mRNA_P-lacustris_contig1178.1345.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1178.1345.1
Unique NamemRNA_P-lacustris_contig1178.1345.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig1178.1345.1 vs. uniprot
Match: UPI0000161E54 (EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E54)

HSP 1 Score: 272 bits (695), Expect = 1.120e-77
Identity = 164/401 (40.90%), Postives = 235/401 (58.60%), Query Frame = 3
Query:  687 TANMRDLVSKMNPDFDPSVIIEAARREVGDFHETKEEDDKLISEKVILHLYNLFEKYVGDSRKTYERVVQDAAMKLFPGKEH--QRERSDLIKQGWSSDFT--PPKHASILPICSSKAVFIRIESRGLREWGIKNSNDAWWFEEVLQPFSEEANIKCLRNKENVARGTSLEKFVKALENKENKVCPWLVGTSFLTDGVQLKIHLVTLASSHPEFSGSSALDEKGYSKLPRADVGLGTLISRRRGVYNIGTVTPCTPGEIPDETIIMSADPGQAKIINVSRAEARVWKENDPGKILNSSDFVSDVEYREKIRAKDAEEYEVRRRRDRKI------TGKQSRTWETL*RKRLVSKRFWSTVSLGQRTVLACSRKF*GCREREGGFSRFRAVQSTLSMVADKYV 1859
            T  +R +   ++P  D ++II+ A +E  +F +    D K  S + I HL  +F  YV +SR+ YE  V  + +   PGK+   +++R + +K     +FT  PPK  ++LPICS+ AVFI I+ + L  WG+ +SNDAWW+++VL+PFS+EAN+KCL NKEN    +S   ++ +L       CPW++G SFLTDGVQ+K+ L TL      FSGSS L+EKGY+KLPRADV L +L+   RGVYNI ++   T   I ++ ++MSADPGQAK+INVS A AR W + DPG IL +S  V   +YR    A  ++EYE  RR+ +         G + +    L       +R+     +  R  L   RKF         F RFRA Q TL+++ADKY+
Sbjct:  252 TQKLRTMSRAIDPGTDTNIIIDFAWQEK-EFSDRDRGDGK--SAETIKHLNWMFNTYVAESRRMYEEAVSRSHL-FAPGKDKACRKKRDEFMKHELGEEFTYAPPKDTAVLPICSTGAVFIYIDMKTLGSWGLLHSNDAWWYKDVLRPFSKEANVKCLVNKENARYASSEHGYLSSLLESGPDKCPWMIGESFLTDGVQIKLLLKTLEHGRKAFSGSSELNEKGYNKLPRADVQLESLLGEGRGVYNISSLLKST--SIREDVVVMSADPGQAKVINVSSATARTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKGQPYGVAIDRLGNEKKRTSCLATFIQYCRRWCVNGPVLFRETLQTGRKF-------MRFDRFRATQKTLALIADKYM 639          
BLAST of mRNA_P-lacustris_contig1178.1345.1 vs. uniprot
Match: UPI0000161E53 (EsV-1-178/222 paralog 1 n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E53)

HSP 1 Score: 264 bits (675), Expect = 1.590e-76
Identity = 161/400 (40.25%), Postives = 231/400 (57.75%), Query Frame = 3
Query:  687 TANMRDLVSKMNPDFDPSVIIEAARREVGDFHETKEEDDKLISEKVILHLYNLFEKYVGDSRKTYERVVQDAAMKLFPGKEH--QRERSDLIKQGWSSDFT--PPKHASILPICSSKAVFIRIESRGLREWGIKNSNDAWWFEEVLQPFSEEANIKCLRNKENVARGTSLEKFVKALENKENKVCPWLVGTSFLTDGVQLKIHLVTLASSHPEFSGSSALDEKGYSKLPRADVGLGTLISRRRGVYNIGTVTPCTPGEIPDETIIMSADPGQAKIINVSRAEARVWKENDPGKILNSSDFVSDVEYREKIRAKDAEEYEVRRRRDRKI------TGKQSRTWETL*RKRLVSKRFWSTVSLGQRTVLACSRKF*GCREREGGFSRFRAVQSTLSMVADKY 1856
            T  +R +   ++P  D ++II+ A +E   F +    D K  S + I HL  +F  YV +SR+ YE  V  + +   PGK+   +++R + +K     +FT  PPK  ++LPICS+ AVFI I+ + L  WG+ +SNDAWW+++VL+PFS+EAN+KCL NKEN    +S   ++ +L       CPW++G SFLTDGVQ+K+ L TL      FSGSS L+E+GY+KLPRADV L +L+   RGVYNI ++   T   I ++ ++MSADPGQAK+INVS A AR W + DPG IL +S  V   +YR    A  ++EYE  RR+ +         G + +    L       +R+     +  R  L   RKF         F RFRA Q TL+++A  Y
Sbjct:  129 TQKLRTMSRAIDPGTDTNIIIDFAWQEKK-FSDRDRGDGK--SAETIKHLNWMFNTYVAESRRMYEEAVSRSHL-FAPGKDKACRKKRDEFVKHELGEEFTYAPPKDTAVLPICSTGAVFIYIDMKTLGSWGLLHSNDAWWYKDVLRPFSKEANVKCLVNKENARYASSEHGYLSSLLESGPDKCPWMIGESFLTDGVQIKLLLKTLEHGRKAFSGSSELNEEGYNKLPRADVQLESLLGEGRGVYNISSLLKST--SIREDVVVMSADPGQAKVINVSSAMARTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKGQPYGVAIDRLGNEKKRTSCLATFIQYCRRWCVNGPVLFRETLQTGRKF-------MRFDRFRATQKTLALIAGPY 515          
BLAST of mRNA_P-lacustris_contig1178.1345.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 3.720e-75
Identity = 162/385 (42.08%), Postives = 227/385 (58.96%), Query Frame = 3
Query:  732 DPSVIIEAARREVGDFHETKEEDDKLISEKVILHLYNLFEKYVGDSRKTYERVVQDAAMKLFPGKEH--QRERSDLIKQGWSSDFT--PPKHASILPICSSKAVFIRIESRGLREWGIKNSNDAWWFEEVLQPFSEEANIKCLRNKENVARGTSLEKFVKALENKENKVCPWLVGTSFLTDGVQLKIHLVTLASSHPEFSGSSALDEKGYSKLPRADVGLGTLISRRRGVYNIGTVTPCTPGEIPDETIIMSADPGQAKIINVSRAEARVWKENDPGKILNSSDFVSDVEYREKIRAKDAEEYEVRRRRDR-------KITGKQSRTWETL*RKRLVSKRFWSTVSLGQRTVLACSRKF*GCREREGGFSRFRAVQSTLSMVADK 1853
            D  +II+ ARRE  DF +    D K+   K I HLY +F  YV +SR+ YE  V  A +   PG++   +++R + +K      FT  PPK  ++LPICS+ AVFI I+ + L+ WG+ +SNDAWW+++VL+PFS+EANIKCL NKEN    +S   ++ +L       CPW++G SFLTDGVQ+K+ LVTL      FSGSS L+E GY+KLPRA+  L +L+   RGVYNI ++   T   I ++ ++MSADPGQAK+INVS A A  W + DPG IL +S  V   +YR    A  ++EYE  RR+D+       +++ ++ RT   L       K + +         L   RKF         F RFRA Q TL+ +AD+
Sbjct:  370 DTDIIIDFARREK-DFSDRDCGDGKIA--KTIKHLYWMFNTYVAESRRMYEEAVSRAHL-FAPGEDKACRKKRDEFVKHELGEKFTYAPPKDTAVLPICSTGAVFIHIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLEST--SIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTCVFGDDYRRDTLASRSDEYETFRRKDQPYGVAIDRLSNEKKRT-SCLATFIQYCKSWCANGPALFLETLQTGRKF-------MRFDRFRATQKTLAKIADR 740          
BLAST of mRNA_P-lacustris_contig1178.1345.1 vs. uniprot
Match: Q6XLT6_9PHYC (FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT6_9PHYC)

HSP 1 Score: 258 bits (658), Expect = 2.550e-72
Identity = 157/398 (39.45%), Postives = 230/398 (57.79%), Query Frame = 3
Query:  696 MRDLVSKMNPDFDPSVIIEAARREVGDFHETKEEDDKLISEKVILHLYNLFEKYVGDSRKTYERVVQDAAMKLFPGKEHQ--RERSDLIKQ--GWSSDFTPPKHASILPICSSKAVFIRIESRGLREWGIKNSNDAWWFEEVLQPFSEEANIKCLRNKENVARGTSLEKFVKALENKENKVCPWLVGTSFLTDGVQLKIHLVTLASSHPEFSGSSALDEKGYSKLPRADVGLGTLISRRRGVYNIGTVTPCTPGEIPDETIIMSADPGQAKIINVSRAEARVWKENDPGKILNSSDFVSDVEYREKIRAKDAEEYEVRRRRDRKITGKQSRTWETL*RKRLVSK-----RFWSTVSLG-QRTVLACSRKF*GCREREGGFSRFRAVQSTLSMVADKYV 1859
            +R++   ++   DP  IIE A +E  +F +    + K      I HL  +F+ YV +SR+ YE V+   A  LFPG+E +  ++R++ +K+  G      PP+  S+LPICS+ +VFI ++ + L+ WG+ +SNDAWW++ VL+PFS EANIKCLR++EN    +S + ++ +L +     CPW VG SFLTDGVQ+K+ LVTL  +   FSGSS L+E+GYSKLPRAD  L TL+ + RGVYNI ++       I  + ++MSADPGQAK+INV  A +  W++ DP  IL +S  V   +YR +  A  ++EYE  RRR         R  +   R   ++      R W   S       L   R+F         F R RA QS L+ +AD+++
Sbjct:  264 LREMAKALDSGMDPEPIIEFALKEK-EFSDNFSANQKCAP--TIAHLDWMFKTYVSESRRKYEEVLS-RAHSLFPGEEKEISKKRNEFMKRELGRGDIIAPPRDTSVLPICSTGSVFIHVDMKTLKSWGLFHSNDAWWYKNVLRPFSREANIKCLRSRENTRYASSEQGYLSSLLDNGPAKCPWFVGESFLTDGVQIKLLLVTLEHTRESFSGSSQLNEEGYSKLPRADAPLETLLEKGRGVYNISSLVESE--SIRGDLVVMSADPGQAKVINVCSATSETWEKKDPVAILKTSTCVFGDDYRRETLASHSDEYETLRRRGTSYGIAIDRLRDEKKRTSCLTTFIQYCRSWCANSSALMNETLQKGRRFLR-------FGRHRATQSILARIADRFM 648          
BLAST of mRNA_P-lacustris_contig1178.1345.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 2.680e-67
Identity = 149/371 (40.16%), Postives = 214/371 (57.68%), Query Frame = 3
Query:  807 LISEKVILHLYNLFEKYVG--DSRKTYERVVQDAAMKLFPGKE-------HQRERSDLIKQGWSSDFT--PPKHASILPICSSKAVFIRIESRGLREWGIKNSNDAWWFEEVLQPFSEEANIKCLRNKENVARGTSLEKFVKALENKENKVCPWLVGTSFLTDGVQLKIHLVTLASSHPEFSGSSALDEKGYSKLPRADVGLGTLISRRRGVYNIGTVTPCTPGEIPDETIIMSADPGQAKIINVSRAEARVWKENDPGKILNSSDFVSDVEYREKIRAKDAEEYEVRRRRDR-------KITGKQSRT--WETL*RKRLVSKRFWSTVSLGQRTVLACSRKF*GCREREGGFSRFRAVQSTLSMVADKYV 1859
            L+ +K    LY+L +K +   D    Y   ++  A  + PG +        + +R + +K     +FT  PPK  ++LPICS+ +VFI I+ + L+ WG+ +SNDAWW+++VL+PFS+EANIKCL NKEN    +S   ++ +L       CPW++G SFLTDGVQ+K+ LVTL      F GS+ L+E GY+KLPRADV L +L+   RGVYNI ++       I ++ ++MSADPGQAK+INVS A AR W   DPG ILNSS  V   +YR    A  +++YE  RR+D+       ++  ++ RT    T  R     K + +  +      L  +RKF         F RFRA Q TL+ +ADKY+
Sbjct:  320 LVYKKYATKLYDLAKKIITEFDGTPEYAEDLRQKAQSIDPGTDIDTILDFARNKRYEFVKNELGEEFTYAPPKDTAVLPICSTGSVFIYIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLANKENSRYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLEHGRKAFPGSTQLNEAGYNKLPRADVQLESLLREGRGVYNISSLLDSP--SIREDVVVMSADPGQAKVINVSSATARTWARQDPGVILNSSTCVFGDDYRRDTLASRSDKYETFRRKDQPYGVAIDRLRNEKKRTSCLATFIR---YCKSWCANGAALLLETLQEARKFLR-------FDRFRATQKTLAKIADKYM 678          
BLAST of mRNA_P-lacustris_contig1178.1345.1 vs. uniprot
Match: D8LP46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP46_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 6.010e-38
Identity = 81/156 (51.92%), Postives = 108/156 (69.23%), Query Frame = 3
Query: 1032 FIRIESRGLREWGIKNSNDAWWFEEVLQPFSEEANIKCLRNKENVARGTSLEKFVKALENKENKVCPWLVGTSFLTDGVQLKIHLVTLASSHPEFSGSSALDEKGYSKLPRADVGLGTLISRRRGVYNIGTVTPCTPGEIPDETIIMSADPGQAKI 1499
            F+R     LR  G+ +SNDAWW+++VL+PFS+EANIKCL NKEN    +S   ++ +L+      CPW++G SFLTDGVQ+K+ LVTL      FSGSS L+E GY+KLPRAD  L +L+   RGVYNI ++   T   I ++ I+MSADPGQAK+
Sbjct:  569 FMRAHELALR--GLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLQGSGPDKCPWMIGESFLTDGVQIKLLLVTLEHGRKAFSGSSELNEAGYNKLPRADAQLESLLKEGRGVYNISSLLEST--SIREDVIVMSADPGQAKV 720          
BLAST of mRNA_P-lacustris_contig1178.1345.1 vs. uniprot
Match: A0A835YVY1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.010e-26
Identity = 106/379 (27.97%), Postives = 163/379 (43.01%), Query Frame = 3
Query:  825 ILHLYNLFEKYVGDSRKTYERVVQDAAMKLFPGKEHQRERSDLIKQGWSSDFTPPKHASILPICSSKAVFIRIESRGLREW---GIKNSNDAWWFEEVLQPFSEEANIKCLRNKENVARGTSLEKFVKALENKENKV--------------------CPWLVGTSFLTDGVQLKIHLVTLASSHPEFSGSSALDEKGYSKLPRADVGLGTLISRRRGVYNIGTVTPCTPGEIPDETIIMSADPGQAKIINVSRAEARVWKENDPGKILNSSD---FVSDVEYREKIRAKDAEEYEVRRRRDR--------KITGKQSRTWETL*RKRLVSKRFWSTVSLGQRTVLACSRKF*GCREREGGFSRFRAVQSTLSMVADKYV 1859
            I   Y L   Y+   R+ YE V  ++       KE    R+  + + W  D  P +  S LP C + A F RI+ + +R+     +K+    WW+++    FS+ ANI CLR        +    F+   + ++                       CP  V  SFLTDGVQ+K+HLVT A  +    G   L + GY  L      +  +I   RGVYN+  +T  +  ++ D  II + DPGQ +I++   A    W+  +   +++++    F  D  YRE   AK +EE E +RRRD          +TG++ RT      +     R W+  S      L    +      R   F R+ AVQ  ++ VAD  V
Sbjct:  291 IAFCYRLQRDYLSADRRLYESVRAESWRLFSQDKER---RNAFMSERWLHDGKPAREMSPLPTCKTGAAFFRIDQKAIRKLFGRALKDCGGPWWYQDFFDVFSKRANIPCLRGSGGQYARSEHGAFIALKKTQQQAAIRASLCDPDAIAAFDATALRCPLFVDASFLTDGVQVKLHLVTSALDNGGAPGLWGLAKAGYRALGSTPRTMREIIDIGRGVYNVEAITSESLSDL-DGVIISAFDPGQVEIVSGVEALGEEWRRPNAAALMSTATRRGFAGD-RYREDTLAKLSEEKEEKRRRDNGAYGGALDALTGQRRRTSALA--EYAAYCRVWAQESPHLFEELLQDTR------RHHTFRRYSAVQRAVAAVADDMV 656          
BLAST of mRNA_P-lacustris_contig1178.1345.1 vs. uniprot
Match: A0A835ZCL1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL1_9STRA)

HSP 1 Score: 108 bits (269), Expect = 4.940e-21
Identity = 98/379 (25.86%), Postives = 158/379 (41.69%), Query Frame = 3
Query:  825 ILHLYNLFEKYVGDSRKTYERVVQDAAMKLFPGKEHQRERSDLIKQGWSSDFTPPKHASILPICSSKAVFIRIESRGLREW---GIKNSNDAWWFEEVLQPFSEEANIKCLRNKENVARGTSLEKFVKALENKENKV--------------------CPWLVGTSFLTDGVQLKIHLVTLASSHPEFSGSSALDEKGYSKLPRADVGLGTLISRRRGVYNIGTVTPCTPGEIPDETIIMSADPGQAKIINVSRAEARVWKENDPGKILNSSD---FVSDVEYREKIRAKDAEEYEVRRRRDRK--------ITGKQSRTWETL*RKRLVSKRFWSTVSLGQRTVLACSRKF*GCREREGGFSRFRAVQSTLSMVADKYV 1859
            I   Y L   Y+    + YE V  ++   +   KE    RS  + + W  D  P +  S LP C + A F+RI+ + +R+     +K+    WW+++    FS+ ANI CLR        +    F+   + ++                       CP  V  SFLTDGVQ+K+HLVT A  +    G   L + GY  L      +  +I    GVYN+  +T  +  ++ D  I+ + DPGQ             W+  +   +++++    F  D  Y++   AK +E+ E +RRRD          +TG++ RT      +     R W+  S      L    +      R   F R+ +VQ  ++ VAD  V
Sbjct:   67 ITFCYGLQRDYLSADHRLYESVRAESWRLVSQDKER---RSAFMSERWQHDGKPAREMSPLPTCKTGAAFVRIDQKAIRKLFGCALKDCGGPWWYQDFFDVFSKRANIPCLRGSGGQYARSEHGAFIALKKTQQQAAIRATLCDPDAIAAFDATALRCPLFVDASFLTDGVQVKLHLVTSALDNGGAPGLWGLAKAGYRALGSMPRTMREIIDIGHGVYNVEAITSESLSDL-DGVIVSAFDPGQE------------WRRPNAAALMSTATRRGFAGD-RYQDGTLAKLSEQKEEKRRRDNAAYGGALDALTGQRRRTSALA--EYTAYCRAWAHESPHLFEELLQDTR------RHHAFRRYSSVQRAVAAVADAMV 420          
BLAST of mRNA_P-lacustris_contig1178.1345.1 vs. uniprot
Match: A0A835YJ56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ56_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.910e-12
Identity = 76/279 (27.24%), Postives = 115/279 (41.22%), Query Frame = 3
Query:  834 LYNLFEKYVGDSRKTYERVVQDAAMKLFPGKEHQRERSDLIKQGWSSDFTPPKHASILPICSSKAVFIRIESRGLREW--GIKN---SNDAWWFEEVLQPFSEEANIKCLRNKEN-VARGTSLEKFVKALENKENK----VCPWLVGTSFLTDGVQLKIHLVTLASSHPEFSGSSALDEKGYS----KLPRADVGLGTLISRRRGVYN-------IGTVTPCTPGEIP---------DETIIMSADPGQAKIINVSRAEARVWKENDPGKILNSSDFVS 1580
            L  L + YV   R  Y+ ++     +       +RE  D +   W     PPK  + LP    +  FIRI+  G+ E   G+         WW+ E +QP+++ ANI  +R + N  AR  S    ++A+E         + PWLV  +F+TDG QLK+ LVT   SH    G + L  +GY          DV  G +     GV+        IG       G  P         D  ++   DPGQ    +   A  + W+ +      N++DF +
Sbjct:  587 LAQLQQLYVETDRTDYQELMSGLFEQFPDDAAARRENRDAV---WGLLPVPPKLTAPLPRFKPQPAFIRIDRTGMGELFPGLAARMAGRGPWWYAEFMQPWAKAANITTMRQRTNHYAR--SERGVMRAIERASQPGYRVLAPWLVDRTFMTDGHQLKLLLVTSHDSHQGPHGLTELPRRGYQVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVAGGTPAAQDRLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRD------NAADFAA 854          
BLAST of mRNA_P-lacustris_contig1178.1345.1 vs. uniprot
Match: A0A835YWJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ2_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 8.830e-12
Identity = 84/312 (26.92%), Postives = 125/312 (40.06%), Query Frame = 3
Query:  831 HLYNLFEKYVGDSRKTYERVVQDAAMKLFPGKEHQRERSDLIKQGWSSDFTPPKHASILPICSSKAVFIRIESRGLRE-------WGIKNSNDAWWFEEVLQPFSEEANIKCLRNKEN-VARGTSLEKFVKALENKENK----VCPWLVGTSFLTDGVQLKIHLVTLASSHPEFSGSSALDEKG----YSKLPRADVGLGTLISRRRGVYNI-----------GTVTPCTPG-----EIPDETIIMSADPGQAKIINVSRAEARVWKENDPGKILNS---------SDFVSDVEYREKIRAKDAEEYEVRRR 1643
            HL  L + YV   R  Y+ ++     +       +RE  D +   W      PK  + LP    +  FIRI+  GL E       W        WW+ E +QP+++ ANI  +R + N  AR  S    ++A+E         + PWLV  +F+TDG QLK+ LVT   SH    G + L  +G    Y      DV  G +     GV+ +            TV   TP         D  ++   DPGQ    +   A  + W+ +       +         +  +S  +YRE   +   EE EV+RR
Sbjct:  309 HLAQLQQLYVETDRADYQDLMSGLFEQFPDDAAARRENRDAV---WGLLPVLPKLTAPLPRFKPQPAFIRIDRTGLGELFPGLAAW--MAGRGPWWYAEFMQPWAKAANITTMRQRTNHYAR--SERGVMRAIERAGQPGYRILAPWLVDRTFMTDGHQLKLLLVTSHDSHQGPHGLTELPRRGHQVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEMSGADYREWALSVRNEEGEVQRR 613          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1178.1345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
UPI0000161E541.120e-7740.90EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus silicul... [more]
UPI0000161E531.590e-7640.25EsV-1-178/222 paralog 1 n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K772_9PHAE3.720e-7542.08DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
Q6XLT6_9PHYC2.550e-7239.45FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a ... [more]
A0A6H5JA56_9PHAE2.680e-6740.16DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
D8LP46_ECTSI6.010e-3851.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVY1_9STRA4.010e-2627.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCL1_9STRA4.940e-2125.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJ56_9STRA1.910e-1227.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWJ2_9STRA8.830e-1226.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1178contigP-lacustris_contig1178:47649..49590 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1942
Cds size1191
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1178.1345.1prot_P-lacustris_contig1178.1345.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1178 48152..49342 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815490.005581-UTR-P-lacustris_contig1178:47648..481511622815490.005581-UTR-P-lacustris_contig1178:47648..48151Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1178 47649..48151 +
1693493569.8862154-UTR-P-lacustris_contig1178:47648..481511693493569.8862154-UTR-P-lacustris_contig1178:47648..48151Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1178 47649..48151 +
1622815490.065037-UTR-P-lacustris_contig1178:49342..495901622815490.065037-UTR-P-lacustris_contig1178:49342..49590Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1178 49343..49590 +
1693493569.9054034-UTR-P-lacustris_contig1178:49342..495901693493569.9054034-UTR-P-lacustris_contig1178:49342..49590Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1178 49343..49590 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815490.0521507-CDS-P-lacustris_contig1178:48151..493421622815490.0521507-CDS-P-lacustris_contig1178:48151..49342Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1178 48152..49342 +
1693493569.8959825-CDS-P-lacustris_contig1178:48151..493421693493569.8959825-CDS-P-lacustris_contig1178:48151..49342Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1178 48152..49342 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1178.1345.1

>prot_P-lacustris_contig1178.1345.1 ID=prot_P-lacustris_contig1178.1345.1|Name=mRNA_P-lacustris_contig1178.1345.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=397bp
MKWQQQPLHGFPFTRRTGESHFSSGSFRIRFLGLLASRRRLTRVIVIHSQ
KRCWCLTVHRKTANMRDLVSKMNPDFDPSVIIEAARREVGDFHETKEEDD
KLISEKVILHLYNLFEKYVGDSRKTYERVVQDAAMKLFPGKEHQRERSDL
IKQGWSSDFTPPKHASILPICSSKAVFIRIESRGLREWGIKNSNDAWWFE
EVLQPFSEEANIKCLRNKENVARGTSLEKFVKALENKENKVCPWLVGTSF
LTDGVQLKIHLVTLASSHPEFSGSSALDEKGYSKLPRADVGLGTLISRRR
GVYNIGTVTPCTPGEIPDETIIMSADPGQAKIINVSRAEARVWKENDPGK
ILNSSDFVSDVEYREKIRAKDAEEYEVRRRRDRKITGKQSRTWETL*
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mRNA from alignment at P-lacustris_contig1178:47649..49590+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1178.1345.1 ID=mRNA_P-lacustris_contig1178.1345.1|Name=mRNA_P-lacustris_contig1178.1345.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=1942bp|location=Sequence derived from alignment at P-lacustris_contig1178:47649..49590+ (Pleurocladia lacustris SAG_25_93)
AGCCAGAGAAATTGAAGCCGGAGACGCTGAGAGTATTGTCCGATAAATTT CCCGAACAATACCTCACGAAAGACGGGAAGGAGCCGAGAACATACAAGGA GACTACCTTTGTCATGTATTCTCTCGGGTCCAGTTTGGACGGGAAGCTAG TCAGCTACTGAGAACAAGAACCGTCACATGTGGATTCCAGAAGGGAGTCA AGCCAGAGGTCCTTACGAGCTTTCAAGGCAAGGTGGATAAGGCTGTCAAC TTCCTCTCAGAGGAGCGGGTTATGGGATCCCTGTTAGCGAACTACATCTT CCTCGATGCGTGTAAACATGGACAGACGCCTCCTTCTCCGAACGGGGCCT TCTGGAACGCGTGTATGGCATCCTGTTCGACGTCAAGAGCTGGTAACAAG TGGGCGCTCAGGGAAAAGGCAGACGCATTTTTGAACGCAACTGGTCTGGA GAAATTGGTGTACCCGAAGATGAATCTGGGACAGCAACGCGTATACTTGG CAAATGAAATGGCAACAGCAACCTCTACACGGGTTTCCATTCACACGGAG AACCGGAGAATCTCACTTCTCAAGTGGTTCCTTTCGGATACGATTCCTAG GACTGCTGGCGTCGAGAAGAAGGCTTACTCGAGTGATCGTCATTCACTCG CAGAAAAGATGTTGGTGTTTGACGGTTCACCGGAAAACGGCCAACATGAG GGATCTGGTGTCCAAGATGAATCCTGATTTCGATCCTTCCGTCATCATTG AAGCTGCTCGGAGAGAAGTTGGGGACTTTCACGAGACTAAAGAGGAGGAT GACAAGCTAATTTCTGAGAAGGTCATTCTTCATCTCTACAATTTGTTCGA GAAGTACGTGGGGGATTCGAGGAAGACGTACGAGAGAGTTGTCCAAGACG CTGCTATGAAACTGTTTCCCGGGAAGGAGCATCAGCGTGAGAGATCGGAT CTCATCAAGCAAGGGTGGAGCTCGGATTTCACGCCTCCGAAACACGCATC GATTCTCCCAATTTGTTCTTCAAAGGCGGTGTTTATCCGCATAGAGAGCA GAGGGCTGCGTGAGTGGGGGATAAAAAACTCCAACGACGCCTGGTGGTTC GAAGAGGTTCTGCAACCTTTCTCGGAGGAAGCGAACATCAAATGCCTAAG AAACAAGGAGAATGTAGCTCGCGGGACTAGTCTGGAGAAGTTTGTGAAGG CTTTAGAGAACAAGGAGAATAAGGTATGTCCCTGGCTTGTGGGGACAAGT TTTCTGACCGACGGAGTGCAGCTCAAGATCCATCTGGTCACGCTGGCGTC CAGTCACCCGGAGTTTTCTGGTTCAAGCGCCTTAGATGAGAAAGGATACA GTAAGCTCCCCCGTGCGGATGTGGGTTTAGGGACGTTGATATCTAGGAGA AGAGGTGTCTACAATATCGGTACGGTAACACCTTGTACACCCGGAGAGAT CCCAGACGAGACGATCATCATGTCTGCAGATCCTGGACAGGCGAAGATCA TTAACGTCTCAAGAGCTGAGGCACGTGTTTGGAAAGAGAACGACCCCGGG AAGATTTTGAACAGTTCGGACTTTGTATCGGACGTAGAGTACCGTGAAAA AATACGTGCCAAGGACGCCGAAGAATACGAAGTAAGACGAAGGAGAGATC GGAAGATTACAGGAAAGCAGTCAAGAACTTGGGAGACGTTGTAAAGAAAA CGTCTTGTATCAAAACGTTTTTGGAGTACTGTAAGTCTTGGGCAAAGAAC TGTGCTAGCATGTTCAAGGAAGTTCTGAGGGTGCAGAGAAAGAGAGGGAG GTTTTTCCCGTTTCAGGGCCGTCCAGAGTACGTTGTCGATGGTAGCAGAC AAGTATGTTCGTGGTAGCGGCAGTAGTATCGACAGATGGACATAGAACGT TCTTCATGGATATATGAAGATTCTATGGGATCCAGAAGTACG
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Coding sequence (CDS) from alignment at P-lacustris_contig1178:47649..49590+

>mRNA_P-lacustris_contig1178.1345.1 ID=mRNA_P-lacustris_contig1178.1345.1|Name=mRNA_P-lacustris_contig1178.1345.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2382bp|location=Sequence derived from alignment at P-lacustris_contig1178:47649..49590+ (Pleurocladia lacustris SAG_25_93)
ATGAAATGGCAACAGCAACCTCTACACGGGTTTCCATTCACACGGAGAAC
CGGAGAATCTCACTTCTCAAGTGGTTCCTTTCGGATACGATTCCTAGGAC
TGCTGGCGTCGAGAAGAAGGCTTACTCGAGTGATCGTCATTCACTCGCAG
AAAAGATGTTGGTGTTTGACGGTTCACCGGAAAACGGCCAACATGAGGGA
TCTGGTGTCCAAGATGAATCCTGATTTCGATCCTTCCGTCATCATTGAAG
CTGCTCGGAGAGAAGTTGGGGACTTTCACGAGACTAAAGAGGAGGATGAC
AAGCTAATTTCTGAGAAGGTCATTCTTCATCTCTACAATTTGTTCGAGAA
GTACGTGGGGGATTCGAGGAAGACGTACGAGAGAGTTGTCCAAGACGCTG
CTATGAAACTGTTTCCCGGGAAGGAGCATCAGCGTGAGAGATCGGATCTC
ATCAAGCAAGGGTGGAGCTCGGATTTCACGCCTCCGAAACACGCATCGAT
TCTCCCAATTTGTTCTTCAAAGGCGGTGTTTATCCGCATAGAGAGCAGAG
GGCTGCGTGAGTGGGGGATAAAAAACTCCAACGACGCCTGGTGGTTCGAA
GAGGTTCTGCAACCTTTCTCGGAGGAAGCGAACATCAAATGCCTAAGAAA
CAAGGAGAATGTAGCTCGCGGGACTAGTCTGGAGAAGTTTGTGAAGGCTT
TAGAGAACAAGGAGAATAAGGTATGTCCCTGGCTTGTGGGGACAAGTTTT
CTGACCGACGGAGTGCAGCTCAAGATCCATCTGGTCACGCTGGCGTCCAG
TCACCCGGAGTTTTCTGGTTCAAGCGCCTTAGATGAGAAAGGATACAGTA
AGCTCCCCCGTGCGGATGTGGGTTTAGGGACGTTGATATCTAGGAGAAGA
GGTGTCTACAATATCGGTACGGTAACACCTTGTACACCCGGAGAGATCCC
AGACGAGACGATCATCATGTCTGCAGATCCTGGACAGGCGAAGATCATTA
ACGTCTCAAGAGCTGAGGCACGTGTTTGGAAAGAGAACGACCCCGGGAAG
ATTTTGAACAGTTCGGACTTTGTATCGGACGTAGAGTACCGTGAAAAAAT
ACGTGCCAAGGACGCCGAAGAATACGAAGTAAGACGAAGGAGAGATCGGA
AGATTACAGGAAAGCAGTCAAGAACTTGGGAGACGTTGTAAATGAAATGG
CAACAGCAACCTCTACACGGGTTTCCATTCACACGGAGAACCGGAGAATC
TCACTTCTCAAGTGGTTCCTTTCGGATACGATTCCTAGGACTGCTGGCGT
CGAGAAGAAGGCTTACTCGAGTGATCGTCATTCACTCGCAGAAAAGATGT
TGGTGTTTGACGGTTCACCGGAAAACGGCCAACATGAGGGATCTGGTGTC
CAAGATGAATCCTGATTTCGATCCTTCCGTCATCATTGAAGCTGCTCGGA
GAGAAGTTGGGGACTTTCACGAGACTAAAGAGGAGGATGACAAGCTAATT
TCTGAGAAGGTCATTCTTCATCTCTACAATTTGTTCGAGAAGTACGTGGG
GGATTCGAGGAAGACGTACGAGAGAGTTGTCCAAGACGCTGCTATGAAAC
TGTTTCCCGGGAAGGAGCATCAGCGTGAGAGATCGGATCTCATCAAGCAA
GGGTGGAGCTCGGATTTCACGCCTCCGAAACACGCATCGATTCTCCCAAT
TTGTTCTTCAAAGGCGGTGTTTATCCGCATAGAGAGCAGAGGGCTGCGTG
AGTGGGGGATAAAAAACTCCAACGACGCCTGGTGGTTCGAAGAGGTTCTG
CAACCTTTCTCGGAGGAAGCGAACATCAAATGCCTAAGAAACAAGGAGAA
TGTAGCTCGCGGGACTAGTCTGGAGAAGTTTGTGAAGGCTTTAGAGAACA
AGGAGAATAAGGTATGTCCCTGGCTTGTGGGGACAAGTTTTCTGACCGAC
GGAGTGCAGCTCAAGATCCATCTGGTCACGCTGGCGTCCAGTCACCCGGA
GTTTTCTGGTTCAAGCGCCTTAGATGAGAAAGGATACAGTAAGCTCCCCC
GTGCGGATGTGGGTTTAGGGACGTTGATATCTAGGAGAAGAGGTGTCTAC
AATATCGGTACGGTAACACCTTGTACACCCGGAGAGATCCCAGACGAGAC
GATCATCATGTCTGCAGATCCTGGACAGGCGAAGATCATTAACGTCTCAA
GAGCTGAGGCACGTGTTTGGAAAGAGAACGACCCCGGGAAGATTTTGAAC
AGTTCGGACTTTGTATCGGACGTAGAGTACCGTGAAAAAATACGTGCCAA
GGACGCCGAAGAATACGAAGTAAGACGAAGGAGAGATCGGAAGATTACAG
GAAAGCAGTCAAGAACTTGGGAGACGTTGTAA
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