mRNA_P-lacustris_contig1160.1239.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1160.1239.1 vs. uniprot
Match: D8LI38_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI38_ECTSI) HSP 1 Score: 466 bits (1199), Expect = 8.710e-145 Identity = 257/386 (66.58%), Postives = 287/386 (74.35%), Query Frame = 3
Query: 1620 ARKGGNADEDEAVAVRFCYVDASNFNAVKSQLPLYAAVEAGAKGLLQAFRSPVFDTSMSRKPSTVFAKDFLAGNRHTATAAASGSSMSPSSLAFDRSGGASHEADGDGAT--GSSGRWERRRLSGXXXXXXXXXQAGPKVFQGVAGRRPLGSQVTACERTACIVEWTSSFVKQGQDQTKLGFNLSFVPAVTPNASINA---GDGGGGYMEASGRGVYVGDSRLKSEHALDRDLLSLGITEGKRHMVVVDTNLAPNTPYRFSVGVVYGETVGPFSEFSPPARTSMVTAPLAVPSVPKGSPGAHAVTLHFPRPHDDGGSPILWYHVMSRPTGENILNRWQAVGMEAAPAPRVNVSVYDTEPQPVEVKVEHLLPGVAYQFRVCAQNDIG 2762
A+ GG A+++ A AVRFCYVDASNFN+VKSQLPLYAAVEAGA GLLQAFRSPVFDTSMSR PSTV A +F G R + S SS + + SG A +ADGD + G + +RRRLS QA PKVFQGVAGR+PLG QVTACERTAC VEWT+SFVKQGQDQT+LGFNLSFVPA T NAS A G GGGGYME V+VGDSRLKSEHA DRDLL+LGITEGKR+ +VVDTNLAP+T YRFSV VVYGET GPFSEFS PARTSMVTAPL VP P+GSPG HAVTL F P D G +L++WQAVGM APAPR++VSV+DTEPQ V VKVEHL+PGVAYQFRVCAQND+G
Sbjct: 457 AKAGGGAEDEGATAVRFCYVDASNFNSVKSQLPLYAAVEAGANGLLQAFRSPVFDTSMSRNPSTVSASEFFEGGRKATSVNPSASSSTDAD-----SGEAGLDADGDSSATAGENAGRKRRRLSSTEEVGEEGRQARPKVFQGVAGRQPLGPQVTACERTACTVEWTNSFVKQGQDQTRLGFNLSFVPAATTNASSQAAGHGSGGGGYME-----VFVGDSRLKSEHARDRDLLNLGITEGKRYTIVVDTNLAPDTLYRFSVCVVYGETAGPFSEFSKPARTSMVTAPLPVPRAPEGSPGTHAVTLRFLPPPDHG-----------------VLSKWQAVGMAPAPAPRLDVSVHDTEPQSVAVKVEHLVPGVAYQFRVCAQNDVG 815
BLAST of mRNA_P-lacustris_contig1160.1239.1 vs. uniprot
Match: A0A6H5KFC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC2_9PHAE) HSP 1 Score: 439 bits (1129), Expect = 2.080e-136 Identity = 274/525 (52.19%), Postives = 337/525 (64.19%), Query Frame = 1
Query: 4 LPGAAKARGTR---PWMATLLLLFLIPVQFALAMHTAFLETNMKVAWAALVDTGGNXXXXXXXXRHATSNSRGRAREIVNTMLADCHGRRSGAWGAECDRALYFDSVLMKIDRSSSSSSADSAANANTVAEE--EYQMATLDSPATEIAVVSATQLPFSAFFHEYAVPRRAVVMLSTEGDGLSASGSEKPADVADGRNQRDVVDQSTVQQEEEKEEEMEELRVNERFLSAIQACLPYPADATATVAAAGTVDGPLRACHDSLLKSLPVPLQVSEDFVQRFRGEDVLPVEKHSEVERFASGWQRIHRTRRGAYIPATACPAGTNTMVSVMSGTLEILVFAPADDFPGLKPTFGNAPCSPIAPASTLRG--GAKIFYKSDVGDDKNMVDKEDSTAEIDKDTGNENGKEKRRSGLGDSSEKNTMSSMPNARLLLEEVLGLKRSGMNQEELSLPPQYSLDQVGRIDVQEDTTT-AGEEEPQKLAAADNAWSDNRGNSCYSSEGLYWPHEPKYCADVWREDTQGNYTATR 1554
L GA RGT PWM +LFL+ F LA HT FLETNMK AW L+ G XXXXXXXX AREIV+TMLADCHGR+S WGAECDRALY ++VL KID SSS+ S A A AE+ + Q LDS A EIAV+ +LPFSAFFHEYAVPRR V +LS G GS KPAD ADG+ Q D+ DQ+ +++ EEE + RV + LS I++CLP+ D A GTVDGPLRACHDSLL+SLP+P SEDFVQRFRG+DVLPV +H+EVERF SGWQRIHRTR GAY P TACPAG NT+++VMSGTL++LV++ AD P LKPTFGNAPC P+ P+ T G G +N D+E ++D TG RSG G + E T + + R LEE GL+R+ +Q++ + + SL++ D EDT++ A +EEPQ L A+DN + +R S + SE YWPHEPKYCADVWRED++ N TR
Sbjct: 14 LSGATTERGTASVVPWMT---MLFLVHSNFVLATHTVFLETNMKEAWTVLLSAGXXXXXXXXXXXXX-------AREIVDTMLADCHGRKSEGWGAECDRALYLETVLKKIDSSSSAGSI-FATGAGATAEDTQQQQQVALDSAANEIAVIYEAELPFSAFFHEYAVPRRPVAILS---GGGGVGGSGKPADAADGKEQGDLGDQAMDTAQQDGEEENGQQRVQDLILSGIESCLPHSVDP-----ALGTVDGPLRACHDSLLESLPIPRYASEDFVQRFRGQDVLPVGEHAEVERFVSGWQRIHRTRPGAYTPPTACPAGANTLITVMSGTLQVLVYSSADKLPSLKPTFGNAPCPPV-PSRTSAGDDGDSKXXXXXXXXHENNGDEE--RFDVDNGTGEXXXXXXHRSGSGHAEETTTSTVLNPTREPLEEGFGLERTVADQQKQNFSMESSLNEARVKDETEDTSSSAKKEEPQTLDASDNTSNGHRRYSHHPSESHYWPHEPKYCADVWREDSEDNSIVTR 516
BLAST of mRNA_P-lacustris_contig1160.1239.1 vs. uniprot
Match: D8LI37_ECTSI (PA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI37_ECTSI) HSP 1 Score: 385 bits (989), Expect = 4.170e-122 Identity = 199/241 (82.57%), Postives = 216/241 (89.63%), Query Frame = 3
Query: 2847 MSGFHPGHQHLRLPNVTDASVSYAGEMEPPPGAGFDPFEREVHGPTVVLDDQAGKIRLGNKTSALEDIDVWTCHYSPKSFKVKAEAVMAQPADARGELENGRFARNRLVVVERGGIPIVHKVLRAQRAGALGVIVADDGRCGSSFGQMCVHGSDPPEGWAALDMPRPWLDVRVPVVLMLREDVERLTAAIGAAAEEAESMAWSSLYDGWLNSLSSXXXXXXXXXXXX-----GDWMTSSML 3554
MSGFH GH+HLRLPNVTD SV+YAGE EPPPGAGFDPFEREVHGPTVVLDD+A KIR+ + SA EDIDVWTCH+SP+SFKVK+E V+AQPADAR ELENGRF RNR+VVV+RG IPIVHKVL AQRAGALGVIVADDGRCG SFGQ+CV+GSDPPEGWAALDMPRPWLDVRVPVVLMLRED ERLTAA GAAA AESMAW+SLYDGW++S+SSXXXXXXXXXXXX GDW TSS L
Sbjct: 1 MSGFHAGHEHLRLPNVTDVSVTYAGETEPPPGAGFDPFEREVHGPTVVLDDRASKIRVASNNSAFEDIDVWTCHFSPRSFKVKSEVVVAQPADARSELENGRFVRNRIVVVQRGDIPIVHKVLAAQRAGALGVIVADDGRCGGSFGQLCVYGSDPPEGWAALDMPRPWLDVRVPVVLMLREDAERLTAAAGAAAAHAESMAWTSLYDGWVDSMSSXXXXXXXXXXXXXXVGGGDWRTSSAL 241
BLAST of mRNA_P-lacustris_contig1160.1239.1 vs. uniprot
Match: A0A7S2WLH8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLH8_9STRA) HSP 1 Score: 185 bits (470), Expect = 3.930e-45 Identity = 182/629 (28.93%), Postives = 275/629 (43.72%), Query Frame = 3
Query: 1653 AVAVRFCYVDASNFNAVKSQLPLYAAVEAGAKGLLQAFRSPVFDTSMSRKPSTVFAKDFLAGNR--------HTATAAASGSSMSPSSLAFDRSGGASHEADGDGATGSSGRWERRRLSGXXXXXXXXXQAGPKVFQGVAGRRPLGSQVTACERTACIVEWTSSFVKQGQDQTKLGFNLSFVPAVTPNASINAGDGGGGYMEASGRGVYVGDSRLKSEHALDRDLLSLGITEGKRHMVVVDTNLAPNTPYRFSVGVVYGETVGPFSEFSPPARTSMVTAPLAVPSVP----------KGSPGAHAVTLHFPRPHDDGGSPILWYHVMSRPTGENILNRWQAVGMEAAPAPRVNVSVYD---TEPQPVEVKVEHLLPGVAYQFRVCAQNDIG-----------TSPWSAPSEPVVVLAASADDNTNRRDISMSGFHPGHQHLRLPNVTDASVSYAGEMEPPPGAGFDPFEREVHGPTVVLDDQAGKIRLGNKTSALEDIDVWTCHYSPKSFKVKAEAVMAQPA-----------DARGELENGRFARNRLVVVERGGIPIVHKVLRAQRAGALGVIVADDGRCGSSFGQMCVHGSDPP--EGWAALDMPRPWLDVRVPVVLMLREDVERL 3404
A ++C+VDASNFN K L A V+ +G+ S + DT+M R P + A + A + TA+A GSS +P + R G + D T RW+ R + + P + GRR + + W S F+ + D T G+N+++ + + G+ + S V V +HA D D +T +VD L P+ Y F + V YGET P S S T ++AP + S P KG +++ P DDGG+ + + V R E + + W +G + P V+ V D TE + + +++HLLP Y+FR+ A N IG T+P S E VV + R + + F + TD++ ++ + F EVHGP V L D + L + L + VW H+SPK++KV AE ++ P R L N ++R+ ++ERGG+P+VHK AQ AGAL VIV DDG+C + F Q+C G+D +G+A LD+ PW +R+PVVLMLR D ++L
Sbjct: 113 ATLFKYCFVDASNFNRAKEATALRAHVDPETRGMSSFLASLLLDTTMQRVPPSA-ALPWAAHSSWPRNEAVSETASAKEDGSSTAPKT-GRSRRGNRRSQKDWQAET----RWKWRVIG-----LTLPTLSPPTILD--VGRRNV------------TLGWLSGFLVKAGDSTAYGYNITWHRGHSREVA--------GWKQVSHEQVEV-------QHAYD-DYHVHDLTYS-----LVD-ELEPDVSYTFRIMVYYGETSSPSSASSRIVHTPALSAPSRMESPPVLWRRPSKQDKGKLTGTKLSIVASPPVDDGGADVKGFIVQRRHVQEEMHDDWVTLG--SFPIHWVDHVVSDDGATEHR-LAFELDHLLPNCDYEFRIAAYNKIGVAAPGTGSRLRTNPVSRAGEEVV-------GGSGHRSMPLHHFRELDEDFH----TDSAAEVREHLKALHSSTFF----EVHGPVVTLSDLLQTVTLEKPGTGLT-LPVWVSHWSPKAYKVTAEVIVTDPPMGDLSEPNKLPSTRTPLHNAATVQHRIALMERGGVPLVHKAALAQDAGALAVIVTDDGKC-TEFDQLCCPGADKKFGDGFAKLDLAAPWEKIRIPVVLMLRADADKL 674
BLAST of mRNA_P-lacustris_contig1160.1239.1 vs. uniprot
Match: A0A7S1XPP5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPP5_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.930e-44 Identity = 187/629 (29.73%), Postives = 267/629 (42.45%), Query Frame = 3
Query: 1644 EDEAVAVRFCYVDASNFNAVKSQLPLYAAVEAGAKG-----LLQAFRSPVFDTSMSRKPSTVFAKDFLAGNRHTATAAASGSSMSPSSLAFDRSGGASHEADGDGATGSSGRWERRRLSGXXXXXXXXXQAGPKVFQGVAGRRPLGSQVTACERTACIVEWTSSFVKQ-GQDQTKLGFNLSFVPAVTPNASINAGDGGGGYMEASGRGVYVGDSRLKSEHALDRDL--LSLGITEGKRHMVVVDTNLAPNTPYRFSVGVVYGETVGPFSEFSPPARTSMVTAPLAVPSVPKGS-PGAHAVTLHFPRPHDDGGSPILWYHVMSRPT---GENILNRWQAVG-MEAAPAPRVNVSVYDTEPQPVEVKVEHLLPGVAYQFRVCAQNDIGTSPWSAPSEPVVVLAAS----ADDNTNRRDISM-----SGFHPGHQHLRLPNVTDASVSYAGEMEPPPGAGFDPFEREVHGPTVVLDDQAGKIRL-GNKTSALEDIDVWTCHYSPKSFKVKAEAVMAQPADA---RGELENGRFARNRLVVVERGGIPIVHKVLRAQRAGALGVIVADDGRCGSSFGQMCVHGSDPP----EGWAALDMPRPWLDVRVPVVLMLREDVERLTAAIGAAAEEAE 3440
E +A C +DASN+ A ++ + AA A G LL A + +M R P+ + +L G + P+ A D +GD + +RRR Q KV + R P V + R VEW + + D +LGFN+S+ P GV D + L +D ++LGI V D L P+T Y FSV + YG+ G SE S ART V AP VP G +H+V L++ P D GG P + + V R ++ +W VG ++A A + ++ ++ + V+HLLPG YQFRV A N G SPWS + + + A + + D + SG H H + N+T + + G V L D A + + G + VW +SP SF V+A+ MA+PA A G + +R+++VERGG P+V KVL AQ+AGALGVI+ DDGRC F Q CV GSD +G+AA D P W VR+P VL+L +D E L + + AE
Sbjct: 311 ESPPLAAVLCVIDASNYAAALDEVRVLAAAYPKAWGSFGRQLLSA------NLNMERTPTATSWEQYLQG-----------AVTEPAKTAGD---------EGDASLAGVDGGKRRRPKKNFAQWQEEKQWMAKVREHTLPRLP-PPVVASAGRNDAKVEWECDYKRPISNDVVRLGFNISYQSVDNPED----------------HGVVTVDIEDVRKRPLYQDAAAVNLGIESSVMSTTVAD--LEPDTAYEFSVVLFYGDAKGKASEVSKAARTMPVAAPGRFHKVPVGVVKDSHSVQLYWEPPLDHGGDPNMHFEVERRQQFNRADHADGQWVNVGKVQAFSAVTEDEALKNS----MTTLVDHLLPGSMYQFRVSAVNSEGRSPWSVYTAALETVKAPKFRPGAGSIDSGDAPVLHGHGSGAHRIHDAHKTGNMTAEATT---------------------GAIVNLHDHAHSLLVDGGDGGTNLQLAVWAAAWSPASFSVRAQLAMAEPATACRAEGGAGHPSVVHHRVLLVERGGCPLVQKVLTAQKAGALGVIIVDDGRC-EKFDQHCVPGSDKVLSEGQGFAAQDHPGDWRKVRIPAVLVLADDGEVLRSRVVKETPPAE 868
BLAST of mRNA_P-lacustris_contig1160.1239.1 vs. uniprot
Match: A0A7S3UWA2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWA2_HETAK) HSP 1 Score: 162 bits (410), Expect = 1.690e-40 Identity = 112/297 (37.71%), Postives = 145/297 (48.82%), Query Frame = 3
Query: 2526 FPRPHDDGGSPILWYHVMSRPTGENILNRWQAVGMEAAPAPRVNVSVYDTEPQPVEVKVEHLLPGVAYQFRVCAQNDIGTSPWSAPSEPVVVLAASADDNTNRRDISMSGFHPGHQHLRLPNVTDASVSYAGEMEPPPGAGFDPFEREVHGPTVVLDDQAGK--IRLGNKTSALEDIDVWTCHYSPKSFKVKAEAVMAQPADARGELENGRFARNRLVVVERGG-IPIVHKVLRAQRAGALGVIVADDGRCGSSFGQMCVHGSDPP---EGWAALDMPRPWLDVRVPVVLMLREDVE 3398
FP P DDGG PI YH+M T E+ + W+ +G +D + V HLLPG AY F+V A+ G WSAPS P + + + +G G + + + + + + + HGP V L D + +R G A+ + WTC +SP++F V AEAV A P A L N R RL +V RGG +P+V K LRAQ AGALGVIV DDGRC +F Q CV G+D E WA D P PW VRVPVVL+L D E
Sbjct: 9 FP-PEDDGGEPITGYHLMKLHTDEHTHDDWEFLG--------TFFPNFDPNMGGLCHTVPHLLPGTAYSFKVAARTAAGDGLWSAPSPPARTPLPQLEVDPKGKVTGGTGHVYGRGWDPITHTSFKKDMFEAPLHLETHSSDKKTSYDQHGPVVTLHDHEARLEVRRGGGGPAVA-VAAWTCAWSPQAFSVTAEAVRADPFLADRPLRNKAVLRKRLALVGRGGGVPLVTKALRAQAAGALGVIVVDDGRC-RAFDQRCVRGADLAARGELWARGDRPGPWRGVRVPVVLVLAGDAE 294
BLAST of mRNA_P-lacustris_contig1160.1239.1 vs. uniprot
Match: A0A8J2X4D2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4D2_9STRA) HSP 1 Score: 169 bits (427), Expect = 2.080e-39 Identity = 183/632 (28.96%), Postives = 256/632 (40.51%), Query Frame = 3
Query: 1632 GNADE-----DEAVAVRFCYVDASNFNAVKS------QLPLYAAVEAGAKGLLQAFRSPVFDTSMSRKPSTVFAKDFLAGNRHTATAAASGSSMSPSSLAFDRSGGASHEADGDGATGSSGRWERRRLSGXXXXXXXXXQAGPKVFQGVAGRRPLGSQVTACERTACIVEWTSSFVKQGQDQTKLGFNLSFVPAVTPNASINAGDGGGGYMEASGRGVYVGDSRLKSEHALDRDLLSLGITEGKRHMVVVDTNLAPNTPYRFSVGVVYGETVGPFSEFSPPARTSMVTAPLAVPSVPKGSPGAHAVTLHFPRPHDDGGSPILWYHVMSRP-TGENILNRWQAVGMEAAPAPRVNVSVYDTEPQPVEVKVEHLL--------PGVAYQFRVCAQNDIGTSPWSAPSEPVVVLAASADDNTNRRDISMSGFHPG---HQHLRLPNVTDASVSYAGE------------MEPPPGAGFDPFEREVHGPTVVLD-------DQAGKIRLGNKTSALEDIDV--WTCHYSPKSFKVKAEAVMAQPADARGELENGRFARNRLVVVERGGIPIVHKVLRAQRAGALGVIVADDGRCGSSFGQMCVHGSDPPEG--WAALDMPRPWLDVRVPVVLMLRE 3389
GN D+ + AVRFC VDASN ++V+ + A LL A P FD M+R S + +F R +P + + G+ S RW R +S P+V AGR ER C + +SS+ ++ D GF + F P+AS+ G + A G G G R + A R + + +V + P Y F V V YGE GP+S+ S A T AP + + G +TL PRP DDGGS I + R EN W+ VG A T+ P+++ V + L +Y+F V N +G +PWS P+ P TN + ++S H H +P D V A E + FD VHGP V + D + + +A D W CH+SP+ K AE V A P DA +N R R+V+V+RG P+ K L AQRAGALGV++AD+G+C ++ Q CV G+D G WA LD+ RPW V +PVVL+L +
Sbjct: 161 GNDDKLTFTVSKGAAVRFCVVDASNVHSVRRLAKESPDVHFPHAKSLVISELLTALDDPEFDFVMARSYSEMPWSEFATWPR-----------PAPEEKPVHQQ--TKRQRKNFGSWQSEQRWNWRVVSATIPELPP-----PEVVH--AGR----------ER--CELRLSSSYERRKHDDRPFGFEVQFEQVTPPDASL-------GEVAAWGPGDEKGTQRFDA--ASHRQEKHETVFANHKSYIVDVKDTLPARGYVFRVRVYYGEVEGPWSKPSEEASTPARGAPSKIVGSSVQALG-RGLTLTVPRPFDDGGSTIKGLVLRFRHHDSENFPGAWRHVGSFA------------TKDWPLQLDVTNELLTSREDSSHNHSYEFSVAPYNRLGVAPWSGPTAPCA---------TNNEEKAVSYGHGAFDRHTRHHIP-TDDELVQIATEEGKKLYEEASHYVRKHLDDLFDEHAHSVHGPLVSIGGSLTASLDVYDSLHNYRRPNARPDYSAQAWLCHWSPRGHKAVAELVAADPLDACSTHKNAAPLRGRVVLVKRGQCPLATKALLAQRAGALGVVIADNGKC-TALDQYCVPGADRSRGEAWARLDLQRPWAGVHIPVVLVLAD 727
BLAST of mRNA_P-lacustris_contig1160.1239.1 vs. uniprot
Match: A0A6A3MUP0_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MUP0_9STRA) HSP 1 Score: 166 bits (419), Expect = 6.190e-38 Identity = 184/655 (28.09%), Postives = 268/655 (40.92%), Query Frame = 3
Query: 1614 VVARKGGNADEDEAVAVRFCYVDASNFNAVKSQLPLYAAV------EAGAKGLLQAFRSPVFDTSMSRKPSTVFAKDFLAGNRHTATAAASGSSMSPSSLAFDRSGGASHEADGDGATGSSGRWERRRLSGXXXXXXXXXQAGPKVFQGVAGRRPLGSQVTACERTACIVEWTSSFVKQGQDQTKLGFNLSFVPAVTPNASINAGDGGGGYMEASGRGVYVGDSRLKSEHALDRDLLSLGITEGKRHMVVVDTNLAPNTPYRFSVGVVYGETVGPFSEFSPPARTSMVTAPLAVPSVPKGSPGAHAV-----TLHFPRPHDDGGSPILWYHVMSRP-----------TGENILNRWQAVGMEAAPAPRVNVSVYDTEPQP---------VEVKVEHLLPGVAYQFRVCAQNDIGTSPWSAPSEPVVVLAASADDNTNRRDISMSGFHPGHQHLRLPNVTDAS-VSYAGEMEPPPGAGFDPFE---------REVHGPTVVLDDQAGKIRL--GNKTSALEDID----VWTCHYSPKSFKVKAEAVMAQPADARGELENGRFARNRLVVVERGGIPIVHKVLRAQRAGALGVIVAD-DGRCGSSFGQMCVHGSDPP--EGWAALDMPRPWLDVRVPVVLMLREDVERLTAAIGAAA 3428
VV+ + +RFCY DA+N VK L A + + GLL A +P FD++ SR+P+ N T+ + P+ LA S A+GD G + RR + + VA P+ T RTA + W + D T G+ +S+ + S+ G G +E + Y +R + L G R + V T L Y FSV ++ GE G S A +VT+P A PS +G P A V TL + DDGG I Y V TG N A+ E VN S+ + + + KV L PG AY FRV A N +G WS S V + + D S P + + P T S V + + DP ++ P VVL D +++L N + + +++ W+ H+SP+ F V AE V+A P DA L N R+R+++ RGG+P V K+ AQRAGALG+I+AD DG CG F Q CV G+D EG+AA + W + ++P VL+L++ + L +G+A+
Sbjct: 372 VVSTMRTSTSSQAVKVLRFCYCDAANVKGVKQAAGLDALLMTSDNKDEAVYGLLHALETPDFDSTFSRRPT----------NSDTSWSTFVKWPRDPAYLARKNRRHKSGGANGDDQEGEEEQLSRRERLKQWQDDKRWERYIASLTLPVAWP-PIVVNTT---RTAATLRWQELYQPLKHDLTSYGYEISWKREA--DGSVTEGPAVTGELENTVTVTYDQITRSRMPSTL------FGDDFDGRDLEAVITGLQAEMAYSFSVRLLVGEAQGAVSG----ASRRVVTSPCAPPSPIRGVPEAGDVEETCLTLRWLDAEDDGGKEIELYLVSMEKLPEKGEQDDLSTGRGADNG--ALVREHEKIIAVNSSISNGQVTAERLSSGALWLSTKVCGLFPGAAYTFRVAAMNVLGAGFWSHRSSRVEIAPRRRLSSLESGDRSQPLAVPTLKGVGDPGYTVVSGVDILSQSDLSALIAQDPHRILRASGAQTQDATLPRVVLSDVKEQVQLLSSNASEGVAEVERSFEAWSSHHSPRLFDVSAELVLADPPDASQPLRNAHAVRDRVLLAVRGGVPFVFKLHFAQRAGALGLIIADADGVCGGGFDQSCVPGADKRRGEGFAAQERHALWREAQIPCVLVLKDTAQELLERLGSAS 998
BLAST of mRNA_P-lacustris_contig1160.1239.1 vs. uniprot
Match: G5AEH8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AEH8_PHYSP) HSP 1 Score: 162 bits (411), Expect = 4.530e-37 Identity = 183/651 (28.11%), Postives = 264/651 (40.55%), Query Frame = 3
Query: 1653 AVAVRFCYVDASNFNAVKSQLPLYAAV------EAGAKGLLQAFRSPVFDTSMSRKP--STVFAKDFLAGNRHTATAAASGSSMSPSSLAFDRSGGASHEADGDGATGSSGRWERRRLSGXXXXXXXXXQAGPKVFQGVAGRRPLGSQVTACERTACIVEWTSSFVKQGQDQTKLGFNLSFVPAVTPNASINAGDGGGGYMEASGRGVYVGDSRLKSEHALDRDLLSLGITEGKRHMVVVDTNLAPNTPYRFSVGVVYGETVGPFSEFSPPARTSMVTAPLAVPSVPKGSPGAHAV-----TLHFPRPHDDGGSPILWYHVMSRPTGE----NILNRWQ-----AVGMEAAPAPRVNVSVYDTEPQP---------VEVKVEHLLPGVAYQFRVCAQNDIGTSPWSAPSEPVVVLAASADDNTNRRDISMSGFHPGHQHLRLPNVTD---------ASVSYAGEMEPPPGAGFDPFE---------REVHGPTVVLDDQAGKIRLGNKTSALE-------DIDVWTCHYSPKSFKVKAEAVMAQPADARGELENGRFARNRLVVVERGGIPIVHKVLRAQRAGALGVIVAD-DGRCGSSFGQMCVHGSDPP--EGWAALDMPRPWLDVRVPVVLMLREDVERLTAAIGAAA 3428
A +RFCY DA+N VK + A + + GLL A +SP FD++ SR+P S F+ R P+ LA S A+GD G + RR + + VA P+ T RT + W + D T G+ +S+ + S G +E S + +R + L G R + V T L T Y FSV ++ GE G S A +VT+P A PS +G P V L + DDGG I Y V E + LN + AV E VN S+ + + KV L PG AY FRV A N +G WS S VV+ RR ++ Q+L +P + + V + + DP ++ P VVL D +++L + ++ + + W+ HYSP+ F V AE V+A P DA L N R+R+++ RGG+P V K+ AQRAGALG+I+AD DG CG F Q CV G+D EG+AA + W + ++P VL+L++ + L +GAA+
Sbjct: 306 AKVLRFCYCDAANVKDVKQAAGVDALLMTSDNRDEAVYGLLHALQSPAFDSTFSRRPTSSDTSWNTFVKWPRD------------PAYLARKNRRHKSGGANGDDQEGEEEQLSRRERLKQWQDDKRWERYIASLTLPVAWP-PIVVNTT---RTTATLRWQELYQPLKHDLTSYGYEVSW-KRENRDGSATEDPALAGELENSVNVTHDQLTRSRMPSTL------FGDDFDGRDLEAVITGLQAETAYSFSVRLLVGEAQGAVSG----ASRRVVTSPCAPPSPIRGVPETRDVEETCLVLRWLDAEDDGGKKIELYLVSMEKLPEIGEQDDLNNGRGADNGAVVREHEKVIAVNSSISHGQVTAETLSSGALWLSTKVCGLFPGAAYTFRVAAMNVLGAGHWSHRSSRVVIAP--------RRRLTSLESGAKSQYLAVPTLKGVGDPGYSVVSGVDILSQSDLSALIAQDPHRILRATGVQVQDATLPRVVLSDVNEQVQLLSSNASEQGTVGVERSFEAWSSHYSPRLFDVSAELVLADPPDASQPLRNAHAVRDRVLLAVRGGVPFVFKLHFAQRAGALGLIIADADGVCGGGFDQSCVPGADKRRGEGFAAQERHTLWQEAQIPCVLVLQDTAQELLERLGAAS 921
BLAST of mRNA_P-lacustris_contig1160.1239.1 vs. uniprot
Match: A0A8K1C2W5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2W5_PYTOL) HSP 1 Score: 160 bits (404), Expect = 3.110e-36 Identity = 168/600 (28.00%), Postives = 251/600 (41.83%), Query Frame = 3
Query: 1662 VRFCYVDASNFNAVKSQLPLYAAVEAGAKGLLQAFRSPVFDTSMSRKPSTVFAKDFLAGNRHTATAAASGSSMSPSSLAFDRSGGASHEAD-GDGATGSSGRWERRRLSGXXXXXXXXXQAGPKVFQGVAGRRPLGSQVTACERTACIVEWTSSFVKQGQDQTKLGFNLSFVPAVTPNASINAGDGGGGYMEASGRGVYVGDSRLKSEHALDRDLLSLGITEGKRHMVVVDTNLAPNTPYRFSVGVVYGETVGPFSEFSPPARTSMVTAPLAVPSVPKGSPGAHAVT---LHFPRPHDDGGSPILWYHVMSR----PTGENILNRWQAVGMEAAPAPRVNVSVYDTEPQPV--EVKVEHLLPGVAYQFRVCAQNDIGTSPWSAPSEPVVVLAASADDNTNRRDISMSGFHPGHQHL------RLPNVTDASVSYAGEMEPPPGAGFDPFEREVHGPTVVLDDQAGKIRLGNKTSALEDIDVWTCHYSPKSFKVKAEAVMAQPADARGELENGRFARNRLVVVERGGIPIVHKVLRAQRAGALGVIVAD-DGRCGSSFGQMCVHGSDPP--EGWAALDMPRPWLDVRVPVVLMLREDVERL 3404
+RFC+VDASN NAVK++L A V+ A+ L + +SP FD SM R+P+ D + N++ P + + + D G R ER +L + + + + PL V RT+ I+ W + D T G+ + + T + E G S+ A+ L +GK+ ++ L ++ Y F + + GE +G S+ S RT P AV VP + +A T L + P DDGG I Y V R P+ + + + + E +N + + V V +L+PG +Q RV A N IG PWSA S+P + N + P + +L N T A V+ A A D ++ P +VL D K + DVW+ H+SP+ F+V +E A P DA L N ++R+V++ RG +P V KV AQ AGALGVI+ D +G C + F Q CV G+D EG+ D W +R+P VL L+E RL
Sbjct: 351 LRFCFVDASNVNAVKAELTTEALVDPEARSFLLSMQSPTFDASMFRRPTI---SDAI-WNKYITW---------PKEVKILKRSDVLNGGDFGSEPAVVLSRRERLKL-------WQEDKRWDRHIETLTLPVPLPPIVLDTGRTSVILCWQDLYKTPKNDITVFGYEIRWRREETSEDEAS---------ELPVEGAVNFTSKQLKRSAMPTTLFGDEF-DGKQIEGTIE-GLEADSVYSFDLRIWVGEAIGMESDRSRSIRTKPCAVPDAVRGVPYATSTENAATCLKLRWLEPSDDGGRRINAYLVALRELKDPSTDVLESEDPSRTDETEQLVVINATSDVSRQSDVWSVSSVCNLVPGTTFQVRVAAVNIIGVGPWSARSDPATLSPYDKSSRLNEIPVLYGIGDPRYSRASRFLTQQLNNATLALVTEAQR------ASTDTYQGVR--PRIVLSDIQEKAIVAVGADTELQFDVWSGHFSPRKFQVSSEIARADPFDASSPLVNAADVKDRVVIIARGNVPFVFKVYHAQLAGALGVIIGDFNGTCHNRFDQRCVPGADRTRGEGFGLHDRHVLWQRIRIPFVLALKEASTRL 911 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1160.1239.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1160.1239.1 >prot_P-lacustris_contig1160.1239.1 ID=prot_P-lacustris_contig1160.1239.1|Name=mRNA_P-lacustris_contig1160.1239.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=589bp MSRKPSTVFAKDFLAGNRHTATAAASGSSMSPSSLAFDRSGGASHEADGDback to top mRNA from alignment at P-lacustris_contig1160:6550..19609- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1160.1239.1 ID=mRNA_P-lacustris_contig1160.1239.1|Name=mRNA_P-lacustris_contig1160.1239.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=13060bp|location=Sequence derived from alignment at P-lacustris_contig1160:6550..19609- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1160:6550..19609- >mRNA_P-lacustris_contig1160.1239.1 ID=mRNA_P-lacustris_contig1160.1239.1|Name=mRNA_P-lacustris_contig1160.1239.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3534bp|location=Sequence derived from alignment at P-lacustris_contig1160:6550..19609- (Pleurocladia lacustris SAG_25_93)back to top |