mRNA_P-lacustris_contig115.1156.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig115.1156.1 vs. uniprot
Match: D8LPQ2_ECTSI (ARFRP1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPQ2_ECTSI) HSP 1 Score: 377 bits (967), Expect = 1.800e-127 Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 2
Query: 74 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGKFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVVDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADIAVQFDMHKITKVAFRLQPCSGLTCDGVEEGIHWIVDEAKKRARPRV 649
MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKG FKKV GIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFV+DSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADI+VQFDMHKITKVAFRLQPCSGLTCDGV EGIHWIVDEAKKRARPRV
Sbjct: 1 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADISVQFDMHKITKVAFRLQPCSGLTCDGVAEGIHWIVDEAKKRARPRV 192
BLAST of mRNA_P-lacustris_contig115.1156.1 vs. uniprot
Match: A0A835YY21_9STRA (ARFRP1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY21_9STRA) HSP 1 Score: 261 bits (667), Expect = 3.420e-82 Identity = 125/189 (66.14%), Postives = 155/189 (82.01%), Query Frame = 2
Query: 74 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGKFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVVDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADIAVQFDMHKITKVAFRLQPCSGLTCDGVEEGIHWIVDEAKKRAR 640
MFSL+AGL RYL SKT++NVLILGLD AGKTTLLEQMKG FKKVPGIPP+KIPPT+GLNV KMD+GG +TFWD+GGQVR+R+LWE+YYADAH LI V+DSAD RFEEA++AF V+EQ ELH +PL++LANKQD+ A S DIA QFD HK+ V FR+ S L+ +GV EGI W++ +A+++ +
Sbjct: 1 MFSLLAGLWRYLTSKTQVNVLILGLDDAGKTTLLEQMKGIFKKVPGIPPAKIPPTIGLNVAKMDIGGVSVTFWDVGGQVRLRALWERYYADAHALICVMDSADAARFEEAQLAFHAVREQAELHALPLLLLANKQDVAGACSGGDIAAQFDAHKVMGVPFRVHAVSALSGEGVNEGISWLIAKAREKTQ 189
BLAST of mRNA_P-lacustris_contig115.1156.1 vs. uniprot
Match: A0A7S2BA16_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA16_9STRA) HSP 1 Score: 263 bits (671), Expect = 5.610e-82 Identity = 118/192 (61.46%), Postives = 157/192 (81.77%), Query Frame = 2
Query: 65 TNSMFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGKFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVVDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADIAVQFDMHKITKVAFRLQPCSGLTCDGVEEGIHWIVDEAKKRAR 640
+ +MFSLI+G + F+K E+ VLILGLD+AGKTTLLEQMKG F K GIPP +IPPT+GLN+GKMDVG C++ FWDLGGQVR+RS+WEKYYA+AHG++FV+DSADVGR EEA++AFD V+E EL G+P+++LANKQDLP A++ DIA+ F++H + RLQP S LTC+G+E+G+ W+V+E++ R
Sbjct: 57 SGTMFSLISGFWKIFFAKVEVQVLILGLDHAGKTTLLEQMKGLFNKQQGIPPERIPPTIGLNIGKMDVGTCRVIFWDLGGQVRMRSIWEKYYAEAHGMVFVIDSADVGRMEEAKLAFDAVREHEELRGIPVLLLANKQDLPGAMAIEDIAMHFEIHNLPPRLVRLQPASCLTCEGIEDGVRWVVEESRTADR 248
BLAST of mRNA_P-lacustris_contig115.1156.1 vs. uniprot
Match: W7TPL1_9STRA (1-family small gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPL1_9STRA) HSP 1 Score: 249 bits (637), Expect = 1.130e-77 Identity = 117/190 (61.58%), Postives = 154/190 (81.05%), Query Frame = 2
Query: 74 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGKFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVVDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADIAVQFDMHKITKV-AFRLQPCSGLTCDGVEEGIHWIVDEAKKRAR 640
MFSL+AG I+YLFSKTE++VLILGLD+AGKTTLLEQ KG F+KV GIPP KI PTVGLNVGKMD+ GC + WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEEA++AF ++ + +L VP+++ ANKQDLP A+S D+A F++ ++ + ++ CS LTC+G+E G+ W+V EAK AR
Sbjct: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190
BLAST of mRNA_P-lacustris_contig115.1156.1 vs. uniprot
Match: A0A4D9CTS6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTS6_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.310e-60 Identity = 104/175 (59.43%), Postives = 140/175 (80.00%), Query Frame = 2
Query: 119 TEINVLILGLDYAGKTTLLEQMKGKFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVVDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADIAVQFDMHKITKV-AFRLQPCSGLTCDGVEEGIHWIVDEAKKRAR 640
++++VLILGLD+AGKTTLLEQ KG F+KV GIPP KI PTVGLNVGKMD+ GC + WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEEA++AF ++ + +L VP+++ ANKQDLP A+S D+A F + ++ + ++ PCS LTC+G+E G+ W+V EAK AR
Sbjct: 1022 SQLHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFKIDRVLRHRVIQVHPCSALTCEGLESGVRWLVQEAKGLAR 1196
BLAST of mRNA_P-lacustris_contig115.1156.1 vs. uniprot
Match: T0QBI1_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QBI1_SAPDV) HSP 1 Score: 206 bits (523), Expect = 1.440e-60 Identity = 98/190 (51.58%), Postives = 134/190 (70.53%), Query Frame = 2
Query: 74 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGKFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVVDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADIAVQFDMHKI-TKVAFRLQPCSGLTCDGVEEGIHWIVDEAKKRAR 640
MFSL+ G YLFSK E+++LI+GLDYAGKTTLLEQ+KG+F K PGIP KIPPTVGLN+ K+D+ + FWDLGGQ R+R++W KYY+++HG++FV+D+AD RF+EAR A DT+ EL G+P+++LANK DL +A IA + + + R Q S L+ DGVE+ +HW++ K R
Sbjct: 1 MFSLLLGFWNYLFSKAEVHILIIGLDYAGKTTLLEQLKGRFGKKPGIPLDKIPPTVGLNIAKVDISRTNVIFWDLGGQERLRAIWSKYYSESHGIVFVLDAADEARFDEARSALDTMLANAELDGIPILLLANKNDLADAQDMGVIAECLGVASLPSHHEARAQSISALSMDGVEDAVHWLIGAVKNSDR 190
BLAST of mRNA_P-lacustris_contig115.1156.1 vs. uniprot
Match: A0A7S2WHH1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WHH1_9STRA) HSP 1 Score: 206 bits (523), Expect = 3.400e-60 Identity = 107/211 (50.71%), Postives = 142/211 (67.30%), Query Frame = 2
Query: 74 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGKFKKVPG-IPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVVDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADIAVQF-----DMHKITKVAF---------------------RLQPCSGLTCDGVEEGIHWIVDEA 625
MFSL++G ++LFSKTEI +LI+GLD+AGKTTLLEQMKG F+K IP KIPPTVGLN+G+MD+ C++ FWDLGGQ+ +RS+W+KYY++AHGLIFV+DSAD+ RFEEA+ A +++ EL GVPL++ ANKQDL + +I F + KI A +LQP S LTC G+E+GI W+V+ A
Sbjct: 1 MFSLLSGFFKWLFSKTEIQILIIGLDHAGKTTLLEQMKGIFQKAANQIPLDKIPPTVGLNIGRMDIDNCRVIFWDLGGQIALRSIWDKYYSEAHGLIFVLDSADIDRFEEAKAAMESIASHPELAGVPLLVCANKQDLATSRGYDEINEYFRVVSESLGKIGSNADSEQNSMNASEHILSLGKRRERKLQPVSALTCSGIEDGIRWLVNAA 211
BLAST of mRNA_P-lacustris_contig115.1156.1 vs. uniprot
Match: A0A8J6CF14_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CF14_DIALT) HSP 1 Score: 204 bits (519), Expect = 5.480e-60 Identity = 99/191 (51.83%), Postives = 137/191 (71.73%), Query Frame = 2
Query: 74 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGKFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVVDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADIAVQFDMHKITKVA--FRLQPCSGLTCDGVEEGIHWIVDEAKKRAR 640
MFSLIAGL YLF K E VLILG+D+AGKTT LEQMKG F+K+ + P KIPPTVGLN+G+M+VG KL FWDLGGQ +R +WEKY+A+ HGL++V+D+AD RF+E+R F+ + + +L GVP+++LANKQDL A + +I +F + + +R++P S +T G+ +GI W+VD K +R
Sbjct: 1 MFSLIAGLFEYLFKKAEFQVLILGVDHAGKTTALEQMKGLFQKIEPLAPEKIPPTVGLNIGRMEVGRVKLIFWDLGGQSGLRGIWEKYFAEVHGLVYVIDAADDQRFDESRRIFEALVKHPDLAGVPVLILANKQDLHSAATIDEIDERFGFGSLCAPSQQYRIEPVSAITGSGIADGITWMVDMLKLSSR 191
BLAST of mRNA_P-lacustris_contig115.1156.1 vs. uniprot
Match: A0A2R5GXN1_9STRA (ADP-ribosylation factor-related protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GXN1_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.010e-58 Identity = 108/231 (46.75%), Postives = 140/231 (60.61%), Query Frame = 2
Query: 74 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGKFKKVPG-IPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVVDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADIAVQFDM------HKITKVAF------------------------------------------RLQPCSGLTCDGVEEGIHWIVD 619
MFSL++G ++LFSKTE+ +LI+GLD+AGKTTLLEQMKG F K IP KIPPTVGLN+G+MD+ C++ FWDLGGQ+ +RS+W+KYY++AHGLIFV+DSAD RFEEA+ A +++ + EL GVPL++ ANKQDLP A DI F + H + A RLQP S LTC G+E GI W++D
Sbjct: 1 MFSLLSGFFKWLFSKTEVQILIIGLDHAGKTTLLEQMKGIFHKSANQIPLDKIPPTVGLNIGRMDINNCRVIFWDLGGQIALRSIWDKYYSEAHGLIFVLDSADTDRFEEAKAAMESLVDHPELTGVPLLVCANKQDLPTAKEFEDIDAYFQITDDAAKHAASSAAKNSGSSHTSASNAEAGALLDVVDTHPLGIDSHHRSATGKRRERRLQPVSALTCSGIEVGIRWLID 231
BLAST of mRNA_P-lacustris_contig115.1156.1 vs. uniprot
Match: A0A484KDI7_9ASTE (Uncharacterized protein n=5 Tax=Convolvulaceae TaxID=4118 RepID=A0A484KDI7_9ASTE) HSP 1 Score: 200 bits (508), Expect = 2.770e-58 Identity = 94/189 (49.74%), Postives = 135/189 (71.43%), Query Frame = 2
Query: 74 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGKFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVVDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADIAVQFDMHKITKVAFRLQPCSGLTCDGVEEGIHWIVDEAKKRAR 640
MFSL GL +Y+FSKTE +VLILG+D AGKTTLLE++K +F + G+PP +I PTVGLN+G+++V KL FWDLGGQ +RS+WEKYY +AH ++FVVD+A RFE+A+ A + V +LHG PL++LANKQDL EA S ++ D+ K+ + +++Q S G++E ++W+VD ++ R
Sbjct: 1 MFSLFYGLWKYVFSKTEFHVLILGIDKAGKTTLLEKLKSQFLNIEGLPPDRIVPTVGLNIGRVEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVLFVVDAACPSRFEDAKSALEKVLRHEDLHGAPLLILANKQDLAEAASAEELDRYLDLKKLGERVYKIQAVSAYEGIGIKESVNWLVDAMERSKR 189 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig115.1156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig115.1156.1 >prot_P-lacustris_contig115.1156.1 ID=prot_P-lacustris_contig115.1156.1|Name=mRNA_P-lacustris_contig115.1156.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=195bp MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGKFKKVPGIPPSback to top mRNA from alignment at P-lacustris_contig115:111619..115457- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig115.1156.1 ID=mRNA_P-lacustris_contig115.1156.1|Name=mRNA_P-lacustris_contig115.1156.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=3839bp|location=Sequence derived from alignment at P-lacustris_contig115:111619..115457- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig115:111619..115457- >mRNA_P-lacustris_contig115.1156.1 ID=mRNA_P-lacustris_contig115.1156.1|Name=mRNA_P-lacustris_contig115.1156.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1170bp|location=Sequence derived from alignment at P-lacustris_contig115:111619..115457- (Pleurocladia lacustris SAG_25_93)back to top |