mRNA_P-lacustris_contig1166.1271.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1166.1271.1 vs. uniprot
Match: D8LFT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT9_ECTSI) HSP 1 Score: 437 bits (1123), Expect = 1.470e-144 Identity = 227/254 (89.37%), Postives = 236/254 (92.91%), Query Frame = 1
Query: 1 AGGMAGTAVDVALYPLDTIKTRLQSSEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKYGLGPDSPLSHMAAASVAEIVACLVRVPTENVKQKMQAGLYATAGETVNAILKGGGVRGFYAGYLTTVVREIPFSFIQFPIYEELKVRWATRKGSPLEPYEAAGCGSLSGAIAAAVTTPMDVVKTRLMLGTDKHGATYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTSLMGLG 762
AGGMAGTAVDVALYPLDTIKTRLQS EGFVK+GGLRGVYNGLSAAAVGSAPGAALFFSSYEAAK+ L PDSPL+HMAAASVAE +ACLVRVPTENVKQKMQAGL+ TA ET+NAILK G+ GFY GYLTTVVREIPFSFIQFPIYE LK WA R+G PLEPYEAAGCGS+SGA AAAVTTPMDVVKTRLMLGTDKHG TYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKT LMGLG
Sbjct: 13 AGGMAGTAVDVALYPLDTIKTRLQSPEGFVKSGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPDSPLAHMAAASVAETMACLVRVPTENVKQKMQAGLHGTATETMNAILKNSGMMGFYTGYLTTVVREIPFSFIQFPIYEGLKAAWAKRRGGPLEPYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGTDKHGETYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTWLMGLG 266
BLAST of mRNA_P-lacustris_contig1166.1271.1 vs. uniprot
Match: A0A835YJ97_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ97_9STRA) HSP 1 Score: 338 bits (867), Expect = 2.020e-106 Identity = 175/256 (68.36%), Postives = 207/256 (80.86%), Query Frame = 1
Query: 4 GGMAGTAVDVALYPLDTIKTRLQSSEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKYGLG-PDSPLSHMAAASVAEIVACLVRVPTENVKQKMQAGL---YATAGETVNAILKGGGVRGFYAGYLTTVVREIPFSFIQFPIYEELKVRWATRKGSPLEPYEAAGCGSLSGAIAAAVTTPMDVVKTRLMLGTDKHGATYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTSLMGL 759
GG+AGT+VDVAL+PLDTIKTRLQSS+GF+KAGG +GVYNGLSAAAVGSAPGAA FFS+YE K LG P +P +HMAAAS AEIVACLVRVPTENVKQKMQAG+ ++A T +IL G RGFYAGY+TT++REIPFS IQFP+YE +K W R+G+P+ Y+AA CGSLSGA A A+TTP DVVKTRLMLG DKHG Y+G+ TF+R+ +EGAAAL G+ PRV WIGIGGFVFFG YE +K +L G+
Sbjct: 14 GGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYNGLSAAAVGSAPGAAAFFSTYEGLKVRLGDPSAPSTHMAAASGAEIVACLVRVPTENVKQKMQAGVGTSSSSAVATCRSILSASGARGFYAGYMTTIMREIPFSLIQFPLYERMKAVWGRRRGAPVHSYQAAVCGSLSGAFAGALTTPFDVVKTRLMLGADKHGLPYKGMVPTFQRIVADEGAAALFGGIVPRVMWIGIGGFVFFGAYEASKRTLAGV 269
BLAST of mRNA_P-lacustris_contig1166.1271.1 vs. uniprot
Match: A0A7S1UH46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH46_9STRA) HSP 1 Score: 305 bits (782), Expect = 1.030e-93 Identity = 162/256 (63.28%), Postives = 193/256 (75.39%), Query Frame = 1
Query: 4 GGMAGTAVDVALYPLDTIKTRLQSSEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKYGLGP---DSPLSHMAAASVAEIVACLVRVPTENVKQKMQAGLYATAGETVNAILKGGGVRGFYAGYLTTVVREIPFSFIQFPIYEELKVRWATRKGS-PLEPYEAAGCGSLSGAIAAAVTTPMDVVKTRLMLGTDKHGATYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTSLMGL 759
GG+AGT VDV L+PLDTIKTRLQ+ EGF+K+GG G++ G+SAAAVGSAPGA+LFF SYE AK L P +P++HMAAAS+ E+ AC+VRVPTE +KQ+MQA ++ TA + +L GV G + GY +TV REIPFS IQFP+YE LK WA K S L PYE+A CGS+SGA +AAVTTP+DVVKTRLMLG DK G Y G+ TFRRV +EGAAAL GV PRV WI IGGF FFG YEG K SLMG+
Sbjct: 29 GGVAGTTVDVVLFPLDTIKTRLQAPEGFMKSGGFNGLFKGVSAAAVGSAPGASLFFMSYETAKQNLEPRMESAPVAHMAAASLGEVAACVVRVPTEIIKQRMQANMFPTAQGALRNVLDTEGVLGLWRGYGSTVAREIPFSLIQFPLYEHLKKVWAASKASGELRPYESALCGSVSGAFSAAVTTPLDVVKTRLMLGADKAGVAYDGMASTFRRVVADEGAAALFKGVQPRVMWISIGGFFFFGAYEGTKASLMGM 284
BLAST of mRNA_P-lacustris_contig1166.1271.1 vs. uniprot
Match: A0A7S2Y3T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3T2_9STRA) HSP 1 Score: 300 bits (769), Expect = 6.090e-92 Identity = 164/253 (64.82%), Postives = 192/253 (75.89%), Query Frame = 1
Query: 4 GGMAGTAVDVALYPLDTIKTRLQSSEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAK-YGLGPD----SPLSHMAAASVAEIVACLVRVPTENVKQKMQAGLYATAGETVNAILKGGGVRGFYAGYLTTVVREIPFSFIQFPIYEELKVRWATRKGSPLEPYEAAGCGSLSGAIAAAVTTPMDVVKTRLMLG-TDKHGATYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKT 744
GG AGT+VDVAL+PLDTIKTRLQSSEGFVKAGG RG+Y GLSAAA GSAPGAALFFSSYEA+K +G +PL HM +ASV E VACLVRVPTE VKQ+MQ G Y + E V+ I+K G GFY GYLTTV REIPFSFIQFP+YE LK W+ +G + P ++A CGS+SG IAA +TTP+DVVKTRLMLG D HG Y G+ T +++Y +EG L +G +PRVTWI IGGFVFFG YE AK+
Sbjct: 16 GGCAGTSVDVALFPLDTIKTRLQSSEGFVKAGGFRGIYRGLSAAAAGSAPGAALFFSSYEASKEWGTKTFDEKYAPLVHMGSASVGETVACLVRVPTEVVKQRMQTGQYGSFREAVSTIMKTEGPGGFYTGYLTTVAREIPFSFIQFPMYEGLKKYWSEWQGKEVGPSQSALCGSISGGIAAGITTPLDVVKTRLMLGQADLHGVKYEGMLSTLQKIYVQEGMPKLFAGFSPRVTWISIGGFVFFGSYEAAKS 268
BLAST of mRNA_P-lacustris_contig1166.1271.1 vs. uniprot
Match: A0A1V9ZD58_9STRA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD58_9STRA) HSP 1 Score: 298 bits (763), Expect = 4.290e-91 Identity = 155/256 (60.55%), Postives = 188/256 (73.44%), Query Frame = 1
Query: 1 AGGMAGTAVDVALYPLDTIKTRLQSSEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKYGLG------PDSPLSHMAAASVAEIVACLVRVPTENVKQKMQAGLYATAGETVNAILKGGGVRGFYAGYLTTVVREIPFSFIQFPIYEELKVRWATRKGSPLEPYEAAGCGSLSGAIAAAVTTPMDVVKTRLMLGTDKHGATYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTSL 750
AGG+AGT+VDVAL+PLDTIKTRLQSS+GF+KAGG +GVY GLSAAA GSAPGAALFFS+YE +K L +SPL HM+AA+ E ACLVRVPTE VKQ MQ G + ++ + G+ GFY GY + + REIPFSFIQFP++E LK W+ ++G + P++ A CGS+SG IAA++TTP+DVVKTRLMLG D HG YRG+ DTF RVYT+EG L SG+ PR WI IGGFVFFG YE A L
Sbjct: 16 AGGIAGTSVDVALFPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETSKEVLQNKLPHLSNSPLIHMSAAACGETAACLVRVPTEIVKQNMQTGALSGFQHSIKTLYAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSKQRGEQVSPFQGAICGSISGGIAASITTPLDVVKTRLMLGKDAHGVEYRGMKDTFMRVYTDEGWQTLFSGIKPRTMWISIGGFVFFGAYESASAFL 271
BLAST of mRNA_P-lacustris_contig1166.1271.1 vs. uniprot
Match: A0A6G0XXM9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXM9_9STRA) HSP 1 Score: 296 bits (759), Expect = 9.620e-91 Identity = 157/253 (62.06%), Postives = 184/253 (72.73%), Query Frame = 1
Query: 10 MAGTAVDVALYPLDTIKTRLQSSEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKYGLGP------DSPLSHMAAASVAEIVACLVRVPTENVKQKMQAGLYATAGETVNAILKGGGVRGFYAGYLTTVVREIPFSFIQFPIYEELKVRWATRKGSPLEPYEAAGCGSLSGAIAAAVTTPMDVVKTRLMLGTDKHGATYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTSL 750
MAGT VDVALYPLDTIKTRLQSS+GF+KAGG +GVY GLSAAA GSAPGAALFFS+YE+ K L DSP HMA+A++ E CL+RVPTE VKQ +Q G Y T E+V++I G+ GFY GY + + REIPFSFIQFP++E LK W +G P+ P + A CGS+SG IAA +TTP+DVVKTRLMLG D G Y+G+ D F RVYT+EG L SGV PR WI IGGFVFFGVYE A SL
Sbjct: 1 MAGTGVDVALYPLDTIKTRLQSSQGFIKAGGFKGVYKGLSAAAAGSAPGAALFFSTYESTKSFLQKQNPHLADSPAIHMASAAMGETAGCLIRVPTEIVKQNLQTGAYKTFQESVSSIYANKGIAGFYRGYWSLLAREIPFSFIQFPLWEGLKASWGKYQGEPVSPVQGAICGSISGGIAAFITTPLDVVKTRLMLGKDAQGVEYKGMRDAFTRVYTQEGWQTLFSGVKPRTMWITIGGFVFFGVYEQASASL 253
BLAST of mRNA_P-lacustris_contig1166.1271.1 vs. uniprot
Match: A0A024U5F9_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024U5F9_9STRA) HSP 1 Score: 295 bits (756), Expect = 4.840e-90 Identity = 157/256 (61.33%), Postives = 185/256 (72.27%), Query Frame = 1
Query: 1 AGGMAGTAVDVALYPLDTIKTRLQSSEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKYGLGP------DSPLSHMAAASVAEIVACLVRVPTENVKQKMQAGLYATAGETVNAILKGGGVRGFYAGYLTTVVREIPFSFIQFPIYEELKVRWATRKGSPLEPYEAAGCGSLSGAIAAAVTTPMDVVKTRLMLGTDKHGATYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTSL 750
AGGMAGT VDVALYPLDTIKTRLQSS+GF+KAGG +GVY GLSAAA GSAPGAALFFS+YE K L DSP+ HMA+A++ E CLVRVPTE VKQ +Q G + + E++ +I GV GFY GY + + REIPFSFIQFP++E +K W +G + P + A CGS+SG AA VTTP+DV+KTRLMLG D G YRG+ D F RVYT+EG L SGV PR TWI IGGFVFFGVYE A +L
Sbjct: 18 AGGMAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETTKRFLQQLQPHLADSPVVHMASAAMGETAGCLVRVPTEIVKQNLQTGAFQSFQESIRSIYGTSGVAGFYRGYWSLLAREIPFSFIQFPLWEGMKTAWGHHQGEIVSPVQGAVCGSISGGFAAFVTTPLDVIKTRLMLGKDAQGVEYRGMRDAFTRVYTQEGWQTLFSGVKPRTTWITIGGFVFFGVYEQASATL 273
BLAST of mRNA_P-lacustris_contig1166.1271.1 vs. uniprot
Match: W7TQP7_9STRA (S-adenosylmethionine mitochondrial carrier protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP7_9STRA) HSP 1 Score: 296 bits (757), Expect = 6.960e-90 Identity = 159/255 (62.35%), Postives = 184/255 (72.16%), Query Frame = 1
Query: 1 AGGMAGTAVDVALYPLDTIKTRLQSSEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKYGLGPD-----SPLSHMAAASVAEIVACLVRVPTENVKQKMQAGLYATAGETVNAILKGGGVRGFYAGYLTTVVREIPFSFIQFPIYEELKVRWATRKGSPLEPYEAAGCGSLSGAIAAAVTTPMDVVKTRLMLGTDKHGATYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTSL 750
AGG AGTAVD++L+PLDTIKTRLQ+SEGF KAGG RGVY GL AAA GSAPGAALFFS YE K P +PL HM AASV E ACL+RVPTENVKQ +QAG Y T E + I K GV GFY G+L+TV REIPFSF+QFP+YE K WA +G P+ P +AA CGS++GA+AAAVTTP+DV+KTRL+L D G Y G+ D FRRV EEG L +GV PRV WI IGGFV+FG YE + L
Sbjct: 19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLL 273
BLAST of mRNA_P-lacustris_contig1166.1271.1 vs. uniprot
Match: A0A067C9P7_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9P7_SAPPC) HSP 1 Score: 293 bits (750), Expect = 3.640e-89 Identity = 156/256 (60.94%), Postives = 184/256 (71.88%), Query Frame = 1
Query: 1 AGGMAGTAVDVALYPLDTIKTRLQSSEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKYGLGP------DSPLSHMAAASVAEIVACLVRVPTENVKQKMQAGLYATAGETVNAILKGGGVRGFYAGYLTTVVREIPFSFIQFPIYEELKVRWATRKGSPLEPYEAAGCGSLSGAIAAAVTTPMDVVKTRLMLGTDKHGATYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTSL 750
AGG+AGT+VDVAL+PLDTIKTRLQSS+GF+KAGG +GVY GLSAAA GSAPGAALFFS+YE AK L +SP HM AA+ E ACLVRVPTE VKQ MQ G ++ + G+ GFY GY + + REIPFSFIQFP++E LK W+ ++G + + A CGS+SG IAA++TTP+DVVKTRLMLG D +G YRG+ DTF RVYTEEG L SGV PR WI IGGFVFFG YE A SL
Sbjct: 17 AGGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETAKEALQTHLPHMANSPFIHMGAAACGETAACLVRVPTEIVKQNMQTGALNGFQHSIKTLHAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSAKQGEQVSALQGALCGSISGGIAASITTPLDVVKTRLMLGKDANGVEYRGMKDTFMRVYTEEGWQRLFSGVKPRTMWISIGGFVFFGAYETASASL 272
BLAST of mRNA_P-lacustris_contig1166.1271.1 vs. uniprot
Match: K3WK77_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK77_GLOUD) HSP 1 Score: 291 bits (744), Expect = 3.230e-88 Identity = 151/251 (60.16%), Postives = 186/251 (74.10%), Query Frame = 1
Query: 4 GGMAGTAVDVALYPLDTIKTRLQSSEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKYGLGPD------SPLSHMAAASVAEIVACLVRVPTENVKQKMQAGLYATAGETVNAILKGGGVRGFYAGYLTTVVREIPFSFIQFPIYEELKVRWATRKGSPLEPYEAAGCGSLSGAIAAAVTTPMDVVKTRLMLGTDKHGATYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGA 738
G +AGT+VD+AL+PLDTIKTRLQS+EGF KAGG RGVY+GLSAAA GSAPG A+FFS+YE +K +G + SP +HMAAA+ E+ ACLVRVPTE VKQ+MQ G+Y + GE V I G GFY GY + + REIPFSFIQFP++E LK +W+ + +P+ ++ A CGS++G +AA++TTP+DVVKTRLMLG D G Y G DTF RVY EEG L SGV PR WI IGGFVFFG+YE A
Sbjct: 22 GAVAGTSVDIALFPLDTIKTRLQSAEGFFKAGGFRGVYSGLSAAAAGSAPGGAMFFSTYETSKNLIGKNFPEIKHSPFAHMAAAATGEMSACLVRVPTEIVKQRMQTGVYKSIGEAVTGIRAAQGFSGFYRGYWSMIAREIPFSFIQFPLWEGLKHQWSQSQNAPVSSFQGAVCGSIAGGVAASITTPLDVVKTRLMLGKDAKGVQYTGTVDTFTRVYREEGIKRLFSGVGPRTMWISIGGFVFFGMYEKA 272 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1166.1271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1166.1271.1 >prot_P-lacustris_contig1166.1271.1 ID=prot_P-lacustris_contig1166.1271.1|Name=mRNA_P-lacustris_contig1166.1271.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=253bp MAGTAVDVALYPLDTIKTRLQSSEGFVKAGGLRGVYNGLSAAAVGSAPGAback to top mRNA from alignment at P-lacustris_contig1166:32942..39772+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1166.1271.1 ID=mRNA_P-lacustris_contig1166.1271.1|Name=mRNA_P-lacustris_contig1166.1271.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=6831bp|location=Sequence derived from alignment at P-lacustris_contig1166:32942..39772+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1166:32942..39772+ >mRNA_P-lacustris_contig1166.1271.1 ID=mRNA_P-lacustris_contig1166.1271.1|Name=mRNA_P-lacustris_contig1166.1271.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1518bp|location=Sequence derived from alignment at P-lacustris_contig1166:32942..39772+ (Pleurocladia lacustris SAG_25_93)back to top |