mRNA_P-lacustris_contig118.1367.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig118.1367.1 vs. uniprot
Match: D8LH72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH72_ECTSI) HSP 1 Score: 335 bits (858), Expect = 1.930e-109 Identity = 163/178 (91.57%), Postives = 171/178 (96.07%), Query Frame = 3
Query: 417 QKQKALRGLAPVPDDDRAQEIGYAASFMVLVGSDFSWEGVGQVMHYDTTIPTVIGIITAAALTIDVWKRSGCTVKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEAIRMATDPEMEETLLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAHAFLQMVRNR 950
+K+KALRGL PVPDDDRAQEIGYAASFMVLVGSDFSWEG+GQVMHYDTTIPTVIG +TAAA+ IDVWKRSGCT KMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEA+RMA DP+M+ET LNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQA AFLQMVRNR
Sbjct: 140 KKEKALRGLVPVPDDDRAQEIGYAASFMVLVGSDFSWEGIGQVMHYDTTIPTVIGAVTAAAVGIDVWKRSGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMKETFLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAFAFLQMVRNR 317
BLAST of mRNA_P-lacustris_contig118.1367.1 vs. uniprot
Match: A0A835Z355_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z355_9STRA) HSP 1 Score: 182 bits (463), Expect = 2.100e-50 Identity = 87/181 (48.07%), Postives = 126/181 (69.61%), Query Frame = 3
Query: 417 QKQKALRGLAPVPDDDRAQEIGYAASFMVLVGSDFSWEGVGQVMHYDTTIPTVIGIITAAALTIDVWKRSGCTVKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEAIRMATD-PEMEETLLNGN--GVHRILVWLLAGVAGEGLVHRQMIASDPRQAHAFLQMVRNR 950
++ +AL+ L P P DDR ++ +A +F+ +VG DF+ +G+ V+ +D T+P ++ + TA A+ +D+++ + VL G++RLF +DV RESRAEAGAFL Y+TGLPCFAF+P+ +EA+RM PE++E +G G HR LVWLL+ VAGE L HRQ+I SDPRQA FL + R R
Sbjct: 127 RRARALKDLVPTPSDDRGGDLMHAGAFLGVVGFDFAGDGLAPVLDFDATVPAILSLATAGAVALDIFQGGAERSRRVLAGLSRLFTRDVSRESRAEAGAFLAGYLTGLPCFAFKPNVLEALRMVEGMPELKEAFQSGGAGGAHRTLVWLLSAVAGEHLTHRQLIVSDPRQATTFLLLARER 307
BLAST of mRNA_P-lacustris_contig118.1367.1 vs. uniprot
Match: A0A7S1XSQ6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSQ6_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.550e-35 Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 3
Query: 417 QKQKALRGLAPVPDDDRAQEIGYAASFMVLVGSDFSWEGV------GQVMHYDTTIPTVIGIITAAALTIDVWKRSGCTVKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEAIRM--ATDPEMEETL-LNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAHAFLQMVRNR 950
++++ L GLAP+P DDR +E+ + +FM G E ++H +P + ++AAA ID+W R G T+ + +G++RLF KD ER++R E+ + + Y+ GLPCFAF+PS EA+ + A D M+E L N V+R+LVWLLA VAGE + Q++ASDPRQA AFL +VR R
Sbjct: 55 RRRRTLEGLAPLPSDDRLKELWLSLAFMGYCGVGVGLEAAIPFTDDPNLLH-SGLLPDAMLALSAAAAGIDIWGRQGKTLLELRSGLSRLFYKDSERDARCESASLVVGYLLGLPCFAFRPSVQEALALLDAEDAAMQEALPRNAATVNRLLVWLLAPVAGEDTKYSQLLASDPRQAAAFLSLVRAR 240
BLAST of mRNA_P-lacustris_contig118.1367.1 vs. uniprot
Match: A0A4D9D6H3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6H3_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.140e-32 Identity = 74/174 (42.53%), Postives = 106/174 (60.92%), Query Frame = 3
Query: 441 LAPVPDDDRAQEIGYAASFMVLVGSDFSWEGVGQVMHYDTTIPTVIGIITAAALTIDVW---KRSGCTVKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEAIRMATD-PEMEETLLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAHAFLQMVRNR 950
L+PVP D R E+ + + +VG S E VG ++H DTT +V+ A + VW +R G + + L G+NRLFL+D ER++ +A FL+AY+ GLPCF F P+ +EA+RM P ETL + G++R+LV+LLA VA E + Q++ASD RQA A LQ+ R
Sbjct: 145 LSPVPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTTAASVV---LGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAFAETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVYMGR 315
BLAST of mRNA_P-lacustris_contig118.1367.1 vs. uniprot
Match: W7U4H7_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4H7_9STRA) HSP 1 Score: 135 bits (341), Expect = 8.230e-32 Identity = 74/174 (42.53%), Postives = 106/174 (60.92%), Query Frame = 3
Query: 441 LAPVPDDDRAQEIGYAASFMVLVGSDFSWEGVGQVMHYDTTIPTVIGIITAAALTIDVW---KRSGCTVKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEAIRMATD-PEMEETLLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAHAFLQMVRNR 950
L+PVP D R E+ + + +VG S E VG ++H DTT +V+ A + VW +R G + + L G+NRLFL+D ER++ +A FL+AY+ GLPCF F P+ +EA+RM P ETL + G++R+LV+LLA VA E + Q++ASD RQA A LQ+ R
Sbjct: 276 LSPVPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTTAASVV---LGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAFAETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVFMGR 446
BLAST of mRNA_P-lacustris_contig118.1367.1 vs. uniprot
Match: A0A7S3XHA8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XHA8_HETAK) HSP 1 Score: 116 bits (290), Expect = 1.480e-27 Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 3
Query: 357 GWAEIFPR--PRAAHSAADGSFQKQKALRGLAPVPDDDRAQEIGYAASFMVLVGSDFSWEGVGQVMHYDTTIPTVIGIITAAALTIDVWKRSGCTVKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEAIRMATD 794
G ++F R PR D + + KAL+GL PVP D+R++E+ + +F+ LVG+DF W+ VG + H D+ +P ++ L D+ +G V G+NRL +KD ERE+R EA AFL Y GLPCF F+P+ +EA+R+ +
Sbjct: 2 GAGQVFGRALPRLTPLPVDPAA-RAKALKGLEPVPQDERSKEVTASLAFLGLVGADFGWQTVGALQHSDSPLPQLVLAALFGGLAYDLVSGAGQVSGSVAAGLNRLLVKDFEREARCEAAAFLVGYALGLPCFPFRPNVLEALRLVQE 148
BLAST of mRNA_P-lacustris_contig118.1367.1 vs. uniprot
Match: A0A8J2WW41_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WW41_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.110e-22 Identity = 69/178 (38.76%), Postives = 92/178 (51.69%), Query Frame = 3
Query: 423 QKALRGLAPVPDDDRAQEIGYAASFMVLVGSDFSWEGVGQVMHYDTTIPTVIGIIT-AAALTIDVWKRSGCTVKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEAIRMAT-DPEMEETLLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAHAFLQMVRNR 950
Q +L+ +P DDRA E A + + VG E + D P ++ AAA D + G K G++RL +D RE+ EA +F Y GLPCFAF P+AVEA A D ++E N V +LVWL A VA E HR+++ASDPRQA AFL ++R R
Sbjct: 136 QSSLQQCPELPTDDRATETAAALAALACVGFPALAEVAASITGGDAPGPATFTLVADAAAFGADAYLLGGEIAKKAGAGVDRLLARDARREAECEAASFDLGYRLGLPCFAFSPTAVEAANAAVVDGSVDE-----NRVRALLVWLCAPVACERRKHRKLLASDPRQAVAFLTLLRGR 308
BLAST of mRNA_P-lacustris_contig118.1367.1 vs. uniprot
Match: A0A7S2KXP3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXP3_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.250e-20 Identity = 71/224 (31.70%), Postives = 104/224 (46.43%), Query Frame = 3
Query: 417 QKQKALRGLAPVPDDDRAQEIGYAASFMVLVGSDFSWEGVGQVMHYDTTIP----TVIGIITAAAL------------------------TIDVWKRSGCTVKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEAIRMAT---------DPEME---------ETLLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAHAFLQMVRNR 950
+KQ+ L + +P DDRA EI A S + + + F + + ++ P + II+ L + + +G + G NRLF +D ER AEA AFL AY GLPCFAFQP+A+EA +A DP + + LL+ GV ++L+WL A VA E H Q++ SDPR+A +FL +RN+
Sbjct: 77 KKQQRLSNVPKIPTDDRASEISSALSVLSVAAACFLADPLAKLFGGTDAGPLPNLVLFAIISVGVLDNFYDVLSGTANLVDKAPKMPEKGNLPLGLGNGQLTSNFVAGFNRLFTEDTERACEAEAAAFLAAYSLGLPCFAFQPNALEAAILAIESSQQPATDDPNINYLPPNSTNLDPLLSNEGVIKLLIWLYAPVAYENSKHPQLLYSDPREAASFLDRIRNK 300
BLAST of mRNA_P-lacustris_contig118.1367.1 vs. uniprot
Match: B8BZ34_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ34_THAPS) HSP 1 Score: 100 bits (248), Expect = 2.690e-19 Identity = 76/248 (30.65%), Postives = 109/248 (43.95%), Query Frame = 3
Query: 375 PRPRAAHSAADGSFQKQKALRGLAPVPDDDRAQEIGYAASFMVLVGSDFSWEGVGQVMHYDTTIPT---VIGIITAAALT---IDVWKRSGCTV-KM--------------------------------VLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEAIRMATDPEMEE--------------TLLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAHAFLQMVRNR*AN 959
P+ A G+ + + L+ L VPDDDRA E+ A F +VGS G + + P V+GI T + DV G V KM V+ G+NRL + ER+ + EA A AY GLPCFAFQP+A+E + D +E L++ G+ ++L+WL+A VA E H Q+I+SDPR+A FL+ + + AN
Sbjct: 199 PQTTNAFPFGGGNKNQMERLQSLPAVPDDDRATEVSQAVIFATVVGSCLGVNVFGGLFGLEDLTPLANLVLGITTTTLVVDNFFDVIVMGGSAVAKMNEDKIPEGAKGVSAPKKEDMPLGLGTGSITGSVVKGLNRLLSVNTERDCQCEAAAVFAAYSLGLPCFAFQPNALEGAALVVDSMRKEPNNSDGFQIQGNLDNLVSDVGLLKVLIWLMAPVAMEISKHPQLISSDPREALGFLKRLDEKAAN 446
BLAST of mRNA_P-lacustris_contig118.1367.1 vs. uniprot
Match: B7GB00_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GB00_PHATC) HSP 1 Score: 98.6 bits (244), Expect = 8.420e-19 Identity = 72/233 (30.90%), Postives = 107/233 (45.92%), Query Frame = 3
Query: 363 AEIFPRPRAAHSAA---DGSFQ-KQKALRGLAPVPDDDRAQEIGYAASFMVLVGSDFSWE--GVGQVMHYDTTIPTVIGIITAAALTIDVWKRS------------------------------GCTVKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEAIRMATDPEME----ETLLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAHAFLQMV 941
A+I P P AA S DGS + + + L +A +P D+R E+ A + G F + G+ + + + + ++ A D++K S G V+ G RL D ERES EA A LTAY TGLPCFA++P+A+EA + + ++LL+ G+ R+LVWLLA VA E I S+PR+A +FL +
Sbjct: 197 ADILPLPLAATSRVKCPDGSMKTRSERLSTVADIPFDERGTEVKNAFGVTAVAGGCFFTDVAGMDDIAPFANVFLSTLIVVGALDNFYDLFKTSTSMIAKQVAKNGAADFELPEKDALPFGLGSGQLTGSVVRGFARLLTTDAERESLCEASALLTAYCTGLPCFAYRPNALEASVLVVESTKNSNGMDSLLSSAGIMRVLVWLLAPVAAESAKFPVCIVSNPREAESFLDRL 429 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig118.1367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig118.1367.1 >prot_P-lacustris_contig118.1367.1 ID=prot_P-lacustris_contig118.1367.1|Name=mRNA_P-lacustris_contig118.1367.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=160bp MALGRGMDKGDRQRLQQTVAATAGGLVKTASLERVIDGLGESEKYNAVLQback to top mRNA from alignment at P-lacustris_contig118:130212..132624- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig118.1367.1 ID=mRNA_P-lacustris_contig118.1367.1|Name=mRNA_P-lacustris_contig118.1367.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2413bp|location=Sequence derived from alignment at P-lacustris_contig118:130212..132624- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig118:130212..132624- >mRNA_P-lacustris_contig118.1367.1 ID=mRNA_P-lacustris_contig118.1367.1|Name=mRNA_P-lacustris_contig118.1367.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=960bp|location=Sequence derived from alignment at P-lacustris_contig118:130212..132624- (Pleurocladia lacustris SAG_25_93)back to top |