mRNA_P-lacustris_contig118.1374.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-lacustris_contig118.1374.1
Unique Name	mRNA_P-lacustris_contig118.1374.1
Type	mRNA
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)

Homology

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BLAST of mRNA_P-lacustris_contig118.1374.1 vs. uniprot
Match: D7G420_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G420_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 1.910e-44
Identity = 193/211 (91.47%), Postives = 199/211 (94.31%), Query Frame = 3

Query:  807 FQFQFRGTKQNVKRYPTVNTLGARTPMPLLGWLTRELDMNHYDMRCLILRHPRLMAYRVTSHVAPKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRSLDKRMLPRARQMRAKEIEPRFGPHKWVVSTYTDTQFTRWLEG 1439
            + F F    +  KRYPTVNTLG + PMPLLGWLTRELDMNH+DMRCLILRHPRLMAYRVTSHVAPKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRSLDKRMLPRA+QMR K+IEPRFGPHKWVVSTYTD QFTRWLEG
Sbjct:  185 YNFSFEELNKMSKRYPTVNTLGDKAPMPLLGWLTRELDMNHFDMRCLILRHPRLMAYRVTSHVAPKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRSLDKRMLPRAQQMREKDIEPRFGPHKWVVSTYTDKQFTRWLEG 395

[Close]

BLAST of mRNA_P-lacustris_contig118.1374.1 vs. uniprot
Match: A0A6H5KV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV04_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.410e-9
Identity = 82/232 (35.34%), Postives = 106/232 (45.69%), Query Frame = 1

Query:  355 PMSDVLALPQHRNEGE-----PTLTGRKRSQPTGGWDSSAGEGSDLTTR-------------------HISPSRVIVQGAAAAGAATAPVGGAGDRLETGKDLLSASGINTAVT-------DEIEHDVGESPVAFSVTAATKQDLG-----WSDSDTPAAS-VALP----PAAV------------------------------GTAASVDG----SADCSSCLGDFNFSFE 825
            P+S++ A  +H    +     PTL GRKRSQPTGGW SS+ +G+D                          PSR I+QGAAAA AA   VG  G   E G   L+A G ++  T       +E+E DVG++PVA+ + AAT Q L       + S+ PAA+ VA P    PA V                              G AA+ D     +AD  SCLGD+NFSFE
Sbjct:   55 PLSELPAGSEHLGPHDGVLPSPTLAGRKRSQPTGGW-SSSNDGNDQERATAGAASSSMCMRRNQNDHSEARPSRFIMQGAAAADAAAGVVGVKG---EVGDGFLAAGGGSSGTTSSGASRAEEMELDVGDTPVAY-LRAATSQQLRDDATRSTSSEVPAATFVAEPSTSGPAVVXXXXXXXXXXXXXXXXXXXXXXXXXXVFVPGVAATADADNGSAADPVSCLGDYNFSFE 281

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig118.1374.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig118.1374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G420_ECTSI	1.910e-44	91.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KV04_9PHAE	1.410e-9	35.34	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig118	contig	P-lacustris_contig118:185982..196367 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	141.7
Seed ortholog evalue	3.3e-31
Seed eggNOG ortholog	2880.D7G420
KEGG ko	ko:K15031,ko:K15032
Hectar predicted targeting category	other localisation
EggNOG free text desc.	termination of mitochondrial transcription
EggNOG OGs	KOG1267@1,KOG1267@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03012,ko03029
Exons	6
Model size	1441
Cds size	555
Stop	0
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815494.0631979-UTR-P-lacustris_contig118:185981..186806	1622815494.0631979-UTR-P-lacustris_contig118:185981..186806	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig118 185982..186806 +
1693493572.4873683-UTR-P-lacustris_contig118:185981..186806	1693493572.4873683-UTR-P-lacustris_contig118:185981..186806	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig118 185982..186806 +
1622815494.0784192-UTR-P-lacustris_contig118:191878..191937	1622815494.0784192-UTR-P-lacustris_contig118:191878..191937	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig118 191879..191937 +
1693493572.4979668-UTR-P-lacustris_contig118:191878..191937	1693493572.4979668-UTR-P-lacustris_contig118:191878..191937	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig118 191879..191937 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815494.090116-CDS-P-lacustris_contig118:191937..191997	1622815494.090116-CDS-P-lacustris_contig118:191937..191997	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig118 191938..191997 +
1693493572.5067337-CDS-P-lacustris_contig118:191937..191997	1693493572.5067337-CDS-P-lacustris_contig118:191937..191997	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig118 191938..191997 +
1622815494.1008828-CDS-P-lacustris_contig118:192559..192670	1622815494.1008828-CDS-P-lacustris_contig118:192559..192670	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig118 192560..192670 +
1693493572.5163183-CDS-P-lacustris_contig118:192559..192670	1693493572.5163183-CDS-P-lacustris_contig118:192559..192670	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig118 192560..192670 +
1622815494.1108027-CDS-P-lacustris_contig118:193158..193233	1622815494.1108027-CDS-P-lacustris_contig118:193158..193233	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig118 193159..193233 +
1693493572.5263686-CDS-P-lacustris_contig118:193158..193233	1693493572.5263686-CDS-P-lacustris_contig118:193158..193233	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig118 193159..193233 +
1622815494.1203868-CDS-P-lacustris_contig118:195518..195599	1622815494.1203868-CDS-P-lacustris_contig118:195518..195599	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig118 195519..195599 +
1693493572.5387747-CDS-P-lacustris_contig118:195518..195599	1693493572.5387747-CDS-P-lacustris_contig118:195518..195599	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig118 195519..195599 +
1622815494.1337771-CDS-P-lacustris_contig118:196139..196367	1622815494.1337771-CDS-P-lacustris_contig118:196139..196367	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig118 196140..196367 +
1693493572.5555735-CDS-P-lacustris_contig118:196139..196367	1693493572.5555735-CDS-P-lacustris_contig118:196139..196367	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig118 196140..196367 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig118.1374.1	prot_P-lacustris_contig118.1374.1	Pleurocladia lacustris SAG_25_93	polypeptide	P-lacustris_contig118 191938..196367 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-lacustris_contig118:185982..196367+
coding sequence from alignment at P-lacustris_contig118:185982..196367+

protein sequence of mRNA_P-lacustris_contig118.1374.1

>prot_P-lacustris_contig118.1374.1 ID=prot_P-lacustris_contig118.1374.1|Name=mRNA_P-lacustris_contig118.1374.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=185bp
MPLLGWLTRELDMNHYDMRCLILRHPRLMAYRVTSHVAPKTKWLRERLGL
GQAALRKLVTTYPAVLSRSVEKNLEPKCKWLEERLGASQEEVAVLIKRFP
LIFGYSTTQNLEPTVAFFAADLSGEKEEIKSTIMSCPSILSRSLDKRMLP
RARQMRAKEIEPRFGPHKWVVSTYTDTQFTRWLEG

mRNA from alignment at P-lacustris_contig118:185982..196367+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-lacustris_contig118.1374.1 ID=mRNA_P-lacustris_contig118.1374.1|Name=mRNA_P-lacustris_contig118.1374.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10386bp|location=Sequence derived from alignment at P-lacustris_contig118:185982..196367+ (Pleurocladia lacustris SAG_25_93)
TGCACGGCGCTGCGCATACGATACGTCTTGTTCTCTTTTTGCGCGCACAC
ATACCTCCGTGTCCAGCATACACCAGGCGCAGTGCGTGCTCTTGTACAGT
TGTAGGACCGCTCTAGCGGCGGGTTGGGCGAGTCACTAAGTCGATCGTCG
TGTCGTGGAGTCCTTCGTTGCGCAGATATCGAGTGTTGAAGCTACGCTAC
TCCTTGCCCGACCACGACACTGCAGCTGCTGCGGCTCTGGCGCTCTCTGG
AGACAGCGTTACGCCCTTCCCTGGATCGTCGGTCATCGCTTATTTTCAAG
TATCCGACAGAAGTAGCAGAGGCAGCCCCTTCCTCAGCCCCCAAGGTGCA
TTTACCTATGAGCGATGTTCTGGCGCTTCCCCAACATCGGAATGAAGGTG
AACCGACTTTGACAGGGCGGAAACGGTCGCAACCTACAGGGGGCTGGGAC
TCGTCAGCAGGTGAAGGCAGCGACCTAACCACGCGGCATATTTCACCCTC
AAGGGTTATCGTGCAAGGCGCGGCTGCTGCTGGTGCAGCTACTGCCCCCG
TTGGTGGTGCTGGAGACAGGCTTGAAACGGGCAAAGATTTGCTATCTGCC
AGCGGCATCAACACAGCAGTGACGGACGAAATAGAGCACGACGTCGGCGA
AAGCCCGGTCGCTTTCTCTGTGACAGCAGCTACCAAGCAGGATCTAGGGT
GGAGTGATAGCGACACGCCGGCTGCCTCTGTTGCTCTGCCTCCCGCAGCC
GTTGGGACCGCTGCTTCCGTCGATGGTAGCGCTGACTGCTCGTCTTGCCT
AGGGGATTTCAATTTCAGTTTCGAGGTGAGAGGCGCTTTGTCAGACGACC
ATTCTTGTCTTTCCCGGTGTTGGATACATCATCGATCATCGCATCAAAGG
ACTATATGTACCCACCCGACTCCCCGAGACAGTCATCACGCGCATGCGAC
GAGTTTTTTGCTACGACGGTGGAGTGATGCGTGCGTACTCAAGCTGGTTC
ACGGTGAATGCTCTTGTAAATTTTCTCAACAGCTGGTACCACGCGGAAAA
ACCATCGAATCTGGAAAAGATTGGTGCAGCAACAGTAACAAGTATTGCGC
TGACCGCCGTGAAGAGATCAAGAGGGCGACATCCGTAGTTTTCCTATTCA
GGTCCTAGCTGTGGCGCTATGGGCGAAAAAGAACCTCGACCAATCAGGGG
CAGAAAAACAGTTTGTAGAACTAAAGAATCGTATTGCGATCCTCAACTAC
AACAGTATCGTGTTTTTCATGTCATACATGCAGTGTCCCCCGTGTTCCAA
GGAAGCAGCAAAAAATGAAAAAATGGAATTGAAAAAATCATCTTGGGGTC
AATCGTCGAGGTATGGCGAAAAAAAAAGAGTGAGTAATACGGGCGTTGGT
AAGCGTGGGCGGCTCAGGCATGCCTGACGTTTTGCCTGAGAGCCATTTTT
CAGAAAGGGGTTCCCTGAGGCGGTGTTTTCGTGCCTGGGATGCCTGACTT
TTTCCAGGCACAGCAGACACCGCGAAAAACGAAGCCAGGCAACCGTATTA
CTAGAATGAGGGGTAGGTTTAAGAAGCAGCGTGTGTGCGTCAGTGGGTGA
ACGCTTGTCTGCTTCTCAACTAACTGCGTTGAGCCGTATGTTGCGGGCAC
ACCATTGGTGCTGGCGGCAGCAGGATCGCCAGCTGTGGTGCACTTCCCAA
CTTTTTTTTTTTCTCCATCCATACCCGAACTGGCTCTTCTTCAGAGAGCG
CTGGGAAAAAGAAATGCTGGAGAGTCAGAGAGTACAAAGCGCTGCTGCCG
ACAGAATACGGAGGGCTGTGTAGGTATCTCCAAGCGTACTTCAGAGCAGA
GTGCTGTCAGGAGTAGTAGTGTGTGTCGCTCTACAGAAGTCAGTGTGGGC
TGCTAGTGGTCGTGGAGGACACAACACGTAATACACCGTCCTCTCTCTAA
AAAGACAGCAGAGCAGCAAAAAAGCGAAACATAGCAGTCACGACAGGCGA
CACAGATGGGGCCTGTGGAGGTATCTCTAAAGCGTATGTGACAGGCGACA
CATAGGGCCTGTGGAGGTATCTCCAAGCGTATATGTATCCTATAGGGCAG
AGTGGTGATGTGTGACGAACACTGCTGTGTGGTTCAACAGCGGCAGAGGG
CACAACTGTGTGCATCGGGCTGCTTGCTGTGTGCCCGTTCTTTGCCCTCC
TGTGGCGGCATTTTTTTTTTTCACGCACCCCCACAGTGTCCTTCCCGCCG
GTGCGCGTTCGTGCTATGCGCCACAGTTGCATACGATGGGTCTCTAAAAC
CTATCGAATATGCTCCGACAAGTCTCAGGCAAGTTTCAGGCATGTTACCT
GACACAGTGTTGGTACGACGGGTCTCTAAAACCTATATAATGAACTCAGG
CATCTCCGGCCAATTTCAGGCATGCGTAAGGCATGATATTTGGTGTCAGG
CACATGCCTGAAATTTTGCCTGACCCCAAAAATTTTCGGCTGCGGCGGGC
TCACCAACTTTGCCTGAGGCACGCCTTCGGCGTGCCTGAGCCGCCCACGC
TTAGGCGTTGGCGTCGTCGGAAAGTAAAATATACTATTGTAACATGTCGT
ACGCATATGCATATAAAGCACACGGTTCTTAGCAAAAAACACATCACCCG
TGCCCACGCTTAGGCGTTGGCGTCGTCGGAAAGTAAAATATACTATTGTA
ACATGTCGTACGCATATGCATATAAAGCACACGGTTCTTAGCAAAAAACA
CATCACCCGTCTTTTTGTATTTGACGGGTGATGTGTTCCCTTGTTTCTTT
CCTCGAACATGCCCAATGGTCTTCATGTTTGGCATGATGATAGGTTTGGG
TGTGGTCAAGTGAGTCCAGAAAAAGAAAATTGCGAAGAGACTTCTATTTG
GTTAGGGCTTAGTGGCCTTTCAGGGTCTTGTGAATAAGGACCCGCGGAAG
CCGGTTCCAAATGCTCCAACAAAGCAATTCGAAGCTTTTCCGTCGCTGCC
TTGGTTAAGGAATGTCTGTACAAAGTTTCGTTGCATAACTCATTCAACTG
ACGGATAACGGTCGGTCTATGCGTTAAATTGCCAGTTTTATACTCAACCC
AAGTAATTAAAGGGGTTTGTACACCCTGCCGGACTTGAGCGCAATTTCTC
ACGCGGTGTTTTCGAGTTAATCCTCAGATTTCGCACAGTAGTGATAGCTT
AGATCACTACGCGACTCGTGTGATTAGGCTTCTTTTTCTTTTTCACCAGA
TATCGGGGGTCCCAGCAGGCCCATCCGACCCTCCTGGACCCTAAAAAACG
CTGGGACCCCGGATATCTGGTGAACGATTTTTTTTTCAAAAAAGCCTAAT
CGCAGCGAGTTGCGTATTTACCTCGCTTATCATGGTGCAAAAATTGAGGG
TCTACCTCGAAAAACTGGCGTGAGAAATCCATGTTGATTTGTCTTCCAAA
AACCCAAAAACTATAAATAAATAAACTTACCAACCGAGCAACCAAACAAG
ACGATCAAAACAAAAAACCCAGTAACATAATAATTTATATTGTCTCCCAA
AAACCCAAAAATGAAAATAAACCCAACAAATAAACAAGCAACAAATAATT
TTATTTTCAATATTGTCTCCCATAACCCGAAAAATATAAATTTACCCAAC
AAGCAACGAATAATTTTCATTTTCAACGTCTGTGTCGAAGTCCTTACTTC
ACTCATGCGCCATTGACTTGTCAAAGCTTTCATCTGTCCGGCAAAAGTAT
GCCCCCCTGCGAGATACAGCAGCATCCAAAGATATTGTCTCCCAAAACCC
AAAATTAAAAATAAACCAAACAACCAAGCAACAAAACTTTTATTTTTGTA
CATTGCTCCAGCACGAAAATTAAAATCCTATTCCTGTATTGTCTCCCAAA
ACCCAAAAATAAATAAATAATAATACCCCCATTGTAATTGTTGTGTTTAC
TCACGAATTAAATAAATAGCCGCTTTCCACTGCTGCTTTTGTTACCCCGT
TGACCTTGAACTACCCGCCTGTAGGCCTGCAGCACTGTTGTAGGACTGGA
CGTGAACCCAACATCCATAAGAGATGTACAGCATTTGAGAGAAGTCCACA
TGGGTACTTGTAGGTGACCACTCATCACAACCCAAGCTCGCACAAGCACA
CAGAGTGGGACGGTAGTGACTCAGTTGCTACAGCGCTTCACCTGTCGACT
CGCTCGCCCGCTCTTACACAAAATCCACTTCGCCGCACAATGAACTGCTA
CAATTGCACACGCCCATAGTCAACACGTACACAGGGCATACCCCACCCTA
CGCTGCTGCTACTACTATACTGTTTTGCTGTGCATCATTGTCGTGCATAC
ACAGCAGGGGTAGCTTGCTTAATTGTCAGGTCTGGTAAATCCACGCTTGT
GTAAGAGGAGCTCTAGTGAGCCCGAAGGCCCACGCATGTGGTGGGAGGCA
GGGGAGACAGAGAAGTACAGAAGTACTCTGTGGGCCTGAGAGGGTCTTCA
AACACTTTTTTTTTATAATTTGATGATGAAAAAAATGTTCATTTGTTATT
TTACTGAATAAAGCGTACTTGGCAGGCACCGGAAAACAAGGGACAGCGCG
CCTAGCACGCTCTTCCGTTGATTTTTTCCCACTCAGCGTTGATGCATTTG
CCCTTAGACACACCACGATCCTGCCGCGGACGCTCGTTGCGACCTCTGTG
CCCAGATAGCTTCTACCTTGCAGAAGTACAAGTACACACTTGGCTCGAAG
CTGTGTCCTGCTCGTTTTACCTCTCCCTCCCCCATGTTTCCTTTTTCTGG
TCAAAAAAAAGAAGAAGAGCCAGACCCAGAGGGGTTCAGAGCGCCATTTT
GGCTTCCCACAGCAAAATCGATCTAAGAGAAATCTTGTCTTGTTCCTGTG
GCATTCTCTTTCATCGATCCCTATAGAGAAGAGCCCAACTCGCATACACT
CACGGAGCTGCGGAAACCATGCCCTGTGCAGCTGGCAGCCTCTGCTTGTG
CGTCCCCGACAATGCGCCAGACCCGCCAAACTTCACGAAGCACCTATGCA
GGGTCTGCGGAGGCTACCTCCACGGAATGTGTGGCGTGGTCGACGTCGAC
ATGCGGGTCGACCGCCACACATTCCGTGGAGGTAGCCTCCGCAGACCCTG
CATGGGTGCTTCGTGAAGTTTGGCGGGCCTGGCGTATTGTCGGGGACACA
TAAAGGGCATGGTGTCCGCAGCTCCGTACGTGTGTGCGAGCGGGCTCTTC
TTCATGGGGTTCGATTCAAAAGAGAATGCCACAGGAATAGGACAAGATTT
CTCTCTTGAATCGATTTGGCTGGGCGGAGCCAAAATGGCGCTCTTAGACC
GGCATCTCTCGTAAATCAACGCTCCTAAACCGTGCCGTCACGGTACTGAA
GGATCAGCCGAAAACAATGAAACAATGGAGGTATATTTTGGGTAAGGGTT
GAGAAGGAGCGTGTGGGCGTCAGTGGGTCCGCGGTACCTTGGATGCTTCT
CAACCAACAGCGATAAGGTGTGTGGCCGGTGCCGGTCGTTGCTATTGGGC
GCAGCTGTGGTGCTGGCAGCAGCAGGACTGCTAAGTGTGATTCTCTTGTT
TTTCAATTTCTTCCAGCCGAACTGGCTATGAGTACAATTTGGTCCGGGAA
GGCCTCACCAACACACGGTATTTACGTAAAGTGTTCGTTCGGACCGCGAC
CGAACTCGCTGAATCGTTCTGTAACAACATCCTTGAAGGGCAATCGATCC
GCCATGTCGAAGGCGGGCAGACTGACTGCTGCTGCAACGTGAATCGCTTC
ATTCTACTGTGTTTCTGCCACGTTCTGCCGGACGTTAATCGAAAATGGCG
ATGCAATCCACTGCAGGAACTGAACATCTCCATGCATTGCATTCCAGGAA
CTAAACAAAATGTCAAGAGATACCCGACGGTCAACACGCTCGGAGCGCGC
ACCCCGATGCCCCTTCTCGGGTGGCTGACCCGCGAGTTGGACATGAACCA
TTACGACATGCGATGCGTAAGTGCACACGTGGGTTCGCGCGCATAGCAAG
CCTGTACTTGCGTGCAGCAGAAATGGCAGACTGTCTGGCTCTGTTGATGC
CAAATTGCGACATACTTAACGTGTCAAAGGCGAATGTTTTCCGAATGAAC
AGGAGAAAAGATCGTTGTCTCGCCATCTTTGAGCCCAAGTACGCACTACT
GTGGACATGCAATTTGCTACCACATGCATGCATGGTTGTACAATGGCTGA
TCATACTCGCTACAACACGCAGTTGTCATAGGTCTATTGCTAATGAGGTG
TGCTTTGCATATCTACCGCAGCAGTGGATGTCCCTTATACTCTCTGGACA
ACTAAGCTGAGTTCTGGCCATCTCGTATATAAATATTTGTATATCATACA
GTCGAGAGAGAGATATTTTTTTTTTGGCCCATGTCGAGGCATGTTCATGA
CACACGCGTGGATGGATTGGATGGATTTTCTGTCTTTTTTTCGCATTCGG
CTTTTTTGTGTGTCGTGTGTGACCGCCCACCTATGTTTCTCTTCTCTCCA
TCCCCTCTCTCTGTCCCTACGTCGGTAGTTAATTCTGCGGCACCCCCGGC
TGATGGCGTATCGAGTTACGTCCCACGTTGCTCCAAAGACCAAGTGGCTC
AGGGAACGACTAGGCTTGGGCCAGGCCGCGTTGAGGAAGGTGAGGGCACA
CTAGCACAACGCGATAGGGGATGAAGCGAGTCGATTGCGTCATATCATCA
CTATCTTTCTTGGCAGCTTGATAAAGTCAAGGAGGTCCCGTCTTGTATTC
CGCTTGCCATTCCACTTTTGTTGTTGGCTTTAGGTGCGAAGGGCGAACAA
ACAGAAAAATTGTGGCATCGTAACTTCCCACGGCGTCTTGTTGGCCCGCC
ATCAACATCATCAACAAGGGGTGAGGGTAGAATCACCGAACGCCTTTTCC
GATCGATGGAAGATCGGAAAGGATAGCGATAGAGGGCCAGCCGCCAGCGT
CCCCTAGTTGAAGGGCCGTGCTGCGTCACACTCCATCGTCTGTCTGGGTC
TTACGCCATTGTGTTCAATTGTGTGCATGTGCCGATGCTGTTGCTGCCCT
TAAGCTGACGCTGCTGCTGCACGCTCTGTGTCGATGTCGATGCCCTGTCT
GTGTTGACTGGTGCGCTTTTCGCGTAGCTGGTCACAACATACCCGGCGGT
ACTGAGCCGCAGCGTGGAGAAGAACTTGGAGCCTAAGTGCAAATGGCTAG
AGGTAAGTGCCACAGACAGCCAAGGAGCCAAGGAGCCTTCTTTTTTCATG
CAGCGAGTAGAGACGTTCGTGCCTGGTATCTATCGTATGAAAGCTTTTCC
TTGGAATTGGAAATGGAAATGGAGATGGAAACGTTTCCCGGGAACAAAAT
GGAAAGGGGATTTTCCGTTTCACCAGGGCCCCTTGGTGGCTTGTGGGTGA
GATGAAAACCACCCTCAAAAAGTGTTTGGCTTTTCATTGTTTTCATCAAA
AGAGCTCGAGAGCTGGGGTCATCATCGACCATTCTCTCGGAGCAATCTAC
TTGTCATGTGTTGACAATGGCTATGCTGCTCCCCGCCAGCCGACCGGCCT
GGGGTTGTTTTTCACGGGTGGACGTGTGTGATCCTGATCCTATGCTGATG
GGTCGGCGGCTGGTGGCGGCGGTTCTTCGTTGACAGGTTCAAGGCTGAAG
GGCGACGTCGTGACCTTTGGACGTCTCGGCGTGTCTCAGCTGTAGAAGCG
GACCTGGCTGTCGGAGCAACAAGACGCCAGCGTCGGTCGTTTCTAGCGCG
CGGAACAGATCTTGCTCCGACATGGAATATTTCAGGGTGAAGACGCCGCC
GACGGGCTACTAACGCTACGGCACACCCGTAGCCCGTCGAGTCTTCACAG
TCAAATATTCCATGTTTGGGCAAGATTTGTGCGAGGTGTTGAACACGACC
AACGCCGGCGTGGTGTTGCTCCGAGAGCCAGGTCCGTTCCTGTAGCGAAG
ACGCGCCAAAACGCCGAAAGGTGGTCGCTCTTGCACCTGTGGACGAATAA
CTGCCGCTTCCTGCCGAAACGGTGTGCCACGAACTATTCCTTTGGTTATT
GCATGTGTGACCCCATTTTCAACACCAAAATACCGCAACAGGAGTAGCTG
GTCCTCCAAAATAGCGTCTTGGATTGGTATAGGTTGTTCGCCTTTTCTAC
GCAGAAGCTTGACGGAAAAGAATCGAGCAAGGAGCAAGCAACTCCCTTTT
GAAAGCTTTGTGTTTCTGGCCTTCTACAACTGTAGAAGTGCGGATGAGAC
GGGATTTGTTGGTGATTTCTATAGTGGAGGGAGTGTTGTCTGGACACAGG
TGCTGCAAAGTTTGCAGAGCGAACCCTCCGACCTGGGCAAGTTCCAGCTA
CACCCAGTGTTGCTTCTAAATCCAATTTGATGAAATTTCGGCCACCGAGT
CATGAAGAAGAAATGAAAAGAAGATTGGAAGATTGGGCTGATTGTTTCCC
ATTTTTTTGCTGGTCGGTGGCGGCGTCGTCTCCAGGGGCCATGTTTGGGG
TGTAGGGAATTCCGTGCGATCCACTTGCTCAAGATTCTTCGGGCTGGTGT
GTGTTTGTGCTTCTGTTGCCGCGGACAGTGGTTGGCTTGCGTCGATGATG
ATGATGATGATGATGATGGCGATTAGATTGTCGTGTTGTTGTGTACTTGT
AACGAACGGTGTTGTAACGGTGTTGTGACGGTGGTGGTGATGGTCGCCTT
CTTTCCCATTTTTTTTTACTTGTTGCTGTTCGTCTTTTATTGTCTTCACT
TTTGAAACCATCCCGGTCTGTCTCTCTGTCCAGTACCTCCGCCTGTCACA
ATCTCCCCGTACTAACCTAACGCTTGACGCGGTCAGTCCCCGTGGTCACA
GGCTAACTTACCTAAAAAACGTAAACAAAGATACAATGGACCCGAGGGTT
CCGCAGAGCGATAAAAAAAACAAAACAAATACGAAAAAAAAACAAAAAAA
GGACAAAAAAGGACAAATAAATGCAGTGGAGCCCTCCGCTTTGACTACCA
TATGTTATTTGTTATTTATTCCCTTGGTTGGTGGTGATCGTGCTTAATTC
TCATTTTTGTTTTTGTTTTTGTTTTTGTTTTTTCTGTCTATTTTCTTTTC
TTGGGCTCCTTTTCGTTATCTTTTGTTTGGTTGGCTTCGCGTGCCGACCT
ACCCCCTCTCGTTCAACACGTCGACATATAACCTGTGACACCGAATTTCC
TGGGGGCTCAGCTCCGTTCCTGTTTGTTGTTGTTGTTTCTTGTCGCGTTT
GTGTTGACTCTCTGGGTCCATTGCACCTTACTTTTTGCCCCAATAGGGTA
CAGTAGTCAGCTTTTGACCACGGAAGTCAACCGCATCAGTGGACAGGTAC
GGACGATAGAAGGTACTGAGTAGAGATTGGAACGACTTTTAGTATGAAGA
CAACTACAACACCACCACCACCAATAACAACAACAACAACAACAACAACA
TGCATATGTCTGGTGAACCCTCGGCTCGCACTGGCAGGAGCGACTCGGAG
CTTCCCAAGAAGAAGTGGCAGTACTGATCAAGCGGTTCCCCCTGATTTTC
GGGTACAGCACCACCCAGGTATCCTGCGGAAATCCACGGGTTCCTTGTCG
AGCCATGGAAACGAAGGCATGCTAGACAAAAGAAGTCGTCAAAACAAAGT
TGCGCTCTACGATCAACTCTTTGCTTGAGTATGTGGTGTGAAAAGCTTTC
GGATTTTCTCAAGGTTTATTTTCTCAAGGTTTGATTGAGTGGTAGGAAGG
GCGACGAACTACTTTATTGCTTTATTTCGTGTTTTGTGTTTTCACCGTTC
GTGTCCGGGAGTTTCTGTCGGGCTGTAGGGCTGCCTTAGATATCATAGAT
ATCGACTTTGTGTTGAGTTTGTTTACTTGGAGCTTACCACGGCTGAATCG
AGGCTACAGCAGTAGGGGCAGCAGTAACTCCAAAGTGGTGAGGATATATG
TGCCTCCGCGCGCTCAAAATTCCCAAGAAACAAGGGGACGTGAAGTTTTC
GGCTTGGCGGAAAATTCTCGGAAATTTCGTGTCTTGATCCCAATGTCCTC
CAGCTTTTTGATGCGCCGCCCCCCTCCGCGTTCGCTTCCGCTGCTTCTGC
TTCTGCAGAATCTGGAGCCAACCGTAGCGTTTTTCGCGGCTGACCTGAGC
GGCGAGAAGGAGGAGATAAAGTCGACCATCATGTCGTGCCCGTCCATCCT
CAGCCGGAGCTTGGACAAGCGCATGTTGCCGAGGGCTCGGCAGATGCGCG
CGAAAGAGATAGAGCCGCGCTTCGGACCGCACAAATGGGTTGTGTCCACC
TACACCGACACGCAGTTCACCCGGTGGCTCGAGGGG

Coding sequence (CDS) from alignment at P-lacustris_contig118:185982..196367+

>mRNA_P-lacustris_contig118.1374.1 ID=mRNA_P-lacustris_contig118.1374.1|Name=mRNA_P-lacustris_contig118.1374.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1110bp|location=Sequence derived from alignment at P-lacustris_contig118:185982..196367+ (Pleurocladia lacustris SAG_25_93)
ATGCCCCTTCTCGGGTGGCTGACCCGCGAGTTGGACATGAACCATTACGA
CATGCGATGCATGCCCCTTCTCGGGTGGCTGACCCGCGAGTTGGACATGA
ACCATTACGACATGCGATGCTTAATTCTGCGGCACCCCCGGCTGATGGCG
TATCGAGTTACGTCCCACGTTGCTCCAAAGACCAAGTGGCTCAGGGAACG
ACTAGGCTTGGGCCAGGCCGCGTTGAGGAAGTTAATTCTGCGGCACCCCC
GGCTGATGGCGTATCGAGTTACGTCCCACGTTGCTCCAAAGACCAAGTGG
CTCAGGGAACGACTAGGCTTGGGCCAGGCCGCGTTGAGGAAGCTGGTCAC
AACATACCCGGCGGTACTGAGCCGCAGCGTGGAGAAGAACTTGGAGCCTA
AGTGCAAATGGCTAGAGCTGGTCACAACATACCCGGCGGTACTGAGCCGC
AGCGTGGAGAAGAACTTGGAGCCTAAGTGCAAATGGCTAGAGGAGCGACT
CGGAGCTTCCCAAGAAGAAGTGGCAGTACTGATCAAGCGGTTCCCCCTGA
TTTTCGGGTACAGCACCACCCAGGAGCGACTCGGAGCTTCCCAAGAAGAA
GTGGCAGTACTGATCAAGCGGTTCCCCCTGATTTTCGGGTACAGCACCAC
CCAGAATCTGGAGCCAACCGTAGCGTTTTTCGCGGCTGACCTGAGCGGCG
AGAAGGAGGAGATAAAGTCGACCATCATGTCGTGCCCGTCCATCCTCAGC
CGGAGCTTGGACAAGCGCATGTTGCCGAGGGCTCGGCAGATGCGCGCGAA
AGAGATAGAGCCGCGCTTCGGACCGCACAAATGGGTTGTGTCCACCTACA
CCGACACGCAGTTCACCCGGTGGCTCGAGGGGAATCTGGAGCCAACCGTA
GCGTTTTTCGCGGCTGACCTGAGCGGCGAGAAGGAGGAGATAAAGTCGAC
CATCATGTCGTGCCCGTCCATCCTCAGCCGGAGCTTGGACAAGCGCATGT
TGCCGAGGGCTCGGCAGATGCGCGCGAAAGAGATAGAGCCGCGCTTCGGA
CCGCACAAATGGGTTGTGTCCACCTACACCGACACGCAGTTCACCCGGTG
GCTCGAGGGG