |
| 1622815514.7691927-CDS-P-lacustris_contig12:191914..192698 | 1622815514.7691927-CDS-P-lacustris_contig12:191914..192698 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 191915..192698 - |
| 1693493583.841071-CDS-P-lacustris_contig12:191914..192698 | 1693493583.841071-CDS-P-lacustris_contig12:191914..192698 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 191915..192698 - |
| 1622815514.7790713-CDS-P-lacustris_contig12:194352..194475 | 1622815514.7790713-CDS-P-lacustris_contig12:194352..194475 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 194353..194475 - |
| 1693493583.8502753-CDS-P-lacustris_contig12:194352..194475 | 1693493583.8502753-CDS-P-lacustris_contig12:194352..194475 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 194353..194475 - |
| 1622815514.791771-CDS-P-lacustris_contig12:195006..195351 | 1622815514.791771-CDS-P-lacustris_contig12:195006..195351 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 195007..195351 - |
| 1693493583.8599303-CDS-P-lacustris_contig12:195006..195351 | 1693493583.8599303-CDS-P-lacustris_contig12:195006..195351 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 195007..195351 - |
| 1622815514.8031118-CDS-P-lacustris_contig12:197448..197595 | 1622815514.8031118-CDS-P-lacustris_contig12:197448..197595 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 197449..197595 - |
| 1693493583.8692284-CDS-P-lacustris_contig12:197448..197595 | 1693493583.8692284-CDS-P-lacustris_contig12:197448..197595 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 197449..197595 - |
| 1622815514.8181987-CDS-P-lacustris_contig12:199777..200216 | 1622815514.8181987-CDS-P-lacustris_contig12:199777..200216 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 199778..200216 - |
| 1693493583.8788664-CDS-P-lacustris_contig12:199777..200216 | 1693493583.8788664-CDS-P-lacustris_contig12:199777..200216 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 199778..200216 - |
| 1622815514.832361-CDS-P-lacustris_contig12:201064..201112 | 1622815514.832361-CDS-P-lacustris_contig12:201064..201112 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 201065..201112 - |
| 1693493583.8940463-CDS-P-lacustris_contig12:201064..201112 | 1693493583.8940463-CDS-P-lacustris_contig12:201064..201112 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 201065..201112 - |
| 1622815514.8469336-CDS-P-lacustris_contig12:201172..201268 | 1622815514.8469336-CDS-P-lacustris_contig12:201172..201268 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 201173..201268 - |
| 1693493583.9016922-CDS-P-lacustris_contig12:201172..201268 | 1693493583.9016922-CDS-P-lacustris_contig12:201172..201268 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 201173..201268 - |
| 1622815514.8576531-CDS-P-lacustris_contig12:201972..201989 | 1622815514.8576531-CDS-P-lacustris_contig12:201972..201989 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 201973..201989 - |
| 1693493583.9093268-CDS-P-lacustris_contig12:201972..201989 | 1693493583.9093268-CDS-P-lacustris_contig12:201972..201989 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig12 201973..201989 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig12.1500.1 >prot_P-lacustris_contig12.1500.1 ID=prot_P-lacustris_contig12.1500.1|Name=mRNA_P-lacustris_contig12.1500.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=798bp
MGHGTRYGPRHGRARHGRAGHGRTRHGRTRHGRAGNGRGMGARHVHGREG CEPRHGRPRSRLGRGCSPPPPRLPPNLPALQGMGNHPGGGGGPDNRMGRG GMNGPNGNMGGGTTNGGPASAHSAGGRAGGGGGDGGGGPSINVYVGKLKA EADNTLVQELLMCCGRVEKWNRAVDPSTDLPKAFGFCTYYNAQAAAVAVQ LLNDLELAGQAILVKVGKKEQPSLEAFLEPKDEKYSKKHKVLLDAVKAKI DSVLVKYGERSAPDKGASKDGDANSAGGKSPVSVGASSPPRSSDGGGGSG ASKAGRGDGGSGYQQQGAVGRKPKSWVRFDGAAMLLSSAGWSDDEDEEKE ELITSEIEKFRQKQAERDKKLEDERRQELQRKIKDAQRREKQKEEDAKRR EQASRDREAREMVAMALMKSRDDKDAAEDLKKSGSDGNNATKASSSSDNN RDRDGRGQDRRRSRSRSRSRSRSRSRSRERKRGRRERSPDRDGSRNRSPD RHRGDRDSRRDDHRDSDRGGSRSSGGGDKDKNGAGGGSGGGSSEKEKGIE AKRAARAKLAEEERRKRGLAVLSALENAGNDRDDSDGGGNGGAAGNGTAL STEDDKQRKEELRRRKAVLAALGDGMLDSDDDDGDEEEEEEEEEEEEKKP TVSPGSLGAAATRVEDGTAEDSKDVSESKVAAVVEKKGKARDKELVGSIP KDREELFAYEINWQMVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFII TKLGQRTPPQAILEELKLVLEEDAAVFMTKMWRMLVFCTLRAVERAQ* back to topmRNA from alignment at P-lacustris_contig12:188912..203794- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig12.1500.1 ID=mRNA_P-lacustris_contig12.1500.1|Name=mRNA_P-lacustris_contig12.1500.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=14883bp|location=Sequence derived from alignment at P-lacustris_contig12:188912..203794- (Pleurocladia lacustris SAG_25_93) ATGCAGGGAGGAGGACCACCACGCCCACCCGGAGGTCCCTACGGAGGGCC
GCCCAACGGAAACCAGGGGGATATGGGCCGCCTCGAGGCATGTGGCCCGG
CATGGGTGAGCGCGAGAGGATACATACATACCACCACAGAGTTTAAAGGC
GTTTCTCTCCCGTGTTGCAATCGCAAGGGCGGTTCTCCTTTCTGCTCGCG
TTCCGTGGTGTGGTGATAATGCATGGTTGCTCTGGTGCTCCTTCCGGTTG
TTTTGGTGTCTCGGCATCCCACATCTTTGTTGGTTGCTCGCACGTGTAAT
CTACAAGCAGGCTTTTGGGGCGAGTCGTACAGACCGCCGTGGTGTGGATG
CGAACTGGGCAGGGCAACGCCCGGTACATCACGTAGGCGCGGCGGGAAAA
GCGGTTTCGCTGCTGTTCAAATTTGTGCTAACTGCCCTTTTGTTCGATTT
TGGGTACTCCGCTGTCGACCTTGGCCTATTGTATGGCATAGGTTTGGCAA
AATGGTCAGGGTAGACTTGGCTTGGCCTGCTGTTACTCAAGGTGGCGCCC
TACATGTATCATGTCAAAGTACTCGAGTACTATTCTACGGTGAAAGGAAG
GCTCAGGTTTGCGTATGGAGTGCTCATGTACCCGACCTTTACAAGCAGTG
ATCAGTTATCAGCTCCTCTTGAACCATCCCTAAGGCGTATTGTGAGCGAT
CGCTCAGTCGGATCCATTACCTCACAGCACATCACAGCACTCCTACTTGT
AACGCTGCGTTGTCCATTGCCAACGGTTAGCACTGATGTTTAGCAGGGTG
TCCCCCTTTCTTCCCTCAGCTTTTCGCAGTCGTCAGAGCTTGACAACGTG
TCAATGTGGGGAAGATTGTCCAACCCGGCACACCTCGAGTTGAAATCGCG
AGCGATTATATATTTAATTCACAGCAGTACTTACCCCCGCCGTTGCCAAA
AACGCACCCGAGCAAACCTCGTGTGCCACACACAAATTCCACTATACACC
AAACAAAAATCGCCTAAACCGACTGAGCTCCCGGGCAACGGACCATGCCT
GGATTTTGCTACTAGCACTCCAGCTCTCTGGGAACTCGGGACCTCTATTA
CAGACCACGAGGATGTTATCCAGGGTGTTGGTTTACAGTAGTCTCACGAT
CACCGAGCGTAAGTTATGGAAGTGGTCCCGGGTTTGCAGCTGCTGTGGTC
TCTTTCAAGACAACGATGGGCGCCTCCGCACGCACTCTCTCTCCCGCTGC
CCGCTTGGAGATCCTGTCTATCTCTACGGGTAAAAACCGTGATGCGCCTC
TGTCATTGTATTTGAGTGCTTCGTGAGAGGTGGTCCAATCTTTTGGATTC
GTAGCACGGCACCACAAGGGTGTCTTGACAATGACCTCCGTTGCGTGCGG
TTACAGGCACGTCTCCAGTGCAGCCATCCCATGACATCCGCTGTTTATTG
CACCCCGGCGCTCCAGGAGATGAAATCTGTAGCCCGCGCCCACCTCTGTA
AGTGATTGCCTGAGTCCTTTTTGTGGCGATAGTGCGCCACGGGGTATGTT
GAACAGCATCTCGAAAGTGCCAGCTGATACATACTGGAGTATCTATCTCC
TAGCGTGGAAGAATCCAAAGTTTCGTCGGAAACAACCCGGTACACCTTCA
TATTCCCCACAATCCAACCGGTCAGAACGGAAACTTCCGTGATTTCAAGC
TGATAACCTAAACTACAACTCTGCGTTTTCTCGTGTCGATTTCTCAGGTG
GTATGGGTCCCGGCATGCACGGAGGCGGGCCACGGTATCCCGGAGGAGGA
CCGGGATGGGGCATGGGACCCGGTAAGAAGGAGAAGAAGTGTTCTCTTCA
GTGGTAGATCTGCTTTGGTGTTCTCTACAATGATAGATCTGCTTTGGTGT
TCTCTACAATGGTAGATCTGCTTTGGTGTTCTCTACAATGGTAGATCTGC
TCTTAGGTGTTCTGGTGGGTTAGTTCGTGCGGGAAGCACGGCCACAAATG
TGCGACCAAGGTAGACGGGTCTCTCGCCTCCCCCGACTCGAGTGTTGGAC
GGAAGCCAAACTCAACGGATGGGAGAGGCGGTTCTTGCGCGTGCTGTTTT
CATTCACTCTCTGGTGCTTCGTTGTTTGCCCGATGCCAAATGAGAGGGAG
AGTGTGATATAACCTTAGAACTGGCGGGACAAGCATGCGAATGCTCTTCT
CGCGAGCTCGCGCGTGTGTTTGCCGTTGTTTTTCCTATCGTCGTGGCCTC
GAAAATTCGCTCATCGCACAAATATAGGAAGCCTGCGATCAGAAGCCAGG
CGGTAAACAAGCGTGTGCGCCAGGTACAGAACTTGAACCAGAAACAAAAC
ACGCTCACAGAGGGCAACGCCCGAATGAGAAATCGCTGCCACACTTGGCA
AAAAAGAACAAATGTTGTTTCCTTGGTTGTTTCCGTGCGTCAGTCCTCGT
CCTCCCTCTGGCTGGCTCATCGACCACTTGTTATTTTCCCTTCTGACTTC
CAAATCATCCAAACCAAACGTTGAAGGTATGGGCCCAGGCATGGGCGGGC
CCGGCATGGGCGGGCCGGGCATGGGCGGACCCGGCATGGGCGGACCCGGC
ATGGGCGGGCCGGGAATGGGCGGTTCGGGCATGCCACATCCCGGCATGCC
ACATGGGGGGCCCGGTTGGGGGCTCCGGGAAGGGGAATGGGGGCCAGGCA
TGTCCATGGGCGGGAGGGGTGTGAACCAAGGTGGGGCTTGATGAAGACCT
TTTTGGATTATTTTCACTATGCGTTGACGTTGCTACACAGACGAACCACG
TCGTGGAGTTTGGGACCTTTCTGGTGTGAGTAATTGCTGTTGCTCGATGA
ACTTCCTCTTTTGTTTGTTGTTTGAGACTTTGTGCGAGGTTACCAGACCG
AAGGCCTCACCCTCCTTGGAGCACGCAGAGGGTACCGGCAGCCTATACCA
CGTGACGCGATTGTGCGCGTCCGTGGTGCGGGTTTCACTTCGGAACCATT
GGTGGTTGCAATTGTCGTTGTCACAACGCAGTCGACACGAGTTGGCAGTA
CATGATGGCTAGGTTTGGCTCCAAGCCTGAATCTGAAAAAAAAAAAAAAA
AAAAAAGTCAGCCCGCGAAGAGGAAGAACCTATTCCGTTTTTATCCTCTG
AACAGATGTTCATGTAGGACGAACAGCAGGCGTGACCGATATCCGACCGA
TCGGTGAACCAAGCCGAGGCTGTCAGCAAAAGCCACGGGACCTCTCACAC
CTAAGTTATAAGGTTTGCCATGTGTCACGAGCCCCGTATTCCGTCGGTTT
TCAAGAGTAGATCAATGGCTAGATCGCGTAGCGCCAAGTGGAACTTGGGT
AGCGGCAGAAAAGGCCGGAGCAGGGTACCGACGTCGGTGTGTCCTAGTGC
TCTGTGTGCCTGTGGAATCCATCTTCGTTTTCGTTTCGATCAAAAGTGTT
GGGTTGGGCAGGAGAATGCTTGACAGCACCGGCGGCATCATCGCGACTAG
CTCCGACTCGCCGCTTGCTCCCTCCTCTTTCTCCCCTCTCAAACGTCCGG
ACGTTGGCGTATGAAATCCGAAACAAAGGCATGGGCGGCCGAGGTCCCGG
CTTGGCAGGGGGTGTTCGCCCCCCCCTCCGCGCCTCCCCCCCAATCTTCC
GGCTCTCCAGGGCATGGGAAACCATCCGGGCGGCGGCGGCGGACCTGACA
ACAGAATGGGGCGTGGTGGTATGAACGGACCCAACGGCAATATGGGCGGG
GGTACGACAAACGGCGGTCCCGCATCGGCTCACTCGGCGGGAGGAAGAGC
CGGCGGCGGCGGCGGCGACGGCGGCGGCGGGCCAAGCATCAACGTATACG
TCGGCAAGCTGAAGGCCGAGGCCGACAACACGCTGGTGCAGGAACTGCTC
ATGTGTTGCGGGAGGGTAGAAAAGTGGAACCGGGCGGTAGATCCGTCGAC
GGACCTGCCCAAGGCGTTCGGGTTTTGCACGTACTACAACGCGCAGGCCG
CGGCAGTCGCGGTGCAGGTGAGCGCGTGGGTTGCGGCTAAGTCCACTCAT
TTTGAACGAAATTTTTGTGAGAAAGTGGTAAGGGGTATGCTGGTAGAACG
TGTGCTATTTTTGAGCCGAGCATGGATACACCAGAATCACATACCTGCAT
GTTGAATGAAGGGGGCGCTTGAATGGCTTGCGTTATTGAAATCTGGTCCC
GTTGGTCTCGCTACCTGTCGATCAACTCCACAATCGTATCACACGTAAGC
TGCAAATAGCTGCGTGTGCGTTTCGTTTTTGCTAGCCCTGGAAAAGCTTT
TTGCGTCGCTCTTGTTGTTGTTGTTGTTGTTGTTGTTGTCTTGACATTAA
AAGCGTTCCGATCTCTACTCTGTGCCTTCTCTCGTCTGTACTGGTCCAAC
TGGTGCGGTCGACTTCCGTGGTCACAAGTTGATTCCCCCACGGGGGTTCT
CTCGGGAGCGATGTTGCTCGAAAGACATTGAGTGACGGACGAGGGGCACC
TTCATTCATGGATTCAGCGCTTCTGTTACTGGACTCTCGTCCACTTGAAT
CGCTTTATGCCTGCTTGAATCGCTTTTGAGCTTGGCTCCCTCTGTTTTTC
TGTTGCCCCCTCTTCGCTTTCGTTGATACGGAGTACTTTTGTATGATACG
TGATACGTGATTACTCGTTTGTGTTTATGAATGCGACAAAAACACCGCCG
AATGCATCGTAGATAGTGAGGTTCTCAGACAACCCGTGGGAGATCTCTCG
AGATTTTCATCTAACCTGTTTGTGAAGGTATCCGAAAAAGGGTGTTACGA
ATAGAGCAGGTGCTGGCAATGAATCCGTGTATGCAGGTTCACGGGCCCCC
ACAGCACTGCTAGCTCACTGTCACACGTTTTTTTCCTTTTCCTCCTCTCT
CACGTTCACGAGGGGTTGAATGATGGATTTCCCCGGTGTGTAGTGCACGC
CGCGCACGGAACAAAAAACCTCGTCCGCAGCGCAAATCTGGGGAACAGTC
CGTTGAAGCTGTCGTCAGCGGCAAGTCACCGTGAGTGTTCTCTGTTTCGC
CGCAGGACGCACCATCAGTATTCGTTTGGCTCCATGGTTCCTGAAGCGGT
CTCCGGTCTTTGGTCAAAGCCACCATCATCATATCATCTTCACATAGGAA
AGGAAAGCACCGGAGAGGTGAGGTGACCTCATCGCCGACTTTGAGAGCGT
CCCACGTCCCTTGCAATCAGCTTCGTGGGACGCTCTCAACGTCGGCGATG
AGGTCGCCACCCCTCCATGTCCTTCCTTTGTGAACAGGTCTTGATGGCGA
TGGCCTTGATGAAAGACCGAGAACCGCTCAGGAACTATGGAGCATTGAAA
AACTGATGGTGCTTCCTGTGGTGAAACAGATAACACTCACAGCGACTTGC
CGCTGACGACAGCATGAATGGACTGTTCCCAGGGTTTACGCCGCGGACAA
GGTTCTTTGGTCCGTGAGCGGCGTGCAGTACACGCTGGGGAAGTCCATCA
TTCAACCTCTCGTGAACGCGAGAGTGGAGGAGTGGGAAATATGTGTGACA
GTGAGCTAGCCAACTGATGTGGGGGCGTGTGAACCCGCATACATGAGTTC
AGTGAAAGTACCAGCTCTATCTGTACCATCCTTGTCGGATGCCTTCACAA
ACAGGTTGTATGAAGACATCGGGAGATCTCCCACGGGTTGTCTGAGAACC
TCGCTATCTACGAGGTGTAATAGGTTTTCTGTGGCGATGGTTGGTTCGAT
CTCCTTCCGACCCCTCTCCCCGCCTCATGTCACCTCGTCTGGAGGGCCTC
TTTTCAAGGCTAAGAAATTCCAATTCACTGCCACTGCCGTGGTTACCTAG
GTGACCCAAACAAATAGGACCCCACAAATAAGTTCCCACCAGTCGCGAAA
GCATCAAAATCTCAAATCTCAAAATCTTCAATGTCTAAAATAAACAAGAC
TAGGTCTAGGAACGCGGCAAGGCAGAGAAGGCATTCGTTTGCTCTACGAT
TTCGTCGCCCTTGGCTTTGTTTCTTGTGCCTCTGTGTCTTGCTCAAGACC
TCTTGTACCCGATGACAGCCTTGTCCCCTGTCCCCTGTCCCCTGTCCCCT
CGTTTCCCCTTCCGTGCTGTTTTTTGCTGTTCTATTCTGCCCACTTGGTC
CTCTTGTCTCTTGTCCCAATCTTGCGTCGATCTATCTCGCTAATCCCAGC
TCCTAAACGACCTGGAGTTGGCCGGCCAGGCTATTCTGGTCAAGGTCGGG
AAGAAGGAGCAGCCATCCCTGGAGGCGTTCTTGGAACCGAAGGATGAGAA
GTACTCCAAGAAACACAAGGTTCTTCTCGACGCGGTCAAGGCGAAGGTGA
GGTTTGCTAAGGCTTGCTAAGGCGGCTGACTCCAAGGTGGCTGAACGAAC
CACATGCATTAATCAAGCAATCCAAACATTGAACCCGGACAGAGTCGCGT
TTACAGCTTGGCGGATTTTGTAGATATATTTATGCCTTCTGTTGAGTGTT
GCACCGGTCCCAAGCCACTGAACAAGTATTGTGTACGCTGGTGCGATGAT
GTTTGTAACGGCCGTACGTACACCACTGAAAGTGAGATGTCGCGTGATCA
CCTTCGAATGTATGGATGTGGGTGCTAGCCCCAGAGCCGTGTGGGGCAAC
AGTTTAAATGAACAAACGTGGCTGGTTGAAGTTGCGAAAATTGCGTCGGG
ACTTGAAGGCGGAAATGTTGTGTTCCATCTTGTCGTGCGAAAACGACGGT
GATCATGGAAGTACAATGTGTATGGGATGGGTGATGGATGGCATTTTTTT
TTTTTTTTTTTCCATCCCATCTATTCTGGACGCTAGCCTGCCCTATACCT
TTCGGCGATATGGAGGGTGGCACCCAGCCGGGGTTACACACAAGGGCTCC
TCTCCTGAGCCCCCACCCGCCCTCCTGCCGTACATGCCTTAATTTTTATC
GCGAGAAGGGTTCAGCTGTTCAGTTGTCCCTTCCCCTCGTCGAAATTAGT
AGAATTTTGCATACTCACGAAATCCATCGCTTTCCACTGCAAAGTTGGGA
AAAGAACCACCCGCAGAGGGACCACATGAACTCCGGACTTGCCGCTACTG
TACTAGGTTTAACGAGGTAACCGCTCGACCTCCGGGGCAGTGGCAGTGGC
AGTGGCATTGCGACGTGTTTTATCACGAGGCCAAAAAGGGGCTGAACAAT
CGACCCGCTCCAAACAAGTTGCGTAAAAATAGGAGATGTTGGCCGGTCCT
GTACGTAGATCGATAGCGGTTCTGGAAACACCAAAAGTTTCATTGGCGGA
AAAATGGAAAACCTCGAAAGGGACAGCCCGGCTCCGCTATCTCCGCTATC
TCCGCTATCTCCGGAGGTGCAGGACAACGATACAGACCATTTCTCGTTCT
TAAAAGTACCAGGTTCGGTAGGCTCCCTCATCCTTCATACACATGGTGCG
GGCCATCTGCCTTCCTCTGTATTGACAGTGCGATGTCTCTTCACGCCCGT
TTCGCATACATAACTTGGTACTTGTATCCTTCAGAAGCGCCCCTCGGGTC
GCTCTAAGACTGCTGTAGTAGTGGAAAATAATATCTTGGGAAGTTATCAG
AAGGTGGTGGGGGCGATCCCTCCACAAAAAACTCTGGACGACAAGTCCCG
AAGGTCTTGTATATCTATCTTCTTCTTTTTTCGGGTGCGCCCTCCGCGTA
CCCCCACAGACACACGTTTAAGCCTGACGTTGTTAGTTAGTGGAAAGAAT
GGATGGCTTGGTTCTTATTGCGAATACCCCATGGGGCAGTCAAAACAAGG
TGAACGAAAAAATGAATAAATCCGGGGGTGGGGTGGCAAACCCAGGTAGT
GGGACGAAAATGAAAGCTATTCTCCTGGGCGTTTTCCAAGTCTTTTGAGT
CGACGGCCGGTGTTCAGGGGGAGGGCGCGGGGGTTCTCGAAGGATATTGC
GCATGTTGCTGATCCTTAATTTTTCTTCCGTTTAGCCGCATGGCGCTTAA
TCCCCGCACGAACTCGTAGTGTTTGTTTAGTTTACAGCCCAATTATGGAT
GTCTCGTGAGCCCTTTTCACAAGAACGAAGCGCACTAAGCCTTTCTGCTC
GACGCTGTTAAGGTCGCGATGGCCATTAACGTCAAGATGCCGCTGACACT
GACTGATACTCACAGCGTTAACCTTTTGGGGATTCGACGATTTGGAAACC
CTGTATTGCAATCCCGTGGTGGAAAGGGAAGCCTTTGACGGGCACCCGTT
TCTGGGGGAATGCAGGCCTAGATGTAGGCTGGGCATCAACGCCGTTACAC
TCAGCTTGCAAGCCAACCCGCTTCCGCGCAAGAAATGTGAGCCACTATAT
ATGTCCGGGTGATTCGATCCCCGACCCGCGTCCACGTCCTGACATGATGT
CGTCTTGTCCTACTGTTAACCCCCCCGCCTGGACACCCCTCAGATCGACT
CTGTTCTCGTGAAGTACGGCGAGCGCAGTGCCCCCGACAAGGGCGCATCC
AAGGACGGCGACGCCAATTCCGCCGGAGGGAAATCTCCCGTTTCAGTCGG
CGCCAGCAGCCCTCCGCGCTCAAGCGACGGCGGCGGCGGCAGCGGCGCCT
CCAAGGCTGGGAGGGGGGACGGCGGCTCCGGGTATCAGCAACAAGGCGCC
GTCGGGAGGAAGCCGAAGAGCTGGGTGAGGTTCGACGGGGCGGCGATGCT
CCTCAGCAGTGCGGGTTGGAGCGACGACGAAGACGAGGAGAAAGAGGAGC
TCATCACAAGCGAGATCGAGAAGTTCAGGCAGAAGCAGGTGCGGCGGAGG
GGCTCCGGGGTTGTGTCGGGAGATAGCGGGTATGTATGTGCACACCCGTT
TTCGCTTATTTCGTTCCTTTGCGCCCGAGCCTTGTAGCCATGTGGCCGCC
GTTGATCGCGTATAGGTTGCGTCGCACTCGGGATGTGGCACTGGCGCCAT
AAACGTGGGAAATCATTCTTGGTCAAGCTCTCAAATGACGCGGGCATCTG
CAGCAAGTACACCAGGTCACAAAATGAAAGACACTCAGTAAACAGTGTTT
GTGCGGGTGTTGTTTCTTGCTCTCTACTGGTATGCCAGAAAGGAAAGAGT
TTCCTGTAAATAAAGCCTTCCTCGTGTGAAACCCCGGCTGGTACGCCCGC
CGATGTAAACGGGCAAAAGGTGCGTAGGCCAGCGTCCAGAATAGGCGAGA
TGAGAACGCGCACACCGCTAGGACGGACGACGTCTTTTCATTGGTCAGCA
GGATAGCACGTTCGAGGCTAACAAATGAGACACACACACTCACGGCACCG
CCAACGGCACACACCACAGGCGGAGAGGGACAAGAAGCTGGAGGACGAGC
GGCGGCAGGAGCTGCAGCGCAAGATCAAGGACGCGCAGAGACGGGAGAAG
CAGAAGGAGGAGGACGCCAAGAGGAGGGAGCAAGCTTCCCGGGTAAGAAA
AAAAGAGGATGTCGTGGCTATGGAAGTTCCCATGCGTGTCTACAATGTTT
TGGCGGTGGTCCTTGGTCTGGTGAGAAGTGGCTATAGAAGCCCCCGTGCG
TGTCTACAACACATTGGCAGTAGCCCTTGGTCTGGAATGTGAAACCATAC
TGGAAGCGTATCGTGAAGCGTCGAATAAGAGCGTTGTTAGTTGTCTTGCT
CACGGTAGCGGTGGTGGTGGCGGTGGGGTTTCGTCCGCCTTGGTTGGGAT
GTCGATGTGGCGGTTGACGTGACGCTCGTGTTTTCCCGCCGTGCAGCTAA
CGCCTGCGGCGTGAAAGAAGTCCTTCTTGGGAGCTACACGTAGGGGATAG
GGGATGCCGGTTCGTCTCACTTCACTCCTCGTGCTCATGCTCGTGCATCG
CTGGCCGCTGGCCCTGTTTGGTTTCTGTTCGAAGATTCGGGGATATTTTG
TTGTGTCCCCCCTTCGGGAGTGGGTGACGGTGACGCGGTGTCGTTATGTC
TCCCGATTTTTTTGTTTGTTTTCTCTGGGTGGCTTTGTACCCAGTTACGG
AAGTGACGAGGAGTTGTTGTTGTTGTCTTGACGTTAAAAACCGTTCCGAT
CTCTGCTCAGTACCTTCTATTGTCCGTACTGGTCCAGCTGACGCGGGCGA
CTTCCGTGGTCACAGGCTGACTAAAATGGGGTATATAGTAATATACTCTA
CTGAATAGGACGCAGCAGTAGTGCTACATGTCGTGCATAAATCGTCATAG
CTACCCATGCATTGGATCCGTCAAGGTTGAAGGCGAGCAAATTACTTTGA
GGGTGCAGTCCGGGTGTGAAGTTGAAGATGACTGGTTCTCCGTGCGACTG
CTGTGCACCCGACGTCTTCGCGTAGGCAAGGACGAGAGATACAGTACACT
GAGAGAGTAATCGAGGCAGGCAGACAAAAGGAACTTGAGTATGCATTTGG
GCACCACTCAAATGGTGCAACAAAAGGGTAGTGAGTCCCGAGCATGTCGA
CCTTGTCATTGTGTCATTGTCACTGCACGAAAATTCTCTTGTGTCATTGT
CACTGCACGAAGAAGAATCTTCTTCGCGTAGTGACAATGACACAATCACA
ATAACAAGATCGACATGCTCGAGACTCACTACCATCTTGTTGCACCAGCT
TGCGTGGTGCCCACATTGCATTCTTAGGTTCGTTTGTATTGCCTGCCTGC
CTCGATCACTCTCTCAATGTACTGCACCTCTCTTCTTTGCCTACTGGGTT
TTGAAGACGTCGGGTGCACAACAGTCGCACGGAGAACCAGTTTTGTCATC
TTTAAACTTCACACCCAAACTGCACCCTCGAAAAAAAGTAATTTGCTCGC
CTTCAAGATGGGTTCAATGGATGGGTAACTAGCACTACTCTTAAATCACT
TCCTTTACTGCGTACAACACCGCCGACAGCAAACTAACAATCTCTGTCTG
ACGCCGTCTGCTGTCCTCTGTACGTGTACAGTATTTTTTTCTTCCCCAAA
AATCATCACCGAATTCACACGACGCGTTTCTCGAATCGACGCGCTATTTG
ACCGACCTACCCCTCCGAGGTACATTTCACTCTCTTTTTTCTTGTTTTTT
TCAAGTGGGCATTTTTTTCATTTTTCCCCCTTCCGTTGCAACGCAGGACC
GAGAGGCGCGGGAGATGGTCGCGATGGCCCTGATGAAAAGCCGCGACGAC
AAAGACGCGGCGGAGGACCTAAAGAAGAGCGGTAGCGACGGGAATAACGC
TACCAAAGCGTCCTCGTCCTCAGACAACAATCGGGACAGGGACGGCAGGG
GACAGGACCGACGCAGGTCTAGATCCCGCTCTCGCTCTCGTTCTCGGTCT
CGCTCCCGCTCGAGGGAGCGCAAGCGAGGACGGCGGGAACGTTCCCCGGA
CCGGGACGGCAGCAGGAACCGTTCCCCGGATCGGCACCGAGGAGACCGCG
ATAGCAGGCGCGACGACCACCGCGATAGCGATAGGGGCGGCAGCCGCAGT
AGCGGCGGCGGGGACAAGGACAAGAACGGTGCGGGCGGGGGGAGCGGCGG
CGGCAGCAGTGAGAAGGAGAAGGGGATAGAAGCCAAGCGAGCTGCGCGGG
CGAAGCTCGCGGAAGAGGAACGGCGCAAGCGGGGCCTCGCAGTCCTGTCG
GCGCTGGAGAACGCCGGCAATGACAGAGATGACAGCGACGGCGGCGGCAA
TGGCGGGGCGGCGGGGAACGGGACGGCTCTGAGCACCGAGGACGACAAGC
AGAGAAAGGAGGAGCTTCGGAGGCGCAAGGCCGTTCTCGCAGCCCTCGGT
GACGGCATGCTGGACTCCGATGACGACGACGGTGACGAGGAGGAGGAAGA
GGAGGAGGAGGAGGAAGAGGAGAAGAAGCCGACGGTATCACCGGGTTCAC
TGGGGGCGGCAGCGACGCGCGTAGAAGACGGTGAGATGAGCGCAGGATTC
AAGAACAGTGTGAGGGCGGCAAGACGTGCTTTCTTACATACGGAGTACCT
ATTTCGGGTGGACCTCCTTCTCAGCCTCACTCGAGTGCCCTGCACATTAC
GTAGGACGAAGTCGATGACAGTGCCGTGCGATGGCTTCGCCGCCCGGGGC
ACTATTCGCTTTGTCAGTGGCCGTTCTGGGGCACCGTTTGGATTTTGTCG
TGTAAGCGCCCCCGCCCTACGGTATTCTTCGCCGATGCGACGTGTTTTTC
TTGCATCCGTGATTTGTTTCTTTGGTCTTCCCATCTATTCCGGACGCTAT
GCCTTTCTTACGCCTCTCTGTGATTGCAGGGTTAGCACCTAGACCGGGTC
ACACAGAAGTGAGTGCGTCCACAAAAGTATTGAGAGCAACATCGCCGAAT
ATCCAAGGGTGCCTTTTTTTTTTGGCCTTTGGTTGCCCCCCAAATTGTAA
CAGTTAACACGCTGTTGTTTTGTTGCTGGTGTTGTTCACCCATGTTATCA
CTCGCTAGCGCCAGGCCTGTCGTGTTGACGCCACACGGATATCGGGCAGG
CATCCCTACCTACCTCCCCCTCAGCAGTTGTGCTCACTTGTTTTAGCATG
CTGTGTGATTTTTGGCAGGGCATCATAATTGTCCCTGGCCGCCTGTGGGG
CTTATCGCATGTCGTGTGCATGTTTGCTTGTGGCGAACACTCCAGGAACC
GCCGAAGACAGCAAGGATGTGTCCGAGAGCAAAGTGGCCGCAGTCGTGGA
GAAGAAGGGCAAGGCGAGGGATAAAGAGCTGGTCGGCAGCATCCCCAAGG
TACCGGGAGACCTTTAATGCTCGCTTTCCGAACCACGTGTATTAATCCTT
CCATCACGGGGGCGAGTCAAAGCAATGGATCCGCCTACCTACCAATCTGG
TGGGACCCAGGTCACCAGATTCCATCCAATAGCAAAAGATTATTTGCACC
ACTGCTCTCTTCGGTCGGTTTGTCTGTACTGATCAACACGACGATATTGG
TCCCCCGCTTTGAACGCCTCCGTCGGCCTTTGTTTGAGTAGGATCGCGAG
GAGCTTTTCGCGTACGAAATCAACTGGCAGATGGTGGAAACCCACAACAT
CATCCAGTCCAAGATGCGGCCGTGGATCGTCAAGAAGATAATCGAGTACC
TCGGGGAGGAAGAGAAGACACTCACGGAGTTCATCATCACCAAGCTGGGC
CAGCGCACCCCTCCGCAGGTGTGACCGTGACCGTGTGCATGTTTGTTTGT
CTGGAATGATCCTTGTATTTGTAGTAGGCATTGACCGATGGCGCTAGCCG
ACCGACCAATGACAATGCGTCAGGCTCTGCGTTACAGGCTCAAGTATCGA
TGCCGTGGATTTTTGGCATGTGACGTAAAGTACAAACCAGTCCAGTCTCG
GGTTCGTACGAGAGCGAGAGAGCGAGAGGGGCGATAGGAAACGTATCGCA
AGGGTTGCGAGCCAAGGGGAAGCTGGCCTGTGTGCTTGAACGCGGTTGAA
CGCGGTTTCAGGGCTGGCCGGCTCTGACGTAAATATATCATCATGGCAGA
AGATGTCCGACAGGCTATCTGGCAACTCACAATCTATGCGTCAGAGCGTT
GTGGTGAGCTACGTCGTGCGGTTTTCCCCTGCTGCCACGAAATCGCATAA
TCAAAGACGAGTCTGCGGGCCCTCCTCGATTGGATGAAAAGGTCCTACAA
TCAAAGCTGTAGCTGATAGTCTTGACGCATTCGAACCACGTATGTTACTC
CTAATAGTGCTAAACTGACTCCACCTTGCGACTGATAGGCACCCCTGGCA
GCTGAATTTGCACCATGTCGCGTAGACTCGAAGCACATGGTGTAGACACA
TCAAAACCTTCACAACGTAACTGGATGTTGAAGATGGCACGTGTCATGCT
GCAGTTGTCCTCTATGAGCCTTTGGAGGATCGAGACGTGCTTGTTCTGAC
CCATCCCACGCCTGCATGTAGGCGTTTGTTGCATCTTTCTGTTTATCTCC
TTGCACGTTTTTCCGTGCGGACCTCCGTCCTCCTCCATGCCTTCGACATC
GGCCATCTCGGTAATGCAGACCGACCATGACCCTTGCATATTTGTGGCAC
ACGCATACTGTACATGACTTTTTTTGGATTGTTTTGTCGACAGGCGATTC
TGGAGGAGCTGAAGCTGGTGCTGGAAGAAGATGCTGCGGTTTTCATGACC
AAGATGTGGCGCATGCTCGTTTTCTGCACGCTTCGAGCGGTGGAGAGGGC
ACAGTAGATCTATCATGGCGACATTATTTGATATACCCCGTATGAGGCAT
GATACTGTAGCACCTTTAATTTTTTTGTTGTTTTTGCTCGTGGGTAGGTA
GAGTTCACAGGGCAGTGCGGAGCGTAGCAAATGTGGCGGGGTGAAGGCTA
GGGTTTGCTTGACGTATGCATAGGTACGTCCGTGTTCGTCAGAAAAGAAA
AAAGGTGGCGCGAAGTATAATTACCGGTACGTGTGTGGATGCAGGGAGGC
GTGTGCTGGCAGAGAATCGACGCCGGTTTGTCGTGTAAGGTAAGCGAAGC
GAGGGGTGAGAATGAATGAGGATGAGTGGTGTTACGTCGTTTGAGCGTGG
AGACTCCTTTCGGCGTAATAAGTTGTTGGTTGTCTTGACATTGAAAGCAA
GGGTGACATGATGGACATAACCATTGGCGCTGCTAAAAGGAGCATGAAGC
ATGTAGTGGTGTTGGCCTTGCTGTGCTTCGTGTAGAGCAAACGCTGCTGC
GTCCCTTGTTCGATTTTTCTTGTTGTGGCGACACAAGTGATTAATGGTGG
TGTAACTTCAGAGGAACACGAGGCTTGTTGGTGGCGATTTTGTTTGCTGT
GGCCTGCCGTAGTTGCGTCTTTGTTTGTTTCGTCGTAAATGGAACAGACC
ATTGCCGCGTCCCATTTTAGGCGCCTGGCTACATGTAGTAAATAAGTCGG
AACTAATAAACCCAACCACGTTCACACAGCGGC back to topCoding sequence (CDS) from alignment at P-lacustris_contig12:188912..203794- >mRNA_P-lacustris_contig12.1500.1 ID=mRNA_P-lacustris_contig12.1500.1|Name=mRNA_P-lacustris_contig12.1500.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=4788bp|location=Sequence derived from alignment at P-lacustris_contig12:188912..203794- (Pleurocladia lacustris SAG_25_93) ATGGGGCATGGGACCCGATGGGGCATGGGACCCGGTATGGGCCCAGGCAT GGGCGGGCCCGGCATGGGCGGGCCGGGCATGGGCGGACCCGGCATGGGCG GACCCGGCATGGGCGGGCCGGGAATGGGCGGTATGGGCCCAGGCATGGGC GGGCCCGGCATGGGCGGGCCGGGCATGGGCGGACCCGGCATGGGCGGACC CGGCATGGGCGGGCCGGGAATGGGCGGGGAATGGGGGCCAGGCATGTCCA TGGGCGGGAGGGGTGTGAACCAAGGGGAATGGGGGCCAGGCATGTCCATG GGCGGGAGGGGTGTGAACCAAGGCATGGGCGGCCGAGGTCCCGGCTTGGC AGGGGGTGTTCGCCCCCCCCTCCGCGCCTCCCCCCCAATCTTCCGGCTCT CCAGGGCATGGGAAACCATCCGGGCGGCGGCGGCGGACCTGACAACAGAA TGGGGCGTGGTGGTATGAACGGACCCAACGGCAATATGGGCGGGGGTACG ACAAACGGCGGTCCCGCATCGGCTCACTCGGCGGGAGGAAGAGCCGGCGG CGGCGGCGGCGACGGCGGCGGCGGGCCAAGCATCAACGTATACGTCGGCA AGCTGAAGGCCGAGGCCGACAACACGCTGGTGCAGGAACTGCTCATGTGT TGCGGGAGGGTAGAAAAGTGGAACCGGGCGGTAGATCCGTCGACGGACCT GCCCAAGGCGTTCGGGTTTTGCACGTACTACAACGCGCAGGCCGCGGCAG TCGCGGTGCAGGCATGGGCGGCCGAGGTCCCGGCTTGGCAGGGGGTGTTC GCCCCCCCCTCCGCGCCTCCCCCCCAATCTTCCGGCTCTCCAGGGCATGG GAAACCATCCGGGCGGCGGCGGCGGACCTGACAACAGAATGGGGCGTGGT GGTATGAACGGACCCAACGGCAATATGGGCGGGGGTACGACAAACGGCGG TCCCGCATCGGCTCACTCGGCGGGAGGAAGAGCCGGCGGCGGCGGCGGCG ACGGCGGCGGCGGGCCAAGCATCAACGTATACGTCGGCAAGCTGAAGGCC GAGGCCGACAACACGCTGGTGCAGGAACTGCTCATGTGTTGCGGGAGGGT AGAAAAGTGGAACCGGGCGGTAGATCCGTCGACGGACCTGCCCAAGGCGT TCGGGTTTTGCACGTACTACAACGCGCAGGCCGCGGCAGTCGCGGTGCAG CTCCTAAACGACCTGGAGTTGGCCGGCCAGGCTATTCTGGTCAAGGTCGG GAAGAAGGAGCAGCCATCCCTGGAGGCGTTCTTGGAACCGAAGGATGAGA AGTACTCCAAGAAACACAAGGTTCTTCTCGACGCGGTCAAGGCGAAGCTC CTAAACGACCTGGAGTTGGCCGGCCAGGCTATTCTGGTCAAGGTCGGGAA GAAGGAGCAGCCATCCCTGGAGGCGTTCTTGGAACCGAAGGATGAGAAGT ACTCCAAGAAACACAAGGTTCTTCTCGACGCGGTCAAGGCGAAGATCGAC TCTGTTCTCGTGAAGTACGGCGAGCGCAGTGCCCCCGACAAGGGCGCATC CAAGGACGGCGACGCCAATTCCGCCGGAGGGAAATCTCCCGTTTCAGTCG GCGCCAGCAGCCCTCCGCGCTCAAGCGACGGCGGCGGCGGCAGCGGCGCC TCCAAGGCTGGGAGGGGGGACGGCGGCTCCGGGTATCAGCAACAAGGCGC CGTCGGGAGGAAGCCGAAGAGCTGGGTGAGGTTCGACGGGGCGGCGATGC TCCTCAGCAGTGCGGGTTGGAGCGACGACGAAGACGAGGAGAAAGAGGAG CTCATCACAAGCGAGATCGAGAAGTTCAGGCAGAAGCAGATCGACTCTGT TCTCGTGAAGTACGGCGAGCGCAGTGCCCCCGACAAGGGCGCATCCAAGG ACGGCGACGCCAATTCCGCCGGAGGGAAATCTCCCGTTTCAGTCGGCGCC AGCAGCCCTCCGCGCTCAAGCGACGGCGGCGGCGGCAGCGGCGCCTCCAA GGCTGGGAGGGGGGACGGCGGCTCCGGGTATCAGCAACAAGGCGCCGTCG GGAGGAAGCCGAAGAGCTGGGTGAGGTTCGACGGGGCGGCGATGCTCCTC AGCAGTGCGGGTTGGAGCGACGACGAAGACGAGGAGAAAGAGGAGCTCAT CACAAGCGAGATCGAGAAGTTCAGGCAGAAGCAGGCGGAGAGGGACAAGA AGCTGGAGGACGAGCGGCGGCAGGAGCTGCAGCGCAAGATCAAGGACGCG CAGAGACGGGAGAAGCAGAAGGAGGAGGACGCCAAGAGGAGGGAGCAAGC TTCCCGGGCGGAGAGGGACAAGAAGCTGGAGGACGAGCGGCGGCAGGAGC TGCAGCGCAAGATCAAGGACGCGCAGAGACGGGAGAAGCAGAAGGAGGAG GACGCCAAGAGGAGGGAGCAAGCTTCCCGGGACCGAGAGGCGCGGGAGAT GGTCGCGATGGCCCTGATGAAAAGCCGCGACGACAAAGACGCGGCGGAGG ACCTAAAGAAGAGCGGTAGCGACGGGAATAACGCTACCAAAGCGTCCTCG TCCTCAGACAACAATCGGGACAGGGACGGCAGGGGACAGGACCGACGCAG GTCTAGATCCCGCTCTCGCTCTCGTTCTCGGTCTCGCTCCCGCTCGAGGG AGCGCAAGCGAGGACGGCGGGAACGTTCCCCGGACCGGGACGGCAGCAGG AACCGTTCCCCGGATCGGCACCGAGGAGACCGCGATAGCAGGCGCGACGA CCACCGCGATAGCGATAGGGGCGGCAGCCGCAGTAGCGGCGGCGGGGACA AGGACAAGAACGGTGCGGGCGGGGGGAGCGGCGGCGGCAGCAGTGAGAAG GAGAAGGGGATAGAAGCCAAGCGAGCTGCGCGGGCGAAGCTCGCGGAAGA GGAACGGCGCAAGCGGGGCCTCGCAGTCCTGTCGGCGCTGGAGAACGCCG GCAATGACAGAGATGACAGCGACGGCGGCGGCAATGGCGGGGCGGCGGGG AACGGGACGGCTCTGAGCACCGAGGACGACAAGCAGAGAAAGGAGGAGCT TCGGAGGCGCAAGGCCGTTCTCGCAGCCCTCGGTGACGGCATGCTGGACT CCGATGACGACGACGGTGACGAGGAGGAGGAAGAGGAGGAGGAGGAGGAA GAGGAGAAGAAGCCGACGGTATCACCGGGTTCACTGGGGGCGGCAGCGAC GCGCGTAGAAGACGGACCGAGAGGCGCGGGAGATGGTCGCGATGGCCCTG ATGAAAAGCCGCGACGACAAAGACGCGGCGGAGGACCTAAAGAAGAGCGG TAGCGACGGGAATAACGCTACCAAAGCGTCCTCGTCCTCAGACAACAATC GGGACAGGGACGGCAGGGGACAGGACCGACGCAGGTCTAGATCCCGCTCT CGCTCTCGTTCTCGGTCTCGCTCCCGCTCGAGGGAGCGCAAGCGAGGACG GCGGGAACGTTCCCCGGACCGGGACGGCAGCAGGAACCGTTCCCCGGATC GGCACCGAGGAGACCGCGATAGCAGGCGCGACGACCACCGCGATAGCGAT AGGGGCGGCAGCCGCAGTAGCGGCGGCGGGGACAAGGACAAGAACGGTGC GGGCGGGGGGAGCGGCGGCGGCAGCAGTGAGAAGGAGAAGGGGATAGAAG CCAAGCGAGCTGCGCGGGCGAAGCTCGCGGAAGAGGAACGGCGCAAGCGG GGCCTCGCAGTCCTGTCGGCGCTGGAGAACGCCGGCAATGACAGAGATGA CAGCGACGGCGGCGGCAATGGCGGGGCGGCGGGGAACGGGACGGCTCTGA GCACCGAGGACGACAAGCAGAGAAAGGAGGAGCTTCGGAGGCGCAAGGCC GTTCTCGCAGCCCTCGGTGACGGCATGCTGGACTCCGATGACGACGACGG TGACGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGAAGAAGCCGA CGGTATCACCGGGTTCACTGGGGGCGGCAGCGACGCGCGTAGAAGACGGA ACCGCCGAAGACAGCAAGGATGTGTCCGAGAGCAAAGTGGCCGCAGTCGT GGAGAAGAAGGGCAAGGCGAGGGATAAAGAGCTGGTCGGCAGCATCCCCA AGGAACCGCCGAAGACAGCAAGGATGTGTCCGAGAGCAAAGTGGCCGCAG TCGTGGAGAAGAAGGGCAAGGCGAGGGATAAAGAGCTGGTCGGCAGCATC CCCAAGGATCGCGAGGAGCTTTTCGCGTACGAAATCAACTGGCAGATGGT GGAAACCCACAACATCATCCAGTCCAAGATGCGGCCGTGGATCGTCAAGA AGATAATCGAGTACCTCGGGGAGGAAGAGAAGACACTCACGGAGTTCATC ATCACCAAGCTGGGCCAGCGCACCCCTCCGCAGGATCGCGAGGAGCTTTT CGCGTACGAAATCAACTGGCAGATGGTGGAAACCCACAACATCATCCAGT CCAAGATGCGGCCGTGGATCGTCAAGAAGATAATCGAGTACCTCGGGGAG GAAGAGAAGACACTCACGGAGTTCATCATCACCAAGCTGGGCCAGCGCAC CCCTCCGCAGGCGATTCTGGAGGAGCTGAAGCTGGTGCTGGAAGAAGATG CTGCGGTTTTCATGACCAAGATGTGGCGCATGCTCGTTTTCTGCACGCTT CGAGCGGTGGAGAGGGCACAGTAGGCGATTCTGGAGGAGCTGAAGCTGGT GCTGGAAGAAGATGCTGCGGTTTTCATGACCAAGATGTGGCGCATGCTCG TTTTCTGCACGCTTCGAGCGGTGGAGAGGGCACAGTAG back to top
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