mRNA_P-lacustris_contig118.1373.1 (mRNA) Pleurocladia lacustris SAG_25_93
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig118.1373.1 vs. uniprot
Match: D7G421_ECTSI (Acyl-CoA thioesterase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G421_ECTSI) HSP 1 Score: 822 bits (2122), Expect = 2.820e-292 Identity = 433/590 (73.39%), Postives = 471/590 (79.83%), Query Frame = 3
Query: 51 MKAAQRTWAVRSIDALRIFERMRISRGATPAFRNRYINQGIMRITSSFGLATVRGSEAKRFRGSVPQVSASTHFMPTKEEEVLPGAFKSPITKALWEIRRGEMDFQEKRRKAGGISPEGNLPPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLIRIGRILEDLDALAGNIAFKHCSEDPSFPLLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSLVINMRQVKTAATMCSTSPPGMCYVGDDPWADSDSDSCWLDANFTFVARDRETGRSRAVSPLDLGRDPLQDEAGDDSDGSPRERDPEYGWRALWRAVHSHKSRQALERNAAKKAGGRAAHALRWFGAAAEGFVELEASRLKREEEATNLVSAGFPLLHLPALANPHAVLMSQTETSSTLICMPQHRNTANRIFGGFLMHKAYEVAFCAAFMFGGSRPRFSEIDEVVFLQPVDVGDLVKMDASILYTKEGKECGS-PQACVEVLASVVRPETIDSRVSNRFNLTFSFPELVAGRDMAAQ------NGAPTGLLRSVLPANATEASRIVAAMHRDRLQDAADEQP*ASAQGAHEYLGW*I*RITSPVKELLTDRC 1799
MKAA+R W R+ + + R + F N + +S+ TV S A R G +P VS+STH +P+KEEEVLPGAFKSPIT+ALWEIRR EM+FQEKRR+AGG P NL PVPPSLSRSAIHYPFSTDSFLREDYRNPGGL+RIGRILEDLDALAGNIAFKHCSEDPSFPLLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSS+VINMR CSTS PG+CYVGDDPWAD D DSCWLDANFTFVARDRETGRSRAVSPLDLG DPLQDE GD SDGSP ERDPE+GWRALWR VHSHKSRQALERNAAKK GAAAEGF+E+EA+RLKRE+EA+ LV+AGFPLLHLPALANPHAVLMSQT TSSTLICMPQHRNTANRIFGGFLMH+AYEVAFCAAF FGGSRPRFSEIDEVVFLQPVDVGDLVKMDA ILYTKEGKE GS PQACVEVLASVVRPET+DS+VSNRFNLTFSFPEL +G + + + +P LLR+VLPANATEASRIVAA HRDRLQDAAD++ G T+PV L +C
Sbjct: 1 MKAARRAWTTRNANVAGMLRRRANRVNSLAGFMNNNNSSP----GTSWAAGTVDASSAVRCYGRIPNVSSSTHIVPSKEEEVLPGAFKSPITQALWEIRRAEMEFQEKRREAGGRPPRENLRPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLVRIGRILEDLDALAGNIAFKHCSEDPSFPLLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSMVINMR--------CSTSAPGVCYVGDDPWADGDDDSCWLDANFTFVARDRETGRSRAVSPLDLGTDPLQDEPGDGSDGSPGERDPEHGWRALWRVVHSHKSRQALERNAAKK------------GAAAEGFLEVEAARLKREQEASTLVAAGFPLLHLPALANPHAVLMSQTLTSSTLICMPQHRNTANRIFGGFLMHRAYEVAFCAAFTFGGSRPRFSEIDEVVFLQPVDVGDLVKMDACILYTKEGKEAGSSPQACVEVLASVVRPETVDSKVSNRFNLTFSFPELASGVEEGNRPCADGFSQSPAALLRTVLPANATEASRIVAAKHRDRLQDAADDREGLPRGGQ-----------TAPVVMRLGGKC 555
BLAST of mRNA_P-lacustris_contig118.1373.1 vs. uniprot
Match: A0A835Z9W3_9STRA (Putative acyl-CoA thioesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W3_9STRA) HSP 1 Score: 297 bits (761), Expect = 5.460e-89 Identity = 193/469 (41.15%), Postives = 260/469 (55.44%), Query Frame = 3
Query: 300 PGAFKSPITKALWEIRRGEMDFQEKRRKAGGISPEGNLPPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLIRIGRILEDLDALAGNIAFKHCSEDPS------FPLLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSLVINMRQVKTAATMCSTSPPGMCYVGDDPWADSDSDSCWLDANFTFVARDRETGRSRAVSPLDLGRDPLQDEAGDDSDGSPRERDPEYGWRALWRAVHSHKSRQALERNAAKKAGGRAAHALRWFGAAAEGFVELEASRLKREEEATNLVSAGFPLLHLPALANPHAVLMSQTETSSTLICMPQHRNTANRIFGGFLMHKAYEVAFCAAFMFGGSRPRFSEIDEVVFLQPVDVGDLVKMDASILYTKEGKECG-SPQACVEVLASVVRPETIDSRVSNRFNLTFSFPELVAGRDMAAQNGAPTGLLRSVLPANATEASRIVAAMHRDRL 1685
P A+KSP+T+A W++R + QE A + + + P P S SR +I Y FS +S LR Y NP G IRI R+LEDLDALA IA +HC+ + S +P+LVTASVDRI +++ P L+ D+ L G +VWTGRSS+ I M + + P S WL+A FTFVAR R+TGRS + PL L P +DEA +++A++R ++GG A G A E EA+ A L+ G L +P LA+P +VL+ T SS ++CMPQ RNTANRIFGGFLM +A E+ F A+ G+ P + +DEVVF QPVDVGD++K+D+ +L T+ G G SP+A VEVLA V+RP+ +SNRF+ TF FPEL A RD +G P L+ VLP++ EA R+V M R L
Sbjct: 13 PEAYKSPLTEAFWDLRSVDKQLQEVEELA---AKQRHAHPRPASASRKSITYDFSRNSMLRSAYANPWGFIRISRVLEDLDALAATIAMEHCATECSAHGVTFWPMLVTASVDRIEMKQQPMLERDLVLSGHIVWTGRSSMQILMHCAVAQDSTPAAEDAAATAAAAAP-------SPWLEARFTFVARSRDTGRSTPIPPL-LIETPKEDEA-------------------------FRHAQRAMDRKKLLRSGGGGATLAGANGTAPVSSPEAEAA-------AAALLREGRLLKAMPCLADPRSVLVGDTAQSSVIVCMPQERNTANRIFGGFLMGRALELGFATAYTTVGAVPFTAVVDEVVFHQPVDVGDILKLDSCVLQTRAGGALGRSPRASVEVLAHVLRPDKRTMHLSNRFDFTFKFPEL-ARRD----DGEPQRELQRVLPSDVDEAQRVVQVMQRQAL 433
BLAST of mRNA_P-lacustris_contig118.1373.1 vs. uniprot
Match: W7TVW1_9STRA (Thioesterase superfamily n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVW1_9STRA) HSP 1 Score: 272 bits (696), Expect = 5.630e-80 Identity = 171/458 (37.34%), Postives = 236/458 (51.53%), Query Frame = 3
Query: 303 GAFKSPITKALWEIRRGEMDFQEKRRKAGGISPEGNLPPVP--PSLSRSAIHYPFSTDSFLREDYRNPGGLIRIGRILEDLDALAGNIAFKHCSEDPSFPLLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSLVINMRQVKTAATMCSTSPPGMCYVGDDPWADSDSDSCWLDANFTFVARDRETGRSRAVSPLDLGRDPLQDEAGDDSDGSPRERDPEYGWRALWRAVHSHKSRQALERNAAKKAGGRAAHALRWFGAAAEGFVELEASRLKREEEATNLVSAGFPLLHLPALANPHAVLMSQTETSSTLICMPQHRNTANRIFGGFLMHKAYEVAFCAAFMFGGSRPRFSEIDEVVFLQPVDVGDLVKMDASILYTKEGKECGSPQACVEVLASVVRPETIDSRVSNRFNLTFSFPELVAGRDMAAQNGAPTGLLRSVLPANATEASRIVAAM 1670
G FKSPI LW R + + I PV PS S++++ Y F+ + FL + Y NP G R G++LED+DALAGN+AFKHC +D PLLVTASVDRI L +P+LD D+ + GRVVWTG SS+ I++ + P W+ A+FTFVAR +T ++ A++ L PE A R S ++ R +KA G EG L++ + E L+S PL+ +P LA+P VL+ T S++ I PQ RN NR+FGGFLM +AYE+A+ ++F GSRP F ++ V F PVDVGDL++ DA++LYT G++ GSP V+V+AS+ RPET+ S +SN FN F P G PT +R VLPAN +A R++ M
Sbjct: 48 GRFKSPIITHLWSQRATGKELE--------IDVRSPTEPVERTPSESQTSVTYEFTREPFLSQSYENPWGFFRKGKLLEDMDALAGNVAFKHCEKDGKVPLLVTASVDRIRLSSNPKLDRDMEMTGRVVWTGSSSMQIDLE----VHALPDAKP-------------------WISASFTFVARHPQTAKATAINKLK----------------------PES---AAERETFSAVEQKNQRRKTVRKAKG------------TEGSPSLKSGAVDVETMIKLLLSQARPLMEMPCLADPTCVLVDNTRASNSSIMQPQQRNMLNRVFGGFLMRRAYEIAYSTCYLFAGSRPEFFQVAHVDFTSPVDVGDLMRFDAAVLYTHTGQQTGSPHVHVQVVASICRPETVHSTISNTFNFVFRVP------------GRPT--VRKVLPANLDQAKRMIERM 423
BLAST of mRNA_P-lacustris_contig118.1373.1 vs. uniprot
Match: A0A078JTC3_BRANA (BnaCnng69840D protein n=12 Tax=Brassiceae TaxID=981071 RepID=A0A078JTC3_BRANA) HSP 1 Score: 268 bits (684), Expect = 1.100e-77 Identity = 176/464 (37.93%), Postives = 249/464 (53.66%), Query Frame = 3
Query: 300 PGAFKSPITKALWEIRRGEMDFQEKRRKAGGISPEGNLPPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLIRIGRILEDLDALAGNIAFKHCSEDPSFP---LLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSLVINMRQVKTAATMCSTSPPGMCYVGDDPWADSDSDSCWLDANFTFVARDRETGRSRAVSPLDLGRDPLQDEAGDDSDGSPRERDPEYGWRALWRAVHSHKSRQALERNAAKKAGGRAAHALRWFGAAAEGFVELEASRLKREEEATNLVSAGFPLLHLPALANPHAVLMSQTETSSTLICMPQHRNTANRIFGGFLMHKAYEVAFCAAFMFGGSRPRFSEIDEVVFLQPVDVGDLVKMDASILYTKEGKECGSPQACVEVLASVVRPETIDSRVSNRFNLTFSFPELVAGRDMAAQNGAPTGLLRSVLPANATEASRIVAAMHRDR 1682
PG + SP+T ALWE RR + G + L PS SR++I Y FS+D LRE YRNP IR G+++EDLDALAG I+FKHCS +LVTASVDRI+++R +D D++++G V W GRSS+ + + QV + +C + P + D A+ S+S L+ANFTFVARD +TG+S ++ + +P + W+ +A ERN +K A+G E E +LK E +L++ G L +PALA+ ++L+ T ++LIC PQ RN RIFGGFLM KA+E+AF A+ F G PRF E+D V F++PVDVG+ +++ + ILYT E P +EV+A V PE S VSNRF TFS R A ++G +R+V+P EA R++ M +R
Sbjct: 67 PGMYHSPVTNALWEARRNMFETPT----GGEDASRSELTAKTPSRSRTSILYKFSSDFVLREQYRNPWNEIRTGKLVEDLDALAGTISFKHCSSGDGSARSMILVTASVDRIIMKRPIRVDADLSIVGAVTWVGRSSMEMQL-QVIQSQDLCISFPFESVDMQDFADANHPSESVALEANFTFVARDAKTGKSTPINQV-----------------TPETEHEKMLWK------------EAEERNKLRKQ------------KRAQGKEEQE--KLKDLERLNDLLAEGRVFLDMPALADRDSILIKDTSHENSLICQPQQRNIHGRIFGGFLMRKAFELAFSNAYTFAGVSPRFLEVDRVDFIKPVDVGNFLRLKSRILYT-EATSSAEPLINIEVVAHVTSPELRSSEVSNRFYFTFSV------RPEAMKDGMK---IRNVVPGTEEEARRVIERMDAER 472
BLAST of mRNA_P-lacustris_contig118.1373.1 vs. uniprot
Match: A0A6P6WRG3_COFAR (acyl-coenzyme A thioesterase 9, mitochondrial-like n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6WRG3_COFAR) HSP 1 Score: 270 bits (689), Expect = 5.350e-77 Identity = 191/496 (38.51%), Postives = 260/496 (52.42%), Query Frame = 3
Query: 207 VRGSEAKRFRGSVPQVSASTHFMPTKEEEVLPGAFKSPITKALWEIRRGEMDFQEKRRKAGGISPEGNLPPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLIRIGRILEDLDALAGNIAFKHCS--EDPSFPLL-VTASVDRIVLRRHPELDCDITLMGRVVWTGRSSLVINMRQVKTAATMCSTSPPGMCYVGDDPWADSDSDSCWLDANFTFVARDRETGRSRAVSPLDLGRDPLQDEAGDDSDGSPRERDPEYGWRALWRAVHSHKSRQALERNAAKKAGGRAAHALRWFGAAAEGFVELEASRLKREEEATNLVSAGFPLLHLPALANPHAVLMSQTETSSTLICMPQHRNTANRIFGGFLMHKAYEVAFCAAFMFGGSRPRFSEIDEVVFLQPVDVGDLVKMDASILYTKEGKECGSPQACVEVLASVVRPETIDSRVSNRFNLTFSFPELVAGRDMAAQNGAPTGLLRSVLPANATEASRIVAAMHRDRL 1685
V + + RF S P + A H M K + PG + SP+T ALWE R F+ A L PPS SR++I Y FSTD LRE YRNP IR+G+++EDLDALAG I+FKHCS + + PLL VTASVD+IVLRR +D D+T++G V W GRSSL I + ++A S SDS L ANFTFVARD TG+S V+ + S + RE+ LW +A ERN +K + G +G E ++ E L++ G +PALA+ ++L+ T ++LIC PQ RN RIFGGFLM +A+E+AF A+ F G+ PRF E+D V FL+PVDVG+ ++ + +LYT E + P VEV+A V RPE S VSN+F TF+ R A +NG +R+V+PA EA R++ M +++
Sbjct: 182 VNSTMSPRFETSAP-IDAG-HSM-RKPISLWPGMYHSPVTNALWEARSSI--FERLNNVAADAPSPNELIAKPPSKSRTSIVYKFSTDYILREQYRNPWNEIRMGKLVEDLDALAGTISFKHCSSADSTTMPLLLVTASVDKIVLRRPIRVDTDLTIVGAVTWVGRSSLEIQLEVTQSAQE-----------------TSSQSDSLALTANFTFVARDSRTGKSAPVNQI--------------SPETEREK-------LLWE--------EAEERNQIRK---------KKRGEKRQGIDNDEETKRLNE-----LLAEGRVFCDMPALADRDSILIRDTYLQNSLICQPQQRNIHGRIFGGFLMRRAFELAFATAYSFAGAAPRFVEVDHVDFLKPVDVGNFLRFKSCVLYT-ELENPDKPMINVEVVAHVTRPEFRSSEVSNKFYFTFTV------RPDAIKNGLK---IRNVVPATEEEAKRVIERMDAEKM 602
BLAST of mRNA_P-lacustris_contig118.1373.1 vs. uniprot
Match: Q6AWX1_ARATH (At2g30720 n=10 Tax=Camelineae TaxID=980083 RepID=Q6AWX1_ARATH) HSP 1 Score: 264 bits (675), Expect = 1.270e-76 Identity = 172/463 (37.15%), Postives = 246/463 (53.13%), Query Frame = 3
Query: 300 PGAFKSPITKALWEIRRGEMDFQEKRRKAGGISPEGNLPPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLIRIGRILEDLDALAGNIAFKHCSEDPSFP--LLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSLVINMRQVKTAATMCSTSPPGMCYVGDDPWADSDSDSCWLDANFTFVARDRETGRSRAVSPLDLGRDPLQDEAGDDSDGSPRERDPEYGWRALWRAVHSHKSRQALERNAAKKAGGRAAHALRWFGAAAEGFVELEASRLKREEEATNLVSAGFPLLHLPALANPHAVLMSQTETSSTLICMPQHRNTANRIFGGFLMHKAYEVAFCAAFMFGGSRPRFSEIDEVVFLQPVDVGDLVKMDASILYTKEGKECGSPQACVEVLASVVRPETIDSRVSNRFNLTFSFPELVAGRDMAAQNGAPTGLLRSVLPANATEASRIVAAMHRDR 1682
PG + SP+T ALWE RR + G + + L PS SR++I Y FS+D LRE YRNP IR G+++EDLDALAG I+FKHC D S +LVTASVDRI+++R +D D++++G V W GRSS+ + ++ ++ T ++ S+S L+ANFTFVARD +TG+S ++ + P ++ W+ +A ERN +K A+G E E +LK E L++ G L +PALA+ +++L+ T ++LIC PQ RN RIFGGFLM KA+E+AF A+ F G PRF E+D V F++PVDVG+ ++ + +LYT E P +EV+A V PE S VSNRF TFS R A ++G +R+V+PA EA R++ M +R
Sbjct: 64 PGMYHSPVTNALWEARRNMFEIP-----TGDDASQSKLTAKSPSRSRTSILYKFSSDFVLREQYRNPWNEIRTGKLVEDLDALAGTISFKHCGGDSSARSMILVTASVDRIIMKRPIRVDTDLSIVGAVTWVGRSSMEMQLQVLQIQDT------------------NNSSESVALEANFTFVARDAQTGKSAPINQV-----------------VPETEHEKFLWK------------EAEERNKLRKQ------------KRAQGKEEHE--KLKDLERLNELLAEGRVFLDMPALADRNSILIKDTSHENSLICQPQQRNIHGRIFGGFLMRKAFELAFSNAYTFAGVSPRFLEVDRVDFIKPVDVGNFLRFKSRVLYT-EATSSAEPLINIEVVAHVTSPELRSSEVSNRFYFTFSV------RPEAMKDGLK---IRNVVPATEEEARRVIERMDAER 450
BLAST of mRNA_P-lacustris_contig118.1373.1 vs. uniprot
Match: A0A6D2JD65_9BRAS (Uncharacterized protein n=7 Tax=Brassicaceae TaxID=3700 RepID=A0A6D2JD65_9BRAS) HSP 1 Score: 264 bits (674), Expect = 2.470e-76 Identity = 175/472 (37.08%), Postives = 250/472 (52.97%), Query Frame = 3
Query: 282 KEEEVLPGAFKSPITKALWEIRRG--EMDFQEKRRKAGGISPEGNLPPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLIRIGRILEDLDALAGNIAFKHCSE---DPSFPLLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSLVINMRQVKTAATMCSTSPPGMCYVGDDPWADSDSDSCWLDANFTFVARDRETGRSRAVSPLDLGRDPLQDEAGDDSDGSPRERDPEYGWRALWRAVHSHKSRQALERNAAKKAGGRAAHALRWFGAAAEGFVELEASRLKREEEATNLVSAGFPLLHLPALANPHAVLMSQTETSSTLICMPQHRNTANRIFGGFLMHKAYEVAFCAAFMFGGSRPRFSEIDEVVFLQPVDVGDLVKMDASILYTKEGKECGSPQACVEVLASVVRPETIDSRVSNRFNLTFSFPELVAGRDMAAQNGAPTGLLRSVLPANATEASRIVAAMHRDR 1682
K + PG + SP+T ALWE RR E + ++GG++ + PS SR++I Y FS+D LRE YRNP IR G+++EDLDALAG I+FKHCS + +LVTASVDRI+++R +D D++++G V W GRSS+ + ++ ++ A++ S+S L ANFTFVARD +TG+S ++P+ +P + WR +A ERN +K AE E E +LK E L++ G L +PALA+ ++L+ T ++LIC PQ RN RIFGGFLM KA+E+AF A+ F G PRF E+D V F++PVDVG+ ++ + +LYT E P +EV+A V PE S VSNRF TFS R A ++G +R+V+PA EA R++ M +R
Sbjct: 68 KPVSLWPGMYHSPVTNALWEARRNMFENPTGDDDSQSGGLAAKS------PSRSRTSILYKFSSDFVLREQYRNPWNEIRTGKLVEDLDALAGTISFKHCSSGNGNARAMILVTASVDRIIMKRPIRVDADLSIVGAVTWVGRSSMEMQLQVIQAQD------------------ANNPSESVALKANFTFVARDAKTGKSTPINPV-----------------TPESEHEKLLWR------------EAEERNKLRKQ------------KRAESKEEHE--KLKDLERLNELLAEGRVFLDMPALADRDSILIKDTSHENSLICQPQQRNVHGRIFGGFLMRKAFELAFSNAYTFAGVSPRFLEVDRVDFIKPVDVGNFLRFKSRVLYT-EATSSAEPLINIEVVAHVTSPELRSSEVSNRFYFTFSV------RPEAMKDGLK---IRNVVPATEEEARRVIERMDAER 462
BLAST of mRNA_P-lacustris_contig118.1373.1 vs. uniprot
Match: UPI00053C3CB2 (acyl-coenzyme A thioesterase 9, mitochondrial n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3CB2) HSP 1 Score: 261 bits (667), Expect = 1.500e-75 Identity = 191/539 (35.44%), Postives = 273/539 (50.65%), Query Frame = 3
Query: 114 MRISRGATPAFRNRYINQGIMRITSSFGLATVRGSEAKRFRGSVPQVSASTHFMPTKEEEVLPGAFKSPITKALWEIRRGEMDFQEKRRKAGGISPEGNLPPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLIRIGRILEDLDALAGNIAFKHCSEDPSFP---LLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSLVINMRQVKTAATMCSTSPPGMCYVGDDPWADSDSDSCWLDANFTFVARDRETGRSRAVSPLDLGRDPLQDEAGDDSDGSPRERDPEYGWRALWRAVHSHKSRQALERNAAKKAGGRAAHALRWFGAAAEGFVELEASRLKREEEATNLVSAGFPLLHLPALANPHAVLMSQTETSSTLICMPQHRNTANRIFGGFLMHKAYEVAFCAAFMFGGSRPRFSEIDEVVFLQPVDVGDLVKMDASILYTKEGKECGSPQACVEVLASVVRPETIDSRVSNRFNLTFSFPELVAGRDMAAQNGAPTGLLRSVLPANATEASRIVAAMHRDRLQDAADEQP*ASA 1721
MRIS G + R I+ G RI S +++ S F G P + A + K + PG + SP+T ALWE R + + AG +S + L PS SR++I Y FS+D LRE YRNP IR+G++LEDLDALAG I+FKHCS D +LVTASVDRI+ ++ +D D++++G V W GRSS+ I ++ + + GD S S L+ANFTFVARD +TG+S ++P+ P ++ WR +A ERN +K + + + K + L++ G L +PALA+ ++L+ T ++LIC PQ RN RIFGGFLM KA+E+AF A+ F G PRF E+D V F+ PVDVG+ +++ + +LYT E P +EV+A V RPE S+VSN F TFS R A ++G +R+V+P+ EA R++ M DA E P +S+
Sbjct: 1 MRISTGRLLSHSLRRIH-GRPRIMESRKMSS---SSESSFAGEDPPIDAGSSMR--KPISLWPGMYHSPVTNALWEARSKIFE-----KPAGDVS-QSELAARSPSRSRTSILYKFSSDFVLREQYRNPWNEIRLGKLLEDLDALAGTISFKHCSSDDGTTRPMILVTASVDRIIWKKPICVDVDLSIVGAVTWVGRSSMEIKLQVFQPS--------------GDT------SGSVALEANFTFVARDAKTGKSTPINPI-----------------LPETEHEKFLWR------------EAEERNKLRKQ--------------KRAETKEDHEKQKDLDRLNELLAEGRVFLDMPALADRDSILIKDTSNENSLICQPQQRNVHGRIFGGFLMRKAFELAFSNAYAFAGVAPRFLEVDRVDFITPVDVGNFLRLKSRVLYT-EANTSAEPLINIEVVAHVTRPELRSSQVSNTFYFTFSV------RPEAMKHGLR---IRNVVPSTEEEARRVLERM------DAETESPLSSS 448
BLAST of mRNA_P-lacustris_contig118.1373.1 vs. uniprot
Match: UPI0005403031 (acyl-coenzyme A thioesterase 9, mitochondrial n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0005403031) HSP 1 Score: 261 bits (667), Expect = 4.340e-75 Identity = 178/498 (35.74%), Postives = 261/498 (52.41%), Query Frame = 3
Query: 225 KRFRGSVPQVSASTHFMPTKEEEVLPGAFKSPITKALWEIR-----RGEMDFQEKRRKAGGISPEGNLPPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLIRIGRILEDLDALAGNIAFKHCSEDPSFP---LLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSLVINMRQVKTAATMCSTSPPGMCYVGDDPWADSDSDSCWLDANFTFVARDRETGRSRAVSPLDLGRDPLQDEAGDDSDGSPRERDPEYGWRALWRAVHSHKSRQALERNAAKKAGGRAAHALRWFGAAAEGFVELEASRLKREEEATNLVSAGFPLLHLPALANPHAVLMSQTETSSTLICMPQHRNTANRIFGGFLMHKAYEVAFCAAFMFGGSRPRFSEIDEVVFLQPVDVGDLVKMDASILYTKEGKECGSPQACVEVLASVVRPETIDSRVSNRFNLTFSF-PELVAGRDMAAQNGAPTGLLRSVLPANATEASRIVAAMHRDRLQD 1691
K FR + + A + F + + PG + SP+T ALWE R +GE++ + + IS +G L PS SR+++ Y FS+D LRE YRNP IR+G+++EDLDALAG I++KHCS+ LLVTASVD+I+L++ ++D D+TL+G V W GRSS+ + + ++ + A SD L ANFTFVARD ETG+S ++ + SP + LW + + ++R K +++ + R E L++ G + LPALA+ ++L+ T S++IC PQ RN RIFGGFLM KA+E+AF A+ F G+ PRF E+D V F++PVDVG+ ++M +S+LYT E + P VEV+A V RPE S +SN+F TF+ PE A +NG +RSV PA+ EA R++ M + D
Sbjct: 69 KTFRDASEPIDAGSSFR--QPVSLFPGVYHSPVTNALWEARSKFFEKGEIEVENDK-----ISQDG-LVSKTPSQSRTSVEYKFSSDFVLREQYRNPWNRIRMGKLVEDLDALAGTISYKHCSKSIGITRPILLVTASVDKILLKKPIQVDADLTLVGAVTWVGRSSMEMQLEVLQPSQD-----------------ASQKSDPLALVANFTFVARDAETGQSAPINRI-----------------SPETEQEKL----LWEQAEARNKMRKVKRGEQKN--------------------KIDNQDIIRINE---LLAEGRVFVDLPALADRDSILIRDTCLQSSIICQPQQRNIHGRIFGGFLMRKAFELAFSTAYTFAGASPRFVEVDHVDFVKPVDVGNFLRMKSSVLYT-EVQNPDRPLINVEVVAHVTRPELRTSEISNKFYFTFTVCPE-------ATKNGLK---IRSVYPASEEEARRVIERMDAEHSND 486
BLAST of mRNA_P-lacustris_contig118.1373.1 vs. uniprot
Match: A0A7N0UH67_KALFE (Uncharacterized protein n=3 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UH67_KALFE) HSP 1 Score: 259 bits (663), Expect = 2.080e-74 Identity = 181/483 (37.47%), Postives = 258/483 (53.42%), Query Frame = 3
Query: 240 SVPQVSASTHFMPTKEEEVLPGAFKSPITKALWEIRRGEMDFQEKRRKAGGISPEGNLPPVPPSLSRSAIHYPFSTDSFLREDYRNPGGLIRIGRILEDLDALAGNIAFKHC-SEDPSFP--LLVTASVDRIVLRRHPELDCDITLMGRVVWTGRSSLVINMRQVKTAATMCSTSPPGMCYVGDDPWADSDS-DSCWLDANFTFVARDRETGRSRAVSPLDLGRDPLQDEAGDDSDGSPRERDPEYGWRALWRAVHSHKSRQALERNAAKKAGGRAAHALRWFGAAAEGFVELEASRLKREEEATNLVSA----GFPLLHLPALANPHAVLMSQTETSSTLICMPQHRNTANRIFGGFLMHKAYEVAFCAAFMFGGSRPRFSEIDEVVFLQPVDVGDLVKMDASILYTKEGKECGSPQACVEVLASVVRPETIDSRVSNRFNLTFSFPELVAGRDMAAQNGAPTGL-LRSVLPANATEASRIV 1661
S P + A + K + PG + SP+T ALWE R ++ + + +S +G L PS SR++I Y FS+D LRE YRNP IR+G+++EDLDALAG I+FKHC +ED + LLVTASVD+IVL++ +DCD+++ G V W GRSS+ I + ++ + DS DS L ANFTFVARD TG+S ++P+ S + RE+ LW+ +A ERN +K + ++L + E TN +SA G +PALA+ +++L+ T ++LIC PQ RNT RIFGGFLM +A+E+AF A+ F G+ PRF EID V FL+PVDVGD ++ + +L+T E ++ P VEV+A V +PE S VSN+F TF + AP GL +R+V+PA EA R++
Sbjct: 82 SPPPIDAGSSIR--KPVSLWPGMYHSPVTNALWEARSNVLEKLDDAQSEA-VS-QGKLAMKTPSSSRTSIIYKFSSDPILREQYRNPWNQIRMGKVVEDLDALAGTISFKHCCNEDRTTRPLLLVTASVDKIVLKKPISVDCDLSISGSVTWVGRSSMEIQLEVTQSTEE------------------NQDSLDSVALVANFTFVARDSRTGKSAPINPI--------------SPETEREK-------LLWQ--------EAEERNIMRKK-------------------KXXENKLGLKNEDTNRLSALLAEGRVFCDMPALADRNSILIRDTCHQNSLICQPQQRNTHGRIFGGFLMRRAFELAFATAYAFIGAAPRFMEIDHVDFLRPVDVGDFLRYKSCVLFT-ELEDSSKPLINVEVVAHVTKPELRSSEVSNKFYFTFG----------VRPDSAPNGLKIRNVVPATEEEARRVL 483 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig118.1373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig118.1373.1 >prot_P-lacustris_contig118.1373.1 ID=prot_P-lacustris_contig118.1373.1|Name=mRNA_P-lacustris_contig118.1373.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=554bp MKAAQRTWAVRSIDALRIFERMRISRGATPAFRNRYINQGIMRITSSFGLback to top mRNA from alignment at P-lacustris_contig118:177956..185876- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig118.1373.1 ID=mRNA_P-lacustris_contig118.1373.1|Name=mRNA_P-lacustris_contig118.1373.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=7921bp|location=Sequence derived from alignment at P-lacustris_contig118:177956..185876- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig118:177956..185876- >mRNA_P-lacustris_contig118.1373.1 ID=mRNA_P-lacustris_contig118.1373.1|Name=mRNA_P-lacustris_contig118.1373.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3324bp|location=Sequence derived from alignment at P-lacustris_contig118:177956..185876- (Pleurocladia lacustris SAG_25_93)back to top |