mRNA_P-lacustris_contig115.1152.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig115.1152.1
Unique NamemRNA_P-lacustris_contig115.1152.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig115.1152.1 vs. uniprot
Match: A0A6H5L4S6_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4S6_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 4.930e-126
Identity = 205/287 (71.43%), Postives = 224/287 (78.05%), Query Frame = 2 
Query:  695 FAGSTRSIAASGSLVYEGERAVHEHLQFHFGSPDQVLPYDCGPTEALDFPKRCAKLCVEALEKPETSPPLPPST--ERE----LGAGGGGQTSNAGAYLSRKRPFRALDVGCAVGGMTFELTRTFDEVVGVDFSASFVQAAERMRAEGRTEYVCLEEGSVVFRREAVLPEGTVPSRARFSQGDACSLDLNTLGAFDVVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLEEYTPPSEWLGGFREEKRGDADDQGG--------LRG*LRSDSVADGSRRC 1513
            F  + RS AASGS+VYEGERAVHE+LQFHFGSPD+VLP+DCGP +AL FPKRCA LC EAL   ETSPP P S+  ERE     G GG GQT  AG   S +RP RALDVGCAVGG+TFELTR FDEVVGVDFSASFV+AAERMR EGRT+Y  L++GS VFRREA LPEGTVPSRA FSQGDACSLD+  LG+FD VLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWL+EYTP SEWLGGFRE   GDA  Q G        +R  + +D      RRC
Sbjct:   46 FVDAARSTAASGSVVYEGERAVHEYLQFHFGSPDEVLPHDCGPVDALGFPKRCASLCAEALVTTETSPPPPLSSSPEREKDQLTGEGGEGQTPKAGR--SNRRPLRALDVGCAVGGITFELTRAFDEVVGVDFSASFVEAAERMRVEGRTQYEYLDQGSAVFRREAFLPEGTVPSRASFSQGDACSLDVKALGSFDAVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLKEYTPTSEWLGGFREG--GDAGKQEGEYVDSFDRIRSIMEADDAFGLERRC 328
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BLAST of mRNA_P-lacustris_contig115.1152.1 vs. uniprot
Match: A0A835YQ70_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ70_9STRA)

HSP 1 Score: 245 bits (626), Expect = 2.750e-71
Identity = 128/238 (53.78%), Postives = 154/238 (64.71%), Query Frame = 2 
Query:  704 STRSIAASGSLVYEGERAVHEHLQFHFGSPDQVLPYDC-GPTEALDFPKRCAKLCVEALEKPETSPPLPPSTERELGAGGGGQTSNAGAYLSRKRPFRALDVGCAVGGMTFELTRTFDEVVGVDFSASFVQAAERMRAEGRTEYVCLEEGSVVFRREAVLPEGTVPSRARFSQGDACSLDLNTLGAFDVVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLEEYTPPSEWL 1414
            + RS  ASGS VYE  RAV E+LQFHFGS + V+P    GP +A++FP RCA+LC+EA+           +  R  G+GG G               RALDVGCAVGG T EL   FDEVVG+DFS +FV AAE MR  G   Y  L EG V     A  P+G   +R +F +GDAC+L++  LG FD VLASNLLCRLP PR+FLG LP LV+PGG AV++SPYSWL+EYTP SEWL
Sbjct:   41 TVRSTTASGSAVYESSRAVDEYLQFHFGSAEDVMPRGAAGPPDAINFPTRCARLCIEAVA----------AHGRGSGSGGSGG-------------LRALDVGCAVGGATLELAHGFDEVVGIDFSQAFVDAAEAMRTRGEAPYKSLVEGDVFRDAVAKAPQGVDVTRVKFERGDACNLNIAALGQFDAVLASNLLCRLPAPRAFLGALPRLVRPGGAAVIVSPYSWLQEYTPRSEWL 255
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BLAST of mRNA_P-lacustris_contig115.1152.1 vs. uniprot
Match: W4GNN7_9STRA (Methyltransf_11 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNN7_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.710e-62
Identity = 115/239 (48.12%), Postives = 141/239 (59.00%), Query Frame = 2 
Query:  704 STRSIAASGSLVYEGERAVHEHLQFHFGSPDQVLPYDCGPTEALDFPKRCAKLCVEALEKPETSPPLPPSTERELGAGGGGQTSNAGAYLSRKRPFRALDVGCAVGGMTFELTRTFDEVVGVDFSASFVQAAERMRAEGRTEYVCLEEGSVVFRREAVLPEGTVPSRARFSQGDACSLDLNTLGAFDVVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLEEYTPPSEWLGG 1420
            STRS  ASGS VYE +RA HE+LQFHFG   +V+PY   P +AL F  RC +  V  L K                                 R  RAL+VGCAVG  +FEL R FDEVVG+DFS  F++ A  ++A G  EY  L +G V   R A +      S+  F+QGDAC+LD   LG+FD+V ASNLLCRLP+P+ FL  LP+LV+P G+  LISPYSWLEEYTP   W+GG
Sbjct:   12 STRSTTASGSTVYESDRAAHEYLQFHFGDSSEVVPYSFTPADALQFLPRCVQDSVTHLPK-------------------------------EHRRQRALEVGCAVGRSSFELARHFDEVVGIDFSHHFIEVANGIKATGSAEYEALIQGDVKQTRLAKVAADIDRSKVTFTQGDACNLDTTALGSFDLVFASNLLCRLPQPKQFLDALPSLVRPNGLLALISPYSWLEEYTPKEHWIGG 219
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BLAST of mRNA_P-lacustris_contig115.1152.1 vs. uniprot
Match: A0A024TN22_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TN22_9STRA)

HSP 1 Score: 218 bits (555), Expect = 9.500e-62
Identity = 113/239 (47.28%), Postives = 144/239 (60.25%), Query Frame = 2 
Query:  704 STRSIAASGSLVYEGERAVHEHLQFHFGSPDQVLPYDCGPTEALDFPKRCAKLCVEALEKPETSPPLPPSTERELGAGGGGQTSNAGAYLSRKRPFRALDVGCAVGGMTFELTRTFDEVVGVDFSASFVQAAERMRAEGRTEYVCLEEGSVVFRREAVLPEGTVPSRARFSQGDACSLDLNTLGAFDVVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLEEYTPPSEWLGG 1420
            STRS  ASGS VYE +RA HE+LQFHFG    V+P+   P++AL+F  RC +  V  L K                               + R  RAL++GCAVG  +FEL+R FDEVVG+DFS  F++ A  M+ +G  EY  L +G +   R A +      S+  F+QGDAC+LD+  LGAFD+V ASNLLCRLP+P+ FL  LP+LV+  GV  LISPYSWLEEYTP   W+GG
Sbjct:   12 STRSTTASGSTVYESDRAAHEYLQFHFGDSKDVVPWAFAPSDALNFLPRCVEDTVGHLPK-------------------------------QNRRQRALEIGCAVGRSSFELSRHFDEVVGIDFSHHFIEVANAMKLKGTAEYEALLQGDIKESRVAKVAADIDRSKVTFAQGDACNLDVAELGAFDLVFASNLLCRLPEPKQFLATLPSLVRSDGVLALISPYSWLEEYTPKEHWIGG 219
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BLAST of mRNA_P-lacustris_contig115.1152.1 vs. uniprot
Match: A0A250XJL9_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XJL9_9CHLO)

HSP 1 Score: 217 bits (552), Expect = 5.300e-61
Identity = 110/243 (45.27%), Postives = 149/243 (61.32%), Query Frame = 2 
Query:  704 STRSIAASGSLVYEGERAVHEHLQFHFGSPDQVLPYDCGPTEALDFPKRCAKLCVEALEKPETSPPLPPSTERELGAGGGGQTSNAGAYLSRKRPFRALDVGCAVGGMTFELTRTFDEVVGVDFSASFVQAAERMRAEGRTEYVCLEEGSVVFRREAVLPEGTVPSRARFSQGDACSLDLNTLGAFDVVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLEEYTPPSEWLGGFREE 1432
            ST S A  G+  YE  +AV E+LQFHFG+   ++PY  GP EAL FP RCA LC               +  +++       T   G  L       ALD+GCAVGG TFEL R+F  V+G+D+S SFV AA+ M+  G  +Y+ + EG +  +  A +P     +RA+F QGDAC+L  N L  FD +LA+NL+CRLP+P  F   LP+LVKPGGVAV+ISP+SWL  +TP S+W+GG+ ++
Sbjct:   32 STTSSAGGGAAAYETVKAVDEYLQFHFGTDQDIMPYSNGPKEALKFPARCAALCERHC-----------AALQDI-------TGERGETL-------ALDIGCAVGGATFELARSFSNVLGIDYSQSFVDAAQEMKEVGSRDYIAVVEGEITRKYTATVPSDIERARAKFMQGDACALPSN-LSKFDAILAANLVCRLPEPMEFFERLPSLVKPGGVAVIISPHSWLPAWTPKSKWIGGYNKD 248
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BLAST of mRNA_P-lacustris_contig115.1152.1 vs. uniprot
Match: V9DZU2_PHYPR (Methyltranfer_dom domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=V9DZU2_PHYPR)

HSP 1 Score: 212 bits (539), Expect = 1.500e-59
Identity = 109/242 (45.04%), Postives = 141/242 (58.26%), Query Frame = 2 
Query:  704 STRSIAASGSLVYEGERAVHEHLQFHFGSPDQVLPYDCGPTEALDFPKRCAKLCVEALEKPETSPPLPPSTERELGAGGGGQTSNAGAYLSRKRPFRALDVGCAVGGMTFELTRTFDEVVGVDFSASFVQAAERMRAEGRTEYVCLEEGSVVFRREAVLPEGTVPSRARFSQGDACSLDLNTLGAFDVVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLEEYTPPSEWLGGFRE 1429
            S RS  ASGS VYE  RAVHE++QFH+  P  V+PY   P +AL F  R  + C +          L PS +                       +RALD+GCAVG  TFEL++ +DE VG+DFS  FV AA++M+ +G  EY    +G +   R A LP+G  P    F QGDAC+L   TLG FD V ASNLLCRLP+P+ FL ++   + PGG+  L+SPYSWLEEYT   +W+GG R+
Sbjct:    9 SVRSTTASGSSVYESARAVHEYIQFHYEEPSTVVPYSFAPLDALQFLPRTVERCAK----------LTPSAQH----------------------YRALDIGCAVGRATFELSKYYDEAVGIDFSQHFVDAAKQMKEKGAMEYEAHIQGDIHEVRRAKLPQGAKPPNVVFLQGDACNLS-PTLGKFDAVFASNLLCRLPEPKKFLMEIGGFINPGGILALVSPYSWLEEYTAKDKWIGGVRD 217
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BLAST of mRNA_P-lacustris_contig115.1152.1 vs. uniprot
Match: K3X4G4_GLOUD (Methyltransf_11 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4G4_GLOUD)

HSP 1 Score: 212 bits (539), Expect = 1.800e-59
Identity = 114/248 (45.97%), Postives = 141/248 (56.85%), Query Frame = 2 
Query:  698 AGSTRSIAASGSLVYEGERAVHEHLQFHFGSPDQVLPYDCGPTEALDFPKRCAKLCVEALEKPETSPPLPPSTERELGAGGGGQTSNAGAYLSRKRPFRALDVGCAVGGMTFELTRTFDEVVGVDFSASFVQAAERMRAEGRTEYVCLEEGSVVFRREAVLPEGTVPSRARFSQGDACSLDLNTLGAFDVVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLEEYTPPSEWLGGFREEKRG 1441
            A + RS  ASGS+VYE ERAVHE+LQFHFG P +V PY   P +AL F       CV+ +          P+T R                       RALD+GCAVG  TFEL++ +DE VG+DFS  F   A +M+A+G  EY    +G +   R+A LPEG  P+   F QGDAC+L   +LG FD V ASNLLCRLP P  FL ++   V  GGV  LISPYSWLEEYT   +W+G   +E  G
Sbjct:   12 AAAVRSTTASGSVVYESERAVHEYLQFHFGDPTEVAPYSFAPKDALAFLPLTVDECVKHV----------PATHRR----------------------RALDIGCAVGRATFELSKHYDEAVGIDFSHHFADTANKMKAQGELEYEAHIQGEIRELRKAKLPEGVRPANVSFQQGDACNLS-PSLGKFDAVFASNLLCRLPDPEKFLTEVGGFVNQGGVLALISPYSWLEEYTAKDKWIGARVDEATG 226
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BLAST of mRNA_P-lacustris_contig115.1152.1 vs. uniprot
Match: A0A1V9ZAP1_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAP1_9STRA)

HSP 1 Score: 211 bits (538), Expect = 2.150e-59
Identity = 112/242 (46.28%), Postives = 143/242 (59.09%), Query Frame = 2 
Query:  704 STRSIAASGSLVYEGERAVHEHLQFHFGSPDQVLPYDCGPTEALDFPKRCAKLCVEALEKPETSPPLPPSTERELGAGGGGQTSNAGAYLSRKRPFRALDVGCAVGGMTFELTRTFDEVVGVDFSASFVQAAERMRAEGRTEYVCLEEGSVVFRREAVLPEGTVPSRARFSQGDACSLDLNTLGAFDVVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLEEYTPPSEWLGGFRE 1429
            STRS  ASGS+VYE ERA  E+LQFH+G P++V+PY   P EAL F  R     V+ L +P+                                  RAL+VGC+VG  +FEL+RTFDEV+G+DFS  F+  A +M+  G   Y    +G +   R A +PEG   S+  F QGDAC+L  + LGAFDVV ASNLLCR+P+PR FL  LP++VK  G+  L+SPYSWLEEYTP   W+G   E
Sbjct:   14 STRSTTASGSMVYESERAAMEYLQFHYGKPEEVVPYPFAPKEALSFLSRTVTDTVK-LSRPDMR-------------------------------HRALEVGCSVGRSSFELSRTFDEVIGIDFSQHFIDVANQMKDNGSALYEAHIQGDIKATRVAQVPEGIDRSKVHFEQGDACNLGAH-LGAFDVVFASNLLCRVPEPRVFLARLPSVVKKDGILALVSPYSWLEEYTPKEHWIGATPE 222
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BLAST of mRNA_P-lacustris_contig115.1152.1 vs. uniprot
Match: A0A3F2RI76_9STRA (Methyltransf_11 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RI76_9STRA)

HSP 1 Score: 210 bits (535), Expect = 4.810e-59
Identity = 110/244 (45.08%), Postives = 140/244 (57.38%), Query Frame = 2 
Query:  698 AGSTRSIAASGSLVYEGERAVHEHLQFHFGSPDQVLPYDCGPTEALDFPKRCAKLCVEALEKPETSPPLPPSTERELGAGGGGQTSNAGAYLSRKRPFRALDVGCAVGGMTFELTRTFDEVVGVDFSASFVQAAERMRAEGRTEYVCLEEGSVVFRREAVLPEGTVPSRARFSQGDACSLDLNTLGAFDVVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLEEYTPPSEWLGGFRE 1429
            A S RS  ASGS VYE ERAVHE+LQFH+G P  V P+   P +AL+F  R  + C +          L PST                         RALD+GCAVG  TFEL++ +DE VG+DFS  FV AA+ M+ +G  EY    +G +   R   LP+G  P    F QGDAC+L    LG FD V A+NLLCRLP+P+ FL ++   +  GG+  L+SPYSWLEEYTP  +W+GG R+
Sbjct:    2 ATSVRSTTASGSAVYESERAVHEYLQFHYGEPATVAPFSFAPQDALNFLPRTVERCAK----------LAPSTHHG----------------------RALDIGCAVGRATFELSKYYDEAVGIDFSQHFVDAAKLMKEQGEMEYEAHIQGDIHKVRRVKLPDGAKPRDVIFQQGDACNLS-PALGKFDAVFATNLLCRLPEPQKFLTEIGGFINSGGILALVSPYSWLEEYTPKEKWIGGVRD 212
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BLAST of mRNA_P-lacustris_contig115.1152.1 vs. uniprot
Match: A0A7S4VYW9_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VYW9_9DINO)

HSP 1 Score: 211 bits (538), Expect = 5.010e-59
Identity = 113/237 (47.68%), Postives = 144/237 (60.76%), Query Frame = 2 
Query:  710 RSIAASGSLVYEGERAVHEHLQFHFGSPDQVLPYDCGPTEALDFPKRCAKLCVEALEKPETSPPLPPSTERELGAGGGGQTSNAGAYLSRKRPFRALDVGCAVGGMTFELTRTFDEVVGVDFSASFVQAAERMRAEGRTEYVCLEEGSVVFRREAVLPEGTVPSRARFSQGDACSLDLNTLGAFDVVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLEEYTPPSEWLGG 1420
            RS AASGS+VYEG+RAV E+LQFH+   ++ LPY  GP EALDFP R A L                                A A+    R   A DVGC+VG  TFELTRT+D VVGVDFS +FV AA+ ++ +G   Y  +E+ ++  +R A +PEG +P RA F QGDAC+L    +G  D + A+NLLCRLP+P +FL    A V+PGG+ VL SP+SWLEEYT   +WLGG
Sbjct:   41 RSTAASGSIVYEGQRAVDEYLQFHYAPKEEALPYAFGPREALDFPARVAAL--------------------------------AAAHARPDRRGLAYDVGCSVGRGTFELTRTYDRVVGVDFSHAFVNAAQGIKNQGELAYEAVEQATLSSQRVARVPEGALPERAEFKQGDACNL--GDIGEVDCIHAANLLCRLPEPLAFLEKAIAAVRPGGLLVLASPFSWLEEYTSREKWLGG 243
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig115.1152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4S6_9PHAE4.930e-12671.43Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A835YQ70_9STRA2.750e-7153.78S-adenosyl-L-methionine-dependent methyltransferas... [more]
W4GNN7_9STRA1.710e-6248.12Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A024TN22_9STRA9.500e-6247.28Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A250XJL9_9CHLO5.300e-6145.27Methyltransf_11 domain-containing protein n=1 Tax=... [more]
V9DZU2_PHYPR1.500e-5945.04Methyltranfer_dom domain-containing protein n=11 T... [more]
K3X4G4_GLOUD1.800e-5945.97Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A1V9ZAP1_9STRA2.150e-5946.28Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A3F2RI76_9STRA4.810e-5945.08Methyltransf_11 domain-containing protein n=3 Tax=... [more]
A0A7S4VYW9_9DINO5.010e-5947.68Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig115contigP-lacustris_contig115:69361..75625 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.0
Seed ortholog evalue4.7e-106
Seed eggNOG ortholog2880.D8LPQ6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Methyltransferase domain
EggNOG OGs28JWG@1,2QSAN@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2276
Cds size831
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815456.2671683-UTR-P-lacustris_contig115:69360..700031622815456.2671683-UTR-P-lacustris_contig115:69360..70003Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig115 69361..70003 +
1693493550.0445223-UTR-P-lacustris_contig115:69360..700031693493550.0445223-UTR-P-lacustris_contig115:69360..70003Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig115 69361..70003 +
1622815456.3477113-UTR-P-lacustris_contig115:74448..744581622815456.3477113-UTR-P-lacustris_contig115:74448..74458Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig115 74449..74458 +
1693493550.1350558-UTR-P-lacustris_contig115:74448..744581693493550.1350558-UTR-P-lacustris_contig115:74448..74458Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig115 74449..74458 +
1622815456.359134-UTR-P-lacustris_contig115:74833..756251622815456.359134-UTR-P-lacustris_contig115:74833..75625Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig115 74834..75625 +
1693493550.1446347-UTR-P-lacustris_contig115:74833..756251693493550.1446347-UTR-P-lacustris_contig115:74833..75625Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig115 74834..75625 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815456.2774065-CDS-P-lacustris_contig115:70003..701491622815456.2774065-CDS-P-lacustris_contig115:70003..70149Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 70004..70149 +
1693493550.0561385-CDS-P-lacustris_contig115:70003..701491693493550.0561385-CDS-P-lacustris_contig115:70003..70149Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 70004..70149 +
1622815456.287862-CDS-P-lacustris_contig115:70377..706451622815456.287862-CDS-P-lacustris_contig115:70377..70645Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 70378..70645 +
1693493550.0697417-CDS-P-lacustris_contig115:70377..706451693493550.0697417-CDS-P-lacustris_contig115:70377..70645Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 70378..70645 +
1622815456.3038435-CDS-P-lacustris_contig115:72179..722441622815456.3038435-CDS-P-lacustris_contig115:72179..72244Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 72180..72244 +
1693493550.0812666-CDS-P-lacustris_contig115:72179..722441693493550.0812666-CDS-P-lacustris_contig115:72179..72244Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 72180..72244 +
1622815456.3159003-CDS-P-lacustris_contig115:73088..732591622815456.3159003-CDS-P-lacustris_contig115:73088..73259Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 73089..73259 +
1693493550.089708-CDS-P-lacustris_contig115:73088..732591693493550.089708-CDS-P-lacustris_contig115:73088..73259Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 73089..73259 +
1622815456.3266673-CDS-P-lacustris_contig115:73541..736531622815456.3266673-CDS-P-lacustris_contig115:73541..73653Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 73542..73653 +
1693493550.0976884-CDS-P-lacustris_contig115:73541..736531693493550.0976884-CDS-P-lacustris_contig115:73541..73653Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 73542..73653 +
1622815456.336208-CDS-P-lacustris_contig115:74379..744481622815456.336208-CDS-P-lacustris_contig115:74379..74448Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 74380..74448 +
1693493550.1141415-CDS-P-lacustris_contig115:74379..744481693493550.1141415-CDS-P-lacustris_contig115:74379..74448Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig115 74380..74448 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig115.1152.1prot_P-lacustris_contig115.1152.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig115 70004..74448 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig115.1152.1

>prot_P-lacustris_contig115.1152.1 ID=prot_P-lacustris_contig115.1152.1|Name=mRNA_P-lacustris_contig115.1152.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=277bp
MSTTSNSNSNSNSNSNSFAGSTRSIAASGSLVYEGERAVHEHLQFHFGSP
DQVLPYDCGPTEALDFPKRCAKLCVEALEKPETSPPLPPSTERELGAGGG
GQTSNAGAYLSRKRPFRALDVGCAVGGMTFELTRTFDEVVGVDFSASFVQ
AAERMRAEGRTEYVCLEEGSVVFRREAVLPEGTVPSRARFSQGDACSLDL
NTLGAFDVVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLEEY
TPPSEWLGGFREEKRGDADDQGGLRG*
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mRNA from alignment at P-lacustris_contig115:69361..75625+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig115.1152.1 ID=mRNA_P-lacustris_contig115.1152.1|Name=mRNA_P-lacustris_contig115.1152.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=6265bp|location=Sequence derived from alignment at P-lacustris_contig115:69361..75625+ (Pleurocladia lacustris SAG_25_93)
ATAAAAACACTTGCATCTCCGCTTGTTCTTTAAAGAACATGCGTATGCTG
CTTGTTTCTCATCCTTGAGTCTTCAGTTCGAGATAGTCTACTGCGGTTCT
GGAACGCAAAGTCGTGGTGGGACTCTCTCCTTGGACATTTCGAGTACGCA
AGAGGAGCCATTGCACTGGATAGGGGCCCCAACGGCGGTATTTGGTCTCA
ACACCCCTAAATCCGCAAAATCCCATTCCCTACTTGTACAGTAGTGTATG
CTTGCACAGATCCAGGGACACGCCATCCGTAAGTTCTTGTACACCTCGCC
TGTTTCCAGCTCCCAGCCTTACCTTCCGCCTTCGAAACTATGTAGATTGT
CATTCGATGGCTCGATGGCCCAGGGTTTGCAGCCGTCTGTCGGCTCGAAC
CTGGGATACAACCGCGATGGCTGACTGCCGTGAGAGGTGGCTTTTGTGGT
GATGCGGACCCACTAGCATGACGTTTTCTCATCTACTCCTACTGCTCGAC
GACCCATCCAAGCCAAGGGCAAGACGCACTTGCGAGGTGTACAAGTACAG
TTCTATGGCAGCCAGGAGCAGTTAGCCTGCTTCGATCCAACAACAACCAC
CGTCATAAAGATTGAAATCAATCTCCGTCACACGACGAGCAGAATGTCGA
CGACAAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACTCATTCGCT
GGGTCGACCAGGAGCATCGCGGCGAGCGGTTCCTTGGTGTACGAGGGGGA
GCGGGCGGTTCACGAACACCTACAATTCCATTTTGGAAGGTGAGGCACGG
GCTCAAGACTACTTGGCGTGTTATCATGGCTCCAAGACTGCAAGATACTA
GCTCTTGATCTTTAGAACTTACAATACCTGAAACTGGGAGATCAAAGTTC
CTTACCCCCGCTTCCTCTCCTTTGCCTTGCAACCATAACAAAAAAAAGTT
CATTTTTTTGTATGTCACGTGTGTCCGCAAAACAACTGCAATTCCTGCTG
TCTTTGCTTCGCTCAAGCCCCGATCAAGTCCTTCCATACGACTGCGGGCC
AACGGAGGCCCTAGACTTTCCGAAGCGATGCGCAAAACTCTGCGTGGAGG
CGCTGGAGAAGCCCGAGACATCGCCACCGCTGCCGCCGTCGACGGAAAGA
GAGCTAGGTGCCGGAGGCGGAGGGCAAACGTCGAACGCGGGGGCATATCT
CTCTCGTAAACGTCCCTTTCGCGCGCTCGACGTTGGGTGTGCAGTTGGGG
GAATGACGTTCGAGCTGACGCGGACGTTCGATGAGGTGAGGGGTGAGGTG
TGAGGTGTGAGGTGGAGTAGGAACGGGGTACTGAAAACGAATGAATGCGA
ATGCGCGTGCGAACGACAACGTGGAAGGATTTAACTGACTGAGCGGCGGC
GACGGTTTTCGTTGTCTCTTGACTTGATTGGATTGGATTGATGGTGTTTA
CATATTACGAATCGGCGTTCTTTCACCCGTTCCTAGGCTTTTGGCACTGT
TTGAAAAGTGCAAGTATAGTCCGTGCACCACAATTTGTCCAATACGTTTT
GTGGATAACTTTTTTTGGAAAAAGAATTGGAACGCGAAACAACGATAGTC
GTGACCGCCTCGTCGAGATACGTCGATAGCTGCAGAGTTTTTTGATTTTG
GCGAAAGGCAACATTTTTGGCCGAAACGATCCACGGTGCCCCCTAAATAC
GAACATACCCCCTATTATCTTCACGGGCCCCCTAACCACCCCCATTACCC
CCATGACCCCCCTTACCCTGTGCAGTATCACTTTATACTATACACCACAG
ATACCATAAAGAAGAACGCTTGATCGACAACACCCTCAAAGGCCAAACAC
ATCACCGCTTCCATACATTTGACATATCTCTGTACGTACACACACACACA
TACATACATACGTACACACATGGTGCGGCACAACGGCACAACAAAGTGTC
GAATATCTCGAGAACCAGATTTTTCCCAGCAAAAACAAAAAATACCGACC
TAGATATTGAGGAGAGGAATCGTTTGGTGCTGTTTATTTTGAAATCGTTC
GGTTGGTTATCGCACAAAAAAAAATTACAAGTTGACCCTCTAGAATCGGT
TTTTGAGGGATATCTGCGTCAATTTTCAGAAATAAAAAAAAAATAAAAAA
AACGGACCTGGCAAATTGCGAGATCTGTTCAAATCCGTTGAGTTTTTTTG
AATCGGCAAACAACACCCCCCAGGAAAAAGTATACAAGTTTTCCCGTTTT
TTTTGCAGATGAAAAGTCGAAGAAAAAAAATGCAAAAAAACGCTCCGTCA
CGCGACGCGCCTGGAAACAGGGCGTTTGCCGGTACTTTCAGATTTCGGAA
CAACCATCTGTGTGCAGAGAAAAGTTGTCATTTGTGCTGGGGAAAATTTT
GGACAAATTGTTGTGCACGGACCGTATTAATCCCTTTCGTGGTGTGGCCG
TGAAAGATGTAAACCAATCAACACTCTAATATCCAAAATCCGAAGCTTCG
CACGAGCGCGAAAGCATCTCCAGTCCTTCCCCCCCTCCTCTGCTCTCTCG
AAGCTGCCGATTGTGTCTGTCTGTACTTGTATCCATCCCTCTTTTATTTT
CTTTTTATGGCCTGCCTCGGTCCGCGTGTTGTTTCCTCCGCCGGTATAAC
AAAACTGCTACTGCTGTCTTGCAGCTGCCTTGGTTCTGATCTATTTTTTG
GATGCTTTTGTGAGCACCCGTTGACCCGAGTTCCTTTTACCCCGTCACCC
ATTTTGGCGTCCCTTCTCCTTCCATGTCTTTGCGAACTCCGGTTGATCAC
TACCCTGCCGATGTTGCAGGTGGTTGGCGTGGACTTCTCCGCCAGTTTTG
TACAGGCCGCTGAACGGATGAGAGCGGAGGGAAGGTATAACGTAGCCTAG
CGCTTTGCCCCCGTGGAGGGGATTTCTTTTTTTTTTGTTGTGGCCCTCGG
GGTACGAACCGAGGAAGAGGGCGGAATGTATTTCTTTTCAACTAGTGACC
CTGGGGGGGAGTCTCCCCGGGGTAGGCGTCAAAAAACAATAATCTCACAC
ACAAACACCGCAATGCCAAGAAACACTCGGAAGATCGACGGCGTATGTGC
ATACATCCATTTCTTCTTTCACTCTCACTCTCTCCAGACTCCCTCCAGTG
CCGAATGAAACAACGGCGTGTACGGTGTCAAAAGTGTCAAAAGTAGAGTG
CTTCGCAGTGGTGCCCACATAACGAAAATTGGTGCTACCCCGGGGGATCT
CGTCGGAGAACACTACTACGGGGGTGAACTGAGGGAGAGGCGTAGTTGTT
TGTTTGCCTTTTCCGCGGGACAAAGACAAAGTTCAAGGTTTACAAATTTT
TCAGCCAAAACATGGATGGGATTTGGCATCATCCCGGGGGTAAGTCCAAG
GATTTTACGATTTTACGGTATACCAAAATGGCAGAGCTCGGTTTGTCTTG
TCTCGTCGTGATGTTGTGTCCCTTTCGCTCCCTTCAACGTGATCCTCAAA
CTGTTTAGGCCTTGCGCGTACCTTGTCCGCATCGCCTCTCGCTCACGAAA
CACTCTCGCGTATCTCCGTCTGCTCTTAGGATATCAGACGACAAAGGGCT
ACGTGTATCACATTTGCGCACGCCACTTGCCCTTGTGTCCGTGTTTTGCT
CGTGTCCCCGGCTGTCCCTCCACCCTCCTCTTCGCCCCTCCGCCTCGGCC
CCTTGCGTGGACAATTACATCCCTTTAGAACGGAGTATGTGTGCTTGGAG
GAAGGGTCGGTAGTCTTCCGGAGAGAGGCGGTCTTGCCGGAGGGGACGGT
TCCTTCGCGGGCCCGTTTTTCCCAAGGAGATGCTTGTTCACTGGACCTCA
ACACACTAGGAGCATTTGACGTCGTACTCGCGAGCAATCTGCTCTGCCGG
TGGGGAACCTAGCATATTTCCAGCGGAAATGTGTCGCGTAGTGGCGTGCT
TTGGAGCTGTGAGGGGGGAGTCGAGGTTAGTGTTGCTGTTACCATCTGTT
TCGGAGGTGGAATTTCTCGCTTGTGGAGAGGAGGTGGCAACGGAAGTTGA
TAGACTTTGCGTGCCTTTCCCTGTCCTCACTAATTCAACGTCGATCCTGT
CGTTGCCGTTGCCGTTGTCGTTGCTGCCGGCTCAACTGCCGCTGCTTTAC
ATGTTGACATCACATCATGTGGATACTTCAGATTGCCGAAGCCTCGATCG
TTTCTGGGAGACCTTCCCGCGCTGGTCAAGCCGGGCGGGGTGGCAGTGCT
GATATCACCCTACTCGTGGCTCGAGGAGTATACGCCTCCTTCGGTAAGAT
GAAACGGACGCTGCTGGCAATCGCAGCCATGCAAAATTTAGTCCGAGCTG
TTGGCGCCCCAACCAACGCTACCTAGTATTCTCATACACGCAGCACGTAG
AATCGACTTAGATTCAGTTGGGAAGCAGGAGGTGGGAGTGCTTAACTGGG
AGAATCCGATATGTTGTTCTGGGATACATGAGTTTATCGGGTGTAGACTT
TGTTCCTTTTTCAATCCGCACTGGGGGTGGCAGTATCAATCACGCCCGGT
TACATTGCCGCAAGTAACGCCGACATTGCATAGCATTAAAATAACTAGCT
GGAGTGACTGGCTGATGACGGATTTTTCAAACAAGCACTCCTCCAGGTTA
CAGTGACCGACGCTTCCTCAACGTTTCAATACCTCGCAGCCTGTTGCGAA
TATCGACCAAGACATGGGCATGCGCGTTTGTATATTTTCCAGCTGCTTCA
TTGTCTTGTACTGCTTCTCCACGTCTTTCCCGCCGAAACGAAACGTTTAC
CATGGGCCCGAGTCGATGCAACCCCATTTTCTCTTCACAAGAAGGCTCTA
TCTAGCAGGTTCATCGCAGATCATATCACATCATACAGCTGAACGGCGGT
GTCAAATTTCTTATCAGACACACATACAAACGGCGATTCTCACGACTTGA
TTTTGTCGGATCATCACCATCTGTTGATATCACCCTCTTCGCGTGCTCCT
TGATCCGGCGTTTGTTCAGGAGTGGTTGGGAGGCTTCCGAGAAGAAAAAA
GAGGGGACGCCGATGACCAAGGGGGACTTCGTGGATAGCTTCGATCGGGT
GAGAGCTATGTGCTTTGCCACCGTGCGAGTACCGCAAGATTAGCTGACGG
GTATCGCGTGCAACTTATCCGAGTGCGATGTTAGTGATCGAAAGAAGCAG
AATTGTCGTGTCTCGAGTCCAGGATCTGTTATGTGTATCGGCTATCGTCG
CGTTGACTTGCAGGGTTAGTGTAGGGTAGCTGAGGCCGATGTGTGTGTCC
TGTTCACGAGGCGACTTCCATCGCTCACTCACTATTACTTGTCAAGACAT
TGCACATTCGATCACATTCAGCACATTCACATCCGCCTGCCCTGGCATCA
AACCATTTAATTTGCCTAGAGATTTTCGGAACTCCCCCACCCCCCAACCC
TCCCTCGCTCGCTACCCCCACAGATTCGGTCGCTGATGGAAGTCGACGAT
GCCTTCCAGCTTGAAAGACGCCTTCCAATGCCCTTCCTTATCCGCGAACA
CGCGCGAAAGTTTCAGTGGGGGTGTTCGGATGGGACCGTGTGGCGACGGA
AGGCACGACAGTGATGGTGTGGCGAGTGGGAACTAGGATGTTGTACGGAC
CTTGACGAAACAATGTCGGGGGGTCCGGGGAGGGGACTTCGAACTTTGCC
GTGCGATGCGTCGTCTTTTTCTAGAAAAACCCACGCTTTGGCAACTCGAG
AGAAATAGAGTGCTTTCCGGGAGACCACAAGTTTGTGATGGAAAAAGCAT
ATTGAACCCGGAGCTGATGTGATTACCTACAACACCCAATACAACAATTT
GTGCGAACAAGAAGGGAAAGAGGGAAAAAGCCTCCTTCCATTCTTTTTGT
ACGATTCTGGGTGCAGTACACCCCTCGTAGAGTTCATGTTCATACGTGTA
CAGAGCTTGTCGGCGTGTCCGTCCCTCTTAAGAGCTGGAAAGTACAGTAG
AGGGAGAATGAGGCTTGCATCCAAGACAAAGAAGAAACTTATGATAGAAG
GAGGAGAACAAAGCAAGACTAGCGGTTGGTGGTGCATTGTGATTTGTTTC
CGGCCTAACGAACGGCCATACTTGCCACACATGGAGCGAGGCGAAATTTG
CCTGGTTACTGCAACTTTCAAGATTTTTTGCCTGACTGCCATACATACCT
CACGGCCCTCCCCGGCTGTATCGGACGGCACGAATGTTTTTTTCCCATAC
GCACACATTCCGGAC
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Coding sequence (CDS) from alignment at P-lacustris_contig115:69361..75625+

>mRNA_P-lacustris_contig115.1152.1 ID=mRNA_P-lacustris_contig115.1152.1|Name=mRNA_P-lacustris_contig115.1152.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1662bp|location=Sequence derived from alignment at P-lacustris_contig115:69361..75625+ (Pleurocladia lacustris SAG_25_93)
ATGTCGACGACAAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACTC
ATTCGCTGGGTCGACCAGGAGCATCGCGGCGAGCGGTTCCTTGGTGTACG
AGGGGGAGCGGGCGGTTCACGAACACCTACAATTCCATTTTGGAAGATGT
CGACGACAAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACTCATTC
GCTGGGTCGACCAGGAGCATCGCGGCGAGCGGTTCCTTGGTGTACGAGGG
GGAGCGGGCGGTTCACGAACACCTACAATTCCATTTTGGAAGCCCCGATC
AAGTCCTTCCATACGACTGCGGGCCAACGGAGGCCCTAGACTTTCCGAAG
CGATGCGCAAAACTCTGCGTGGAGGCGCTGGAGAAGCCCGAGACATCGCC
ACCGCTGCCGCCGTCGACGGAAAGAGAGCTAGGTGCCGGAGGCGGAGGGC
AAACGTCGAACGCGGGGGCATATCTCTCTCGTAAACGTCCCTTTCGCGCG
CTCGACGTTGGGTGTGCAGTTGGGGGAATGACGTTCGAGCTGACGCGGAC
GTTCGATGAGCCCCGATCAAGTCCTTCCATACGACTGCGGGCCAACGGAG
GCCCTAGACTTTCCGAAGCGATGCGCAAAACTCTGCGTGGAGGCGCTGGA
GAAGCCCGAGACATCGCCACCGCTGCCGCCGTCGACGGAAAGAGAGCTAG
GTGCCGGAGGCGGAGGGCAAACGTCGAACGCGGGGGCATATCTCTCTCGT
AAACGTCCCTTTCGCGCGCTCGACGTTGGGTGTGCAGTTGGGGGAATGAC
GTTCGAGCTGACGCGGACGTTCGATGAGGTGGTTGGCGTGGACTTCTCCG
CCAGTTTTGTACAGGCCGCTGAACGGATGAGAGCGGAGGGAAGGTGGTTG
GCGTGGACTTCTCCGCCAGTTTTGTACAGGCCGCTGAACGGATGAGAGCG
GAGGGAAGAACGGAGTATGTGTGCTTGGAGGAAGGGTCGGTAGTCTTCCG
GAGAGAGGCGGTCTTGCCGGAGGGGACGGTTCCTTCGCGGGCCCGTTTTT
CCCAAGGAGATGCTTGTTCACTGGACCTCAACACACTAGGAGCATTTGAC
GTCGTACTCGCGAGCAATCTGCTCTGCCGAACGGAGTATGTGTGCTTGGA
GGAAGGGTCGGTAGTCTTCCGGAGAGAGGCGGTCTTGCCGGAGGGGACGG
TTCCTTCGCGGGCCCGTTTTTCCCAAGGAGATGCTTGTTCACTGGACCTC
AACACACTAGGAGCATTTGACGTCGTACTCGCGAGCAATCTGCTCTGCCG
ATTGCCGAAGCCTCGATCGTTTCTGGGAGACCTTCCCGCGCTGGTCAAGC
CGGGCGGGGTGGCAGTGCTGATATCACCCTACTCGTGGCTCGAGGAGTAT
ACGCCTCCTTCGATTGCCGAAGCCTCGATCGTTTCTGGGAGACCTTCCCG
CGCTGGTCAAGCCGGGCGGGGTGGCAGTGCTGATATCACCCTACTCGTGG
CTCGAGGAGTATACGCCTCCTTCGGAGTGGTTGGGAGGCTTCCGAGAAGA
AAAAAGAGGGGACGCCGATGACCAAGGGGGACTTCGTGGATAGGAGTGGT
TGGGAGGCTTCCGAGAAGAAAAAAGAGGGGACGCCGATGACCAAGGGGGA
CTTCGTGGATAG
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