mRNA_P-lacustris_contig1145.1125.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1145.1125.1 vs. uniprot
Match: D7FQ57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ57_ECTSI) HSP 1 Score: 1039 bits (2687), Expect = 0.000e+0 Identity = 648/1029 (62.97%), Postives = 739/1029 (71.82%), Query Frame = 1
Query: 70 MERELASEIKGSLEESRALREKFQEDLECVQQDAQRRLVERKAKWKEHALCMEQEKADAILQAELLQQQLVDSAREVRLARERMFQLESEAQSIRSSPPQVVERADPGTVVEIMQLREKMAATEEQARRAQRTAAEAREAVGRESAINQGFQRDVDNARHRLLTVQGSLAELSEENAKLRRELENERIKTVAGSRRLADAVQRQDDARSEVRRDSVQLREQRDRLAQDTAVLGIKLHQMKKKHAAGRLLHALSQTRHCSLARALRALIVGVTNDIHMKKQTRQQEEHGSEVASLELDLHGAETRCRDARRRVDLLRDSRETVAVLAVSAYRRRRQGMTLAGAAAEEGRPGGDAPSLVLRWCFWGWARVAHGGCAAVAKRATRAEAEKELPGVREQLLVAVERARGAMAERDRHRATSEDLAEQIKHFTADLENARTALSATKSMASSARDRCIHLGAARLHKTLERTRCDRLARAFAVWVDPGREFPSPPRTQHNNAFFSPHKDDTTTSGTFPGETQGPSQQQQGDAQPRPQAPEARSSEAARTDNPRGGAPTADSIF-VSYSSAPVSGAGSKQGATRKSDVGRKREYFVSSQGNEGDGA----TPSVVESNGEATPNRRDAVTD--SDAMANNERT-SPLVSTLIDSIPAAVSYKPSNNQD-----CSRDCVSGSFPFPVTTFTTAPTAALRAIASQPAAFRTKANAHSCNKNSGGSIPVPACNGRSSGCGWSADPDLPRVVLSSRAAVGQELYAVGESLLRCVEADHREIHGRPYRPIPITPAEREQFRVCLEDAARGPLRRAVLTFLRVQESYRAVATERDRDSVDSSRQGRRGGHSRGLESRVKGWASDGGGGGFC------GPRCKSTRDAEERQYEVFSLTTGPLSSPAEKARAARVLRDRLVPILEDADEAWGRQRRPWQKMPPSGGGRATAASGFSRGQRRKTAATKERNIPRCLHRGW--ERKMPSRESRRVCLLDSGAGPRKFWETVAGPRFVEASWNLDVKALEQQLWDLAMLVRGQD 3093
MEREL +++K SL ES+ALREKFQ+DLEC+QQDAQRRLVE KAKWKEH L E EKADAI QAE LQ+QL+ SA EV +ARER+FQLESEAQSIRSSPPQVVERADP V E+M+LR+K+AA +EQARRAQR AAEA+EAVGRESAINQGFQRDVDNARHRLLTVQGSLAELSEENA LRRELENERIKTVAGSRRLADAV RQD+A +EVRRDS QLREQRDRLAQD+A+LGIKLHQ++KK AA RLLHAL RH SLA ALRAL+V VTNDIH+KKQTRQQEEH SEVASLE D+ GAETRCR+ARR +D LRDSRETV+ L V A RR QGM +AGAAAEE +PGGDA +LV+RWCFWGWARVA GGC AVAK+A R EAEKEL G RE LL A E AR A AE ++H AT+E LAEQIK TA+LE ARTAL A KS ASSAR RCI LGAAR+ K LER R DRLA+ F+ WVD GR FP P T+ + A P + S T G QG +QQQ GDA ARS + G PTADS + S SG QG + + + + V+S +EG GA PSV SN + NRRDA TD +D MA+N T +PL + I S P S+K +NQD CS V G +P P TT+ L +S+PAA ++ SG S PV G GW A+PDLPR+VLS RAAVG+ELYAVGE LLRCVEAD+RE HGR Y P+PITPAEREQFRVCLEDAARG LRRAVLTFLRVQES+RA A E+DR +V+ +RQGRR RV GW G G R KS R+AEE Q + SLTTGPLS+ AEKARAARVLRDRLVP+LE+A +AWGR R+PWQ P + G RA S SR QRR T +T+++N P L RG E + S R+C LDSGAGPRKFWE VAGPR VEASWN+D+KALEQQLWDLAMLVRG D
Sbjct: 1 MERELEAQMKDSLAESQALREKFQDDLECMQQDAQRRLVEEKAKWKEHILRAEGEKADAIQQAEFLQEQLITSANEVWIARERIFQLESEAQSIRSSPPQVVERADPAAVAEVMRLRDKVAARDEQARRAQRAAAEAQEAVGRESAINQGFQRDVDNARHRLLTVQGSLAELSEENAGLRRELENERIKTVAGSRRLADAVDRQDNALAEVRRDSAQLREQRDRLAQDSAILGIKLHQLRKKQAARRLLHALYLARHRSLATALRALVVRVTNDIHLKKQTRQQEEHASEVASLEADVQGAETRCRNARRGLDALRDSRETVSRLTVKACWRRHQGMVIAGAAAEEEKPGGDASALVVRWCFWGWARVAQGGCTAVAKKARRVEAEKELAGARELLLAADENARCAEAEHNQHLATAEALAEQIKQRTAELEVARTALGAAKSTASSARGRCIRLGAARVLKVLERNRRDRLAQTFSCWVDAGRVFPVVPSTEEDIASLGPQEGRRVVSETCAGHRQGLAQQQ-GDAL-------ARSRDGF-------GPPTADSTTDLCALSTTTSGGRGAQGGMHTAGIDEDKGFVVASTEDEGGGAHLDALPSVAASNDRSRDNRRDAHTDGVNDTMASNGNTPAPLDVSSIPSTPVTASHKRPSNQDQRTPRCSSLFVDG-YPSPGRRSTTS----LSTASSKPAASKSSI--------SGASNPVSGPGGS----GWPANPDLPRLVLSLRAAVGEELYAVGERLLRCVEADYRETHGRSYHPVPITPAEREQFRVCLEDAARGRLRRAVLTFLRVQESHRAAAVEKDRGNVEKTRQGRR--------VRVNGWTCGGXXXXXXXXXCLRGARRKSARNAEEGQDGISSLTTGPLSTTAEKARAARVLRDRLVPLLENAADAWGRHRQPWQNTPRAVGRRAATESDKSRFQRRTTVSTRQKNNPHRLRRGNGDETGLSSPGRGRLCCLDSGAGPRKFWEAVAGPRLVEASWNVDIKALEQQLWDLAMLVRGPD 989
BLAST of mRNA_P-lacustris_contig1145.1125.1 vs. uniprot
Match: A0A6H5L397_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L397_9PHAE) HSP 1 Score: 914 bits (2362), Expect = 0.000e+0 Identity = 583/969 (60.17%), Postives = 669/969 (69.04%), Query Frame = 1
Query: 319 MFQLESEAQSIRSSPPQVVERADPGTVVEIMQLREKMAATEEQARRAQRTAAEAREAVGRESAINQGFQRDVDNARHRLLTVQGSLAELSEENAKLRRELENERIKTVAGSRRLADAVQRQDDARSEVRRDSVQLREQRDRLAQDTAVLGIKLHQMKKKHAAGRLLHALSQTRHCSLARALRALIVGVTNDIHMKKQTRQQEEHGSEVASLELDLHGAETRCRDARRRVDLLRDSRETVAVLAVSAYRRRRQGMTLAGAAAEEGRPGGDAPSLVLRWCFWGWARVAHGGCAAVAKRATRAEAEKELPGVREQLLVAVERARGAMAERDRHRATSEDLAEQIKHFTADLENARTALSATKSMASSARDRCIHLGAARLHKTLERTRCDRLARAFAVWVDPGREFPSPPRTQHNNAFFSPHKDDTTTSGTFPGETQGPSQQQQGDAQPRPQAPEARSSEAARTDNPRGGAPTADSI-FVSYSSAPVSGAGSKQGATRKSDVGRKREYFVSSQGNEGDGA----TPSVVESNGEATPNRRDAVTD--SDAMANNERT-SPLVSTLIDSIPAAVSYK-PSNNQDCSRDCVS---GSFPFPVTTFTTAPTAALRAIASQPAAFRTKANAHSCNKNSGGSIPVPACNGRSSGCGWSADPDLPRVVLSSRAAVGQELYAVGESLLRCVEADHREIHGRPYRPIPITPAEREQFRVCLEDAARGPLRRAVLTFLRVQESYRAVATERDRDSVDSSRQGRRGGHSRGLESRVKGWASDGGGG----GFC--GPRCKSTRDAEERQYEVFSLTTGPLSSPAEKARAARVLRDRLVPILEDADEAWGRQRRPWQKMPPSGGGRATAASGFSRGQRRKTAATKERNIPRCLHRGW--ERKMPSRESRRVCLLDSGAGPRKFWETVAGPRFVEASWNLDVKALEQQLWDLAMLVRGQDEENRGKAGHRHGLALNRCERLRRT 3165
MFQLESEAQS+RSSPPQVVERADP V E+M+LR+K+AA +EQARRAQR AAEA+EAVGRESAINQGFQRDVDNARHRLLTVQGSLAELSEENA LRRELE+ERIKTV+GSRRLADAV+RQD+A +EVRRDS QLREQRDR +D+A+LGIKLHQ++KK AAGRLLHAL RH SLA ALRAL+V VTNDIH+KK GAETRCRDARRR+D LRD+RETV+ L V A RR QGM +AGAAAEE +PGGDA +LV+RWCFWGWARVA GGC VAK+A R EAEKEL G RE LL A E AR A AE ++H AT LAEQIK TA+LE ARTAL A KS ASSAR RCI LGAAR+ K L R R DRLA+ F+ WVD GR FP P + A P + S T G QG +QQQ GDA A S + G P ADS + S SG QG +D+G + + V+S +EG GA PSV SN + N RDA T+ + MA+N T +PL + I S P A S+K PSN + C S G +P P TT+ L +S+PAA ++ SG S PVP G GWSA+PDLPR+VLS RAAVG+ELYAVGE LLRCVEADHREIHG+ Y P+PITPAEREQF VCLEDAARG LRRAVLTFLRVQES+RA A E+DR +V+ +RQGRR R+ GW GGG G C G R KS R+AEE Q E+ SLTTGPLS+P+EKARAARVLRDRLVP+LE+A +AWGR R+PWQ MP + G RA S SR QRR T +T+++N P L RG E + S R+C LDSGAGPRKFWETVAGPR VEASWN+D+KALEQQLWDLAMLVRG D RG GLALNRCE LRRT
Sbjct: 1 MFQLESEAQSMRSSPPQVVERADPAAVAEVMRLRDKVAARDEQARRAQRAAAEAQEAVGRESAINQGFQRDVDNARHRLLTVQGSLAELSEENAGLRRELESERIKTVSGSRRLADAVERQDNALAEVRRDSAQLREQRDR--RDSAMLGIKLHQLRKKQAAGRLLHALDLARHRSLATALRALVVRVTNDIHLKK--------------------GAETRCRDARRRLDALRDTRETVSRLTVKACWRRHQGMVIAGAAAEEEKPGGDASALVVRWCFWGWARVAQGGCTVVAKKARRVEAEKELTGARELLLAADENARRAEAEHNQHLATVGALAEQIKQRTAELEVARTALDAAKSTASSARGRCIRLGAARVLKVLARNRRDRLAQTFSCWVDAGRVFPVVPSNEEVIASLGPQQGRRAVSETCAGHRQGLAQQQ-GDAP-------AESRDGF-------GPPKADSTTHLCALSTTTSGGRGAQGGAHTADMGEDKGFVVASTEDEGGGAYLDALPSVAASNDPSRDNSRDAHTNGVNGTMASNGNTPAPLDISSIPSTPVAASHKRPSNQHQGTPRCSSLFVGGYPSPGRRSTTS----LSTASSKPAAAKSNI--------SGASNPVPVPGGS----GWSANPDLPRLVLSLRAAVGEELYAVGERLLRCVEADHREIHGKLYHPVPITPAEREQFHVCLEDAARGRLRRAVLTFLRVQESHRAAAVEKDRGNVEKTRQGRR--------VRMNGWTCGGGGXXXXXGGCLRGARPKSARNAEEGQDEISSLTTGPLSTPSEKARAARVLRDRLVPLLENAADAWGRHRQPWQNMPRAVGRRAATESDTSRFQRRTTVSTRQQNNPHRLRRGNGDETGLSSPRRGRLCCLDSGAGPRKFWETVAGPRLVEASWNVDIKALEQQLWDLAMLVRGPDL--RGHCERHQGLALNRCELLRRT 906
BLAST of mRNA_P-lacustris_contig1145.1125.1 vs. uniprot
Match: A0A836CC54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC54_9STRA) HSP 1 Score: 130 bits (326), Expect = 8.600e-27 Identity = 111/328 (33.84%), Postives = 171/328 (52.13%), Query Frame = 1
Query: 52 STKLGRMERELASEIKGSLEESRALREKFQEDLECVQQDAQ-------RRLVERKAKWKEHALCMEQEKADAILQAELLQQQLVDSAREVRLARERMFQLESEAQSIRSSPPQVVERADPGTVVEIMQLREKMAATEEQARRAQRTAAEAREAVGRESAINQGFQRDVDNARHRLLTVQGSLAELSEENAKLRRELENERIKTVAGSRRLADAVQRQDDARSEVRRDSVQLREQRDRLAQDTAVLGIKLHQMKKKHAAGRLLHALSQTRHCSLARALRALIVGVTNDIHMKKQTRQQEEHGSEVASLELDLHGAETRCRDARRRVDLL 1014
+ +L R+E LA +++ LEE+ + +E + +Q +A+ RR ++ K E + + +A +AE LQ QLV + ++RL+R+R LES ++ PPQ VER DP +I QLR+K++ TE R QR A ++ EA+GRE A QRD+D ARH+LLT+QGSLAE + EN L RELE ER++ VA RR A++ + A + R + LR QRD + A +L ++ + AA R+L A ++ A AL + ++ + + +E + AE RC RRR + L
Sbjct: 5 AAQLLRLEHALAEQVQEDLEEAAISQAHHEEVVSKLQAEAEAAVSREHRRHRSKETKLHEALKRVARSRAALQREAEALQDQLVLVSAQLRLSRQRSLDLESAMGELKLRPPQQVERPDPDAAFQIAQLRDKLSGTETALRECQREARDSAEALGRERAAGLALQRDLDAARHKLLTLQGSLAEGARENGALMRELEAERVRAVAQQRRAAESEEALAAALAAARAAADGLRSQRDAFCEAAATSAARLRRLSRAEAARRVLQACARRTAAVRAAALHRWSLNAALSAAADQRRVMEAQRRAEAEAQVDAAESAERRCLALRRRCEEL 332
BLAST of mRNA_P-lacustris_contig1145.1125.1 vs. uniprot
Match: A0A6H5KVN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVN0_9PHAE) HSP 1 Score: 51.6 bits (122), Expect = 5.740e-5 Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 1
Query: 94 IKGSLEESRALREKFQEDLECVQQDAQRRLVERK 195
+K SL ES+ALREKFQ DLEC+QQDAQRRLVE K
Sbjct: 4 MKDSLAESQALREKFQHDLECMQQDAQRRLVEEK 37 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1145.1125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1145.1125.1 >prot_P-lacustris_contig1145.1125.1 ID=prot_P-lacustris_contig1145.1125.1|Name=mRNA_P-lacustris_contig1145.1125.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=1055bp MSPTDVYMHAAGNHASLSTKLGRMERELASEIKGSLEESRALREKFQEDLback to top mRNA from alignment at P-lacustris_contig1145:52859..60229+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1145.1125.1 ID=mRNA_P-lacustris_contig1145.1125.1|Name=mRNA_P-lacustris_contig1145.1125.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=7371bp|location=Sequence derived from alignment at P-lacustris_contig1145:52859..60229+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1145:52859..60229+ >mRNA_P-lacustris_contig1145.1125.1 ID=mRNA_P-lacustris_contig1145.1125.1|Name=mRNA_P-lacustris_contig1145.1125.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=6330bp|location=Sequence derived from alignment at P-lacustris_contig1145:52859..60229+ (Pleurocladia lacustris SAG_25_93)back to top |