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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 457 |
| Cds size | 333 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815453.0870736-UTR-P-lacustris_contig1147:57606..57703 | 1622815453.0870736-UTR-P-lacustris_contig1147:57606..57703 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1147 57607..57703 - |
| 1693493548.1128082-UTR-P-lacustris_contig1147:57606..57703 | 1693493548.1128082-UTR-P-lacustris_contig1147:57606..57703 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1147 57607..57703 - |
| 1622815453.1217484-UTR-P-lacustris_contig1147:66013..66040 | 1622815453.1217484-UTR-P-lacustris_contig1147:66013..66040 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1147 66014..66040 - |
| 1693493548.14338-UTR-P-lacustris_contig1147:66013..66040 | 1693493548.14338-UTR-P-lacustris_contig1147:66013..66040 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1147 66014..66040 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815453.1010604-CDS-P-lacustris_contig1147:57703..57976 | 1622815453.1010604-CDS-P-lacustris_contig1147:57703..57976 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1147 57704..57976 - |
| 1693493548.1254194-CDS-P-lacustris_contig1147:57703..57976 | 1693493548.1254194-CDS-P-lacustris_contig1147:57703..57976 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1147 57704..57976 - |
| 1622815453.112038-CDS-P-lacustris_contig1147:65953..66013 | 1622815453.112038-CDS-P-lacustris_contig1147:65953..66013 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1147 65954..66013 - |
| 1693493548.1358302-CDS-P-lacustris_contig1147:65953..66013 | 1693493548.1358302-CDS-P-lacustris_contig1147:65953..66013 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1147 65954..66013 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1147.1136.1 >prot_P-lacustris_contig1147.1136.1 ID=prot_P-lacustris_contig1147.1136.1|Name=mRNA_P-lacustris_contig1147.1136.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=111bp
MKLASPQILTQGLQGKLLMKAQNVHMGRTLMSTMERREAGEVSNIMGRED TDSCNEGGTDERDSGGKGKRGGTRTKGTGAVQQYSTEGKDPVPPVNASAN RDSVTSSRRC* back to topmRNA from alignment at P-lacustris_contig1147:57607..66040- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig1147.1136.1 ID=mRNA_P-lacustris_contig1147.1136.1|Name=mRNA_P-lacustris_contig1147.1136.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=8434bp|location=Sequence derived from alignment at P-lacustris_contig1147:57607..66040- (Pleurocladia lacustris SAG_25_93) TTAGAAAAGGTTGTGGGCATTTCGTGGATGAAGCTCGCCTCTCCCCAGAT
TCTCACTCAAGGCCTACAAGGAAAGCTCCTTATGAAGGTGGGCAAGCAGG
GAAGAAGTGCTCAATACAATGGAAATGGCGATCGCAGTTCAGTCGTCGTC
ATCCAACGACAATACTCAACCATATGGCAAAGTATCCGGTGCTCAGGCTG
CGTTATCCAACCCGCAACACGCGGGGAAGGCCAAACAGCTCGGACTTGCC
CTCCGCCAAATCTCGTTGTCAGACGAACGAGCCAAGAGAAGAGTAGTCAT
CCGGGTCCAAGAGGCAAGAGGCAAAGGAGTCCAATCATGGTTGATGTTGC
AAGGACTATCACCAGAGGAGAGGATGAGCCCAGAACTCTTTCGAGAGGCT
CTTGGTCGTGGACTGAGGAGTCATGACCGAGTGGACTGTGAAAAAGGCAA
AGCCTGTGGTGCCGGTACACTGTCACAGTGTACCAAACCTGTTTGCCGCT
TCCACACAATCACTTGCACCAAGACCAGAGCGGCAACTTTCCTTCACAAC
CGAATGGCACGCGTCGTTACGAAAGCTCTACGTCTGTCAGTGTCGCATGA
AGGTTGCAGTCGTAGACTCCTAGCCCTTCATCAGGGGCACTGGTCGAGGA
AAGGGAACATATCGGATGGATCTGGTGATACCACCAGGCCTACGTGCAGG
GGAAAAGCACGAAGACTTGTCCACGAAGAAATGTCCTGATCGATGTAGTC
ATCGTTAATCCAGCAGCTGACAGGTGCCTCCCCAAATCGTTCCAAGAATC
AGGATCCGCCCTCGTCGACAGAGACACCAATAACGCAAACCACTATATGC
GGGTACTTTTGACTCGTCTAGCTTTACACTCCTTACCGTTGCTCTCTCCA
CGAATGGTGGTTTTGGCAAACGAACGGAATGTTTCATCGAATCTAGCTTT
ACACTCCTTACGGTTGCTCTCTCCACGAATGGTGGTTTTGGCAAACGAAC
GGAATGTTTCATCGAAGCTACCTCCGATTATCTGGCGCGGAGGAAGCTTA
CAACATGGGCAACTACTGTGAAGAGGCGGATTTCCTTCGTCTCAAGGCAT
CCTTGAAGAACAAAATTCGGAGACATTTTTCTTTCGTTTTTCTCCTGGTC
TTGCTCAATTCCTGTCCATGCGAACTCGTGATTTCTTCCGAGACTGTGGT
TTAGACATGGCTGAACTACCACCCCGACCGATCGGTTGGGAACTAGGTGG
AAATGGAAATGGAGGAAGAGGTGGAGGTACAGAAAGTGGTACTGGAGACG
TTTCTTCTAGAGAAGGAGGGGGGAGAAGAAGAGATGATGAAACAAGAGAT
AGCGGAGTTGAGGAGAGTACGAACTTGGATCCTGCAGATCTCCCATGCAA
CCCTCAGCAGCAGCAAGAAAACAGTTCAAGTAGGCCAAACAAAAATCCCA
TGCAGCGAAAGTAGTGATGAGGCTAACTCAGCGAAGAGAAGCAGGAGAGA
GAGAGTGTCATCTTCGCTTGCAAGTTCTTTGAATCCGGTTGGATTATCCC
CATCTGTTTCCTCCGCACCCGCCGCATCAGGGGAGACTGCTGCTTTGAAC
ATGTTTTGGGATTTTCCTGTGTCTAAGACTGACGTCTTCTCATTGGTCAA
CCGGTTAGCGCGGTGGATGCTAATACATGAAACTCACACATAAACATTTA
CTTGTGGGCGAATCGGCCTTGCGCCGGATAGGACACCGAAGGCAAGTTGA
TCACAAGTATGTTGAAAAAAGGAGCTCGCAGACATCAGTGAATATGTGAT
GTACTCAAATTGGATGTCATTGGCCGGGAGCCAACCGACCTGCCTTTTTA
ACGACGCCGTCGTTGACTCGTTTCGAATTTTTGTGCAACAATATCCTCTC
TGCCCTTGGTTTACGCAACGACTTTAAACCTCAAGACAACAGCTACATAC
ATACCTGTGAAGAGACAGCAGCACCGGGACGATCCTAATGCTCCAGATCT
CTCAAGAATTCTTCCCAAAAACGAACAGCCATCGACGAAAACAACCTGAG
TACTACATTACAACGAGCTATACGACTCTTTCTATGGGGGGAAAGCCAAA
GCCACATCTCCGCACCATAGCAACATCGACAGCAATACGGCCAACCAATG
TTGTACTTGCCAACGAATAAAGCTACACTACACCAACTTCCCATCACAGC
ATAAAATACAACCACTTCCCGTCGCTGCCGCGACGCTGCCTCGAACTGCG
CAGATATACAGAGGGAACATCCCGAACGCCTGCCACATTTAGCGAAACAC
CTATATTATTATTGTCAACGAGGGCTTCCGACGTGGGGGGCTTCCCCGTC
CTTCGCAGTATCAAGACGGATAGTTGGAATTGGCGATTCAATGATGAAAT
AGTGAAATGATGAAAAGAACGTTTCGTGGATGTATGAGGGGGCGATGCAA
TAACTGATGTAGATGTTTATAACGACGTACCAAGAGGGACAGGTTGTTGC
GTTATAGCCTTTGCTTATTAAAACGGGCTGTGTGCCTGCATGATGCAGGG
AACGCGCCTCTTTACTGTGCGACGCCCGTGTATATATTTTGTTCATGTCA
TTGAACGTTGGGTGATGGTGGCAACGGCACCCCCGTTGGGCACGTGTAAG
ATGGGAAAGTAGGGTTAGTAGCACACCGAAGTAGGCGATGTTGTTTCTCT
TCCCCCTCCCACGTCTTGGAGGCACAGTATGCAGAGGTGGGGTGGCCCTC
GGACGGTTCAGAAACGATAGCGTCGTCTTGCACGTGCTGGGGTTCCTCCA
CATGTTGTGATCGCAAGTCACAAACTTGCCGCCATTCTTCTTCTTGGCTA
TATCGAGGGGCCCGTTGGGGGGTGGAGAGAAGGCTAGGTACAGAGCCAAC
CCGGAATGACGCGCTCATGGATGACAAGGCGTTTTACGGTGGACTTTTCA
CTCTCGTTTCGGTTGCGGTTGAGGGGGGATGCCCGGGAAGGAGCATCATT
CTTGCTGCAAGTAGTCTAAGCGAACGTGATTGCTGCCACGGTCGACGAGT
GGGTGGGGTTCGTTGGAGGAGCGACCACAAGCTAAACTCCGATAAAGACG
GTTCTCTCCATCACACGGCAGGAGGAAAGACCAGTGTCATGTTTGTATCT
TTCTCCACCGGTCACGCCGCACCTGGCACGCGGCCTGCGCCTCCCGCAAC
CAGCTCACCCCCTCGTCGCTCTGCACGCAACCCCTTGGCGCGCGCTGATT
GGTGTGTACTATGGTGTACTGTGGGAGGGACTGTTCAAAAAAAAAAAAAA
AAAGTGAAAAAATGAAGGCCGCTGATTGGCCTGTACTATGGGCAGACAGG
TAATTCTATGGGCGTGCCGCCGTCGTAGGCTCGACCCCCATGGTCTTACC
TCGGCCCATAGTTAAATTAGTTTTCGCGCGAAGCGCGATTTTTTTCGAGC
TTTTTTGCCCGAAAACGACGTCTTTCACAGCCGGCAAAATGGGCATAACT
TTTGATCAAACAGGAATATATCAGCATACAGGACATCAGATTGAAGCTCA
TGAAGCCATCTACCAGAATATACGTCATTGGGAACCATCAAACAAGAACT
GTGGCCAAGAGGGCAAGCATTGAAAGTAGACCTGATCAATGTATTTCTCT
TTTGCCCACGGGTGGTAAAAGTCAGAAGCCAGCACAACAAAGCTAATGCG
GCCTACACGTTCTCCCGAAATGTATCCGACGAAAGACCGTATATATATCC
ACATACATACACCCTGCAGCTCGTTCCTTGAAAGACCACTTCTTGTCTAC
GAAAACCGAGCTGCACCCCGGGACAACCATCATCCCCGAGGCACATGCAC
TCGCCACGGAATTTCCTGACGGGCCTTTTGGCCATCGGGTTGACTTTTGT
CGCGGCGCCGAGTCTCCGGCACCGTGCCAGCAGAACATGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTATTGTCTAAACATTAAAAACCGTTCCGGTCTC
CGCTCAGTACCCTCCAATGTCCGTACTGGTCCAACTGTCGCGGGCTACTC
CTTCCGTGGCCACAGGCTGACTCCCCCACAAAGGTTACATCCCAGGAAGT
CAAAATCGCAAGAACAAGAACAAAAAGAGGTGAACTCTTAGCTACGAAGT
TTGGTGTTCAGGTGACAAGTCGGGACAAAAGGGGGGAAGTTGTAGCCCAT
CGCTCCCGCTTGACGCGCGACGCTGAGCAAAACTGGAGACAAAGTAGCAG
GAACGAAAGATAACCAAAGATCGCGAACCAGGACGCTAAATCGCATGGTT
TTATCTTTGGGCCCCTGCTAGCCCAGAGCGTATTCAGTACCGGGATCGCA
CCGGCCAGGCCATTCCCATACGCTAATATGCCAGACATCCCACGTCGTAC
TCAGTCCTAAAGGTTGCCACGTGCTGAGCATGCCGGGGGCAGGGGAAAAT
AAAGAAATACACGAATAAGTAAGAGACAAGCAATCAACGCCCACACGCTC
GAAGCAGAATACACACCGCCTTGAGGGTGGGTGCAAAGGGAAGAAAGAGA
AAAGAACAGTCAAGAACATGGAGATGACAAGAACTGATCGTGGTGACGTT
TATAGGCTCCACCTCGCATCTTGTCCCCGCACGTACGGCACTGCTGGTCC
CGTCGCTTTCCGGCCGCTGCGAGAGTAACGCCAGCGACAGCGCCAGCACC
TTGCGACGAGCCGCTGTGCGGTATACCACGTCAGCCATCGACACAAGAAA
CAAGAAGCCACGAGCGGTGAGCATAACCAGGGCTCTGCCGGGGCGGTTGC
GGCGCTCGAGCATCCATCGGCGCACAAAGCTGGCTCCTGACGGACGCTTT
CACTGTTTGAGCAATCAGGGAGGTGTCCCTCATGTTGATGTTTTTGTGGC
GCCTGTCAAGCAGGTTTGTGATGAGGTGCAAAACGGCTGTTGTAAGTAGG
ATGCATCGACCCCAGCGAAACGGGAAGGATGTGCCGAACCACGACAACAA
AGACCTTGACTATTTCTCACTTTGTCCAGCGCGCATTCAAGGATACAGCT
GGCTTCTTCAAGATGAACACCACAGTACTATTTCCGTCTTCCGTGGCAGA
TCCGGCCGGTCGTTCAACTCGAGCGCGAAGGCGTCGAAGTCGAGGAAAGA
CTGCGACCCATTCGCAGGCGTATATGTCATCTACATATCGCCGAACTTGG
TGCGCTCAACGGCAGTACTGACCGGCGCGGTGGGCACCCTACACTCGCTG
CATGCTTACGAGGAGAGACTTCAATGTGTCAGCTCCGCAAGCGGAATGGC
CTCGCTGAACTCACTGTTCCCCTGCCCGTCCCAATCGGTGTCCTCCTGCG
ATTGCACTCCCCCCCCGCCATTCCCACCCGTCCAGAACGCTCCGGACGAA
CTGCGGTCCCCCTGTCGCTGTACGCGTCGTTTCGGGAAAAAAATATAAAA
AAATAGAAACCCTGCGGTCACGCGTGAAACCACTTGTACTCAATTTGTTC
TGTTCGCCATTTGTATTCTTCTTTGAGGGAAGCTACGGAGCCGACGGAGG
AACATTTGTCGTTTTTTGAAAAAATATTCATAACATCACCGAAAGACTAC
CACCTACGAAATGCCCAGTAGACGGCTTCATTTTCATATTGCCTTTACAG
TCAAGGTTGGAATGATACCTGCCGACTATTAACTCCTCTGTGTGTGTTGA
AGTTTCTTCGCTGTGCGGCCGGAACAATTTTTTTGTAGGAGTTGTTTTGG
AAAAACAAATATGATGACTACCGAGCTGTCTTGTTGAGCTTGAAGTTGTA
CCAGGACCAGTGGAGAAACAGTAGGGTCACGATATGAATGAATCCGCGTC
GGTTGGTCACAGCACACACAGGAGTGTGTTGCGATGTTCCAAGGCCATCC
TGGGACGTATCGTGCAGCCAAATTGGTTACGTGTGTAGGTGGTGTTGCTC
TCACGGCCAGCGCACCTGTTCCGCTGCCCGAGCTCTCATTAACCCCGCAA
GCACAAAGCCTCGTGACTGGAGTACCCACTGTAAGCAAACACGAAGGACA
GAGCTACCGGCACCAGAGCAAGGCGGATGACGACTCAAGTGCGCACGCAC
AAGGACCGAATGTACACCGAAGAAAAAGAAAAAAGATCACCACTGGCCTT
CTTGCGCAGCAATGATTAGTTGCGTGTCCCAAGATTGTTAAACATCATCA
TGAGGGTAAACAGAATCGAAGATTACCGAACATTGTAGGTTAGTTAAGGT
CACAACGACACCACTGTGCGTAAGAGCAGAAACCACAGTGATTTCAAGTC
GGCTCCGTGTTTGTCCTTCGCTTATCAGTGGTTCGTTCTACCTCGCCCTA
CTATGGCCATGTTTCCGTGTTAGATGATGAGCGGAATGCATCGATCCGTC
CGGGCACCGATCGAACAGGTCTATACACTTCAAATTCATCCTCGTTCAGG
CGAAGCACGGCTGACGGCGAAGAAAGACTAACACACACGAAAAGCATGTT
TCGTTCACCTTGTCCGTTACTTGAGCGGCGATGGTGGAAGACTTGATTCA
GGCGTGCCGACCTCATGATGTCTCCGAATTTCTTGCTTTTGGGCCATCGT
ACAGGCGAACACTCGACGTGTCTTTGCGAGCCGCGAGGCTGTTTCGGAGT
GGTGGACGCCGTCCGAGTTGTCATCGCACGTAGACCCCAGTAGTTGTCGT
CGTCGTTCTCCTGGTGATGTCCGTCCCACTCGTCGCCATGGCTTGATGAT
GCCAGAGCCCTTGATACTCTCCATGGCACATCGCCATCGTCGTCCGGCCG
ACTTCTCGAGCTGAATATTCTCCAATGCACACCAGCTGATACCGATGTGG
AGGGAGACCCCTGCCGCCCGCGATGCGTCAGACACCACAATGTGGGCGTG
AACGACGAACATCGTTGCCAGCCTTACTGAAACTGCTGGACGGAAACTCT
AACAAACTAGTGGCGGCCGTTCGATACAAGTTGCGCCTAACTTCCTCTTG
AGTTCATATTGGCAGCTTTGCAACGTGGACTGCCTTGCAGGAAGTACTTT
GCGGTGCTTGTCAACCTCATCAGGAGAAGCCGTGTCCGTGACGAGATGAG
CTCCACCCATATCTTCAACGGCGCGTGTATTTATATTACCGCTGGCGTCG
GTCGGAAGACAATGGCGATGTGCCATGGAGAGTCTCAAGGTTTCTGGCAT
CATCAGGCCGTGGCGACGAGTGGGACGGACATCACTAGGAGGACGACGAC
AAAAGCTACTGAGGGCCTGCGTACGATGAAAACTCGAACGGCGTCCACCA
CTCCGAAACAGCCGCACGGCTCGCGAAGACAGAGCGGCTTCCGACCGGTG
TCGAGTGTACGCCTGTATGATGGCCAAGAGCAAGGAATTCGGAGACATCA
TGAGGACCCCTGAATCAAGCGCTTCCTCTACCAGAGAAGGTTGGGGAGCA
CGTGAGCTTCCTCTTAATGTCGTCAGGGGCCGAGGGGAAACACTGAGGGG
AAACACTGACATGAATCCTGCCAAGCCACCCCAGAAGGGCAGCCCGAAGA
AGAAGGACGCCAAAACCCACAGCCTCTTAGGACCGGCGTCAAGGTGGAAC
CTCGCAACCCTCAGCGGCAGCGAGGAACCTCGCTTCAGACATGGAGGTCT
AGGGACTTCGGAGGGGAGGCACGGCTACAATCAGCAGAACAGGGGAGCCA
AACTAATCCTAATAGCAGTGCCAATGATGATGCGGTTTCCTCTACCCCAC
CCCCCTCCTCCACACACAAATCAAATATATACAAGGACACACCTCTTCTC
TGACTGCTGCTGCCACTGCCGCTGGATACGCACACAGAGTGTGCACGTAC
AACAGTGCTCATAGCCCCTCTCGCTCGCTCGCACACACCCCTCCTAAATA
GAAAAACAACAGCAACAGAACACAGCAACAAATACGAAACACGAGTACAA
ACAACAAACCCCTCCGTCATATCACAACGCTGCCCCTCGTACCCCTCGCG
CACGTCAAGCAAGTAGGCCCCACGCCACCTGTTTCCCCTACGTATTTTGT
GCTCCCCATAAAAGGCGCAAAACGTGCACATGGGCCGTACACTTATGAGT
ACAATGGAGCGAAGGGAGGCGGGTGAAGTCTCCAATATTATGGGGCGAGA
AGACACGGACAGCTGTAACGAAGGCGGCACGGATGAGAGGGACAGTGGGG
GGAAAGGAAAACGGGGAGGGACCCGGACGAAGGGCACGGGTGCGGTTCAG
CAGTACTCGACGGAAGGAAAGGATCCGGTCCCTCCCGTGAACGCAAGCGC
AAACAGGGATTCGGTGACCTCTTCCCGTAGGTGCTGATTCTATTGCGGTT
TTCGTGCTTGTTTAGCTCATCCTTGCTGAACGCTTATGGCGGCTTCCATT
TTTTGTGCGTGTATTGTCGTGAGTGGTCCTGACG back to topCoding sequence (CDS) from alignment at P-lacustris_contig1147:57607..66040- >mRNA_P-lacustris_contig1147.1136.1 ID=mRNA_P-lacustris_contig1147.1136.1|Name=mRNA_P-lacustris_contig1147.1136.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=666bp|location=Sequence derived from alignment at P-lacustris_contig1147:57607..66040- (Pleurocladia lacustris SAG_25_93) ATGAAGCTCGCCTCTCCCCAGATTCTCACTCAAGGCCTACAAGGAAAGCT CCTTATGAAGATGAAGCTCGCCTCTCCCCAGATTCTCACTCAAGGCCTAC AAGGAAAGCTCCTTATGAAGGCGCAAAACGTGCACATGGGCCGTACACTT ATGAGTACAATGGAGCGAAGGGAGGCGGGTGAAGTCTCCAATATTATGGG GCGAGAAGACACGGACAGCTGTAACGAAGGCGGCACGGATGAGAGGGACA GTGGGGGGAAAGGAAAACGGGGAGGGACCCGGACGAAGGGCACGGGTGCG GTTCAGCAGTACTCGACGGAAGGAAAGGATCCGGTCCCTCCCGTGAACGC AAGCGCAAACAGGGATTCGGTGACCTCTTCCCGTAGGTGCTGAGCGCAAA ACGTGCACATGGGCCGTACACTTATGAGTACAATGGAGCGAAGGGAGGCG GGTGAAGTCTCCAATATTATGGGGCGAGAAGACACGGACAGCTGTAACGA AGGCGGCACGGATGAGAGGGACAGTGGGGGGAAAGGAAAACGGGGAGGGA CCCGGACGAAGGGCACGGGTGCGGTTCAGCAGTACTCGACGGAAGGAAAG GATCCGGTCCCTCCCGTGAACGCAAGCGCAAACAGGGATTCGGTGACCTC TTCCCGTAGGTGCTGA back to top
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