mRNA_P-lacustris_contig12.1492.1 (mRNA) Pleurocladia lacustris SAG_25_93
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig12.1492.1 vs. uniprot
Match: A0A6H5L2L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L8_9PHAE) HSP 1 Score: 505 bits (1300), Expect = 1.580e-166 Identity = 271/405 (66.91%), Postives = 299/405 (73.83%), Query Frame = 2
Query: 200 GRGWRQPCQDIRL*GASQPREFVVSPRAVALDPRRHRRQGGPRFPGHPGL*GVAFSSMAKEGALRSACAVSGASTAKEED---------VVMLGFDTAESPATRGGGGLMPLTIDPGGDCVPTELEKKRAKLEKYRYECSEVSKSFLYVSGEDAAKQQGLVGSKGITHIINCAGPQCPNYLEYTGRFNFLRLDFYDHRTEDCAWFLYQAFDFMKTAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYNEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSPLLYRTAFHVPLFPNDLVLKICLHEEDRTYVRATLAALDSRACYVLVVPVKGNAEAGGVSSSSRSV---------APAPSSTRQLRAVGFAKSAASIRTPKASSNGKRSGSFESPMPP 1360
G W +P + + + RE +VSP AV PG + +M KEG LR ACAVSGA+ ++++ ESPA G LMPLTI+PGGDCVPTELEKKRAKLEKY+YECSEVS SFLYVSGEDAAKQQGLV SKGITHIINCAGPQCPNYLEYTGRFNFLRL+FYDHRTEDCAWF+YQAFDFMK AEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDY+EAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSPLLYRTA+HVPLFPNDLVLKIC+HE DRT V+ATLAALDSR CY+LVVP + ++ S V AP+ SSTRQ+R GFA + RTPKA N KR SFESP+PP
Sbjct: 33 GSSWSRPGLSLSIPADTGGREALVSP-AV------------------PGSRRASMHTMPKEGVLRGACAVSGAAVTRQDENAXXXXXXXXXXXXXXXXESPAPPRG--LMPLTIEPGGDCVPTELEKKRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSPLLYRTAWHVPLFPNDLVLKICIHESDRTNVKATLAALDSRGCYLLVVPATAGSAGRAKATGSMGVIPSRVRGGFAPSCSSTRQIRTGGFALPSPPSRTPKA--NNKRGSSFESPLPP 414
BLAST of mRNA_P-lacustris_contig12.1492.1 vs. uniprot
Match: D7FJS7_ECTSI (MAP kinase phosphatase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS7_ECTSI) HSP 1 Score: 451 bits (1160), Expect = 4.030e-154 Identity = 212/227 (93.39%), Postives = 221/227 (97.36%), Query Frame = 2
Query: 500 MPLTIDPGGDCVPTELEKKRAKLEKYRYECSEVSKSFLYVSGEDAAKQQGLVGSKGITHIINCAGPQCPNYLEYTGRFNFLRLDFYDHRTEDCAWFLYQAFDFMKTAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYNEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSPLLYRTAFHVPLFPNDLVLKICLHEEDRTYVRATLAALDSRACYVLVVP 1180
MPLTI+PGGDCVPTELEKKRAKLEKYRYECSEVS SFLYVSGEDAAKQQGLV SKGITHIINCAGPQCPNYLEYTGRFNFLRL+FYDHRTEDCAWF+Y+AFDFMK AEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDY+EAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSPLLYRTA+HVPLFPNDLVLKIC+HE DRT V+ATLAALDSR CY+LVVP
Sbjct: 1 MPLTIEPGGDCVPTELEKKRAKLEKYRYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYKAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSPLLYRTAWHVPLFPNDLVLKICIHESDRTNVKATLAALDSRGCYLLVVP 227
BLAST of mRNA_P-lacustris_contig12.1492.1 vs. uniprot
Match: A0A835YKW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW6_9STRA) HSP 1 Score: 180 bits (457), Expect = 9.050e-46 Identity = 112/325 (34.46%), Postives = 140/325 (43.08%), Query Frame = 2
Query: 512 IDPGGDCVPTELEKKRAKLEKYRYECSEVSKSFLYVSGEDAAKQQGLVGSKGITHIINCAGPQCPNYLEYTGR-------------FNFLRLDFYDHRTEDCAWFLYQAFDFMKTAEEQR---------------------------------------------------------------------------------GRVLVHCVQGVSRSCTLAIAWLMLTKGVDYNEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSPLLY----------RTAFHVPLFPNDLVLKICLHEEDRTYVRATLAALDSRACYVLV 1174
+D G + P E ++R++LE++R+ CSE+ FLYVSGE+ A + GITH+INCAGP CPNY E +LRLDFYD +ED AWFLY A DF+ +A +Q RVLVHC QGVSRSC LA AWLM + Y +AY VR R ICAPN GF C+LLEW+RR RTA+H PLFP D VLK+C R + + LD AC+V+V
Sbjct: 37 MDAGTEANPAE--ERRSRLEEFRFVCSEIVPGFLYVSGEEVACDGTALARVGITHVINCAGPHCPNYHETAAXXXXXXXXXXSAQSIKYLRLDFYDSASEDLAWFLYPALDFIDSAAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSNGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGARVLVHCAQGVSRSCALAAAWLMYAHNLSYRDAYASVRAARAICAPNAGFACALLEWERRXXXXXXXXXXXXXXXXXXXXLRTAYHSPLFPGDQVLKLCTDAATRAPLAPRVDLLDPAACFVVV 359
BLAST of mRNA_P-lacustris_contig12.1492.1 vs. uniprot
Match: A0A7S2V0L7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0L7_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.380e-45 Identity = 91/219 (41.55%), Postives = 123/219 (56.16%), Query Frame = 2
Query: 560 AKLEKYRYECSEVSKSFLYVSGEDAAKQQGLVGSKGITHIINCAGPQCPNYLEYTGR------------FNFLRLDFYDHRTEDCAWFLYQAFDFMKTAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYNEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSPLLYRTAFHVPLFPNDLVLKICLHEEDRTYVRATLAALDSRACYVLVVP 1180
AKL + CS V L+VSG+ A + L+ ITH++NCA CPNY E +L + +D + ED FLYQ+FDF+++ E GRVLVHCV+GVSRSCT+ IA++ML +GV + EAY VR R +C+PN FI +LL WQ+ R QP S P+ YR A H P+ L+ K+C T + LD R C++L P
Sbjct: 60 AKLAHFAEICSSVLPDLLFVSGKKVAANRKLLQENKITHVLNCARCHCPNYFEEKSSSANTTTQGEADGLRYLSFNLFDSKMEDITCFLYQSFDFIESCREAGGRVLVHCVEGVSRSCTVCIAYVMLHRGVKFPEAYEYVRHARNVCSPNAAFIAALLSWQKMRVQPVSHPMAYRVAPHGEHDPHTLLPKLCRKHNGLDPAVPTASILDPRTCFLLWRP 278
BLAST of mRNA_P-lacustris_contig12.1492.1 vs. uniprot
Match: A0A7S4DF41_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DF41_HETAK) HSP 1 Score: 152 bits (383), Expect = 4.510e-40 Identity = 75/158 (47.47%), Postives = 101/158 (63.92%), Query Frame = 2
Query: 542 ELEKKRAKLEKYRYECSEVSKSFLYVSGEDAAKQQGLVGSKGITHIINCAGPQCPNYLEYTGRFNFLRLDFYDHRTEDCAWFLYQAFDFMKTAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYNEAYLRVRQGRPICAPNTGFICSLLEWQRRR 1015
E +K AKL + CSEV + +LYV+G+ A + + GITHI+N + CPN+ E GRF +L +D R E+ WF+YQAFDF++ A RGR LVHCV+GVSRSC LA A+LM + + Y++A VR R + +PN GF C LLEWQ+ R
Sbjct: 20 EEARKSAKLRHFSVLCSEVLE-WLYVAGKAVAGNEEQLIDNGITHILNSSVTHCPNFFEAGGRFAYLGFRLHDSRDEEVVWFMYQAFDFIEGARRARGRCLVHCVEGVSRSCALAAAYLMWRQTLPYDQALQAVRAARGVASPNIGFACQLLEWQKLR 176
BLAST of mRNA_P-lacustris_contig12.1492.1 vs. uniprot
Match: A0A7J7Q0U8_9CHLO (MAP kinase phosphatase 1 n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q0U8_9CHLO) HSP 1 Score: 148 bits (374), Expect = 2.440e-37 Identity = 89/231 (38.53%), Postives = 122/231 (52.81%), Query Frame = 2
Query: 548 EKKRAKLEKYRYECSEVSKSFLYVSGEDAAKQQGLVGSKGITHIINCAGPQCPNYLEYTGRFNFLRLDFYDHRTEDCAWFLYQAFDFMKTAEEQRG--------------------RVLVHCVQGVSRSCTLAIAWLMLTKGVDYNEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSPLLYRTAFHVPLFPNDLVLKICLHEEDRTYVRATLAALDSRACYVLVVP 1180
E +R K KY +CS+V++ +YVSG A+ + ++ + GITH++NC G P Y + R + L D ED LY AFDFM+ A + RVLVHC QGVSRS ++ IA+LM G+ Y E Y VR R + +PN GF C L+ W +RRQQ P +YR A H P P LV K + ++ A +AALDSR C+V+ +P
Sbjct: 26 ELRRQKFAKYEMQCSQVAEG-VYVSGAAVAQDRAILAAHGITHVVNCVGALYPEYFK-DDRIAYKTLWLADTPHEDITCILYDAFDFMEEARKGSAXXXXXXXXXXXXXXXXXXXXRVLVHCSQGVSRSTSIVIAYLMWRTGLTYQEVYQAVRALRGVTSPNVGFTCQLINWAKRRQQQPDGARVYRIAPHCPDNPTYLVAKPVGPKPGCSH--ADVAALDSRGCFVVHLP 252
BLAST of mRNA_P-lacustris_contig12.1492.1 vs. uniprot
Match: A0A7J7Q184_9CHLO (Protein-tyrosine phosphatase-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q184_9CHLO) HSP 1 Score: 150 bits (379), Expect = 5.560e-36 Identity = 90/226 (39.82%), Postives = 122/226 (53.98%), Query Frame = 2
Query: 548 EKKRAKLEKYRYECSEVSKSFLYVSGEDAAKQQGLVGSKGITHIINCAGPQCPNYLEYTGRFNFLRLDFYDHRTEDCAWFLYQAFDFMKTAEE---------------QRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYNEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSPLLYRTAFHVPLFPNDLVLKICLHEEDRTYVRATLAALDSRACYVLVVP 1180
E +R K KY +CS+V++ +YVSG A+ + ++ + GITH++NC G P Y + R + L D ED LY AFDFM+ A + RVLVHC QGVSRS ++AIA+LM G Y E Y VR R + +PN GF C L+ W +RRQQ P +YR A H P P LV K + ++ A +AALDSR C+V+ +P
Sbjct: 97 ELRRQKFAKYEMQCSQVAEG-VYVSGAAVAQDRAILAAHGITHVVNCVGALYPEYFK-DDRIAYKTLWLADTPHEDITCILYDAFDFMEEARKGSTAXXXXXXXXXXXXXXRVLVHCSQGVSRSTSIAIAYLMWRTGGTYQEVYQAVRALRGVTSPNVGFTCQLINWAKRRQQQPDGARVYRIAPHCPDNPTYLVAKPVGPKPGCSH--ADVAALDSRGCFVVHLP 318
BLAST of mRNA_P-lacustris_contig12.1492.1 vs. uniprot
Match: A0A444ZTY0_ARAHY (Uncharacterized protein n=6 Tax=Arachis TaxID=3817 RepID=A0A444ZTY0_ARAHY) HSP 1 Score: 150 bits (379), Expect = 1.460e-35 Identity = 92/237 (38.82%), Postives = 124/237 (52.32%), Query Frame = 2
Query: 494 GLMPLTIDPGGDCV----PTELEKKRAKLEKYRYECSEVSKSFLYVSGEDAAKQQGLVGSKGITHIINCAGPQCPNYLEYTGRFNFLRLDFYDHRTEDCAWFLYQAFDFMKTAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYNEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSP----LLYRTAFHVPLFPNDLVLKICLHEEDRTYVRATLAALDSRACYVLVVP 1180
G+ PL P G +E + KR KL Y ECS +++ +Y+ + AK L+ GITH++NC G CP Y + + L L D TED LY FD+ + EQ GRVLVHC QGVSRS +L IA+LM +G + +A+ V+ R + PN GF C LL+ Q+R P+SP +YR A H P P LV KI H + ALDSR +++ VP
Sbjct: 84 GVWPLPETPRGSVSVVGSSSEFQLKREKLAFYDKECSRIAEH-VYLGSDTVAKNHDLLRQNGITHVLNCVGFVCPEYFKRDFVYKTLWLQ--DSPTEDITSILYDVFDYFEEVREQGGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKNARGVTNPNMGFACQLLQCQKRVHATPASPNSILRMYRMAPHSPYDPLHLVPKIVNHPSAQ--------ALDSRGAFIVHVP 309
BLAST of mRNA_P-lacustris_contig12.1492.1 vs. uniprot
Match: D8UBV1_VOLCA (MAP kinase phosphatase 1 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UBV1_VOLCA) HSP 1 Score: 142 bits (357), Expect = 6.600e-35 Identity = 83/221 (37.56%), Postives = 113/221 (51.13%), Query Frame = 2
Query: 518 PGGDCVPTELEKKRAKLEKYRYECSEVSKSFLYVSGEDAAKQQGLVGSKGITHIINCAGPQCPNYLEYTGRFNFLRLDFYDHRTEDCAWFLYQAFDFMKTAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYNEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQPPSSPLLYRTAFHVPLFPNDLVLKICLHEEDRTYVRATLAALDSRACYVLVVP 1180
P D P+E + +R K + CSEVS L++SG+ AK + + G+TH++NC G C Y + + L L D ED LY D++ +A GR+LVHC QGVSRS TL IA++M G Y+E + V+ R + PN GF C LL+WQ+R S +YR A H PN LV K+ + Y T LD R +VL P
Sbjct: 31 PVEDAAPSETQLRRQKYLFFEKHCSEVSAG-LFLSGDYVAKNRETLRQAGVTHVLNCVGFICKEYFKDELTYKTLYLQ--DTPAEDILCVLYDCLDYIDSALHSGGRILVHCSQGVSRSATLVIAYIMWRSGKPYDEVFAAVKAVRGVANPNIGFTCQLLQWQKRAASAKSRMRMYRIASHCVHAPNYLVPKLIT--PPKQYPNNTHRDLDPRGAFVLQTP 246
BLAST of mRNA_P-lacustris_contig12.1492.1 vs. uniprot
Match: A0A7R9V781_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V781_9CHLO) HSP 1 Score: 144 bits (364), Expect = 1.150e-34 Identity = 81/215 (37.67%), Postives = 121/215 (56.28%), Query Frame = 2
Query: 539 TELEKKRAKLEKYRYECSEVSKSFLYVSGEDAAKQQGLVGSKGITHIINCAGPQCPNYLEYTGRFNFLRLDFYDHRTEDCAWFLYQAFDFMKTAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYNEAYLRVRQGRPICAPNTGFICSLLEWQRRRQQP---PSSPL-LYRTAFHVPLFPNDLVLKICLHEEDRTYVRATLAALDSRACYVL 1171
+E +++RA+L + +CS V L+VSGE A+ + L+ GITH++NC G CP ++ + +D+ ED L++ +F+ +A G VLVHC QGVSRS TLAIA++M G +++A +V++ R I +PN GF C LL+WQ+RR P PSS L L R A H P P+ L+ + T AT LD R +++
Sbjct: 70 SETQQRRARLAFFERQCSRVLPQGLFVSGETVARDRQLLAGSGITHVLNCVGFTCPE--DFKEELTYKTFYLHDNPGEDLLSVLFEGLEFIDSALRAGGNVLVHCSQGVSRSATLAIAYIMWKFGRSFDQAMAQVKEARGIASPNIGFTCQLLQWQKRRSAPFAPPSSRLRLLRVAPHCPQTPSLLLARPVAPPPPSTSPHATWRQLDRRGAFLV 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig12.1492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig12.1492.1 >prot_P-lacustris_contig12.1492.1 ID=prot_P-lacustris_contig12.1492.1|Name=mRNA_P-lacustris_contig12.1492.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=372bp MAKEGALRSACAVSGASTAKEEDVVMLGFDTAESPATRGGGGLMPLTIDPback to top mRNA from alignment at P-lacustris_contig12:98596..105606+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig12.1492.1 ID=mRNA_P-lacustris_contig12.1492.1|Name=mRNA_P-lacustris_contig12.1492.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=7011bp|location=Sequence derived from alignment at P-lacustris_contig12:98596..105606+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig12:98596..105606+ >mRNA_P-lacustris_contig12.1492.1 ID=mRNA_P-lacustris_contig12.1492.1|Name=mRNA_P-lacustris_contig12.1492.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2232bp|location=Sequence derived from alignment at P-lacustris_contig12:98596..105606+ (Pleurocladia lacustris SAG_25_93)back to top |