mRNA_P-lacustris_contig118.1354.1 (mRNA) Pleurocladia lacustris SAG_25_93
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: D8LH84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH84_ECTSI) HSP 1 Score: 330 bits (845), Expect = 1.050e-112 Identity = 175/213 (82.16%), Postives = 192/213 (90.14%), Query Frame = 1
Query: 1 MASSPSAKNRVGETHIILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQHKQ 639
M SSP + G+ IILGSKS TRKMIIEEMGFVPI RSADI+EA+IGDRTADPADLVLQLG+AKAEALLPAL+AEA+RG LS S LLTGDQVVVHDGRILEKPADE+EV+RNIASYARSPCRTVGSAVLTDI TGQQ SGVDTAEIFF E+PE+VV +LC EGTVLQCAGGLMVEHPL++PFI +IDGS+DSVMGLSKALVL LLE+HKQ
Sbjct: 1 MTSSPGHSSNQGQ--IILGSKSFTRKMIIEEMGFVPIV-RSADINEAAIGDRTADPADLVLQLGLAKAEALLPALKAEADRGELSTSWLLTGDQVVVHDGRILEKPADEDEVRRNIASYARSPCRTVGSAVLTDISTGQQFSGVDTAEIFFKEVPESVVTKLCGEGTVLQCAGGLMVEHPLVEPFIARIDGSMDSVMGLSKALVLELLEKHKQ 210
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A836CPK2_9STRA (Inosine triphosphate pyrophosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPK2_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.550e-78 Identity = 131/200 (65.50%), Postives = 163/200 (81.50%), Query Frame = 1
Query: 34 GETHIILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDI-LTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQ 630
G IILGSKS+TRK+IIEEMG+ I R+ADIDE +IGDR +DPA LVL++G AKA+ALLP+L A R A LLLTGDQVVVHDGR+LEKP D EV+RNIA+YA SPCRTVGSAV+T++ G++VSGVDTA I+F IP++VV ELC+E +L CAGGLM+EHPL++P+I +I+G+IDSVMGLSK LV RLL++
Sbjct: 5 GRPKIILGSKSATRKLIIEEMGWEAII-RTADIDEKAIGDRASDPAQLVLEIGTAKADALLPSLADAAARH--GARLLLTGDQVVVHDGRVLEKPHDYAEVRRNIAAYALSPCRTVGSAVITELGAGGRRVSGVDTACIYFRPIPDSVVDELCKEEEILWCAGGLMIEHPLVEPYIERIEGTIDSVMGLSKPLVQRLLDE 201
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A6V1TL15_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TL15_HETAK) HSP 1 Score: 196 bits (499), Expect = 1.330e-59 Identity = 114/199 (57.29%), Postives = 140/199 (70.35%), Query Frame = 1
Query: 46 IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTAD----PADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQ 630
IILGSKS TR+MI++EMG PI R ADIDE +IGDR+AD P LVL LG AKA+A+L + + G LLLTGDQVVVH+GRILEKP EE ++ I YAR+P RTVGSAVLTD+ TG+++ GVDTA I F+ P VV L + L CAGGLMVEH L+QP++ IDG++DSVMGLSK L L+ +
Sbjct: 45 IILGSKSFTRQMIVKEMGMEPII-RVADIDEKAIGDRSADTGWDPERLVLALGNAKADAILESGLQPGDHG-----LLLTGDQVVVHEGRILEKPTSLEEARQFIEGYARAPPRTVGSAVLTDLATGRRLQGVDTATIRFAPFPPEVVDRLLADEMTLHCAGGLMVEHELVQPYLEGIDGTVDSVMGLSKRLTETLIRR 237
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A0G4EZT5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EZT5_VITBC) HSP 1 Score: 194 bits (492), Expect = 2.250e-58 Identity = 109/200 (54.50%), Postives = 140/200 (70.00%), Query Frame = 1
Query: 46 IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQHKQRL 645
+I+GSKS TR+ I+ EMGF + SADIDE +GDR + P++LVL++ AKA+ALL L A E +LLTGDQVVV GRI EKP D E + I Y RSPC+TVGS VLTD+ T QVSGVDTA I IP+ ++ +L EG +L CAGGLM+EHPL++P+I +IDG+ DSV+GLSKALV LL +Q++
Sbjct: 62 LIVGSKSKTRRQILTEMGF-DLHLESADIDEKQVGDRASCPSELVLEVAKAKAQALLDKL-ANTES---PYRILLTGDQVVVWKGRIREKPHDGAEAREFIEGYGRSPCQTVGSCVLTDLHTRTQVSGVDTATIHIKPIPDDIIQKLIDEGDILHCAGGLMIEHPLVEPYIERIDGAFDSVLGLSKALVDSLLIDLRQKI 256
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A2R6XTF4_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XTF4_MARPO) HSP 1 Score: 179 bits (454), Expect = 2.260e-53 Identity = 101/203 (49.75%), Postives = 136/203 (67.00%), Query Frame = 1
Query: 37 ETHIILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRA-EAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQHKQR 642
+ IILGS S TR+ I++EMG + +ADIDE+SI R P DLV+ L AKA+A+L L E++ + +LL+T DQVVVH+G ILEKP EE +R I Y+RSP RTVG+ ++T++ TG GVDTAEI+F IPE V+ L EG+V AGGL+VEHPL+ P + + G+IDSVMGL K L L L+++ +R
Sbjct: 6 DVKIILGSSSQTRRAIMKEMG-LEFEILTADIDESSI--RREKPEDLVMALAEAKAQAILARLATKESDADSAQQTLLITADQVVVHEGNILEKPRTSEEARRFIEGYSRSPARTVGAVLVTNLSTGVSKGGVDTAEIYFHSIPEHVITTLIEEGSVFWAAGGLLVEHPLVSPLVNAMVGTIDSVMGLPKELTLSLIDEAVER 205
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: K0SA57_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SA57_THAOC) HSP 1 Score: 179 bits (455), Expect = 1.470e-52 Identity = 115/231 (49.78%), Postives = 150/231 (64.94%), Query Frame = 1
Query: 1 MASSPSAKNRVGETH----IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTAD-PADLVLQLGIAKAEALLPALRA---------EAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSE-IPETVVIELCRE-GTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQHKQRL 645
+ S+PS+ N +G+ ++LGS S TRK+I+ EMG +P IDE SIGDR++D PADLVL L AK + L+ ++ E E A + ++LTGDQVV H GRILEKP EE KR +A YA PC TVGS VLT + +G QVSGVDTA I F + I ++V +L RE +L CAGGLM+EHPL++ I I G+ DSVMGLSK LVLRLL++ ++ L
Sbjct: 48 LMSAPSSSNPLGDRGFPEPLLLGSGSFTRKLILGEMG-IPYHKIVRPIDEKSIGDRSSDEPADLVLTLAKAKMDHLVAEIQGSGNCDGDLPEREGDATNEWIVLTGDQVVTHCGRILEKPESVEEAKRFVAGYAEQPCSTVGSCVLTHLPSGIQVSGVDTATIHFKQTIDGSLVDKLLREEAPILSCAGGLMIEHPLVREHIENIQGTEDSVMGLSKDLVLRLLDELRRSL 277
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A0G4GMM6_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GMM6_9ALVE) HSP 1 Score: 172 bits (437), Expect = 4.370e-50 Identity = 98/197 (49.75%), Postives = 132/197 (67.01%), Query Frame = 1
Query: 46 IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDR-TADPADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARS-PCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQ 630
IILGS S+TRKMII EMG + + AD+DE +IGDR P ++V LG AKA+ ++ L+ E E +LL+TGDQVVV +G+ILEKP EE + + Y+ PC TVGS V+T++ +G+QVSG+ + F IP V+ + EG V AGGLM+EHPL+QP+I KIDG+ID+VMG+SK LV L+ Q
Sbjct: 23 IILGSSSATRKMIIAEMG-LRYRTEIADLDERAIGDRENQSPEEIVTLLGKAKADVIMSQLKPEEEA---EGTLLITGDQVVVCEGKILEKPGSAEEARSFLQKYSAGIPCGTVGSIVVTEVASGRQVSGIQRTQTVFGGIPSDVIERIVEEGEVFHTAGGLMIEHPLLQPYIRKIDGTIDAVMGVSKMLVRDLMLQ 215
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A7S0X8V1_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X8V1_9CHLO) HSP 1 Score: 174 bits (441), Expect = 7.690e-50 Identity = 104/203 (51.23%), Postives = 136/203 (67.00%), Query Frame = 1
Query: 46 IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPAL---RAEAERGALSAS-------LLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLL 624
++LGSKSSTR+ I+ EMG V +ADI+E +I R DPADLV+ + +AKA+AL+ RA + RG A+ LL+T DQVVVH G + EKP E E + IASY SP RTVG+ V+TD+ TG++V+ D++E+ FS IP VV L EG CAGGLMVEHP I P +TK+DGS+DS+MGLSK ++ RLL
Sbjct: 120 VLLGSKSSTRQAILTEMGVV-FDVVTADINEKAI--RRDDPADLVMAIALAKADALVMRFEKERARSARGDADAAAMPQKRTLLVTADQVVVHQGVVREKPESEAEARAFIASYGESPARTVGAIVVTDLDTGRRVASGDSSEVHFSPIPPEVVDFLISEGECFHCAGGLMVEHPKIYPLVTKLDGSLDSIMGLSKQVMGRLL 319
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A7S2ZRT4_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRT4_9RHOD) HSP 1 Score: 170 bits (430), Expect = 2.200e-49 Identity = 98/195 (50.26%), Postives = 131/195 (67.18%), Query Frame = 1
Query: 46 IILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRAEAERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQ 630
+ILGS S++RK I+ EMG + ADIDE +I R DPA LV LG KA+A+L + + LLTGDQVVVH+G+ILEKP DE+E + I Y R+P RTVGS V+T++ TG++ +DTAE++F EIP V+ +L EG V CAGGL VE PL+ ++ I GS+DSVMGLSKA+V +LL++
Sbjct: 33 LILGSGSASRKEILGEMG-LEFEVLKADIDERAI--RHEDPATLVSILGNKKADAILERMNSHGVPEYEGEVFLLTGDQVVVHNGKILEKPLDEKEARTFIEGYNRAPARTVGSIVITNVKTGERFESLDTAEVYFHEIPGEVIDKLIEEGEVFYCAGGLKVEDPLVSRYVDHIAGSMDSVMGLSKAIVEQLLKK 224
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Match: A0A199UYV1_ANACO (Maf-like protein n=4 Tax=Ananas comosus TaxID=4615 RepID=A0A199UYV1_ANACO) HSP 1 Score: 168 bits (425), Expect = 6.700e-49 Identity = 103/218 (47.25%), Postives = 141/218 (64.68%), Query Frame = 1
Query: 1 MASSPSAKNRVGETHIILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGDRTADPADLVLQLGIAKAEALLPALRAEA-ERGALSASLLLTGDQVVVHDGRILEKPADEEEVKRNIASYARSPCRTVGSAVLTDILTGQQVSGVDTAEIFFSEIPETVVIELCREGTVLQCAGGLMVEHPLIQPFITKIDGSIDSVMGLSKALVLRLLEQHKQRLVR 651
MASS S+ + V + IILGS S++R+ I+ EMG+ T SADIDE I A+ DLV+ L AKA+A++ LR+ +G +LL+T DQVVVH G I EKP+ EE + I Y+ TVGS ++T++ TG Q G+D AEI+F +IP+ V+ L +EG+VL AGGLMVEHPL PF+ I G+IDSVMGL KAL +L+ + ++ R
Sbjct: 1 MASSSSSTSCVFK--IILGSSSASRRQILSEMGY-DFTIMSADIDEKEIRREKAE--DLVMVLAKAKADAIISRLRSNGFNQGGSEPTLLITADQVVVHGGAIREKPSSAEEAREFIKGYSGGHASTVGSVLVTNLKTGIQKGGLDIAEIYFHKIPDEVIENLIKEGSVLYVAGGLMVEHPLTSPFVEAIVGTIDSVMGLPKALTEKLIREALEKTPR 213 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig118.1354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig118.1354.1 >prot_P-lacustris_contig118.1354.1 ID=prot_P-lacustris_contig118.1354.1|Name=mRNA_P-lacustris_contig118.1354.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=219bp MASSPSAKNRVGETHIILGSKSSTRKMIIEEMGFVPITSRSADIDEASIGback to top mRNA from alignment at P-lacustris_contig118:20237..24009- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig118.1354.1 ID=mRNA_P-lacustris_contig118.1354.1|Name=mRNA_P-lacustris_contig118.1354.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=3773bp|location=Sequence derived from alignment at P-lacustris_contig118:20237..24009- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig118:20237..24009- >mRNA_P-lacustris_contig118.1354.1 ID=mRNA_P-lacustris_contig118.1354.1|Name=mRNA_P-lacustris_contig118.1354.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1314bp|location=Sequence derived from alignment at P-lacustris_contig118:20237..24009- (Pleurocladia lacustris SAG_25_93)back to top |