mRNA_P-lacustris_contig1157.1203.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1157.1203.1 vs. uniprot
Match: D8LDF8_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF8_ECTSI) HSP 1 Score: 617 bits (1590), Expect = 1.290e-211 Identity = 348/479 (72.65%), Postives = 371/479 (77.45%), Query Frame = 1
Query: 271 MVFVGLYQRVSQSYEVALAQYQARVAAGVQPATRVVNLFSVGTEEALLVSANFLYLGLVILLYLRMLKRKKPVRLRTLMLGYNTLNVCISLFVACSLLFFKVASRGSSGAA---------GDGGVGGFVCNPLRIDLQGQMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVFTALGWYSWWSRHLTKLQLTQFVVILVQSATALYRGPDCGSPDFVKVVLLLYMGSLLGLFALFFAKRSILGPAEDPGMCGVIKSLEAERSGGCGGGXXXXXXXXXXXAGRDGSTAVETAGAVAAAVGGAEAASWHGNASLDEAGEAAIRLPAGFSREAPPRVVTYSYQITPIGSPMPGLFVSEEIATRSGDRSSRSSSSDDAASQGADHIGSHSVFSVKGGKPGSTVSWTVTRLGSPYSGGVVTGGDEGMRPGERSHPPEE 1680
MVFV LYQRVSQSYEVAL QYQ RVAAG+QP+TRVVNL+SVGTEE LLV ANFLYLGLV+LLYLRML+RK+PVRLR LMLGYNTLNVCISLFVACSLLFFKV+SRG +G G GGVGGFVCNPLR DLQGQMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGS+LPFDFNGDMYLPIMLNSIVHVLVYLHYV +ALG +SWWSRHLTKLQLTQF VILVQSATA YRGPDCGSPDFVKVVLLLYM SLLGLFALFF KRS+LGPAEDPGMCGVIKSLEA+ SGG GG TA +T G VAA A A SWHGN LDE G A I LP GF E TYSYQ+TP+G+PMPGLFVSEEIAT + SR S ++ GS FSVKGGKP TVSW VT +G+P GG GG G +P SH E
Sbjct: 1 MVFVRLYQRVSQSYEVALGQYQDRVAAGLQPSTRVVNLYSVGTEEGLLVCANFLYLGLVVLLYLRMLRRKEPVRLRALMLGYNTLNVCISLFVACSLLFFKVSSRGFNGEGRDGSVVSPGGGGGVGGFVCNPLRTDLQGQMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSILPFDFNGDMYLPIMLNSIVHVLVYLHYVLSALGKHSWWSRHLTKLQLTQFAVILVQSATAFYRGPDCGSPDFVKVVLLLYMISLLGLFALFFVKRSLLGPAEDPGMCGVIKSLEADSSGGIGG------------------TAGKTEGVVAAPAA-AAAGSWHGNVLLDEVGAAEIWLPPGFPAETLAGSTTYSYQLTPVGAPMPGLFVSEEIATAT----SRGSKPISRLRGDSNDAGSCISFSVKGGKPRFTVSWAVTAVGAPCGGGG--GGTGGKQPLSPSHKSSE 454
BLAST of mRNA_P-lacustris_contig1157.1203.1 vs. uniprot
Match: W7TVB6_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVB6_9STRA) HSP 1 Score: 292 bits (748), Expect = 1.910e-86 Identity = 192/457 (42.01%), Postives = 255/457 (55.80%), Query Frame = 1
Query: 277 FVG-LYQRVSQSYEVALAQYQARVAAGVQPATRVVNLFSVGTEEALLVSANFLYLGLVILLYLRMLKRKKPVRLRTLMLGYNTLNVCISLFVACSLLFFKVAS--------RGSSGAAGDGGVGGFVCNPLRIDLQGQMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVFTALGWYSWWSRHLTKLQLTQFVVILVQSATALYRGPDCGSPDFVKVVLLLYMGSLLGLFALFFAKRSILG-PAEDPGMCGVIKSLEAERSGGCGGGXXXXXXXXXXXAGRDGSTAVETAGAVAAAVGGAEAASWHGNASLDEAGEAAIRLPAGFSREAPPRVVTYSYQITPIGSPMPGLFVSEEIATRSG--DRSSRSSSSDDAASQGA-------DHIGSHSVFSVKGGKPGSTVSWTV 1590
F+G LY+R ++S +A Y+ R+A G+QP T ++NLF V +E LLV N YL L LY M +R+K +L+ ++ YN +NV +S +V+ S+L +K+ S + ++ + F+CN L + G +A VFAV+YLQKY E +DT+ F+LRRSFRQVTF HLFHH SITVIVGS++PFDF GDMY PI++NS+ HV VYLHY T LG WWS HL LQ+ QF I +QS A Y GP CGSPDF K+++++Y GS+L LF+ FF KR IL PA D MCGV+K+ AE G S+ G+ L G A + LP F RE + Y Y +TP+GSPMP L+VS E+ SG D D +S+G G F V+GG+P VSWTV
Sbjct: 17 FMGTLYRRATESLHIAQTAYEHRIAGGLQPTTPLINLFVVENQEQLLVWMNLGYLVLTCGLYAHMRRREKAHQLKQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHPG--LASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSAHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYILRQPAYD--MCGVMKNDPAEA--------------------------------------GLSTLSYVGSVRLGPDGSAVVCLPRHF-REGLSSPL-YVYHLTPVGSPMPNLYVSREVLWGSGISDGEINRKRGDRTSSEGVVLMEQVVQRAGGSYTFVVRGGRPKGLVSWTV 429
BLAST of mRNA_P-lacustris_contig1157.1203.1 vs. uniprot
Match: A0A7S2FL32_9STRA (Elongation of fatty acids protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FL32_9STRA) HSP 1 Score: 236 bits (602), Expect = 7.990e-66 Identity = 166/444 (37.39%), Postives = 233/444 (52.48%), Query Frame = 1
Query: 280 VGLYQRVSQSYEVALAQYQARVAAGVQPATRVVNLFSVGTEEALLVSANFLYLGLVILLYLRMLKRKKPVR---LRTLMLGYNTLNVCISLFVACSLLFFKVASRGSSGAAGDGGVGGFVCN-PLRID--LQGQMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVFTALGWYSWWSRHLTKLQLTQFVVILVQSATALYRGPDCGSPDFVKVVLLLYMGSLLGLFALFFAKRSILGPAEDPGMCGVIKSLEAERSGGCGGGXXXXXXXXXXXAGRDGSTAVETAGAVAAAVGGAEAASWHGNASLDEAGEAAIRLPAGF-SREAPPRVVTYSYQITPIGSPMPGLFVSEEIATRSGDRSSRSSSSDDAASQGADHIGSHSVFSVKGGKPGSTVSWTV 1590
+G R+ SY+ A + ++ R+AAG QP + T L++AN +YL + +LY M KR V ++ +++ YN + V ++ +V +L++K+ G FVCN R+D + +A VF VFY QK+ E DT+ F+LRRSFRQVTF H+FHH SIT +VG++L FD++GDM+LPI LN++VHVL+Y HY+ TALG SWW ++LT LQL QF +I +QSA A RGP CG+PD+ KV+++LYM S+L LF FF KR I M GVI +T T E ++ G A L G A I LP G + + V +YQ+T IG+ MPGLFV E+ T +++ + FSV GGK G+ VSW V
Sbjct: 27 MGFSDRMLASYDSAWSGFEERLAAGQQPPITMK-----WTNFTFLIAANAIYLTVTYILYSVMSKRTTGVNDKMIKKVIMVYNAVCVFLAGYVVVGMLYYKMQEPGK-----------FVCNVSARVDDPEAAKFIAWVFWVFYAQKFWEFCDTWFFILRRSFRQVTFLHIFHHSSITFVVGTILKFDYSGDMFLPIFLNALVHVLMYSHYLVTALGIKSWWRQYLTSLQLAQFCLISLQSAVAYSRGPSCGAPDWAKVIMILYMCSMLFLFGKFFVKRYIQKDTS-ANMDGVI------------------------------TTKAFTP----------EYITYQGTAILGAKGTAKIELPLGAKTMTSRGSRVNLAYQLTAIGASMPGLFVESEVDTAPDSNQAKNEAPS---------------FSVSGGKEGAKVSWQV 398
BLAST of mRNA_P-lacustris_contig1157.1203.1 vs. uniprot
Match: A0A7S2B7C1_9STRA (Elongation of fatty acids protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7C1_9STRA) HSP 1 Score: 231 bits (590), Expect = 3.500e-64 Identity = 167/445 (37.53%), Postives = 232/445 (52.13%), Query Frame = 1
Query: 280 VGLYQRVSQSYEVALAQYQARVAAGVQPATRVVNLFSVGTEEALLVSANFLYLGLVILLYLRMLKRKKPVR---LRTLMLGYNTLNVCISLFVACSLLFFKVASRGSSGAAGDGGVGGFVCNPLRIDL--QGQMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVFTALGWYSWWSRHLTKLQLTQFVVILVQSATALYRGPDCGSPDFVKVVLLLYMGSLLGLFALFFAKRSILGPAEDPGMCGVIKSLEAERSGGCGGGXXXXXXXXXXXAGRDGSTAVETAGAVAAAVGGAEAASWHGNASLDEAGEAAIRLP--AGFSREAPPRVVTYSYQITPIGSPMPGLFVSEEIATRSGDRSSRSSSSDDAASQGADHIGSHSVFSVKGGKPGSTVSWTVT 1593
VG+ R+SQS+ RVA G+QP + F T L+ AN +YL + + LY M +RK+ + L+ ++ YN + V ++ +V +++ +KV G FVCN + Q +A VF +FY QK+ E +DT+ FLLRRSFRQVTF H+FHH SIT +VGS+L FD++GDM+LPI LN+ VHVL+Y HY+ TA+G SWW ++LT LQL QF I +QS A RGP CGSPD+ KV ++ YMGS+L LFA FF R I + G+ GVI + + + AS+HG L+E+G A I LP A + P V Y +TP+G+ MP LFVS E+ T++ DA ++G S + F+V GG V W T
Sbjct: 16 VGILGRISQSWTENWDLLDERVATGMQPTITL--RF---TSFEFLLYANTVYLLVTLSLYQYMKQRKEGLNDKLLKRIIFYYNAICVGLAGYVVYAMVSYKVTVD----------AGSFVCNTSAKPNTPETQYIAFVFWIFYAQKFWEFMDTWFFLLRRSFRQVTFLHIFHHSSITFVVGSILRFDYSGDMFLPIFLNACVHVLMYSHYLVTAMGIKSWWRQYLTTLQLLQFCAISMQSGLAWSRGPSCGSPDWSKVGMMCYMGSMLWLFARFFYHRYIKND-DRIGLEGVITTKAFDP----------------------------------------QYASFHGTVELNESGCAQIVLPESAKSVMKRTPSKVNVMYLLTPVGARMPDLFVSREVFTKN----------TDATAEGIQEANSSASFAVAGGAANKKVCWQFT 394
BLAST of mRNA_P-lacustris_contig1157.1203.1 vs. uniprot
Match: A0A813IE84_POLGL (Elongation of fatty acids protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IE84_POLGL) HSP 1 Score: 201 bits (512), Expect = 1.970e-53 Identity = 146/395 (36.96%), Postives = 195/395 (49.37%), Query Frame = 1
Query: 295 RVSQSYEVALAQYQARVAAGVQPATRVVNLFSVGTEEALLVSANFLYLGLVILLYLRMLKRKKPVR---LRTLMLGYNTLNVCISLFVACSLLFFKVASRGSSGAAGDGGVGGFVCNPLRI-----DLQGQ--MVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVFTALGWYSWWSRHLTKLQLTQFVVILVQSATALYRGPDCGSPDFVKVVLLLYMGSLLGLFALFFAKRSILGPAEDPGMCGVIKSLEAERSGGCGGGXXXXXXXXXXXAGRDGSTAVETAGAVAAAVGGAEAASWHGNASLDEAGEAAIRLPAGFSREAPPRVVTYSYQITPIGSPMPGLFVSEE 1449
R SY ++AR AAG QP+ L A L+ N YL LY M +RK+ ++++L YN + V ++ +V +++ S FVCN D G +A+VF VFY QK+ E +DT+ F+ R+SFRQVTF H+FHHCSI ++VG +LPF+FNGDMYLPI+LN+ VHVL+Y HY+ +ALG + W LT LQL QF++I QSA +L RG CG P F K++L+ YMGS+L LF FF K I G GV+K EA + S G +LD G + LP+ F T YQ+TPIG+PMP L VS E
Sbjct: 12 RFVASYSSEWTLWEARAAAGSQPSLPYTGL-------AFLICMNAFYLLFTFGLYRFMEQRKEAFNCKPFKSILLAYNAICVALAGYVVWGIVYILATEDRS-----------FVCNTTVTPGSAEDKSGSAAFLAQVFWVFYAQKFWEFLDTWFFIARKSFRQVTFLHVFHHCSINLVVGLILPFEFNGDMYLPILLNAAVHVLMYSHYLVSALGLPTPWRPFLTSLQLLQFMLIATQSAMSLSRGDSCGGPYFGKIILVGYMGSMLLLFGNFFLKSYIFKKPTGFGD-GVVKRAEAFQV----------------------------------------TRSHSGRVTLDAEGAGQVELPSLFKNG------TLHYQVTPIGAPMPELHVSRE 341
BLAST of mRNA_P-lacustris_contig1157.1203.1 vs. uniprot
Match: A0A7S4FUQ6_9EUGL (Elongation of fatty acids protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FUQ6_9EUGL) HSP 1 Score: 173 bits (438), Expect = 1.060e-44 Identity = 106/284 (37.32%), Postives = 158/284 (55.63%), Query Frame = 1
Query: 274 VFVGLYQRVSQSYEVALAQYQARVAAGVQPATRVVNL-----FSVGTEEALLVSANFLYLGLVILLYLRMLKR----KKPVRLRTLMLGYNTLNVCISLFVACSLLFFKVASRGSSGAAGDGGVGGFVCNPLR-IDLQGQMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVFTALGWYSWWSRHLTKLQLTQFVVILVQSATALYRGPDCGSPDFVKVVLLLYMGSLLGLFALFFAK 1095
V L RVS S+E + + Y R+A G QP + L F + +AN YL + +L + + R K ++ LML YN + + ++ +VA +L+ K A GD G F CN + + QG+ +A V+Y QKY E +DT++F+L+ S+RQV+F H++HH SITV+ L +D NGD YL N ++HV +Y HY + L +WW +HLT +QL QF+ + VQ+ RGP+CG PD+ KVV++ Y S+L LFA FF +
Sbjct: 5 VTASLMDRVSTSFETSHSAYLLRLANGTQPRYGLEGLPAWLAFLDPHNTIAVGAANVAYLVICAVLTILIKARGSGFKAEGMMKALMLVYNAVCMLLAGYVAVGILYVK--------ATGDPGT--FACNKMDLVTAQGRWLAHFIWVYYAQKYWEYLDTWIFILKASWRQVSFLHVYHHISITVVSAIFLRYDINGDCYLAAFANGLIHVFMYSHYFASVLKINTWWRKHLTTMQLVQFMTVFVQACLMFARGPECGYPDWTKVVMIAYQSSMLVLFAQFFVQ 278
BLAST of mRNA_P-lacustris_contig1157.1203.1 vs. uniprot
Match: A0A4D9CSJ6_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSJ6_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.570e-40 Identity = 108/269 (40.15%), Postives = 135/269 (50.19%), Query Frame = 1
Query: 814 LPFDFNGDMYLPIMLNSIVHVLVYLHYVFTALGWYSWWSRHLTKLQLTQFVVILVQSATALYRGPDCGSPDFVKVVLLLYMGSLLGLFALFFAKRSILG-PAEDPGMCGVIKSLEAERSGGCGGGXXXXXXXXXXXAGRDGSTAVETAGAVAAAVGGAEAASWHGNASLDEAGEAAIRLPAGFSREAPPRVVTYSYQITPIGSPMPGLFVSEEIATRSG--DRSSRSSSSDDAASQGA-------DHIGSHSVFSVKGGKPGSTVSWTV 1590
+PFDF GDMY PI++NS+ HV VYLHY T LG WWS HL LQ+ QF I +QS A Y GP CGSPDF K+++++Y GS+L LF+ FF KR IL PA D MCGV+K+ AE G S+ G+ L G A + LP F RE + Y Y +TP+GSPMP L+VS E+ SG D D +S+G G F V+GG+P VSWTV
Sbjct: 1 MPFDFGGDMYFPILVNSLCHVAVYLHYFCTCLGLNPWWSPHLATLQVAQFAAIFLQSLLAFYEGPRCGSPDFSKILMMVYTGSMLVLFSDFFFKRYILRQPAYD--MCGVMKNDPAEA--------------------------------------GLSTLSYVGSVRLGPDGSAVVCLPRHF-REGLSSPL-YVYHLTPVGSPMPNLYVSREVLWGSGISDGEINCKRGDRTSSEGVVLMEQVVQRAGGSYSFVVRGGRPKGLVSWTV 227
BLAST of mRNA_P-lacustris_contig1157.1203.1 vs. uniprot
Match: D8M728_BLAHO (Elongation of fatty acids protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M728_BLAHO) HSP 1 Score: 151 bits (381), Expect = 2.250e-37 Identity = 88/246 (35.77%), Postives = 142/246 (57.72%), Query Frame = 1
Query: 397 TEEALLVSANFLYLGLVILLYLRMLKRKKPVRLRTLMLGYNTLNVCISLFVACSLLFFKVASRGSSGAAGDGGVGGFVCNPLRIDL---QGQMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVFTALGWYSWWSRHLTKLQLTQFVVILVQSATALYRGPDCGSPDFVKVVLLLYMGSLLGLFALFFAKRSILGPAEDP 1125
T+ ++ N Y + +L M +R++ + M+ YN + VC++ + +L + G V + ID + + + RVF VFY+QKY E +DTF+F+LR+S+RQVTF H++HH SIT++V L NGD +P++LNS VH+L+Y HY+ + LG+ WW +LTKLQL QFV+I + + L +G +C P ++ +L+ YM +++ LF+ F+ KR + G E P
Sbjct: 25 TDYKSMIIGNIFYFVTIYVLMQIMNRREERFNPKKFMIVYNFICVCLATYCFYGMLRYYYLD-------------GSVLSCSNIDFASEKAKQLVRVFYVFYIQKYWEFLDTFIFILRKSYRQVTFLHVYHHSSITIMVRLFLFAYPNGDNCVPVLLNSFVHMLMYTHYLCSILGFKCWWRSYLTKLQLVQFVLITLVNVVDLVKG-NCQMPHWLNWLLIAYMATMIVLFSRFYIKRYLGGNEEKP 256
BLAST of mRNA_P-lacustris_contig1157.1203.1 vs. uniprot
Match: A0A196S6Y3_BLAHN (Elongation of fatty acids protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S6Y3_BLAHN) HSP 1 Score: 139 bits (349), Expect = 5.310e-33 Identity = 68/144 (47.22%), Postives = 99/144 (68.75%), Query Frame = 1
Query: 667 VARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVFTALGWYSWWSRHLTKLQLTQFVVILVQSATALYRGPDCGSPDFVKVVLLLYMGSLLGLFALFFAKR 1098
+A VF +FY+QKY E +DTFLF+LR+S+RQVTF H++HH SITV+V L + GD +P++LNS +H+L+Y HY+ + LG WW LT LQL QFV+I + L +G C P ++ +++ YMG+++ LF+ FF KR
Sbjct: 104 IAHVFYIFYVQKYWEFIDTFLFILRKSYRQVTFLHVYHHSSITVVVSLFLHYYPAGDNCIPVLLNSFIHMLMYSHYLCSILGVKCWWRSLLTLLQLVQFVLITAANVMDLVKG-TCQMPHWMNWLMIAYMGTMIVLFSKFFMKR 246
BLAST of mRNA_P-lacustris_contig1157.1203.1 vs. uniprot
Match: UPI000711B6C6 (elongation of very long chain fatty acids protein 4-like protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711B6C6) HSP 1 Score: 134 bits (338), Expect = 1.720e-31 Identity = 79/230 (34.35%), Postives = 129/230 (56.09%), Query Frame = 1
Query: 412 LVSANFLYLGLVILLYLRMLKRKKPVRLRTLMLGYNTLNVCISLFVACSLLFFKVASRGSSGAAGDGGVGGFVCNPLRIDLQG-QMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPFDFNGDMYLPIMLNSIVHVLVYLHYVFTALGWYSWWSRHLTKLQLTQFVVILVQSATALYRGPDCGSPDFVKVVLLLYMGSLLGLFALFFAKR 1098
+V N Y ++ +L L+ +++++ + M+ YN + VC++ + +L + C+ + D + + +A VFYLQKY E DTFLF+LR+S+RQVTF H++HH SIT +V L GD +P++LNS VH+L+Y HY+ + LG WW LTKLQL QFV+I + + + G C P ++ +++ YM +++ LF+ F+ KR
Sbjct: 32 MVIGNVFYFAMIFIL-LKFMEKRERFNPKPFMVVYNFICVCLATYCFYGMLTCYFLKKPF-----------LYCSDIDFDTENSKAIAHYVYVFYLQKYWEFTDTFLFILRKSYRQVTFLHVYHHSSITFMVRLFLHVYPGGDNCMPVLLNSFVHMLMYTHYLCSILGVKCWWRSILTKLQLIQFVIITIINVLDVING-GCQEPLWLNWLMIAYMATMILLFSQFYVKR 248 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1157.1203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1157.1203.1 >prot_P-lacustris_contig1157.1203.1 ID=prot_P-lacustris_contig1157.1203.1|Name=mRNA_P-lacustris_contig1157.1203.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=471bp MVFVGLYQRVSQSYEVALAQYQARVAAGVQPATRVVNLFSVGTEEALLVSback to top mRNA from alignment at P-lacustris_contig1157:10929..19077- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1157.1203.1 ID=mRNA_P-lacustris_contig1157.1203.1|Name=mRNA_P-lacustris_contig1157.1203.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=8149bp|location=Sequence derived from alignment at P-lacustris_contig1157:10929..19077- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1157:10929..19077- >mRNA_P-lacustris_contig1157.1203.1 ID=mRNA_P-lacustris_contig1157.1203.1|Name=mRNA_P-lacustris_contig1157.1203.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2826bp|location=Sequence derived from alignment at P-lacustris_contig1157:10929..19077- (Pleurocladia lacustris SAG_25_93)back to top |