mRNA_P-lacustris_contig118.1354.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig118.1354.1
Unique NamemRNA_P-lacustris_contig118.1354.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: D8LH84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH84_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 1.050e-112
Identity = 175/213 (82.16%), Postives = 192/213 (90.14%), Query Frame = 1
Query:    1 MASSPSAKNRVGETHIILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQHKQ 639
            M SSP   +  G+  IILGSKS TRKMIIEEMGFVPI  RSADI+EA+IGDRTADPADLVLQLG+AKAEALLPAL+AEA+RG LS S LLTGDQVVVHDGRILEKPADE+EV+RNIASYARSPCRTVGSAVLTDI TGQQ SGVDTAEIFF E+PE+VV +LC EGTVLQCAGGLMVEHPL++PFI +IDGS+DSVMGLSKALVL LLE+HKQ
Sbjct:    1 MTSSPGHSSNQGQ--IILGSKSFTRKMIIEEMGFVPIV-RSADINEAAIGDRTADPADLVLQLGLAKAEALLPALKAEADRGELSTSWLLTGDQVVVHDGRILEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLELLEKHKQ 210          
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A836CPK2_9STRA (Inosine triphosphate pyrophosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPK2_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.550e-78
Identity = 131/200 (65.50%), Postives = 163/200 (81.50%), Query Frame = 1
Query:   34 GETHIILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDI-LTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQ 630
            G   IILGSKS+TRK+IIEEMG+  I  R+ADIDE +IGDR +DPA LVL++G AKA+ALLP+L   A R    A LLLTGDQVVVHDGR+LEKP D  EV+RNIA+YA SPCRTVGSAV+T++   G++VSGVDTA I+F  IP++VV ELC+E  +L CAGGLM+EHPL++P+I +I+G+IDSVMGLSK LV RLL++
Sbjct:    5 GRPKIILGSKSATRKLIIEEMGWEAII-RTADIDEKAIGDRASDPAQLVLEIGTAKADALLPSLADAAARH--GARLLLTGDQVVVHDGRVLEKPHDYAEVRRNIAAYALSPCRTVGSAVITELGAGGRRVSGVDTACIYFRPIPDSVVDELCKEEEILWCAGGLMIEHPLVEPYIERIEGTIDSVMGLSKPLVQRLLDE 201          
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A6V1TL15_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TL15_HETAK)

HSP 1 Score: 196 bits (499), Expect = 1.330e-59
Identity = 114/199 (57.29%), Postives = 140/199 (70.35%), Query Frame = 1
Query:   46 IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTAD----PADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQ 630
            IILGSKS TR+MI++EMG  PI  R ADIDE +IGDR+AD    P  LVL LG AKA+A+L +     + G     LLLTGDQVVVH+GRILEKP   EE ++ I  YAR+P RTVGSAVLTD+ TG+++ GVDTA I F+  P  VV  L  +   L CAGGLMVEH L+QP++  IDG++DSVMGLSK L   L+ +
Sbjct:   45 IILGSKSFTRQMIVKEMGMEPII-RVADIDEKAIGDRSADTGWDPERLVLALGNAKADAILESGLQPGDHG-----LLLTGDQVVVHEGRILEKPTSLEEARQFIEGYARAPPRTVGSAVLTDLATGRRLQGVDTATIRFAPFPPEVVDRLLADEMTLHCAGGLMVEHELVQPYLEGIDGTVDSVMGLSKRLTETLIRR 237          
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A0G4EZT5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EZT5_VITBC)

HSP 1 Score: 194 bits (492), Expect = 2.250e-58
Identity = 109/200 (54.50%), Postives = 140/200 (70.00%), Query Frame = 1
Query:   46 IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQHKQRL 645
            +I+GSKS TR+ I+ EMGF  +   SADIDE  +GDR + P++LVL++  AKA+ALL  L A  E       +LLTGDQVVV  GRI EKP D  E +  I  Y RSPC+TVGS VLTD+ T  QVSGVDTA I    IP+ ++ +L  EG +L CAGGLM+EHPL++P+I +IDG+ DSV+GLSKALV  LL   +Q++
Sbjct:   62 LIVGSKSKTRRQILTEMGF-DLHLESADIDEKQVGDRASCPSELVLEVAKAKAQALLDKL-ANTES---PYRILLTGDQVVVWKGRIREKPHDGAEAREFIEGYGRSPCQTVGSCVLTDLHTRTQVSGVDTATIHIKPIPDDIIQKLIDEGDILHCAGGLMIEHPLVEPYIERIDGAFDSVLGLSKALVDSLLIDLRQKI 256          
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A2R6XTF4_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XTF4_MARPO)

HSP 1 Score: 179 bits (454), Expect = 2.260e-53
Identity = 101/203 (49.75%), Postives = 136/203 (67.00%), Query Frame = 1
Query:   37 ETHIILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRA-EAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQHKQR 642
            +  IILGS S TR+ I++EMG +     +ADIDE+SI  R   P DLV+ L  AKA+A+L  L   E++  +   +LL+T DQVVVH+G ILEKP   EE +R I  Y+RSP RTVG+ ++T++ TG    GVDTAEI+F  IPE V+  L  EG+V   AGGL+VEHPL+ P +  + G+IDSVMGL K L L L+++  +R
Sbjct:    6 DVKIILGSSSQTRRAIMKEMG-LEFEILTADIDESSI--RREKPEDLVMALAEAKAQAILARLATKESDADSAQQTLLITADQVVVHEGNILEKPRTSEEARRFIEGYSRSPARTVGAVLVTNLSTGVSKGGVDTAEIYFHSIPEHVITTLIEEGSVFWAAGGLLVEHPLVSPLVNAMVGTIDSVMGLPKELTLSLIDEAVER 205          
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: K0SA57_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SA57_THAOC)

HSP 1 Score: 179 bits (455), Expect = 1.470e-52
Identity = 115/231 (49.78%), Postives = 150/231 (64.94%), Query Frame = 1
Query:    1 MASSPSAKNRVGETH----IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTAD-PADLVLQLGIAKAEALLPALRA---------EAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSE-IPETVVIELCRE-GTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQHKQRL 645
            + S+PS+ N +G+      ++LGS S TRK+I+ EMG +P       IDE SIGDR++D PADLVL L  AK + L+  ++          E E  A +  ++LTGDQVV H GRILEKP   EE KR +A YA  PC TVGS VLT + +G QVSGVDTA I F + I  ++V +L RE   +L CAGGLM+EHPL++  I  I G+ DSVMGLSK LVLRLL++ ++ L
Sbjct:   48 LMSAPSSSNPLGDRGFPEPLLLGSGSFTRKLILGEMG-IPYHKIVRPIDEKSIGDRSSDEPADLVLTLAKAKMDHLVAEIQGSGNCDGDLPEREGDATNEWIVLTGDQVVTHCGRILEKPESVEEAKRFVAGYAEQPCSTVGSCVLTHLPSGIQVSGVDTATIHFKQTIDGSLVDKLLREEAPILSCAGGLMIEHPLVREHIENIQGTEDSVMGLSKDLVLRLLDELRRSL 277          
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A0G4GMM6_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GMM6_9ALVE)

HSP 1 Score: 172 bits (437), Expect = 4.370e-50
Identity = 98/197 (49.75%), Postives = 132/197 (67.01%), Query Frame = 1
Query:   46 IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDR-TADPADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARS-PCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQ 630
            IILGS S+TRKMII EMG +   +  AD+DE +IGDR    P ++V  LG AKA+ ++  L+ E E      +LL+TGDQVVV +G+ILEKP   EE +  +  Y+   PC TVGS V+T++ +G+QVSG+   +  F  IP  V+  +  EG V   AGGLM+EHPL+QP+I KIDG+ID+VMG+SK LV  L+ Q
Sbjct:   23 IILGSSSATRKMIIAEMG-LRYRTEIADLDERAIGDRENQSPEEIVTLLGKAKADVIMSQLKPEEEA---EGTLLITGDQVVVCEGKILEKPGSAEEARSFLQKYSAGIPCGTVGSIVVTEVASGRQVSGIQRTQTVFGGIPSDVIERIVEEGEVFHTAGGLMIEHPLLQPYIRKIDGTIDAVMGVSKMLVRDLMLQ 215          
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A7S0X8V1_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X8V1_9CHLO)

HSP 1 Score: 174 bits (441), Expect = 7.690e-50
Identity = 104/203 (51.23%), Postives = 136/203 (67.00%), Query Frame = 1
Query:   46 IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPAL---RAEAERGALSAS-------LLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLL 624
            ++LGSKSSTR+ I+ EMG V     +ADI+E +I  R  DPADLV+ + +AKA+AL+      RA + RG   A+       LL+T DQVVVH G + EKP  E E +  IASY  SP RTVG+ V+TD+ TG++V+  D++E+ FS IP  VV  L  EG    CAGGLMVEHP I P +TK+DGS+DS+MGLSK ++ RLL
Sbjct:  120 VLLGSKSSTRQAILTEMGVV-FDVVTADINEKAI--RRDDPADLVMAIALAKADALVMRFEKERARSARGDADAAAMPQKRTLLVTADQVVVHQGVVREKPESEAEARAFIASYGESPARTVGAIVVTDLDTGRRVASGDSSEVHFSPIPPEVVDFLISEGECFHCAGGLMVEHPKIYPLVTKLDGSLDSIMGLSKQVMGRLL 319          
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A7S2ZRT4_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRT4_9RHOD)

HSP 1 Score: 170 bits (430), Expect = 2.200e-49
Identity = 98/195 (50.26%), Postives = 131/195 (67.18%), Query Frame = 1
Query:   46 IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQ 630
            +ILGS S++RK I+ EMG +      ADIDE +I  R  DPA LV  LG  KA+A+L  + +           LLTGDQVVVH+G+ILEKP DE+E +  I  Y R+P RTVGS V+T++ TG++   +DTAE++F EIP  V+ +L  EG V  CAGGL VE PL+  ++  I GS+DSVMGLSKA+V +LL++
Sbjct:   33 LILGSGSASRKEILGEMG-LEFEVLKADIDERAI--RHEDPATLVSILGNKKADAILERMNSHGVPEYEGEVFLLTGDQVVVHNGKILEKPLDEKEARTFIEGYNRAPARTVGSIVITNVKTGERFESLDTAEVYFHEIPGEVIDKLIEEGEVFYCAGGLKVEDPLVSRYVDHIAGSMDSVMGLSKAIVEQLLKK 224          
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A199UYV1_ANACO (Maf-like protein n=4 Tax=Ananas comosus TaxID=4615 RepID=A0A199UYV1_ANACO)

HSP 1 Score: 168 bits (425), Expect = 6.700e-49
Identity = 103/218 (47.25%), Postives = 141/218 (64.68%), Query Frame = 1
Query:    1 MASSPSAKNRVGETHIILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRAEA-ERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQHKQRLVR 651
            MASS S+ + V +  IILGS S++R+ I+ EMG+   T  SADIDE  I    A+  DLV+ L  AKA+A++  LR+    +G    +LL+T DQVVVH G I EKP+  EE +  I  Y+     TVGS ++T++ TG Q  G+D AEI+F +IP+ V+  L +EG+VL  AGGLMVEHPL  PF+  I G+IDSVMGL KAL  +L+ +  ++  R
Sbjct:    1 MASSSSSTSCVFK--IILGSSSASRRQILSEMGY-DFTIMSADIDEKEIRREKAE--DLVMVLAKAKADAIISRLRSNGFNQGGSEPTLLITADQVVVHGGAIREKPSSAEEAREFIKGYSGGHASTVGSVLVTNLKTGIQKGGLDIAEIYFHKIPDEVIENLIKEGSVLYVAGGLMVEHPLTSPFVEAIVGTIDSVMGLPKALTEKLIREALEKTPR 213          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH84_ECTSI1.050e-11282.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CPK2_9STRA1.550e-7865.50Inosine triphosphate pyrophosphatase-like protein ... [more]
A0A6V1TL15_HETAK1.330e-5957.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4EZT5_VITBC2.250e-5854.50Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A2R6XTF4_MARPO2.260e-5349.75Uncharacterized protein n=3 Tax=Marchantia polymor... [more]
K0SA57_THAOC1.470e-5249.78Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A0G4GMM6_9ALVE4.370e-5049.75Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S0X8V1_9CHLO7.690e-5051.23Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A7S2ZRT4_9RHOD2.200e-4950.26Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A199UYV1_ANACO6.700e-4947.25Maf-like protein n=4 Tax=Ananas comosus TaxID=4615... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig118contigP-lacustris_contig118:20237..24009 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.5
Seed ortholog evalue6e-88
Seed eggNOG ortholog2880.D8LH84
Preferred nameMAF
KEGG koko:K06287
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009536,GO:0009987,GO:0016119,GO:0016120,GO:0016853,GO:0016859,GO:0042214,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046246,GO:0071704,GO:0090471,GO:1901576
EggNOG free text desc.nucleoside-triphosphate diphosphatase activity
EggNOG OGsCOG0424@1,KOG1509@2759
Ec32 ortholog descriptionInosine triphosphate pyrophosphatase-like
Ec32 orthologEc-24_000950.1
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons5
Model size657
Cds size657
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig118.1354.1prot_P-lacustris_contig118.1354.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig118 20237..24009 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815491.221256-CDS-P-lacustris_contig118:20236..204341622815491.221256-CDS-P-lacustris_contig118:20236..20434Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig118 20237..20434 -
1693493570.688903-CDS-P-lacustris_contig118:20236..204341693493570.688903-CDS-P-lacustris_contig118:20236..20434Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig118 20237..20434 -
1622815491.236337-CDS-P-lacustris_contig118:20761..208601622815491.236337-CDS-P-lacustris_contig118:20761..20860Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig118 20762..20860 -
1693493570.709281-CDS-P-lacustris_contig118:20761..208601693493570.709281-CDS-P-lacustris_contig118:20761..20860Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig118 20762..20860 -
1622815491.2539825-CDS-P-lacustris_contig118:21381..214581622815491.2539825-CDS-P-lacustris_contig118:21381..21458Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig118 21382..21458 -
1693493570.7205427-CDS-P-lacustris_contig118:21381..214581693493570.7205427-CDS-P-lacustris_contig118:21381..21458Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig118 21382..21458 -
1622815491.267457-CDS-P-lacustris_contig118:21659..218261622815491.267457-CDS-P-lacustris_contig118:21659..21826Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig118 21660..21826 -
1693493570.7313523-CDS-P-lacustris_contig118:21659..218261693493570.7313523-CDS-P-lacustris_contig118:21659..21826Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig118 21660..21826 -
1622815491.2789583-CDS-P-lacustris_contig118:23893..240091622815491.2789583-CDS-P-lacustris_contig118:23893..24009Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig118 23894..24009 -
1693493570.739673-CDS-P-lacustris_contig118:23893..240091693493570.739673-CDS-P-lacustris_contig118:23893..24009Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig118 23894..24009 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig118.1354.1

>prot_P-lacustris_contig118.1354.1 ID=prot_P-lacustris_contig118.1354.1|Name=mRNA_P-lacustris_contig118.1354.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=219bp
MASSPSAKNRVGETHIILGSKSSTRKMIIEEMGFVPITSRSADIDEASIG
DRTADPADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDG
RILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIF
FSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLS
KALVLRLLEQHKQRLVRP*
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mRNA from alignment at P-lacustris_contig118:20237..24009-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig118.1354.1 ID=mRNA_P-lacustris_contig118.1354.1|Name=mRNA_P-lacustris_contig118.1354.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=3773bp|location=Sequence derived from alignment at P-lacustris_contig118:20237..24009- (Pleurocladia lacustris SAG_25_93)
ATGGCGTCGTCCCCCTCGGCTAAAAACCGCGTTGGCGAGACCCACATCAT TTTGGGCTCAAAATCTAGCACGAGGAAGATGATCATCGAGGAGATGGGTT TTGTCCCTATTACAAGGTGGGTCGTGTGTTGCGCTAACCACTGCTGTATT GTACTCGGTTGTTGTTTTGTTGCGGGTCGGGGATTGAAATGGAAATAATG CGGTATTCTTGGCGGTATGTGTAGTAGTCTTTCGTCATGAATACTCGGAG TAGCCTACTGCTGCTGTGCGTGCATAATAAATTAGCCGTTTGAACCCTGT CCACTCCTCTACTCCTCTGGGTCTCCTCTACTCCTCTAGGTCTCGTCGAA GGCAAAGAAATGTGTTTGATGGTCACGAGCAATGATTCGTACCCCCACAC TATATCTTTTGTTTGATAGCACAGCAGTAGTTTACCTCTGTGCTACTAGT CAGCGGCTGACTACGTAGTAGCACAGAAGTGTAACAAATTACTTGTGCAA AAACAAGTATCTACACGAAGCCCCACCACGTGCTAGAGGTGCTAGAAGCA GTTGGACTATTCCTCACGTGGCTTTACAGCACGTTTTACAGCTTGCTAGA CAAATCTGTGCAGGGGTCGCTCTGTGCTGTGGAGATGAAGCAGCCAGGCT TCTGGGTTGATTGCGTTTGAATTCCTGTGTTGTATCCACATACGTAACAC ACACAATACCGAGACAAAAACAAGATAATAGAAGACAAGAAGTGAACACG AGGGCTTCAGCCAAGCCCGAAATTCTATCCTACGGCCTATAGCCGGTTAC ACACGCCGAATCACACAAAGAAACCAATTTTGCCCGGAATGTATGGCAGT CTCGCCCATGTCTTTGATTCCCATACGCATCCATCGTAACTTTGCCACGA ATACCCCGTATATCTAACACAGCTTATAGTCCAACCTTTCGTTAAACAGC AGTGAAGGGTTAGAGAAGGGTACGACAAGGAAGTAAAGGGTGAAGTAGAG TCCATCGCTTCAGCTCGGGAGCTTCCACACACAACGCAATAGCTCTCAAA CCATGTCCCAAGGAACTGCGCGCCCTTCCGAACCGGGGATTGCTCATCGT CGTGTTGTGGAATGAAGTGGGAGATCTCTCTCCTTGGTGATTAACGACGT GGTCGCTTGAATGAATGATGCGTTCAAGACGTGCATGACACACAAAGTGG ATAATGTGTACATGTAGAAGCCAACCAGTTGGAGTTTCTTCGGGCGTGCA CGTCCGTTGCCTGGGCATGACGTTCTGACGCCATTGTTGCTGGTTCAAAC GGATCGTGTGTTGTTGCATTAAATTTGTGTTACATTAAAAACCGAACCGT TCTCTGCTCAGTACCTTCCATTGTCCGTACATGTCTAACTGACACGGACA AAGCTGACTACCCAAACAGGTGTGCCAAAAGATAGAATAAAAGTAGGGGA CCCAGACAGTCAACATAATCGCGATAGAACCCTAACAAAAGCAAAACTGA GGTGAGACCCCAGAAAGCCCGATGTCGCTGGCGCCATGGCGCCATGCGTG ACTGGGGGGGGGGGGTAGAGCCCATCGCTCCCACCCGACACGCGAAGCCA AGCAAAAAAATAAGTAGAGATAAACATAGCAAACCGGGAATAACCAAAAA TCAAAGATCGTCGACCGAATAATAAAGCTCGTACTTCCATCTTTGTGCCT CTACTAGGCCCGGGCGTATTCAACGCCGGGTTTGCACCGGCCGTGCCCTT CCCACATACACTTTGCAATATGTGGGGAGGGCTCCAACACAGGGCCCAAA CGATATCTCCGTGTTCCATCTCCCTTCCGAGACAAGATGTTACCCTCTCC TCCTGTGTCCATGCCTGGGTCATACCCGGCTAGTTACACCCCACATCGTA CGCTGGATAAAAGCTTGCCACGGCCCAGACGCGTCGAAATAAGAAGGAAA ATACGTAAATCAGACATACACAGGCATGGGCCGACGCAATAAATAAATAA ATGTGCCACTCGAAAAATGCGCGTCCCGTCGAAGGTGCTGCGTTGAGTAG ACTAGATGAGTCAAAATATATTGCATAGGGTGCGCATATGAGCGCTAGTG CGAAGAGGATTTCAGACACACCCCGCAGCAACGAAACGGTGAAAGCTTAA GCTATGGCTGAACGTTGCTTGACGAAATGCCAGCAGGTCTGCCGACATCG ACGAGGCATCGATTGGCGACCGCACTGCAGATCCAGCTGATCTAGTGCTG CAGCTGGGGATCGCTAAAGCGGAGGCACTGCTCCCTGCACTAAGAGCTGA GGCTGAACGCGGAGCGCTAAGTGCCTCATTGCTTCTGACGGGAGACCAAG GTATCTATCTCACCGTTCTGCCCCAAAAGAGCATTTCATCTGCTTCGGCC TAACGCAGCGGCAGAGAAGGTACAATAGTCGAATCTTACTGGTGTCTGGT ACATGGCTGCGATTCGAAGCGAAGCATCTCGATCAGCCCGTGCTTTATCG TGCCCTTGCGATGAAAATGTATGCCGATTCTTCGCCCCAAACGTTTGGCA GTTGTCGTTCATGATGGCCGGATCCTAGAAAAGCCTGCAGACGAAGAGGA AGTGAAGAGAAATATCGCCAGTTATGCGGTGAGTTGTTATCGGGCCACCT TTCAAGGTAGGTGGTGATCCCCTACGTCGTGCACTCACAAATGATGCACA ACTGGCGTGTGTGGATGATCTCCGAGGAAAAACCGTAAGATACAGGTGAA CGATCCCCATGGCACTTACCCGGTCCCAATGCCCGGGTGACACGAATGAA CCGCACAATCCGGGGCAGCTGCGTCTGGGTGTAGCCTTGGCAACCCAGCT TAAACGATTGCCCACAGTGTCTAGTGCTGAAGCGGGGACCCAACGCGGCG CAATGCGTTTGGGTGGCTGGTTGCAGCAATGGCACTCCCTTTCAAGGACA CGAAGTATTACAACATTGGCCGATCATACTTCGACAGAAGAGGGTGCACG TGAAGGTGTGCCAACAGTGCGATTCCGATACCCCATCCATTCTTTGCTCC CATCACGAAACCCGAGTGCCTGCTACACGTACCCGATCCCAACTTTTGCT TGATGTTGCTCGCGTTTAAAACGCTGTCGACTGCTTTGCAAACCTGCAGC GATCGCCATGTCGGACGGTAGGTTCTGCGGTGTTGACGGACATCTTGACG GGTCAACAGGTGTCGGGGGTTGATACGGCCGAAATATTTTTCAGCGAGGT AAGATGGATGGATGGATGGATGCTGGTTTGGCGTCATCCCGACGTCCAGT ATGTCCCACGCTATCTCGTTCATGGATCAGATGGTCGTTAGGTGATCCCT GTCGGGAGTGTGATTGCCGAGGATTCATCATAGGGCGAGGTGCGCAATCT GTACACCGGCGTTTTGGCAACAAAACCACCCCACTGCTTTCGCCCCTTCG ACACACCTATCCATCAAGCCATGGAGTTTTGGTCCAGCCCATTTTCAACG CATGATTTCTACTGGCTGACCGCTGCTCTACCGATTTGTTTTCTGTTTCA TCTGCCGTGACCGTCGTCGTTACAGATCCCGGAGACCGTAGTGATCGAGC TGTGTAGGGAGGGCACAGTGCTACAATGTGCTGGTGGTTTGATGGTTGAA CACCCGTTGATCCAGCCCTTCATCACCAAAATTGATGGCTCCATCGATTC CGTCATGGGCTTGTCAAAGGCGTTAGTACTCCGGTTGCTCGAGCAACACA AGCAGAGATTGGTCCGTCCATAG
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Coding sequence (CDS) from alignment at P-lacustris_contig118:20237..24009-

>mRNA_P-lacustris_contig118.1354.1 ID=mRNA_P-lacustris_contig118.1354.1|Name=mRNA_P-lacustris_contig118.1354.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1314bp|location=Sequence derived from alignment at P-lacustris_contig118:20237..24009- (Pleurocladia lacustris SAG_25_93)
ATGGCGTCGTCCCCCTCGGCTAAAAACCGCGTTGGCGAGACCCACATCAT
TTTGGGCTCAAAATCTAGCACGAGGAAGATGATCATCGAGGAGATGGGTT
TTGTCCCTATTACAAGATGGCGTCGTCCCCCTCGGCTAAAAACCGCGTTG
GCGAGACCCACATCATTTTGGGCTCAAAATCTAGCACGAGGAAGATGATC
ATCGAGGAGATGGGTTTTGTCCCTATTACAAGCAGGTCTGCCGACATCGA
CGAGGCATCGATTGGCGACCGCACTGCAGATCCAGCTGATCTAGTGCTGC
AGCTGGGGATCGCTAAAGCGGAGGCACTGCTCCCTGCACTAAGAGCTGAG
GCTGAACGCGGAGCGCTAAGTGCCTCATTGCTTCTGACGGGAGACCAAGC
AGGTCTGCCGACATCGACGAGGCATCGATTGGCGACCGCACTGCAGATCC
AGCTGATCTAGTGCTGCAGCTGGGGATCGCTAAAGCGGAGGCACTGCTCC
CTGCACTAAGAGCTGAGGCTGAACGCGGAGCGCTAAGTGCCTCATTGCTT
CTGACGGGAGACCAAGTTGTCGTTCATGATGGCCGGATCCTAGAAAAGCC
TGCAGACGAAGAGGAAGTGAAGAGAAATATCGCCAGTTATGCGTTGTCGT
TCATGATGGCCGGATCCTAGAAAAGCCTGCAGACGAAGAGGAAGTGAAGA
GAAATATCGCCAGTTATGCGCGATCGCCATGTCGGACGGTAGGTTCTGCG
GTGTTGACGGACATCTTGACGGGTCAACAGGTGTCGGGGGTTGATACGGC
CGAAATATTTTTCAGCGAGCGATCGCCATGTCGGACGGTAGGTTCTGCGG
TGTTGACGGACATCTTGACGGGTCAACAGGTGTCGGGGGTTGATACGGCC
GAAATATTTTTCAGCGAGATCCCGGAGACCGTAGTGATCGAGCTGTGTAG
GGAGGGCACAGTGCTACAATGTGCTGGTGGTTTGATGGTTGAACACCCGT
TGATCCAGCCCTTCATCACCAAAATTGATGGCTCCATCGATTCCGTCATG
GGCTTGTCAAAGGCGTTAGTACTCCGGTTGCTCGAGCAACACAAGCAGAG
ATTGGTCCGTCCATAGATCCCGGAGACCGTAGTGATCGAGCTGTGTAGGG
AGGGCACAGTGCTACAATGTGCTGGTGGTTTGATGGTTGAACACCCGTTG
ATCCAGCCCTTCATCACCAAAATTGATGGCTCCATCGATTCCGTCATGGG
CTTGTCAAAGGCGTTAGTACTCCGGTTGCTCGAGCAACACAAGCAGAGAT
TGGTCCGTCCATAG
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