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Homology
BLAST of mRNA_P-lacustris_contig1184.1396.1 vs. uniprot
Match: D8LD00_ECTSI (Protein arginine methyltransferase NDUFAF7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD00_ECTSI) HSP 1 Score: 380 bits (976), Expect = 1.130e-120 Identity = 270/524 (51.53%), Postives = 302/524 (57.63%), Query Frame = 3
Query: 321 MPTRMTHENDDRPPLTGLAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGRDGDFITAPEISQTFGEIIGIWCVANWKEMGSPEKFGLVELGPGKGTLMADILRTASSFPGFRKALTLHMVETSDNLRALQVKALGATFAPTASYSASRGXXXXXXSKEVKGPRCSSRGWGGGVAHRDRAGAEGITHSLHSAGVFGCPSCAPVPIHRQRLEGEACRH*RPWCRRRKRGRVRGWGQQGES*IRGGGWRGGRGFTRGGGGKGARLQVRAFYRRDNGSTNLPHQAKEDTGRQDDHWRLGGK--------LLQPKRGSII-VVEEGPSGGEGRGSAGGF-------RREHIARQGGGRENRTRQRGRAVRGL--RRGPCPGGLAAVLQGAQRGAG-SVGPRRGRH------DRGRQLRLAETCRGRGR-------GARPHGPVGQGQFLMEMGIGTRLSALAEQPHVTEEQADAMLQGYVRLVDPSKMGARYKVLGISEDGQRPPPPGFMSEIDPTDHRK 1796
MPTRMTHE DDRPPLTGLAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGR GDFITAPEISQTFGE+IGIWCVA+WKEMGSPE+F LVELGPGKGTLM DILRT SSFP FRKAL+LHMVETSD+LRALQVKALGATFAPTASYSASRGXXXXXX G G V H + SL A F +P+H+ + W R V G G GGG K+D D + L K L +PK+ +V G GG+ ++ + G R + + V+G+ R GG V G G S+ +G D G A+ G R GARPHGPVGQGQFL EMGIG RL+ALAEQPHVT EQADAML+GYVRLVDP++MG RYKVLGISE+ Q PPPGFMSE+DP D RK
Sbjct: 1 MPTRMTHEKDDRPPLTGLAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGRGGDFITAPEISQTFGEMIGIWCVASWKEMGSPEEFRLVELGPGKGTLMVDILRTVSSFPDFRKALSLHMVETSDDLRALQVKALGATFAPTASYSASRGXXXXXXXXXXXXXPMLLPGGGEVVWHTNIEQVPKGQPSLFIAQEF----LDALPVHQFQYTENG------WRERLVDVNVPGAGGARVDGPEGGG-------------------XXXXXXXXXXXXXXXXSRKQDAKEDDFRFVLSAKETTAVQTFLTKPKKAQDAKMVIGGLRGGKPSXXXXXXXXXXXXTKKGPLGESVGDRLEVSGESILLVKGVAERIAQDRGGALFVDYGEAHALGDSLRCFKGHEEVPVLSDPGEADMTADVNFGLLRRVVAGVEGARPHGPVGQGQFLREMGIGARLTALAEQPHVTAEQADAMLEGYVRLVDPAQMGVRYKVLGISEERQEMPPPGFMSEVDP-DLRK 494
BLAST of mRNA_P-lacustris_contig1184.1396.1 vs. uniprot
Match: A0A836CMV2_9STRA (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMV2_9STRA) HSP 1 Score: 169 bits (427), Expect = 6.990e-42 Identity = 156/500 (31.20%), Postives = 207/500 (41.40%), Query Frame = 3
Query: 351 DRPPLTGLAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGRDGDFITAPEISQTFGEIIGIWCVANWKEMGSPEKFGLVELGPGKGTLMADILRTASSFPGFRKALT-LHMVETSDNLRALQVKALGATFAPTASYSASRGXXXXXXSKEVKGPRCSSRGWGGGVA---HRD-RAGAEGITHSLHSAGVFGCPSCAPVPIH-------RQRL-------EGEACRH*RPWCRRRKRGRVRGWGQQGES*IRGGGWRGGRGFTRGGGGKGARLQVRAFYRRDNGSTNLPHQAKEDTGRQDDHWRLGGKLLQPKRG------SIIVVEEGPSGGEGRGSAGGFRREHIARQGGGR----ENRTRQRGRAVRGLRRGPCPGGLAAVLQGAQRGAGSVGPRRGRHDRGRQLRLAETCRGRGRGARPHGPVGQGQFLMEMGIGTRLSALAEQPHVTEEQADAMLQGYVRLVDPSKMGARYKVLGISEDGQRPPPPGF 1763
D+PP T L +L I + GP+T+ +YM ALQHP YGYY ++ ++IGR GDF TAPE+SQ FGE++G+WCVA W+ GSP LVE GPG+GTLMAD+LR A++FP FR L +H++ETS LR +Q ALG G + V+ + + GGVA HR+ R+ G T L + +P+H R+RL +G RH A VRA P + + G QP ++ VV+E + IA GGG G VR R V A+ G + C GA HGPV QG FL MG R + L EQPH+T+ QA+A+ + RLVDP +MG +YKVL + PPGF
Sbjct: 35 DKPPPTRLTFDLAARIKMRGPITMADYMNQALQHPTYGYYTKEANQIGRAGDFTTAPEMSQLFGELLGVWCVATWRAAGSPPAPLLVEGGPGRGTLMADLLRAAAAFPDFRGGLAGVHLIETSPALRRVQAAALGV------------GAVSDNDDEGVQSGKAGAAY--GGVAVTWHRELRSVPAGYTLLLAQELLDA------LPVHQFEAGQWRERLVDVDESAQGHHLRHVLSTS--------------------------------------ATPAVRALLE-------PPGEGEXXXXXXXXXXXXXGVAPQPGDTIEVCPMALAVVQETA--------------KRIAEHGGGALFIDYGEDHPAGDTVRAFR------SHQEVHVLAEPGMADI-------TADVDFAALRRCADAVPGAVCHGPVPQGVFLQTMGAAERAAVLVEQPHITDAQAEAIFTSFERLVDPKQMGQKYKVLAVVSQAHPEVPPGF 442
BLAST of mRNA_P-lacustris_contig1184.1396.1 vs. uniprot
Match: A0A2S6UH03_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha3_Bin4 TaxID=2013070 RepID=A0A2S6UH03_9PROT) HSP 1 Score: 154 bits (390), Expect = 9.700e-38 Identity = 75/128 (58.59%), Postives = 94/128 (73.44%), Query Frame = 3
Query: 372 LAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGRDGDFITAPEISQTFGEIIGIWCVANWKEMGSPEKFGLVELGPGKGTLMADILRTASSFPGFRKALTLHMVETSDNLRALQVKALGA 755
LA L Q I NGP+TV EYM AL +P++GYYM + D +GR GDFITAPE+SQ FGE++G+WC W+ MG P+ LVELGPG+GTLMAD LR A PGF A+ LH+VETS LRA+Q +A+G+
Sbjct: 4 LAAHLRQRISENGPLTVAEYMAEALGNPEHGYYMHR-DPLGRAGDFITAPEVSQMFGELLGLWCADRWQAMGGPDPVNLVELGPGRGTLMADALRAAEGAPGFIDAVRLHLVETSPVLRAIQERAVGS 130
BLAST of mRNA_P-lacustris_contig1184.1396.1 vs. uniprot
Match: A0A4D7QF47_9HYPH (Class I SAM-dependent methyltransferase n=1 Tax=Phreatobacter sp. NMCR1094 TaxID=2570229 RepID=A0A4D7QF47_9HYPH) HSP 1 Score: 152 bits (384), Expect = 6.410e-37 Identity = 77/131 (58.78%), Postives = 94/131 (71.76%), Query Frame = 3
Query: 363 LTGLAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGRDGDFITAPEISQTFGEIIGIWCVANWKEMGSPEKFGLVELGPGKGTLMADILRTASSFPGFRKALTLHMVETSDNLRALQVKALGA 755
+T L EL +I +GP+ V YM AL HP++GYYM + D +G GDF+TAPEISQ FGE+IGIW + W+ MGSP LVELGPG+GTLMADILR+A S GFR AL +H+VETS L ALQ + LGA
Sbjct: 1 MTPLEAELRVLIATDGPIPVDRYMALALGHPRHGYYMTR-DPLGVGGDFVTAPEISQVFGELIGIWAASIWQRMGSPSPVRLVELGPGRGTLMADILRSAQSMAGFRAALDVHLVETSPLLAALQKERLGA 130
BLAST of mRNA_P-lacustris_contig1184.1396.1 vs. uniprot
Match: A0A424TRV8_9PROT (Class I SAM-dependent methyltransferase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A424TRV8_9PROT) HSP 1 Score: 152 bits (385), Expect = 8.640e-37 Identity = 77/134 (57.46%), Postives = 96/134 (71.64%), Query Frame = 3
Query: 366 TGLAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGRDGDFITAPEISQTFGEIIGIWCVANWKEMGSPEKFGLVELGPGKGTLMADILRTASSFPGFRKALTLHMVETSDNLRALQVKALGATFAP 767
T L + L+ I GP+TVPE+M ALQHP++GYY RQE +G GDF+TAPEISQ FGE+IG+W V W ++G P +F LVELGPGKGTLMAD LR AS+ PGF A+ L +VET+ LR Q + L A +AP
Sbjct: 25 TPLTELLKAQIRATGPLTVPEFMTLALQHPEHGYYRRQE-AVGAAGDFVTAPEISQVFGELIGLWLVQRWIDLGQPSRFLLVELGPGKGTLMADALRAASALPGFLPAMDLVLVETNQTLRKAQAEQLSA-YAP 156
BLAST of mRNA_P-lacustris_contig1184.1396.1 vs. uniprot
Match: A0A833G3N0_9HYPH (Class I SAM-dependent methyltransferase (Fragment) n=1 Tax=Bauldia sp. TaxID=2575872 RepID=A0A833G3N0_9HYPH) HSP 1 Score: 147 bits (372), Expect = 1.010e-36 Identity = 76/137 (55.47%), Postives = 92/137 (67.15%), Query Frame = 3
Query: 363 LTGLAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGRDGDFITAPEISQTFGEIIGIWCVANWKEMGSPEKFGLVELGPGKGTLMADILRTASSFPGFRKALTLHMVETSDNLRALQVKALGATFAPTA 773
+T L ++L I GPMTV EYM L P GYYMR+E GRDGDFITAP++SQ FGE+IG+W VA W MG+P F L ELGPG+GTLMAD+LR A+ PGF A +H+VETS LR +Q + L A P A
Sbjct: 1 MTPLGEKLIARIRAAGPMTVAEYMAACLGDPADGYYMRREP-FGRDGDFITAPDVSQMFGELIGLWAVATWTAMGAPSPFVLAELGPGRGTLMADLLRAATVRPGFLDAAEVHLVETSPRLREVQAETLAAAGLPIA 136
BLAST of mRNA_P-lacustris_contig1184.1396.1 vs. uniprot
Match: A0A2E1V1K5_9PROT (SAM-dependent methyltransferase n=1 Tax=Geminicoccus sp. TaxID=2024832 RepID=A0A2E1V1K5_9PROT) HSP 1 Score: 152 bits (383), Expect = 1.070e-36 Identity = 77/137 (56.20%), Postives = 96/137 (70.07%), Query Frame = 3
Query: 357 PPLTGLAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGRDGDFITAPEISQTFGEIIGIWCVANWKEMGSPEKFGLVELGPGKGTLMADILRTASSFPGFRKALTLHMVETSDNLRALQVKALGATFAP 767
P T L L I GP+TV E+M ALQHP++GYY RQE +G DF+TAPEISQ FGE+IG+W V W ++G PE+F LVELGPGKGTLMAD LR AS+ PGF A+ L ++ET++ LRA Q + L A +AP
Sbjct: 3 PSSTPLTALLTAQIRATGPLTVAEFMTLALQHPEHGYYRRQE-AVGAAADFVTAPEISQVFGELIGLWLVQRWLDLGQPERFLLVELGPGKGTLMADALRAASALPGFLAAMDLVLIETNETLRAAQAEKLSA-YAP 137
BLAST of mRNA_P-lacustris_contig1184.1396.1 vs. uniprot
Match: A0A397AMM1_9STRA (Protein arginine methyltransferase NDUFAF7 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AMM1_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.510e-36 Identity = 72/136 (52.94%), Postives = 93/136 (68.38%), Query Frame = 3
Query: 372 LAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGRDGDFITAPEISQTFGEIIGIWCVANWKEMGSPEKFGLVELGPGKGTLMADILRTASSFPGFRKALTLHMVETSDNLRALQVKALGATFAPTASY 779
L + L +I + GP+TV E+M +AL HP +GYYM++ D G GDF TAPEISQ FGE+IG+WCVA W++MGSP +VE+GPG+G+LM D +RTA FP F KAL +H+VE S LR LQ L A S+
Sbjct: 74 LTRFLHSLIAVRGPITVAEFMRHALSHPVHGYYMKR-DVFGTKGDFTTAPEISQMFGELIGVWCVATWQQMGSPSHVKVVEVGPGRGSLMEDFVRTAKQFPAFYKALEIHLVEISPALRELQQTKLLAVKTSADSF 208
BLAST of mRNA_P-lacustris_contig1184.1396.1 vs. uniprot
Match: A0A351T4B1_9PROT (Methyltransferase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T4B1_9PROT) HSP 1 Score: 151 bits (381), Expect = 1.900e-36 Identity = 73/129 (56.59%), Postives = 94/129 (72.87%), Query Frame = 3
Query: 363 LTGLAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGRDGDFITAPEISQTFGEIIGIWCVANWKEMGSPEKFGLVELGPGKGTLMADILRTASSFPGFRKALTLHMVETSDNLRALQVKAL 749
+ L + +I +GP+T+ YM AL HP++GYYMR+ D G GDFITAPEISQ FGE+IG+WCV +W +MG+P+ F LVELGPG+GTLMADILR A+ P F A +H+VETS LRA+Q +AL
Sbjct: 1 MNALRDHIAAVIAADGPLTIGGYMSLALGHPEFGYYMRR-DPFGVSGDFITAPEISQIFGELIGLWCVQSWLDMGAPDSFALVELGPGRGTLMADILRAAALRPAFCAAAQIHLVETSPALRAVQQQAL 128
BLAST of mRNA_P-lacustris_contig1184.1396.1 vs. uniprot
Match: UPI0019A31F4F (SAM-dependent methyltransferase n=1 Tax=Azorhizobium oxalatiphilum TaxID=980631 RepID=UPI0019A31F4F) HSP 1 Score: 150 bits (379), Expect = 3.690e-36 Identity = 77/133 (57.89%), Postives = 94/133 (70.68%), Query Frame = 3
Query: 372 LAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGRDGDFITAPEISQTFGEIIGIWCVANWKEMGSPEKFGLVELGPGKGTLMADILRTASSFPGFRKALTLHMVETSDNLRALQVKALGATFAPT 770
L EL+ +I GP++V YM AL HPK+GYY+ + D +G GDF TAPEISQ FGE+IG+W VA W++MG+PE F LVELGPG+GTLMAD LR A P F A++LHMVE S LRA Q L A +APT
Sbjct: 5 LEAELKALIAAEGPISVGRYMALALGHPKHGYYVTR-DPLGAKGDFTTAPEISQMFGELIGLWAVATWQQMGAPEAFRLVELGPGRGTLMADALRAAKLLPAFGAAMSLHMVEMSPVLRAKQADNLSA-YAPT 135
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 305.4 |
| Seed ortholog evalue | 3e-80 |
| Seed eggNOG ortholog | 2880.D8LD00 |
| KEGG ko | ko:K18164 |
| KEGG Pathway | ko04714,map04714 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005975,GO:0005976,GO:0005977,GO:0006073,GO:0006082,GO:0006091,GO:0006112,GO:0006139,GO:0006163,GO:0006520,GO:0006536,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0009064,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009628,GO:0009653,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010257,GO:0010506,GO:0010507,GO:0010638,GO:0010821,GO:0010822,GO:0015980,GO:0016043,GO:0016192,GO:0017144,GO:0019222,GO:0019637,GO:0019693,GO:0019752,GO:0022603,GO:0022607,GO:0030154,GO:0030435,GO:0030587,GO:0031154,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0032502,GO:0032981,GO:0033043,GO:0033108,GO:0034622,GO:0034641,GO:0040011,GO:0042330,GO:0042331,GO:0043052,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043933,GO:0043934,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046034,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055086,GO:0055114,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0072521,GO:0090140,GO:0090141,GO:0090702,GO:0098657,GO:0099120,GO:1901135,GO:1901360,GO:1901564,GO:1901605 |
| EggNOG free text desc. | protein-arginine omega-N symmetric methyltransferase activity |
| EggNOG OGs | COG1565@1,KOG2901@2759 |
| Ec32 ortholog description | Putative S-adenosyl-L-methionine-dependent methyltransferase MidA |
| Ec32 ortholog | Ec-01_001720.1 |
| COG Functional cat. | H |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03029 |
| Exons | 8 |
| Model size | 2262 |
| Cds size | 951 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815498.244578-UTR-P-lacustris_contig1184:11426..11473 | 1622815498.244578-UTR-P-lacustris_contig1184:11426..11473 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 11427..11473 + |
| 1693493574.6290185-UTR-P-lacustris_contig1184:11426..11473 | 1693493574.6290185-UTR-P-lacustris_contig1184:11426..11473 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 11427..11473 + |
| 1622815498.3069694-UTR-P-lacustris_contig1184:14311..14449 | 1622815498.3069694-UTR-P-lacustris_contig1184:14311..14449 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 14312..14449 + |
| 1693493574.6862729-UTR-P-lacustris_contig1184:14311..14449 | 1693493574.6862729-UTR-P-lacustris_contig1184:14311..14449 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 14312..14449 + |
| 1622815498.3187976-UTR-P-lacustris_contig1184:14897..15137 | 1622815498.3187976-UTR-P-lacustris_contig1184:14897..15137 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 14898..15137 + |
| 1693493574.6971602-UTR-P-lacustris_contig1184:14897..15137 | 1693493574.6971602-UTR-P-lacustris_contig1184:14897..15137 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 14898..15137 + |
| 1622815498.3310406-UTR-P-lacustris_contig1184:16184..16263 | 1622815498.3310406-UTR-P-lacustris_contig1184:16184..16263 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 16185..16263 + |
| 1693493574.711072-UTR-P-lacustris_contig1184:16184..16263 | 1693493574.711072-UTR-P-lacustris_contig1184:16184..16263 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 16185..16263 + |
| 1622815498.347731-UTR-P-lacustris_contig1184:16696..16890 | 1622815498.347731-UTR-P-lacustris_contig1184:16696..16890 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 16697..16890 + |
| 1693493574.73512-UTR-P-lacustris_contig1184:16696..16890 | 1693493574.73512-UTR-P-lacustris_contig1184:16696..16890 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 16697..16890 + |
| 1622815498.358822-UTR-P-lacustris_contig1184:17801..18414 | 1622815498.358822-UTR-P-lacustris_contig1184:17801..18414 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 17802..18414 + |
| 1693493574.750653-UTR-P-lacustris_contig1184:17801..18414 | 1693493574.750653-UTR-P-lacustris_contig1184:17801..18414 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1184 17802..18414 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815498.2593923-CDS-P-lacustris_contig1184:11473..11959 | 1622815498.2593923-CDS-P-lacustris_contig1184:11473..11959 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1184 11474..11959 + |
| 1693493574.647827-CDS-P-lacustris_contig1184:11473..11959 | 1693493574.647827-CDS-P-lacustris_contig1184:11473..11959 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1184 11474..11959 + |
| 1622815498.2727497-CDS-P-lacustris_contig1184:12976..13110 | 1622815498.2727497-CDS-P-lacustris_contig1184:12976..13110 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1184 12977..13110 + |
| 1693493574.6603858-CDS-P-lacustris_contig1184:12976..13110 | 1693493574.6603858-CDS-P-lacustris_contig1184:12976..13110 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1184 12977..13110 + |
| 1622815498.2829642-CDS-P-lacustris_contig1184:13637..13855 | 1622815498.2829642-CDS-P-lacustris_contig1184:13637..13855 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1184 13638..13855 + |
| 1693493574.6684864-CDS-P-lacustris_contig1184:13637..13855 | 1693493574.6684864-CDS-P-lacustris_contig1184:13637..13855 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1184 13638..13855 + |
| 1622815498.2949507-CDS-P-lacustris_contig1184:14198..14311 | 1622815498.2949507-CDS-P-lacustris_contig1184:14198..14311 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1184 14199..14311 + |
| 1693493574.67714-CDS-P-lacustris_contig1184:14198..14311 | 1693493574.67714-CDS-P-lacustris_contig1184:14198..14311 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1184 14199..14311 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1184.1396.1 >prot_P-lacustris_contig1184.1396.1 ID=prot_P-lacustris_contig1184.1396.1|Name=mRNA_P-lacustris_contig1184.1396.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=317bp
MLATAIRLGGGCQNLNCVTRRVASELLGNPLRAVASTSAVSNGSRRCLSS SDREREIAAELSRATTPPPPPLGSPRLQRTATEILINRSGLMPTRMTHEN DDRPPLTGLAKELEQMIVLNGPMTVPEYMIYALQHPKYGYYMRQEDKIGR DGDFITAPEISQTFGEIIGIWCVANWKEMGSPEKFGLVELGPGKGTLMAD ILRTASSFPGFRKALTLHMVETSDNLRALQVKALGATFAPTASYSASRGG GGGGGSKEVKGPRCSSRGWGGGVAHRDRAGAEGITHSLHSAGVFGCPSCA PVPIHRQRLEGEACRH* back to topmRNA from alignment at P-lacustris_contig1184:11427..18414+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig1184.1396.1 ID=mRNA_P-lacustris_contig1184.1396.1|Name=mRNA_P-lacustris_contig1184.1396.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=6988bp|location=Sequence derived from alignment at P-lacustris_contig1184:11427..18414+ (Pleurocladia lacustris SAG_25_93) AGGCTCTGCGGCCTGCCTGCAGCTGGCAACACAAACAAGCGAGCATCATG
CTCGCCACAGCAATACGCCTTGGGGGAGGCTGTCAGAATCTGAACTGCGT
GACCCGAAGAGTAGCCAGTGAGCTACTCGGGAACCCTTTGCGTGCCGTAG
CCTCCACTTCCGCTGTCAGCAATGGCAGCCGAAGGTGTCTGTCTTCATCT
GATCGCGAGAGGGAGATAGCAGCTGAGCTCTCCAGAGCAACGACACCACC
ACCGCCACCGCTGGGTAGCCCTCGGCTGCAACGCACAGCCACCGAGATAC
TCATCAATCGATCGGGGTTGATGCCCACGCGCATGACTCACGAGAACGAC
GACAGGCCACCGCTGACGGGACTGGCGAAAGAGCTGGAACAAATGATCGT
CCTGAACGGACCGATGACGGTGCCCGAGTACATGATCTACGCTTTGCAAC
ACCCCAAGTACGGCTACTACATGCGGCAGGAGGACAAGATTGGCCGCGAC
GGGGACTTCATCACGGCACCGGAGATTAGTCAGGTCGGACAAGCTCATAC
GTATCTCTCGGTTGCAGAATAGCAGCAAAAAAAGAGAGCCTGAAATAGAG
TCAGCGCAAAAACCTATGTTGCCTACATGCTGCTGTTTCCCGCTAAACAC
ACCAACTGATGCCTATCACAGCAGTCAGTTGGCTAAGACATACATAAATA
CACAGACGAACATATACAGGCTTCGTCACGCTGCTGCTGTGCGCAGCTTC
GTGTCGTATGCGTGTCAGTCCTCTTCTTGAATCACATACACATCGAAATA
GTACATACTGCACCCGCAGCAAGCAACAAAAACCTTGCTGCTCTTCGGCG
TCGGGTACACGAGCGATACGAATGTGCTCAGTGTCGAAAGCATAGATATC
CACTGGAGGTCATCGCTGCTGACGCGACTGAAGCAATAGTGCAGCAGGCG
GTTGACGCTTGCGAAACCTCAACCGGTTCGCACGCTCCTTCCTCCCACCG
TCACGCACCACGGCGGCCGTGGGCAACATACTGCCTTAGTTACCGCTGCT
GTTCTTGCAACTACGTGCACCCAAACACTTTGTGGGGGCAGTAGTGAGCG
CCGACCATGCTTTCAAATGTGTGCATGGAATAGCACCCTCCGTTAAAGGA
TAGCAGGACCGCTGGATGTCCTATCCAAGCACAACTCGCAGAATGCGTGT
GTGCGTACTCCTATGTGTCATAAACTCCCTATGCGCGACATAACTCCAGG
CCACACTCAGATTGACTTCCTTCGACAATAGTTGACCCCTGTACCACCGT
CAGCATGTACGACCGTCAGCATCCCCTTCGTGCACTTGTCCCACGTCTTC
TCCGCGATGTGCATCATCACCAATCCCGCCCAGCGCCAACACCTAGCTGT
CCGCCGGCAATACAATCGGCTTTGGGAAACATTCGTCGATAACACTTTCG
TTAACCTGCTGTACCGCCTGTGATGCTCATAGAAATATGCCCAAGGATAC
AATGCTCACAGGAAGTTTGGCGGCAATTTATTGTTCTTTTTGGATGGCAG
ACATTCGGGGAGATAATCGGGATTTGGTGCGTGGCGAACTGGAAGGAGAT
GGGCTCGCCGGAGAAGTTCGGACTGGTGGAGCTAGGACCGGGTAAGGGCA
CCCTCATGGCCGACATCCTGAGGACGGCCAGCAGGTAAGGTTAAGCTTCA
CCAACATCGTGCACATGTACCAGACAGGAGCGGGGTTTGAAGCTAGTCCG
GCAACGGCGACGACAGATGTTTTAGCTACAGAGTAGCATCATGCCGCAGC
TCATGATTGGTCTGGCGCAGCATTTATTGCTCGCTAGTAGTGAACAACAA
CAGGAGACGAGGAGAGTAACTCAAGCATGATGTTTTAGTGGCTGGGCAGC
CGCAGATTGCCGGATGTCTCTTTTTTTTTTACCATCATAAGGCTGACAAG
CAAGCACCAACTCGCTAGCAGGTCGACATTTTCTTTTATCGAACCAAGGC
GCCTGTTAGTCTTTGCGGAGAAGCCCTTGGATTTTAGCAGGAATGTTGAT
GCGATTCTTCGTGAAAGCAACGGCATCACATTTTTCTTCTCTCACACCGT
CGGCCGGACGTGTAAGCCCTGACTCCGAAAGTGACGGCACACACACTCGT
TCCCGCACAGTGAATATGTAGCCTCCGTTCGCCTGGCCCCGCGCACTCCA
CCCACCGACAGTTTTCCAGGCTTTAGGAAGGCGCTGACGCTTCACATGGT
GGAAACCAGCGATAACCTCAGAGCCTTGCAGGTTAAGGCGTTGGGCGCAA
CGTTTGCCCCGACAGCTTCGTACTCGGCGTCCCGTGGAGGCGGGGGGGGC
GGCGGTTCGAAAGAAGTAAAGGGGCCCCGATGCAGCTCCCGGGGGTGGGG
AGGTGGTGTGGCACACCGCGATAGAGCAGGTGAGCGGGTGTAGGGTTGTT
GTCGTGACCGCGTACTCCGTGGGCCACCGGCATGGTGTTGACATGTCTTG
GTATTGGGAGAAGGGTTACCCGTGGTGATGTCGCGGTGGGGGGTGTGGCG
GATTTGTCACGAGTTTTTCGTTTCGAAGTGTAAGCACGTGGTGGGGTTAT
CTGGCGGCCTTTGTAGCAAGTGGTGTACCCCCACCCCCACCCCACCCGCC
CTTGTTTCACTCAGTGCTCGCGCACATGTTCGTGCATACTCGCCACAAAA
CACAAAACACAGCCCAATAACAACACGCCCACACATACCCCTTCCCACAA
AACTAAACATGAACGCCTTCAGGTGCCGAAGGGATTACCCACTCTCTTCA
TAGCGCAGGAGTTTTTGGATGCCCTTCCTGTGCACCAGTTCCAATACACA
GACAAAGGCTGGAGGGAGAGGCTTGTCGACATTAGCGTCCCTGGTGCCGG
AGGCGCAAGCGCGGACGGGTCCGAGGATGGGGACAGCAAGGGGAGAGTTA
AATCCGCGGCGGAGGGTGGCGGGGGGGGCGGGGATTCACAAGAGGAGGAG
GAGGAAAGGGAGCCCGACTTCAGGTGAACGAGAGCGAAGAAAAAGCAGGA
GGGAGAGTGGGAGCCAGAAGGACAGGCAGACGGTTAGACAGAGGAGGGCG
GAGAGAAAGAGAGGTAGAGAAAGGGTGTGAGCAAGGGCGAGGGGAGAGGG
AAAGAGCGAGGCGGGGATGGGGGAAGGGGCGTTTCAGTGGGACCTGGAGG
AACGACTAGTCTTGCGTCTACCTCGGGTTTCTTGTCGTCCCGTTTCCGCA
ATGGCCGTCGCGGTAGATTCGGAGGAGACCATACGGCCCGTTGCGTGAGG
CCCTGTTTTGTGTGCTCTCGCCACAGGGATGGTGCTGCCACTCGTGCCGC
CCATCGTACCAACTCGAAAGAAGCCATGCTCCGTTCTCACCACACCACGT
GACAACGTCGCCGTCGACTCCCTCCCGTAAACACACCCTGTACCCCCCTC
TCCATCTCATGTGCTTGCTAGGTTCGTGCTTTCTACCGAAGAGACAACGG
CAGTACAAACCTTCCTCACCAAGCCAAAGAAGACACAGGACGCCAAGATG
ATCATTGGAGGCTCGGGGGGAAGCTCCTCCAGCCGAAGAGGGGCAGCATC
ATCGTCGTCGAAGAAGGGCCCTCTGGGGGAGAGGGTCGGGGATCGGCTGG
AGGTTTCCGGAGAGAGCATATTGCTCGTCAAGGAGGTGGCCGAGAGAATC
GCACAAGACAGGTACGGTGGGGGGGCAGTAATGCGGCCCGGAGAAAGTAC
GGGGTCCCCGATGTAGTATATACTACGGTCAAAACGTTGTGGCGCATGGT
GGATGGTGACCAATGACAAAACCTGTTATGTTTCTCATTCCGAATAGAGC
CGGGTCCCGCAATAGTACACGTTCTCGCCACTTCAATCCGCACCATCGTG
GGACCCCTGCGTGGTAGACTCTTGAAGGGAGCGGGAAATCTATTAGCTTT
TGCGGATGACGGAGATCGCTTGAGAGAATCGCCGAGAAAAGGCCGGCAGC
CCGCACAGCCGCTGCTGGTGTGTACCGCTAGGGCGAAGACTCCAATTTTT
TTTTTCTTCATCCCATCTATCCTGGATGCGAGCCTGCTTTACACCTTCGG
CGTTATGAAGGGTGGCACCCAGCCGGGGCCACACATAAGAGTTCCTCTCC
TGAGGCCCCCATCCGCCCTCGTGGGTGACAATTTTTATTGCAAGAAGGGT
TCAGCTGTCCCTTTTCCCTCGTCGAAATCAATCCAAAACTCCTTGCTTTG
GAAAATTGCGGGGAAGATCGACGGTATTGCTGCCGTGCGACGCTGCCGGG
TCCAATTTCTTTGATGAACGAACGTTGTTCCCTCGAATGCGGAGTATTTC
GGAAAGCGTTTGAGGCGTTGATGAGAGCCGAGCTGTCAAGATTAGAACCA
TAGATGCCACGTCAGAACCAGAGATGCGCTATGTCCAATAGAGCGAAAGC
TGGAACGTGAGGACTGGACACGGTTCACCTTGCTTGGTCGCTCGGCCGTC
CGTTGCCGCCTAAGCATGGAGGTTTGGGGGCGACACATGGTTTTTCAACC
AGCGGCGATTCTCAGGTTGCCGTCCTCATGGGCATATGATTCTTTTAACC
CCAGTTTAAGGTGGGTTGCGTCTTTGTTTAAAATCGAACGGGGGTAAAAG
ACGTTCGCTCAAAAGGCCTCAACGGCTTTGACACAACGAACGATTCAGAA
GGATTCATCCCAACTTCGACGTCGTTCTCGCTCCTGCGTTGGACGCTTGT
GCTGACAGAGGGGGCGCGCTGTTCGTGGACTACGGAGAGGCCCATGCCCT
GGAGGACTCGCTGCGGTGCTTCAAGGGGCACAAAGAGGTGTGTTTTTTCC
GACGACGGCGTTTTGATTGCCTCTTAAGCTCCTCGCCGATCTAGTGATCT
TATTGGTCTACGATTCAAGCTGCTCTGTGTGTTGGGTACCACGCTTTAGT
CTCCCCTTTGGTTTGGGCTGGACTGCCCGTGTCTTCTGATGTCTCTGCCC
CGATGTTATTCCACCTCGTACTCCATGCTCTCTCTACTTAATGCTCTGTA
GGAGATACCGATGTTCTTCGACCACGTACTCCATGCTCTCTCTACTTAAT
GCCCTGTAGGAGATAAATGAAGAACGTGTCTTCGTTTTCGTTACACTACC
TTATCAAATTTGTCGTTAGTTTGCGAGCTTTGGTAATAAACCTGATTGGT
GCGCTATTGTGTGCCCCCTACCCCCCCGGCCCATCCTCCCGCCCCGCCAA
ACCTTCTCACCAATGTCCAGGTGCCGGTTCTGTTGGACCCCGGAGAGGCC
GACATGACCGCGGACGTCAACTTCGGCTTGCTGAGACGTGTCGTGGACGG
GGTAGAGGGGCGCGGCCGCACGGACCTGTCGGGCAGGGACAGTTCTTGAT
GGAGATGGGCATCGGGACCAGACTAAGCGCCTTGGCCGAGCAGCCACACG
TAACGGAGGAGCAGGTGAGGCATTTGCCCGGTGTGTTTGCTAGAAGTATG
TTTGGTCCTCCGGCTGAGTTTTGCGTTGATTGGCGGTGCCGACGGTGGCA
GCGCGGGGTGGGAGAAGGGGGGTAGAACAGCAGGACCTGTCCGAAGAGGA
GGTATGTTTTGTATGTGTGAGGCAGTGTTCTAGGTCCTCCTGATGTGTTG
TTCGCAAGGATTATCGCGAGAAGAACGTGGATGCTTGCTGGCCATCGGGA
TGCAGTGAAGGAGCAAGGCGAGGGTTGAACCATGTGTTGGCGATGGTTTC
ATGCGAGCGAGGAATGGGGGGTGGGGGGCGTGGATGGAATTGGCCACAGC
CGGTGAGATGTTCCCATGTTGAGTTTGCCGTGCTCTAGCGGAGTCGTACC
CTTGGCGAAGAAGCTCGTATCCAACGTGATGACTACTGTGTATGCCGCCT
GGATCCGATTAAATTAAAGGATTGAACCTTAGTGTTGTCGTTGATAGACT
GTCAATGTCAAGGTGATGGAGGGTGAGCGATGTGCTGTTGGCCGTCACGC
CGTACGTGCAAGGCAGTAAGTAGGGCATTCAGCGAACACGAGATCGTTGT
TATCGTGTTTTTTGTCATCTGCAGTCCTCGCAGTCTATCCCTCGGCGCAG
AAATCAACCGTCATTGCTGTGAAGACGTCCACATGAACCACCTACAGGGG
ACTTCCCAGATTACAGTTTTCCTTCCTGTGATATTTATTCTTTTCTATTA
TTTTCTTTTCTTTTTTCTAATTTTACTCTTTTTTTCTTTCTTTTTTTCTT
TCTTTTTTTCCAATTTTTTTCCAATTTTTTTTCTAATCCTTCTTCATCTT
CTTGCTTTCTTTGCGCTCCTCTCTCCCGGGCGTGTTTCCCCGTGCGCTTC
TCCGTCTGTGCGTTGTATATCTCAGGCGGACGCGATGCTACAAGGTTACG
TGCGTTTGGTGGACCCTTCGAAGATGGGCGCGCGGTACAAGGTGTTGGGC
ATTTCGGAAGACGGGCAAAGACCGCCTCCGCCGGGTTTCATGTCCGAGAT
CGATCCCACCGACCATCGCAAATTGTCGAAATAAAATTTAGAGGGAACGG
CTCGTCAGCCTTAAGGTGGAGCCTAGCTTCTTCCTTTGGGTCGGATCGTG
ATGCTGTGGTGGCTGATTTTAGCTTGGGAATGTTTCCTTGGTTAAGGTCG
AAAAATTTGGGCGTAAGCCCCAGACAAGAGGAAGGCAGGCCTTCAGGGAG
CTGAACAGGGAGCCGTATTCCACAACTATCTCTAAACACGACGAGGGCGT
GCTTTGACGCGGCGGGATGTGCACCCCGATGTGACATCAAATAAACAGCG
ACAGCAGTCACCGCCGACACGGGCTTCGTCGGCTGCACGATGCCGGAGAT
ACTGCTCCTTAGTTGAGGACAATAATTGTTCGGGCGGGTGGCGTGTACAT
TGACCCGGCCGTTTTGGGGCCACATCCCCGGGGGAGGAGGCTTGACGTGG
CGAGTGTGCCCACAAAGAAATGCATTCGAGAAGACGCC back to topCoding sequence (CDS) from alignment at P-lacustris_contig1184:11427..18414+ >mRNA_P-lacustris_contig1184.1396.1 ID=mRNA_P-lacustris_contig1184.1396.1|Name=mRNA_P-lacustris_contig1184.1396.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1902bp|location=Sequence derived from alignment at P-lacustris_contig1184:11427..18414+ (Pleurocladia lacustris SAG_25_93) ATGCTCGCCACAGCAATACGCCTTGGGGGAGGCTGTCAGAATCTGAACTG CGTGACCCGAAGAGTAGCCAGTGAGCTACTCGGGAACCCTTTGCGTGCCG TAGCCTCCACTTCCGCTGTCAGCAATGGCAGCCGAAGGTGTCTGTCTTCA TCTGATCGCGAGAGGGAGATAGCAGCTGAGCTCTCCAGAGCAACGACACC ACCACCGCCACCGCTGGGTAGCCCTCGGCTGCAACGCACAGCCACCGAGA TACTCATCAATCGATCGGGGTTGATGCCCACGCGCATGACTCACGAGAAC GACGACAGGCCACCGCTGACGGGACTGGCGAAAGAGCTGGAACAAATGAT CGTCCTGAACGGACCGATGACGGTGCCCGAGTACATGATCTACGCTTTGC AACACCCCAAGTACGGCTACTACATGCGGCAGGAGGACAAGATTGGCCGC GACGGGGACTTCATCACGGCACCGGAGATTAGTCAGATGCTCGCCACAGC AATACGCCTTGGGGGAGGCTGTCAGAATCTGAACTGCGTGACCCGAAGAG TAGCCAGTGAGCTACTCGGGAACCCTTTGCGTGCCGTAGCCTCCACTTCC GCTGTCAGCAATGGCAGCCGAAGGTGTCTGTCTTCATCTGATCGCGAGAG GGAGATAGCAGCTGAGCTCTCCAGAGCAACGACACCACCACCGCCACCGC TGGGTAGCCCTCGGCTGCAACGCACAGCCACCGAGATACTCATCAATCGA TCGGGGTTGATGCCCACGCGCATGACTCACGAGAACGACGACAGGCCACC GCTGACGGGACTGGCGAAAGAGCTGGAACAAATGATCGTCCTGAACGGAC CGATGACGGTGCCCGAGTACATGATCTACGCTTTGCAACACCCCAAGTAC GGCTACTACATGCGGCAGGAGGACAAGATTGGCCGCGACGGGGACTTCAT CACGGCACCGGAGATTAGTCAGACATTCGGGGAGATAATCGGGATTTGGT GCGTGGCGAACTGGAAGGAGATGGGCTCGCCGGAGAAGTTCGGACTGGTG GAGCTAGGACCGGGTAAGGGCACCCTCATGGCCGACATCCTGAGGACGGC CAGCAGACATTCGGGGAGATAATCGGGATTTGGTGCGTGGCGAACTGGAA GGAGATGGGCTCGCCGGAGAAGTTCGGACTGGTGGAGCTAGGACCGGGTA AGGGCACCCTCATGGCCGACATCCTGAGGACGGCCAGCAGTTTTCCAGGC TTTAGGAAGGCGCTGACGCTTCACATGGTGGAAACCAGCGATAACCTCAG AGCCTTGCAGGTTAAGGCGTTGGGCGCAACGTTTGCCCCGACAGCTTCGT ACTCGGCGTCCCGTGGAGGCGGGGGGGGCGGCGGTTCGAAAGAAGTAAAG GGGCCCCGATGCAGCTCCCGGGGGTGGGGAGGTGGTGTGGCACACCGCGA TAGAGCAGTTTTCCAGGCTTTAGGAAGGCGCTGACGCTTCACATGGTGGA AACCAGCGATAACCTCAGAGCCTTGCAGGTTAAGGCGTTGGGCGCAACGT TTGCCCCGACAGCTTCGTACTCGGCGTCCCGTGGAGGCGGGGGGGGCGGC GGTTCGAAAGAAGTAAAGGGGCCCCGATGCAGCTCCCGGGGGTGGGGAGG TGGTGTGGCACACCGCGATAGAGCAGGTGCCGAAGGGATTACCCACTCTC TTCATAGCGCAGGAGTTTTTGGATGCCCTTCCTGTGCACCAGTTCCAATA CACAGACAAAGGCTGGAGGGAGAGGCTTGTCGACATTAGGTGCCGAAGGG ATTACCCACTCTCTTCATAGCGCAGGAGTTTTTGGATGCCCTTCCTGTGC ACCAGTTCCAATACACAGACAAAGGCTGGAGGGAGAGGCTTGTCGACATT AG back to top
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